Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:29:53 (266913): wrapper (7.7.26015): starting
22:29:53 (266913): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 22:29:53] Arguments: --nthreads 4
[2024-06-21 22:29:53] Threads: 4
[2024-06-21 22:29:53] Checking for CVMFS
[2024-06-21 22:29:53] No cvmfs_config command found, will try listing directly
[2024-06-21 22:29:53] CVMFS is ok
[2024-06-21 22:29:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 22:29:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 22:29:53] Further information can be found at the LHC@home message board.
[2024-06-21 22:29:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 22:29:53] Checking for apptainer binary...
[2024-06-21 22:29:53] which: no apptainer in ((null))
[2024-06-21 22:29:53] apptainer is not installed, using version from CVMFS
[2024-06-21 22:29:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 22:29:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-06-21 22:29:54] apptainer works
[2024-06-21 22:29:54] Set ATHENA_PROC_NUMBER=4
[2024-06-21 22:29:54] Set ATHENA_CORE_NUMBER=4
[2024-06-21 22:29:54] Starting ATLAS job with PandaID=6238842652
[2024-06-21 22:29:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 02:55:33]  *** The last 200 lines of the pilot log: ***
[2024-06-22 02:55:33] 2024-06-22 00:55:10,111 | INFO     | fitting pss+swap vs Time
[2024-06-22 02:55:33] 2024-06-22 00:55:10,111 | INFO     | model: linear, x: [1719001844.0, 1719001905.0, 1719001966.0, 1719002027.0, 1719002088.0, 1719002149.0, 1719002210.0, 1719002271.0, 1719002332.0, 1719002393.0, 1719
[2024-06-22 02:55:33] 2024-06-22 00:55:10,111 | INFO     | sum of square deviations: 5449944045.0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,112 | INFO     | sum of deviations: 60467842954.00003
[2024-06-22 02:55:33] 2024-06-22 00:55:10,112 | INFO     | mean x: 1719009743.5
[2024-06-22 02:55:33] 2024-06-22 00:55:10,112 | INFO     | mean y: 2351636.9384615384
[2024-06-22 02:55:33] 2024-06-22 00:55:10,112 | INFO     | -- intersect: -19070286604.497623
[2024-06-22 02:55:33] 2024-06-22 00:55:10,112 | INFO     | intersect: -19070286604.497623
[2024-06-22 02:55:33] 2024-06-22 00:55:10,113 | INFO     | chi2: 3.7573512652055876
[2024-06-22 02:55:33] 2024-06-22 00:55:10,113 | INFO     | model: linear, x: [1719001844.0, 1719001905.0, 1719001966.0, 1719002027.0, 1719002088.0, 1719002149.0, 1719002210.0, 1719002271.0, 1719002332.0, 1719002393.0, 1719
[2024-06-22 02:55:33] 2024-06-22 00:55:10,113 | INFO     | sum of square deviations: 5141528960.0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,114 | INFO     | sum of deviations: 58992083679.000015
[2024-06-22 02:55:33] 2024-06-22 00:55:10,114 | INFO     | mean x: 1719009591.0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,114 | INFO     | mean y: 2350907.1411764706
[2024-06-22 02:55:33] 2024-06-22 00:55:10,114 | INFO     | -- intersect: -19720956775.497177
[2024-06-22 02:55:33] 2024-06-22 00:55:10,114 | INFO     | intersect: -19720956775.497177
[2024-06-22 02:55:33] 2024-06-22 00:55:10,114 | INFO     | chi2: 3.760545995777949
[2024-06-22 02:55:33] 2024-06-22 00:55:10,114 | INFO     | current chi2=3.760545995777949 (change=-0.08502613535087228 %)
[2024-06-22 02:55:33] 2024-06-22 00:55:10,114 | INFO     | right removable region: 254
[2024-06-22 02:55:33] 2024-06-22 00:55:10,115 | INFO     | model: linear, x: [1719002149.0, 1719002210.0, 1719002271.0, 1719002332.0, 1719002393.0, 1719002454.0, 1719002515.0, 1719002576.0, 1719002637.0, 1719002698.0, 1719
[2024-06-22 02:55:33] 2024-06-22 00:55:10,115 | INFO     | sum of square deviations: 5141528960.0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | sum of deviations: 2832523288.0000153
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | mean x: 1719009896.0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | mean y: 2380053.098039216
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | -- intersect: -944640881.8423883
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | intersect: -944640881.8423883
