Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:20:44 (529073): wrapper (7.7.26015): starting
18:20:44 (529073): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 18:20:44] Arguments: --nthreads 4
[2024-06-20 18:20:44] Threads: 4
[2024-06-20 18:20:44] Checking for CVMFS
[2024-06-20 18:20:44] No cvmfs_config command found, will try listing directly
[2024-06-20 18:20:44] CVMFS is ok
[2024-06-20 18:20:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 18:20:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 18:20:44] Further information can be found at the LHC@home message board.
[2024-06-20 18:20:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 18:20:44] Checking for apptainer binary...
[2024-06-20 18:20:44] which: no apptainer in ((null))
[2024-06-20 18:20:44] apptainer is not installed, using version from CVMFS
[2024-06-20 18:20:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 18:20:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-06-20 18:20:45] apptainer works
[2024-06-20 18:20:45] Set ATHENA_PROC_NUMBER=4
[2024-06-20 18:20:45] Set ATHENA_CORE_NUMBER=4
[2024-06-20 18:20:45] Starting ATLAS job with PandaID=6238842651
[2024-06-20 18:20:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 23:00:39]  *** The last 200 lines of the pilot log: ***
[2024-06-20 23:00:39] 2024-06-20 21:00:16,755 | INFO     | fitting pss+swap vs Time
[2024-06-20 23:00:39] 2024-06-20 21:00:16,756 | INFO     | model: linear, x: [1718900477.0, 1718900538.0, 1718900599.0, 1718900660.0, 1718900721.0, 1718900782.0, 1718900843.0, 1718900904.0, 1718900965.0, 1718901026.0, 1718
[2024-06-20 23:00:39] 2024-06-20 21:00:16,756 | INFO     | sum of square deviations: 6448679050.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,759 | INFO     | sum of deviations: 74273392172.99997
[2024-06-20 23:00:39] 2024-06-20 21:00:16,759 | INFO     | mean x: 1718908834.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,759 | INFO     | mean y: 2329890.6654545455
[2024-06-20 23:00:39] 2024-06-20 21:00:16,759 | INFO     | -- intersect: -19795397511.71102
[2024-06-20 23:00:39] 2024-06-20 21:00:16,759 | INFO     | intersect: -19795397511.71102
[2024-06-20 23:00:39] 2024-06-20 21:00:16,760 | INFO     | chi2: 4.831861001823282
[2024-06-20 23:00:39] 2024-06-20 21:00:16,760 | INFO     | model: linear, x: [1718900477.0, 1718900538.0, 1718900599.0, 1718900660.0, 1718900721.0, 1718900782.0, 1718900843.0, 1718900904.0, 1718900965.0, 1718901026.0, 1718
[2024-06-20 23:00:39] 2024-06-20 21:00:16,761 | INFO     | sum of square deviations: 6103286527.5
[2024-06-20 23:00:39] 2024-06-20 21:00:16,764 | INFO     | sum of deviations: 90697364501.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,765 | INFO     | mean x: 1718908681.5
[2024-06-20 23:00:39] 2024-06-20 21:00:16,765 | INFO     | mean y: 2337026.9185185186
[2024-06-20 23:00:39] 2024-06-20 21:00:16,765 | INFO     | -- intersect: -25541357591.953987
[2024-06-20 23:00:39] 2024-06-20 21:00:16,765 | INFO     | intersect: -25541357591.953987
[2024-06-20 23:00:39] 2024-06-20 21:00:16,766 | INFO     | chi2: 4.03897190915475
[2024-06-20 23:00:39] 2024-06-20 21:00:16,766 | INFO     | current chi2=4.03897190915475 (change=16.40960061494606 %)
[2024-06-20 23:00:39] 2024-06-20 21:00:16,766 | INFO     | right removable region: 269
[2024-06-20 23:00:39] 2024-06-20 21:00:16,766 | INFO     | model: linear, x: [1718900782.0, 1718900843.0, 1718900904.0, 1718900965.0, 1718901026.0, 1718901087.0, 1718901148.0, 1718901209.0, 1718901270.0, 1718901331.0, 1718
[2024-06-20 23:00:39] 2024-06-20 21:00:16,767 | INFO     | sum of square deviations: 6103286527.5
