Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:08:40 (3451952): wrapper (7.7.26015): starting
16:08:40 (3451952): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 16:08:40] Arguments: --nthreads 4
[2024-06-21 16:08:40] Threads: 4
[2024-06-21 16:08:40] Checking for CVMFS
[2024-06-21 16:08:40] No cvmfs_config command found, will try listing directly
[2024-06-21 16:08:40] CVMFS is ok
[2024-06-21 16:08:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 16:08:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 16:08:40] Further information can be found at the LHC@home message board.
[2024-06-21 16:08:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 16:08:40] Checking for apptainer binary...
[2024-06-21 16:08:40] which: no apptainer in ((null))
[2024-06-21 16:08:40] apptainer is not installed, using version from CVMFS
[2024-06-21 16:08:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 16:08:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-06-21 16:08:41] apptainer works
[2024-06-21 16:08:41] Set ATHENA_PROC_NUMBER=4
[2024-06-21 16:08:41] Set ATHENA_CORE_NUMBER=4
[2024-06-21 16:08:41] Starting ATLAS job with PandaID=6238842615
[2024-06-21 16:08:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 20:49:19]  *** The last 200 lines of the pilot log: ***
[2024-06-21 20:49:19] 2024-06-21 18:49:05,589 | INFO     | -- intersect: -18355755477.445286
[2024-06-21 20:49:19] 2024-06-21 18:49:05,590 | INFO     | intersect: -18355755477.445286
[2024-06-21 20:49:19] 2024-06-21 18:49:05,590 | INFO     | chi2: 1.5152289667210783
[2024-06-21 20:49:19] 2024-06-21 18:49:05,590 | INFO     | current chi2=1.5152289667210783 (change=60.01303454633572 %)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,590 | INFO     | model: linear, x: [1718979578.0, 1718979639.0, 1718979700.0, 1718979761.0, 1718979822.0, 1718979883.0, 1718979944.0, 1718980005.0, 1718980066.0, 1718980127.0, 1718
[2024-06-21 20:49:19] 2024-06-21 18:49:05,590 | INFO     | sum of square deviations: 5770452380.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,591 | INFO     | sum of deviations: 14165334417.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,591 | INFO     | mean x: 1718987630.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,591 | INFO     | mean y: 2363878.8981132074
[2024-06-21 20:49:19] 2024-06-21 18:49:05,592 | INFO     | -- intersect: -4217415270.832304
[2024-06-21 20:49:19] 2024-06-21 18:49:05,592 | INFO     | intersect: -4217415270.832304
[2024-06-21 20:49:19] 2024-06-21 18:49:05,592 | INFO     | chi2: 0.10137941245134238
[2024-06-21 20:49:19] 2024-06-21 18:49:05,592 | INFO     | current chi2=0.10137941245134238 (change=93.30930079361372 %)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,592 | INFO     | model: linear, x: [1718979883.0, 1718979944.0, 1718980005.0, 1718980066.0, 1718980127.0, 1718980188.0, 1718980249.0, 1718980310.0, 1718980371.0, 1718980432.0, 1718
[2024-06-21 20:49:19] 2024-06-21 18:49:05,592 | INFO     | sum of square deviations: 5449944045.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,593 | INFO     | sum of deviations: 3232010549.499999
[2024-06-21 20:49:19] 2024-06-21 18:49:05,593 | INFO     | mean x: 1718987782.5
[2024-06-21 20:49:19] 2024-06-21 18:49:05,594 | INFO     | mean y: 2369046.2884615385
[2024-06-21 20:49:19] 2024-06-21 18:49:05,594 | INFO     | -- intersect: -1017051814.1144475
[2024-06-21 20:49:19] 2024-06-21 18:49:05,594 | INFO     | intersect: -1017051814.1144475
[2024-06-21 20:49:19] 2024-06-21 18:49:05,594 | INFO     | chi2: 0.0033519647067465253
[2024-06-21 20:49:19] 2024-06-21 18:49:05,594 | INFO     | current chi2=0.0033519647067465253 (change=96.69364358532329 %)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,594 | INFO     | model: linear, x: [1718980188.0, 1718980249.0, 1718980310.0, 1718980371.0, 1718980432.0, 1718980493.0, 1718980554.0, 1718980615.0, 1718980676.0, 1718980737.0, 1718