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | chi2: 1.4588324832135624
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | current chi2=1.4588324832135624 (change=61.17391267825101 %)
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | model: linear, x: [1719002454.0, 1719002515.0, 1719002576.0, 1719002637.0, 1719002698.0, 1719002759.0, 1719002820.0, 1719002881.0, 1719002942.0, 1719003003.0, 1719
[2024-06-22 02:55:33] 2024-06-22 00:55:10,116 | INFO     | sum of square deviations: 4844974562.5
[2024-06-22 02:55:33] 2024-06-22 00:55:10,117 | INFO     | sum of deviations: -39905111607.50001
[2024-06-22 02:55:33] 2024-06-22 00:55:10,118 | INFO     | mean x: 1719010048.5
[2024-06-22 02:55:33] 2024-06-22 00:55:10,118 | INFO     | mean y: 2402030.996
[2024-06-22 02:55:33] 2024-06-22 00:55:10,118 | INFO     | -- intersect: 14160843309.666077
[2024-06-22 02:55:33] 2024-06-22 00:55:10,118 | INFO     | intersect: 14160843309.666077
[2024-06-22 02:55:33] 2024-06-22 00:55:10,118 | INFO     | chi2: 0.29262789735595846
[2024-06-22 02:55:33] 2024-06-22 00:55:10,118 | INFO     | current chi2=0.29262789735595846 (change=79.94095273287661 %)
[2024-06-22 02:55:33] 2024-06-22 00:55:10,118 | INFO     | model: linear, x: [1719002759.0, 1719002820.0, 1719002881.0, 1719002942.0, 1719003003.0, 1719003064.0, 1719003125.0, 1719003186.0, 1719003247.0, 1719003308.0, 1719
[2024-06-22 02:55:33] 2024-06-22 00:55:10,118 | INFO     | sum of square deviations: 4560048290.0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,119 | INFO     | sum of deviations: -41382531272.00001
[2024-06-22 02:55:33] 2024-06-22 00:55:10,119 | INFO     | mean x: 1719010201.0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,119 | INFO     | mean y: 2402773.0204081633
[2024-06-22 02:55:33] 2024-06-22 00:55:10,119 | INFO     | -- intersect: 15602455420.657944
[2024-06-22 02:55:33] 2024-06-22 00:55:10,119 | INFO     | intersect: 15602455420.657944
[2024-06-22 02:55:33] 2024-06-22 00:55:10,120 | INFO     | chi2: 0.24219872741563483
[2024-06-22 02:55:33] 2024-06-22 00:55:10,120 | INFO     | current chi2=0.24219872741563483 (change=17.233206538398 %)
[2024-06-22 02:55:33] 2024-06-22 00:55:10,120 | INFO     | left removable region: 30
[2024-06-22 02:55:33] 2024-06-22 00:55:10,120 | INFO     | model: linear, x: [1719003674.0, 1719003735.0, 1719003796.0, 1719003857.0, 1719003918.0, 1719003979.0, 1719004040.0, 1719004101.0, 1719004162.0, 1719004223.0, 1719
[2024-06-22 02:55:33] 2024-06-22 00:55:10,120 | INFO     | sum of square deviations: 3485088600.0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,121 | INFO     | sum of deviations: -16847435212.5
[2024-06-22 02:55:33] 2024-06-22 00:55:10,121 | INFO     | mean x: 1719010475.5
[2024-06-22 02:55:33] 2024-06-22 00:55:10,121 | INFO     | mean y: 2388435.78125
[2024-06-22 02:55:33] 2024-06-22 00:55:10,121 | INFO     | -- intersect: 8312340043.781996
[2024-06-22 02:55:33] 2024-06-22 00:55:10,121 | INFO     | intersect: 8312340043.781996
[2024-06-22 02:55:33] 2024-06-22 00:55:10,121 | INFO     | chi2: 0.16572581264069394
[2024-06-22 02:55:33] 2024-06-22 00:55:10,121 | INFO     | -- intersect: 8312340043.781996
[2024-06-22 02:55:33] 2024-06-22 00:55:10,121 | INFO     | current memory leak: -4.83 B/s (using 224 data points, chi2=0.17)
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | ..............................
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | . Timing measurements:
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | . get job = 0 s
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | . initial setup = 1 s
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | . payload setup = 8 s
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | . stage-in = 0 s
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | . payload execution = 15860 s
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | . stage-out = 1 s
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | . log creation = 0 s
[2024-06-22 02:55:33] 2024-06-22 00:55:10,122 | INFO     | ..............................