[2024-06-20 23:00:39] 2024-06-20 21:00:16,770 | INFO     | sum of deviations: 10338865356.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,770 | INFO     | mean x: 1718908986.5
[2024-06-20 23:00:39] 2024-06-20 21:00:16,770 | INFO     | mean y: 2358057.9777777777
[2024-06-20 23:00:39] 2024-06-20 21:00:16,771 | INFO     | -- intersect: -2909445032.1388893
[2024-06-20 23:00:39] 2024-06-20 21:00:16,771 | INFO     | intersect: -2909445032.1388893
[2024-06-20 23:00:39] 2024-06-20 21:00:16,771 | INFO     | chi2: 2.3775653597702897
[2024-06-20 23:00:39] 2024-06-20 21:00:16,771 | INFO     | current chi2=2.3775653597702897 (change=50.7940034104225 %)
[2024-06-20 23:00:39] 2024-06-20 21:00:16,772 | INFO     | model: linear, x: [1718901087.0, 1718901148.0, 1718901209.0, 1718901270.0, 1718901331.0, 1718901392.0, 1718901453.0, 1718901514.0, 1718901575.0, 1718901636.0, 1718
[2024-06-20 23:00:39] 2024-06-20 21:00:16,772 | INFO     | sum of square deviations: 5770452380.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,776 | INFO     | sum of deviations: -40675050466.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,776 | INFO     | mean x: 1718909139.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,776 | INFO     | mean y: 2381432.8981132074
[2024-06-20 23:00:39] 2024-06-20 21:00:16,776 | INFO     | -- intersect: 12118713285.426737
[2024-06-20 23:00:39] 2024-06-20 21:00:16,776 | INFO     | intersect: 12118713285.426737
[2024-06-20 23:00:39] 2024-06-20 21:00:16,777 | INFO     | chi2: 0.9327052364418633
[2024-06-20 23:00:39] 2024-06-20 21:00:16,777 | INFO     | current chi2=0.9327052364418633 (change=60.77057429319305 %)
[2024-06-20 23:00:39] 2024-06-20 21:00:16,777 | INFO     | model: linear, x: [1718901392.0, 1718901453.0, 1718901514.0, 1718901575.0, 1718901636.0, 1718901697.0, 1718901758.0, 1718901819.0, 1718901880.0, 1718901941.0, 1718
[2024-06-20 23:00:39] 2024-06-20 21:00:16,778 | INFO     | sum of square deviations: 5449944045.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,781 | INFO     | sum of deviations: -46389539036.5
[2024-06-20 23:00:39] 2024-06-20 21:00:16,781 | INFO     | mean x: 1718909291.5
[2024-06-20 23:00:39] 2024-06-20 21:00:16,781 | INFO     | mean y: 2384119.1653846153
[2024-06-20 23:00:39] 2024-06-20 21:00:16,781 | INFO     | -- intersect: 14633618682.279474
[2024-06-20 23:00:39] 2024-06-20 21:00:16,782 | INFO     | intersect: 14633618682.279474
[2024-06-20 23:00:39] 2024-06-20 21:00:16,782 | INFO     | chi2: 0.8758447285881321
[2024-06-20 23:00:39] 2024-06-20 21:00:16,782 | INFO     | current chi2=0.8758447285881321 (change=6.09629984180703 %)
[2024-06-20 23:00:39] 2024-06-20 21:00:16,782 | INFO     | left removable region: 30
[2024-06-20 23:00:39] 2024-06-20 21:00:16,783 | INFO     | model: linear, x: [1718902307.0, 1718902368.0, 1718902429.0, 1718902490.0, 1718902551.0, 1718902612.0, 1718902673.0, 1718902734.0, 1718902795.0, 1718902856.0, 1718
[2024-06-20 23:00:39] 2024-06-20 21:00:16,783 | INFO     | sum of square deviations: 4233158440.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,786 | INFO     | sum of deviations: -21475076840.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,786 | INFO     | mean x: 1718909566.0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,786 | INFO     | mean y: 2388946.5062761507
[2024-06-20 23:00:39] 2024-06-20 21:00:16,786 | INFO     | -- intersect: 8722524404.2429
[2024-06-20 23:00:39] 2024-06-20 21:00:16,787 | INFO     | intersect: 8722524404.2429
[2024-06-20 23:00:39] 2024-06-20 21:00:16,787 | INFO     | chi2: 0.04091779388544274
[2024-06-20 23:00:39] 2024-06-20 21:00:16,787 | INFO     | -- intersect: 8722524404.2429