[2024-06-21 20:49:19] 2024-06-21 18:49:05,594 | INFO     | sum of square deviations: 5141528960.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,595 | INFO     | sum of deviations: 1278850726.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,595 | INFO     | mean x: 1718987935.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,595 | INFO     | mean y: 2370010.231372549
[2024-06-21 20:49:19] 2024-06-21 18:49:05,596 | INFO     | -- intersect: -425193266.32751137
[2024-06-21 20:49:19] 2024-06-21 18:49:05,596 | INFO     | intersect: -425193266.32751137
[2024-06-21 20:49:19] 2024-06-21 18:49:05,596 | INFO     | chi2: 0.0012961584514891893
[2024-06-21 20:49:19] 2024-06-21 18:49:05,596 | INFO     | current chi2=0.0012961584514891893 (change=61.33138129764907 %)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,597 | INFO     | model: linear, x: [1718980493.0, 1718980554.0, 1718980615.0, 1718980676.0, 1718980737.0, 1718980798.0, 1718980859.0, 1718980920.0, 1718980981.0, 1718981042.0, 1718
[2024-06-21 20:49:19] 2024-06-21 18:49:05,597 | INFO     | sum of square deviations: 4844974562.5
[2024-06-21 20:49:19] 2024-06-21 18:49:05,598 | INFO     | sum of deviations: 248994100.50000003
[2024-06-21 20:49:19] 2024-06-21 18:49:05,598 | INFO     | mean x: 1718988087.5
[2024-06-21 20:49:19] 2024-06-21 18:49:05,599 | INFO     | mean y: 2370538.924
[2024-06-21 20:49:19] 2024-06-21 18:49:05,599 | INFO     | -- intersect: -85972111.19642112
[2024-06-21 20:49:19] 2024-06-21 18:49:05,599 | INFO     | intersect: -85972111.19642112
[2024-06-21 20:49:19] 2024-06-21 18:49:05,599 | INFO     | chi2: 0.0006960290097678886
[2024-06-21 20:49:19] 2024-06-21 18:49:05,599 | INFO     | current chi2=0.0006960290097678886 (change=46.30062327887433 %)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,599 | INFO     | model: linear, x: [1718980798.0, 1718980859.0, 1718980920.0, 1718980981.0, 1718981042.0, 1718981103.0, 1718981164.0, 1718981225.0, 1718981286.0, 1718981347.0, 1718
[2024-06-21 20:49:19] 2024-06-21 18:49:05,599 | INFO     | sum of square deviations: 4560048290.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,600 | INFO     | sum of deviations: 18508741.999999873
[2024-06-21 20:49:19] 2024-06-21 18:49:05,600 | INFO     | mean x: 1718988240.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,600 | INFO     | mean y: 2370662.0979591836
[2024-06-21 20:49:19] 2024-06-21 18:49:05,600 | INFO     | -- intersect: -4606524.94301267
[2024-06-21 20:49:19] 2024-06-21 18:49:05,601 | INFO     | intersect: -4606524.94301267
[2024-06-21 20:49:19] 2024-06-21 18:49:05,601 | INFO     | chi2: 0.000661879549644643
[2024-06-21 20:49:19] 2024-06-21 18:49:05,601 | INFO     | current chi2=0.000661879549644643 (change=4.906327127749125 %)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,601 | INFO     | left removable region: 60
[2024-06-21 20:49:19] 2024-06-21 18:49:05,601 | INFO     | model: linear, x: [1718982628.0, 1718982689.0, 1718982750.0, 1718982811.0, 1718982872.0, 1718982933.0, 1718982994.0, 1718983055.0, 1718983116.0, 1718983177.0, 1718
[2024-06-21 20:49:19] 2024-06-21 18:49:05,601 | INFO     | sum of square deviations: 2830787960.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,602 | INFO     | sum of deviations: 1431025291.0000007
[2024-06-21 20:49:19] 2024-06-21 18:49:05,602 | INFO     | mean x: 1718988972.0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,602 | INFO     | mean y: 2369631.2775119618
[2024-06-21 20:49:19] 2024-06-21 18:49:05,602 | INFO     | -- intersect: -866616929.5817099
[2024-06-21 20:49:19] 2024-06-21 18:49:05,602 | INFO     | intersect: -866616929.5817099
[2024-06-21 20:49:19] 2024-06-21 18:49:05,602 | INFO     | chi2: 7.41522074080491e-05
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | -- intersect: -866616929.5817099
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | current memory leak: 0.51 B/s (using 209 data points, chi2=0.00)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | ..............................