[2024-06-22 02:55:33] 2024-06-22 00:55:10,552 | INFO     | 
[2024-06-22 02:55:33] 2024-06-22 00:55:10,552 | INFO     | job summary report
[2024-06-22 02:55:33] 2024-06-22 00:55:10,552 | INFO     | --------------------------------------------------
[2024-06-22 02:55:33] 2024-06-22 00:55:10,552 | INFO     | PanDA job id: 6238842652
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | task id: 40024049
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | errors: (none)
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | pilot state: finished 
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | transexitcode: 0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | exeerrorcode: 0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | exeerrordiag: 
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | exitcode: 0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | exitmsg: OK
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | cpuconsumptiontime: 60288 s
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | nevents: 400
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | neventsw: 0
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | pid: 279314
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | pgrp: 279314
[2024-06-22 02:55:33] 2024-06-22 00:55:10,553 | INFO     | corecount: 4
[2024-06-22 02:55:33] 2024-06-22 00:55:10,554 | INFO     | event service: False
[2024-06-22 02:55:33] 2024-06-22 00:55:10,554 | INFO     | sizes: {0: 2386703, 1: 2386902, 8: 2387108, 11: 2387136, 15873: 2418169, 15874: 2427151, 15875: 2427335, 15883: 2427505}
[2024-06-22 02:55:33] 2024-06-22 00:55:10,554 | INFO     | --------------------------------------------------
[2024-06-22 02:55:33] 2024-06-22 00:55:10,554 | INFO     | 
[2024-06-22 02:55:33] 2024-06-22 00:55:10,554 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-06-22 02:55:33] 2024-06-22 00:55:10,577 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,577 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,577 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,577 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,578 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 02:55:33] 2024-06-22 00:55:10,579 | INFO     | job 6238842652 has completed (purged errors)
[2024-06-22 02:55:33] 2024-06-22 00:55:10,579 | INFO     | overall cleanup function is called
[2024-06-22 02:55:33] 2024-06-22 00:55:11,586 | INFO     | --- collectZombieJob: --- 10, [279314]
[2024-06-22 02:55:33] 2024-06-22 00:55:11,586 | INFO     | zombie collector waiting for pid 279314
[2024-06-22 02:55:33] 2024-06-22 00:55:11,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 02:55:33] 2024-06-22 00:55:12,591 | INFO     | collected zombie processes
[2024-06-22 02:55:33] 2024-06-22 00:55:12,591 | INFO     | will now attempt to kill all subprocesses of pid=279314
[2024-06-22 02:55:33] 2024-06-22 00:55:12,789 | INFO     | process IDs to be killed: [279314] (in reverse order)
[2024-06-22 02:55:33] 2024-06-22 00:55:12,923 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 02:55:33] 2024-06-22 00:55:12,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 02:55:33] 2024-06-22 00:55:12,933 | INFO     | did not find any defunct processes belonging to 279314
[2024-06-22 02:55:33] 2024-06-22 00:55:12,941 | INFO     | did not find any defunct processes belonging to 279314
[2024-06-22 02:55:33] 2024-06-22 00:55:12,942 | INFO     | ready for new job
[2024-06-22 02:55:33] 2024-06-22 00:55:12,942 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 02:55:33] 2024-06-22 00:55:12,944 | INFO     | *************************************
[2024-06-22 02:55:33] 2024-06-22 00:55:12,944 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 02:55:33] 2024-06-22 00:55:12,945 | INFO     | *************************************
[2024-06-22 02:55:33] 2024-06-22 00:55:12,945 | INFO     | 
[2024-06-22 02:55:33] 2024-06-22 00:55:12,949 | INFO     | architecture information:
[2024-06-22 02:55:33] 2024-06-22 00:55:12,949 | INFO     | executing command: cat /etc/os-release
[2024-06-22 02:55:33] 2024-06-22 00:55:12,968 | INFO     | cat /etc/os-release:
[2024-06-22 02:55:33] NAME="CentOS Linux"
[2024-06-22 02:55:33] VERSION="7 (Core)"
[2024-06-22 02:55:33] ID="centos"
[2024-06-22 02:55:33] ID_LIKE="rhel fedora"
[2024-06-22 02:55:33] VERSION_ID="7"
[2024-06-22 02:55:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 02:55:33] ANSI_COLOR="0;31"
[2024-06-22 02:55:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 02:55:33] HOME_URL="https://www.centos.org/"
[2024-06-22 02:55:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 02:55:33] 