[2024-06-20 23:00:39] 2024-06-20 21:00:16,787 | INFO     | current memory leak: -5.07 B/s (using 239 data points, chi2=0.04)
[2024-06-20 23:00:39] 2024-06-20 21:00:16,788 | INFO     | ..............................
[2024-06-20 23:00:39] 2024-06-20 21:00:16,788 | INFO     | . Timing measurements:
[2024-06-20 23:00:39] 2024-06-20 21:00:16,788 | INFO     | . get job = 0 s
[2024-06-20 23:00:39] 2024-06-20 21:00:16,789 | INFO     | . initial setup = 1 s
[2024-06-20 23:00:39] 2024-06-20 21:00:16,789 | INFO     | . payload setup = 4 s
[2024-06-20 23:00:39] 2024-06-20 21:00:16,789 | INFO     | . stage-in = 0 s
[2024-06-20 23:00:39] 2024-06-20 21:00:16,789 | INFO     | . payload execution = 16735 s
[2024-06-20 23:00:39] 2024-06-20 21:00:16,789 | INFO     | . stage-out = 0 s
[2024-06-20 23:00:39] 2024-06-20 21:00:16,789 | INFO     | . log creation = 0 s
[2024-06-20 23:00:39] 2024-06-20 21:00:16,789 | INFO     | ..............................
[2024-06-20 23:00:39] 2024-06-20 21:00:16,852 | INFO     | 
[2024-06-20 23:00:39] 2024-06-20 21:00:16,852 | INFO     | job summary report
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | --------------------------------------------------
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | PanDA job id: 6238842651
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | task id: 40024049
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | errors: (none)
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | pilot state: finished 
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | transexitcode: 0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | exeerrorcode: 0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | exeerrordiag: 
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | exitcode: 0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | exitmsg: OK
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | cpuconsumptiontime: 63612 s
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | nevents: 400
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | neventsw: 0
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | pid: 545124
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | pgrp: 545124
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | corecount: 4
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | event service: False
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | sizes: {0: 2386854, 4: 2387060, 11: 2387088, 16743: 2418801, 16744: 2427839, 16748: 2427953}
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | --------------------------------------------------
[2024-06-20 23:00:39] 2024-06-20 21:00:16,853 | INFO     | 
[2024-06-20 23:00:39] 2024-06-20 21:00:16,854 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/1
[2024-06-20 23:00:39] 2024-06-20 21:00:16,893 | WARNING  | process 545124 is no longer using CPU - aborting
[2024-06-20 23:00:39] 2024-06-20 21:00:16,893 | INFO     | aborting job monitoring since job object (job id=6238842651) has expired
[2024-06-20 23:00:39] 2024-06-20 21:00:16,910 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,910 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,910 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,910 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | job 6238842651 has completed (purged errors)
[2024-06-20 23:00:39] 2024-06-20 21:00:16,911 | INFO     | overall cleanup function is called
[2024-06-20 23:00:39] 2024-06-20 21:00:17,918 | INFO     | --- collectZombieJob: --- 10, [545124]
[2024-06-20 23:00:39] 2024-06-20 21:00:17,918 | INFO     | zombie collector waiting for pid 545124
[2024-06-20 23:00:39] 2024-06-20 21:00:17,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 23:00:39] 2024-06-20 21:00:18,923 | INFO     | collected zombie processes