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | . Timing measurements:
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | . get job = 0 s
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | . initial setup = 1 s
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | . payload setup = 7 s
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | . stage-in = 0 s
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | . payload execution = 16772 s
[2024-06-21 20:49:19] 2024-06-21 18:49:05,603 | INFO     | . stage-out = 0 s
[2024-06-21 20:49:19] 2024-06-21 18:49:05,604 | INFO     | . log creation = 0 s
[2024-06-21 20:49:19] 2024-06-21 18:49:05,604 | INFO     | ..............................
[2024-06-21 20:49:19] 2024-06-21 18:49:05,976 | INFO     | 
[2024-06-21 20:49:19] 2024-06-21 18:49:05,976 | INFO     | job summary report
[2024-06-21 20:49:19] 2024-06-21 18:49:05,976 | INFO     | --------------------------------------------------
[2024-06-21 20:49:19] 2024-06-21 18:49:05,976 | INFO     | PanDA job id: 6238842615
[2024-06-21 20:49:19] 2024-06-21 18:49:05,976 | INFO     | task id: 40024049
[2024-06-21 20:49:19] 2024-06-21 18:49:05,976 | INFO     | errors: (none)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | pilot state: finished 
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | transexitcode: 0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | exeerrorcode: 0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | exeerrordiag: 
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | exitcode: 0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | exitmsg: OK
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | cpuconsumptiontime: 63800 s
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | nevents: 400
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | neventsw: 0
[2024-06-21 20:49:19] 2024-06-21 18:49:05,977 | INFO     | pid: 3466530
[2024-06-21 20:49:19] 2024-06-21 18:49:05,978 | INFO     | pgrp: 3466530
[2024-06-21 20:49:19] 2024-06-21 18:49:05,978 | INFO     | corecount: 4
[2024-06-21 20:49:19] 2024-06-21 18:49:05,978 | INFO     | event service: False
[2024-06-21 20:49:19] 2024-06-21 18:49:05,978 | INFO     | sizes: {0: 2386804, 1: 2386804, 6: 2387038, 11: 2387066, 16783: 2418808, 16784: 2427790, 16787: 2427974, 16791: 2428144}
[2024-06-21 20:49:19] 2024-06-21 18:49:05,978 | INFO     | --------------------------------------------------
[2024-06-21 20:49:19] 2024-06-21 18:49:05,978 | INFO     | 
[2024-06-21 20:49:19] 2024-06-21 18:49:05,978 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | job 6238842615 has completed (purged errors)
[2024-06-21 20:49:19] 2024-06-21 18:49:05,999 | INFO     | overall cleanup function is called
[2024-06-21 20:49:19] 2024-06-21 18:49:07,006 | INFO     | --- collectZombieJob: --- 10, [3466530]
[2024-06-21 20:49:19] 2024-06-21 18:49:07,006 | INFO     | zombie collector waiting for pid 3466530
[2024-06-21 20:49:19] 2024-06-21 18:49:07,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 20:49:19] 2024-06-21 18:49:08,011 | INFO     | collected zombie processes
[2024-06-21 20:49:19] 2024-06-21 18:49:08,011 | INFO     | will now attempt to kill all subprocesses of pid=3466530
[2024-06-21 20:49:19] 2024-06-21 18:49:08,165 | INFO     | process IDs to be killed: [3466530] (in reverse order)
[2024-06-21 20:49:19] 2024-06-21 18:49:08,284 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 20:49:19] 2024-06-21 18:49:08,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 20:49:19] 2024-06-21 18:49:08,291 | INFO     | did not find any defunct processes belonging to 3466530
[2024-06-21 20:49:19] 2024-06-21 18:49:08,297 | INFO     | did not find any defunct processes belonging to 3466530
[2024-06-21 20:49:19] 2024-06-21 18:49:08,298 | INFO     | ready for new job
[2024-06-21 20:49:19] 2024-06-21 18:49:08,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 20:49:19] 2024-06-21 18:49:08,299 | INFO     | *************************************
[2024-06-21 20:49:19] 2024-06-21 18:49:08,300 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 20:49:19] 2024-06-21 18:49:08,300 | INFO     | *************************************
[2024-06-21 20:49:19] 2024-06-21 18:49:08,300 | INFO     | 
[2024-06-21 20:49:19] 2024-06-21 18:49:08,303 | INFO     | architecture information:
[2024-06-21 20:49:19] 2024-06-21 18:49:08,303 | INFO     | executing command: cat /etc/os-release
[2024-06-21 20:49:19] 2024-06-21 18:49:08,319 | INFO     | cat /etc/os-release:
[2024-06-21 20:49:19] NAME="CentOS Linux"
[2024-06-21 20:49:19] VERSION="7 (Core)"
[2024-06-21 20:49:19] ID="centos"
[2024-06-21 20:49:19] ID_LIKE="rhel fedora"
[2024-06-21 20:49:19] VERSION_ID="7"
[2024-06-21 20:49:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 20:49:19] ANSI_COLOR="0;31"
[2024-06-21 20:49:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 20:49:19] HOME_URL="https://www.centos.org/"
[2024-06-21 20:49:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 20:49:19] 
[2024-06-21 20:49:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 20:49:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 20:49:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 20:49:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 20:49:19] 
[2024-06-21 20:49:19] 2024-06-21 18:49:08,320 | INFO     | *************************************
[2024-06-21 20:49:19] 2024-06-21 18:49:08,822 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-06-21 20:49:20] 2024-06-21 18:49:08,839 | INFO     | sufficient remaining disk space (660125777920 B)
[2024-06-21 20:49:20] 2024-06-21 18:49:08,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 20:49:20] 2024-06-21 18:49:08,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 20:49:20] 2024-06-21 18:49:08,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 20:49:20] 2024-06-21 18:49:08,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 20:49:20] 2024-06-21 18:49:08,840 | INFO     | aborting loop
[2024-06-21 20:49:20] 2024-06-21 18:49:08,849 | INFO     | all payload control threads have been joined
[2024-06-21 20:49:20] 2024-06-21 18:49:09,110 | INFO     | all data control threads have been joined
[2024-06-21 20:49:20] 2024-06-21 18:49:09,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 20:49:20] 2024-06-21 18:49:09,612 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 20:49:20] 2024-06-21 18:49:09,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 20:49:20] 2024-06-21 18:49:09,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 20:49:20] 2024-06-21 18:49:09,845 | INFO     | [job] retrieve thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:09,846 | INFO     | [job] job monitor thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:09,854 | INFO     | [payload] control thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:09,861 | INFO     | all job control threads have been joined
[2024-06-21 20:49:20] 2024-06-21 18:49:09,946 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,022 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,086 | INFO     | [payload] validate_post thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,114 | INFO     | [data] control thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,156 | INFO     | [data] copytool_in thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,321 | INFO     | [job] validate thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,629 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 20:49:20] 2024-06-21 18:49:10,759 | INFO     | [payload] failed_post thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,807 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:10,862 | INFO     | [job] control thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:11,302 | INFO     | [data] copytool_out thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:11,676 | INFO     | [job] queue monitor thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:12,846 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 20:49:20] 2024-06-21 18:49:13,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47297059968064)>', '<ExcThread(monitor, started 47297242343168)>']
[2024-06-21 20:49:20] 2024-06-21 18:49:14,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 20:49:20] 2024-06-21 18:49:14,637 | INFO     | [monitor] control thread has ended
[2024-06-21 20:49:20] 2024-06-21 18:49:18,922 | INFO     | all workflow threads have been joined
[2024-06-21 20:49:20] 2024-06-21 18:49:18,922 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 20:49:20] 2024-06-21 18:49:18,922 | INFO     | traces error code: 0
[2024-06-21 20:49:20] 2024-06-21 18:49:18,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 20:49:20] 2024-06-21 18:49:19,021 [wrapper] ==== pilot stdout END ====
[2024-06-21 20:49:20] 2024-06-21 18:49:19,024 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 20:49:20] 2024-06-21 18:49:19,026 [wrapper] pilotpid: 3456311
[2024-06-21 20:49:20] 2024-06-21 18:49:19,028 [wrapper] Pilot exit status: 0