[2024-06-22 02:55:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 02:55:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 02:55:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 02:55:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 02:55:33] 
[2024-06-22 02:55:33] 2024-06-22 00:55:12,968 | INFO     | *************************************
[2024-06-22 02:55:33] 2024-06-22 00:55:13,471 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-06-22 02:55:33] 2024-06-22 00:55:13,492 | INFO     | sufficient remaining disk space (652245729280 B)
[2024-06-22 02:55:33] 2024-06-22 00:55:13,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 02:55:33] 2024-06-22 00:55:13,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 02:55:33] 2024-06-22 00:55:13,573 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 02:55:33] 2024-06-22 00:55:13,573 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 02:55:33] 2024-06-22 00:55:13,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 02:55:33] 2024-06-22 00:55:13,573 | INFO     | will abort loop
[2024-06-22 02:55:33] 2024-06-22 00:55:13,928 | INFO     | all payload control threads have been joined
[2024-06-22 02:55:33] 2024-06-22 00:55:13,934 | INFO     | all data control threads have been joined
[2024-06-22 02:55:33] 2024-06-22 00:55:13,971 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 02:55:33] 2024-06-22 00:55:13,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 02:55:33] 2024-06-22 00:55:13,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 02:55:33] 2024-06-22 00:55:14,498 | INFO     | [job] retrieve thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:14,547 | INFO     | [job] validate thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:14,553 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:14,578 | INFO     | [job] job monitor thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:14,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 02:55:33] 2024-06-22 00:55:14,718 | INFO     | all job control threads have been joined
[2024-06-22 02:55:33] 2024-06-22 00:55:14,900 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:14,933 | INFO     | [payload] control thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:14,939 | INFO     | [data] control thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:14,948 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:15,077 | INFO     | [payload] failed_post thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:15,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 02:55:33] 2024-06-22 00:55:15,549 | INFO     | [payload] validate_post thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:15,723 | INFO     | [job] control thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:15,833 | INFO     | [data] copytool_in thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:16,192 | INFO     | [job] queue monitor thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:16,602 | INFO     | [data] copytool_out thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:16,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 02:55:33] 2024-06-22 00:55:20,903 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:24,393 | INFO     | job.realtimelogging is not enabled
[2024-06-22 02:55:33] 2024-06-22 00:55:25,398 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 02:55:33] 2024-06-22 00:55:27,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47321152816192)>', '<ExcThread(monitor, started 47321335191296)>']
[2024-06-22 02:55:33] 2024-06-22 00:55:28,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 02:55:33] 2024-06-22 00:55:28,042 | INFO     | [monitor] control thread has ended
[2024-06-22 02:55:33] 2024-06-22 00:55:32,102 | INFO     | all workflow threads have been joined
[2024-06-22 02:55:33] 2024-06-22 00:55:32,102 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 02:55:33] 2024-06-22 00:55:32,102 | INFO     | traces error code: 0
[2024-06-22 02:55:33] 2024-06-22 00:55:32,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 02:55:33] 2024-06-22 00:55:32,235 [wrapper] ==== pilot stdout END ====
[2024-06-22 02:55:33] 2024-06-22 00:55:32,238 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 02:55:33] 2024-06-22 00:55:32,240 [wrapper] pilotpid: 271570
[2024-06-22 02:55:33] 2024-06-22 00:55:32,243 [wrapper] Pilot exit status: 0
[2024-06-22 02:55:33] 2024-06-22 00:55:32,261 [wrapper] pandaids: 6238842652
[2024-06-22 02:55:33] 2024-06-22 00:55:32,334 [wrapper] cleanup supervisor_pilot  865069 271571
[2024-06-22 02:55:33] 2024-06-22 00:55:32,336 [wrapper] Test setup, not cleaning