[2024-06-20 23:00:39] 2024-06-20 21:00:18,923 | INFO     | will now attempt to kill all subprocesses of pid=545124
[2024-06-20 23:00:39] 2024-06-20 21:00:19,100 | INFO     | process IDs to be killed: [545124] (in reverse order)
[2024-06-20 23:00:39] 2024-06-20 21:00:19,200 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 23:00:39] 2024-06-20 21:00:19,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 23:00:39] 2024-06-20 21:00:19,210 | INFO     | did not find any defunct processes belonging to 545124
[2024-06-20 23:00:39] 2024-06-20 21:00:19,219 | INFO     | did not find any defunct processes belonging to 545124
[2024-06-20 23:00:39] 2024-06-20 21:00:19,220 | INFO     | ready for new job
[2024-06-20 23:00:39] 2024-06-20 21:00:19,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 23:00:39] 2024-06-20 21:00:19,222 | INFO     | *************************************
[2024-06-20 23:00:39] 2024-06-20 21:00:19,222 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 23:00:39] 2024-06-20 21:00:19,222 | INFO     | *************************************
[2024-06-20 23:00:39] 2024-06-20 21:00:19,222 | INFO     | 
[2024-06-20 23:00:39] 2024-06-20 21:00:19,227 | INFO     | architecture information:
[2024-06-20 23:00:39] 2024-06-20 21:00:19,227 | INFO     | executing command: cat /etc/os-release
[2024-06-20 23:00:39] 2024-06-20 21:00:19,245 | INFO     | cat /etc/os-release:
[2024-06-20 23:00:39] NAME="CentOS Linux"
[2024-06-20 23:00:39] VERSION="7 (Core)"
[2024-06-20 23:00:39] ID="centos"
[2024-06-20 23:00:39] ID_LIKE="rhel fedora"
[2024-06-20 23:00:39] VERSION_ID="7"
[2024-06-20 23:00:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 23:00:39] ANSI_COLOR="0;31"
[2024-06-20 23:00:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 23:00:39] HOME_URL="https://www.centos.org/"
[2024-06-20 23:00:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 23:00:39] 
[2024-06-20 23:00:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 23:00:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 23:00:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 23:00:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 23:00:39] 
[2024-06-20 23:00:39] 2024-06-20 21:00:19,246 | INFO     | *************************************
[2024-06-20 23:00:39] 2024-06-20 21:00:19,749 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/1
[2024-06-20 23:00:39] 2024-06-20 21:00:19,770 | INFO     | sufficient remaining disk space (654512750592 B)
[2024-06-20 23:00:39] 2024-06-20 21:00:19,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 23:00:39] 2024-06-20 21:00:19,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 23:00:39] 2024-06-20 21:00:19,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 23:00:39] 2024-06-20 21:00:19,871 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 23:00:39] 2024-06-20 21:00:19,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 23:00:39] 2024-06-20 21:00:19,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 23:00:39] 2024-06-20 21:00:19,872 | INFO     | all job control threads have been joined
[2024-06-20 23:00:39] 2024-06-20 21:00:19,892 | INFO     | all payload control threads have been joined
[2024-06-20 23:00:39] 2024-06-20 21:00:20,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 23:00:39] 2024-06-20 21:00:20,402 | INFO     | aborting loop
[2024-06-20 23:00:39] 2024-06-20 21:00:20,433 | INFO     | all data control threads have been joined
[2024-06-20 23:00:39] 2024-06-20 21:00:20,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 23:00:39] 2024-06-20 21:00:20,776 | INFO     | [job] retrieve thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:20,863 | INFO     | [payload] validate_post thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:20,877 | INFO     | [job] control thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:20,897 | INFO     | [payload] control thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:21,193 | INFO     | [payload] failed_post thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:21,407 | INFO     | [job] job monitor thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:21,439 | INFO     | [data] control thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:21,686 | INFO     | [job] validate thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:21,766 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:21,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 23:00:39] 2024-06-20 21:00:21,942 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:22,157 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:22,271 | INFO     | [data] copytool_in thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:22,775 | INFO     | [data] copytool_out thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:22,867 | INFO     | [job] queue monitor thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:23,776 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:30,335 | INFO     | job.realtimelogging is not enabled
[2024-06-20 23:00:39] 2024-06-20 21:00:31,335 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 23:00:39] 2024-06-20 21:00:32,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47597700367424)>', '<ExcThread(monitor, started 47597882742528)>']
[2024-06-20 23:00:39] 2024-06-20 21:00:32,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 23:00:39] 2024-06-20 21:00:32,937 | INFO     | [monitor] control thread has ended
[2024-06-20 23:00:39] 2024-06-20 21:00:37,823 | INFO     | all workflow threads have been joined
[2024-06-20 23:00:39] 2024-06-20 21:00:37,823 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 23:00:39] 2024-06-20 21:00:37,823 | INFO     | traces error code: 0
[2024-06-20 23:00:39] 2024-06-20 21:00:37,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 23:00:39] 2024-06-20 21:00:37,912 [wrapper] ==== pilot stdout END ====
[2024-06-20 23:00:39] 2024-06-20 21:00:37,914 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 23:00:39] 2024-06-20 21:00:37,917 [wrapper] pilotpid: 537890
[2024-06-20 23:00:39] 2024-06-20 21:00:37,919 [wrapper] Pilot exit status: 0
[2024-06-20 23:00:39] 2024-06-20 21:00:37,932 [wrapper] pandaids: 6238842651
[2024-06-20 23:00:39] 2024-06-20 21:00:37,992 [wrapper] cleanup supervisor_pilot 1103604 537891
[2024-06-20 23:00:39] 2024-06-20 21:00:37,994 [wrapper] Test setup, not cleaning
[2024-06-20 23:00:39] 2024-06-20 21:00:37,997 [wrapper] ==== wrapper stdout END ====
[2024-06-20 23:00:39] 2024-06-20 21:00:37,999 [wrapper] ==== wrapper stderr END ====
[2024-06-20 23:00:39] 2024-06-20 21:00:38,002 [wrapper] apfmon messages muted
[2024-06-20 23:00:39]  *** Error codes and diagnostics ***
[2024-06-20 23:00:39]     "exeErrorCode": 0,
[2024-06-20 23:00:39]     "exeErrorDiag": "",
[2024-06-20 23:00:39]     "pilotErrorCode": 0,
[2024-06-20 23:00:39]     "pilotErrorDiag": "",
[2024-06-20 23:00:39]  *** Listing of results directory ***
[2024-06-20 23:00:39] total 872268
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc    469766 Jun 20 12:57 pilot3.tar.gz
[2024-06-20 23:00:39] -rwx------ 1 boinc boinc     32308 Jun 20 13:17 runpilot2-wrapper.sh
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:17 queuedata.json