[2024-06-22 02:55:33] 2024-06-22 00:55:32,338 [wrapper] ==== wrapper stdout END ====
[2024-06-22 02:55:33] 2024-06-22 00:55:32,340 [wrapper] ==== wrapper stderr END ====
[2024-06-22 02:55:33] 2024-06-22 00:55:32,344 [wrapper] apfmon messages muted
[2024-06-22 02:55:33]  *** Error codes and diagnostics ***
[2024-06-22 02:55:33]     "exeErrorCode": 0,
[2024-06-22 02:55:33]     "exeErrorDiag": "",
[2024-06-22 02:55:33]     "pilotErrorCode": 0,
[2024-06-22 02:55:33]     "pilotErrorDiag": "",
[2024-06-22 02:55:33]  *** Listing of results directory ***
[2024-06-22 02:55:33] total 875912
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc    469766 Jun 20 12:57 pilot3.tar.gz
[2024-06-22 02:55:33] -rwx------ 1 boinc boinc     32308 Jun 20 13:17 runpilot2-wrapper.sh
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:17 queuedata.json
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc       100 Jun 21 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 02:55:33] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 22:29 run_atlas
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc       105 Jun 21 22:29 job.xml
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc      6661 Jun 21 22:29 init_data.xml
[2024-06-22 02:55:33] -rw-r--r-- 2 boinc boinc 614829801 Jun 21 22:29 EVNT.40024047._000006.pool.root.1
[2024-06-22 02:55:33] -rw-r--r-- 2 boinc boinc     17537 Jun 21 22:29 start_atlas.sh
[2024-06-22 02:55:33] drwxrwx--x 2 boinc boinc      4096 Jun 21 22:29 shared
[2024-06-22 02:55:33] -rw-r--r-- 2 boinc boinc    482476 Jun 21 22:29 input.tar.gz
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc         0 Jun 21 22:29 boinc_lockfile
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc      2491 Jun 21 22:29 pandaJob.out
[2024-06-22 02:55:33] -rw------- 1 boinc boinc       424 Jun 21 22:29 setup.sh.local
[2024-06-22 02:55:33] -rw------- 1 boinc boinc   1025632 Jun 21 22:30 agis_schedconf.cvmfs.json
[2024-06-22 02:55:33] -rw------- 1 boinc boinc   1321363 Jun 21 22:30 cric_ddmendpoints.json
[2024-06-22 02:55:33] drwx------ 4 boinc boinc      4096 Jun 21 22:30 pilot3
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc       532 Jun 22 02:54 boinc_task_state.xml
[2024-06-22 02:55:33] -rw------- 1 boinc boinc 274702129 Jun 22 02:54 HITS.40024049._000086.pool.root.1
[2024-06-22 02:55:33] -rw------- 1 boinc boinc      1046 Jun 22 02:54 memory_monitor_summary.json
[2024-06-22 02:55:33] -rw------- 1 boinc boinc        95 Jun 22 02:54 pilot_heartbeat.json
[2024-06-22 02:55:33] -rw------- 1 boinc boinc         0 Jun 22 02:55 agis_ddmendpoints.agis.ALL.json
[2024-06-22 02:55:33] -rw------- 1 boinc boinc    351515 Jun 22 02:55 log.40024049._000086.job.log.tgz.1
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc        28 Jun 22 02:55 wrapper_checkpoint.txt
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc      8192 Jun 22 02:55 boinc_mmap_file
[2024-06-22 02:55:33] -rw------- 1 boinc boinc      7753 Jun 22 02:55 heartbeat.json
[2024-06-22 02:55:33] -rw------- 1 boinc boinc      4479 Jun 22 02:55 pilotlog.txt
[2024-06-22 02:55:33] -rw------- 1 boinc boinc   1580792 Jun 22 02:55 log.40024049._000086.job.log.1
[2024-06-22 02:55:33] -rw------- 1 boinc boinc       357 Jun 22 02:55 output.list
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc       620 Jun 22 02:55 runtime_log
[2024-06-22 02:55:33] -rw------- 1 boinc boinc   1955840 Jun 22 02:55 result.tar.gz
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc     11410 Jun 22 02:55 runtime_log.err
[2024-06-22 02:55:33] -rw------- 1 boinc boinc       659 Jun 22 02:55 j7LMDm0xUe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmVlqKDmcFVPtn.diag
[2024-06-22 02:55:33] -rw-r--r-- 1 boinc boinc     21299 Jun 22 02:55 stderr.txt
[2024-06-22 02:55:33] HITS file was successfully produced:
[2024-06-22 02:55:33] -rw------- 1 boinc boinc 274702129 Jun 22 02:54 shared/HITS.pool.root.1
[2024-06-22 02:55:33]  *** Contents of shared directory: ***
[2024-06-22 02:55:33] total 871096
[2024-06-22 02:55:33] -rw-r--r-- 2 boinc boinc 614829801 Jun 21 22:29 ATLAS.root_0
[2024-06-22 02:55:33] -rw-r--r-- 2 boinc boinc     17537 Jun 21 22:29 start_atlas.sh
[2024-06-22 02:55:33] -rw-r--r-- 2 boinc boinc    482476 Jun 21 22:29 input.tar.gz
[2024-06-22 02:55:33] -rw------- 1 boinc boinc 274702129 Jun 22 02:54 HITS.pool.root.1
[2024-06-22 02:55:33] -rw------- 1 boinc boinc   1955840 Jun 22 02:55 result.tar.gz
02:55:34 (266913): run_atlas exited; CPU time 60018.639702
02:55:34 (266913): called boinc_finish(0)

</stderr_txt>
]]>

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