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc       100 Jun 20 17:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 23:00:39] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 17:25 run_atlas
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc       105 Jun 20 17:25 job.xml
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc      6661 Jun 20 18:20 init_data.xml
[2024-06-20 23:00:39] -rw-r--r-- 2 boinc boinc 614829801 Jun 20 18:20 EVNT.40024047._000006.pool.root.1
[2024-06-20 23:00:39] -rw-r--r-- 2 boinc boinc     17537 Jun 20 18:20 start_atlas.sh
[2024-06-20 23:00:39] drwxrwx--x 2 boinc boinc      4096 Jun 20 18:20 shared
[2024-06-20 23:00:39] -rw-r--r-- 2 boinc boinc    482475 Jun 20 18:20 input.tar.gz
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc         0 Jun 20 18:20 boinc_lockfile
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc      2491 Jun 20 18:20 pandaJob.out
[2024-06-20 23:00:39] -rw------- 1 boinc boinc       424 Jun 20 18:20 setup.sh.local
[2024-06-20 23:00:39] -rw------- 1 boinc boinc   1020792 Jun 20 18:20 agis_schedconf.cvmfs.json
[2024-06-20 23:00:39] -rw------- 1 boinc boinc   1321251 Jun 20 18:20 cric_ddmendpoints.json
[2024-06-20 23:00:39] drwx------ 4 boinc boinc      4096 Jun 20 18:20 pilot3
[2024-06-20 23:00:39] -rw------- 1 boinc boinc 270701268 Jun 20 22:59 HITS.40024049._000085.pool.root.1
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc       532 Jun 20 22:59 boinc_task_state.xml
[2024-06-20 23:00:39] -rw------- 1 boinc boinc        95 Jun 20 22:59 pilot_heartbeat.json
[2024-06-20 23:00:39] -rw------- 1 boinc boinc      1044 Jun 20 23:00 memory_monitor_summary.json
[2024-06-20 23:00:39] -rw------- 1 boinc boinc         0 Jun 20 23:00 agis_ddmendpoints.agis.ALL.json
[2024-06-20 23:00:39] -rw------- 1 boinc boinc    361238 Jun 20 23:00 log.40024049._000085.job.log.tgz.1
[2024-06-20 23:00:39] -rw------- 1 boinc boinc      7749 Jun 20 23:00 heartbeat.json
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc      8192 Jun 20 23:00 boinc_mmap_file
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc        28 Jun 20 23:00 wrapper_checkpoint.txt
[2024-06-20 23:00:39] -rw------- 1 boinc boinc      4293 Jun 20 23:00 pilotlog.txt
[2024-06-20 23:00:39] -rw------- 1 boinc boinc   1707849 Jun 20 23:00 log.40024049._000085.job.log.1
[2024-06-20 23:00:39] -rw------- 1 boinc boinc       357 Jun 20 23:00 output.list
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc       620 Jun 20 23:00 runtime_log
[2024-06-20 23:00:39] -rw------- 1 boinc boinc   2088960 Jun 20 23:00 result.tar.gz
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc     11410 Jun 20 23:00 runtime_log.err
[2024-06-20 23:00:39] -rw------- 1 boinc boinc       657 Jun 20 23:00 7lIMDm0xUe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmUlqKDmhpT23n.diag
[2024-06-20 23:00:39] -rw-r--r-- 1 boinc boinc     21260 Jun 20 23:00 stderr.txt
[2024-06-20 23:00:39] HITS file was successfully produced:
[2024-06-20 23:00:39] -rw------- 1 boinc boinc 270701268 Jun 20 22:59 shared/HITS.pool.root.1
[2024-06-20 23:00:39]  *** Contents of shared directory: ***
[2024-06-20 23:00:39] total 867320
[2024-06-20 23:00:39] -rw-r--r-- 2 boinc boinc 614829801 Jun 20 18:20 ATLAS.root_0
[2024-06-20 23:00:39] -rw-r--r-- 2 boinc boinc     17537 Jun 20 18:20 start_atlas.sh
[2024-06-20 23:00:39] -rw-r--r-- 2 boinc boinc    482475 Jun 20 18:20 input.tar.gz
[2024-06-20 23:00:39] -rw------- 1 boinc boinc 270701268 Jun 20 22:59 HITS.pool.root.1
[2024-06-20 23:00:39] -rw------- 1 boinc boinc   2088960 Jun 20 23:00 result.tar.gz
23:00:40 (529073): run_atlas exited; CPU time 63319.455749
23:00:40 (529073): called boinc_finish(0)

</stderr_txt>
]]>

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