[2024-06-21 20:49:20] 2024-06-21 18:49:19,038 [wrapper] pandaids: 6238842615
[2024-06-21 20:49:20] 2024-06-21 18:49:19,100 [wrapper] cleanup supervisor_pilot 4038198 3456312
[2024-06-21 20:49:20] 2024-06-21 18:49:19,103 [wrapper] Test setup, not cleaning
[2024-06-21 20:49:20] 2024-06-21 18:49:19,105 [wrapper] ==== wrapper stdout END ====
[2024-06-21 20:49:20] 2024-06-21 18:49:19,108 [wrapper] ==== wrapper stderr END ====
[2024-06-21 20:49:20] 2024-06-21 18:49:19,112 [wrapper] apfmon messages muted
[2024-06-21 20:49:20]  *** Error codes and diagnostics ***
[2024-06-21 20:49:20]     "exeErrorCode": 0,
[2024-06-21 20:49:20]     "exeErrorDiag": "",
[2024-06-21 20:49:20]     "pilotErrorCode": 0,
[2024-06-21 20:49:20]     "pilotErrorDiag": "",
[2024-06-21 20:49:20]  *** Listing of results directory ***
[2024-06-21 20:49:20] total 874844
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc    469766 Jun 20 12:57 pilot3.tar.gz
[2024-06-21 20:49:20] -rwx------ 1 boinc boinc     32308 Jun 20 13:06 runpilot2-wrapper.sh
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:06 queuedata.json
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc       100 Jun 21 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 20:49:20] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 16:08 run_atlas
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc       105 Jun 21 16:08 job.xml
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc      6661 Jun 21 16:08 init_data.xml
[2024-06-21 20:49:20] -rw-r--r-- 2 boinc boinc 615441375 Jun 21 16:08 EVNT.40024047._000012.pool.root.1
[2024-06-21 20:49:20] -rw-r--r-- 2 boinc boinc     17537 Jun 21 16:08 start_atlas.sh
[2024-06-21 20:49:20] drwxrwx--x 2 boinc boinc      4096 Jun 21 16:08 shared
[2024-06-21 20:49:20] -rw-r--r-- 2 boinc boinc    482477 Jun 21 16:08 input.tar.gz
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc         0 Jun 21 16:08 boinc_lockfile
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc      2491 Jun 21 16:08 pandaJob.out
[2024-06-21 20:49:20] -rw------- 1 boinc boinc       424 Jun 21 16:08 setup.sh.local
[2024-06-21 20:49:20] -rw------- 1 boinc boinc   1023013 Jun 21 16:08 agis_schedconf.cvmfs.json
[2024-06-21 20:49:20] -rw------- 1 boinc boinc   1321251 Jun 21 16:08 cric_ddmendpoints.json
[2024-06-21 20:49:20] drwx------ 4 boinc boinc      4096 Jun 21 16:08 pilot3
[2024-06-21 20:49:20] -rw------- 1 boinc boinc 272480616 Jun 21 20:48 HITS.40024049._000049.pool.root.1
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc       532 Jun 21 20:48 boinc_task_state.xml
[2024-06-21 20:49:20] -rw------- 1 boinc boinc        95 Jun 21 20:48 pilot_heartbeat.json
[2024-06-21 20:49:20] -rw------- 1 boinc boinc      1046 Jun 21 20:48 memory_monitor_summary.json
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc      8192 Jun 21 20:48 boinc_mmap_file
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc        28 Jun 21 20:48 wrapper_checkpoint.txt
[2024-06-21 20:49:20] -rw------- 1 boinc boinc         0 Jun 21 20:48 agis_ddmendpoints.agis.ALL.json
[2024-06-21 20:49:20] -rw------- 1 boinc boinc    385942 Jun 21 20:48 log.40024049._000049.job.log.tgz.1
[2024-06-21 20:49:20] -rw------- 1 boinc boinc      7753 Jun 21 20:49 heartbeat.json
[2024-06-21 20:49:20] -rw------- 1 boinc boinc      4221 Jun 21 20:49 pilotlog.txt
[2024-06-21 20:49:20] -rw------- 1 boinc boinc   1803601 Jun 21 20:49 log.40024049._000049.job.log.1
[2024-06-21 20:49:20] -rw------- 1 boinc boinc       357 Jun 21 20:49 output.list
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc       620 Jun 21 20:49 runtime_log
[2024-06-21 20:49:20] -rw------- 1 boinc boinc   2211840 Jun 21 20:49 result.tar.gz
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc     11410 Jun 21 20:49 runtime_log.err
[2024-06-21 20:49:20] -rw------- 1 boinc boinc       659 Jun 21 20:49 jc5LDmtnUe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm66kKDm4473qn.diag
[2024-06-21 20:49:20] -rw-r--r-- 1 boinc boinc     21343 Jun 21 20:49 stderr.txt
[2024-06-21 20:49:20] HITS file was successfully produced:
[2024-06-21 20:49:20] -rw------- 1 boinc boinc 272480616 Jun 21 20:48 shared/HITS.pool.root.1
[2024-06-21 20:49:20]  *** Contents of shared directory: ***
[2024-06-21 20:49:20] total 869776
[2024-06-21 20:49:20] -rw-r--r-- 2 boinc boinc 615441375 Jun 21 16:08 ATLAS.root_0
[2024-06-21 20:49:20] -rw-r--r-- 2 boinc boinc     17537 Jun 21 16:08 start_atlas.sh
[2024-06-21 20:49:20] -rw-r--r-- 2 boinc boinc    482477 Jun 21 16:08 input.tar.gz
[2024-06-21 20:49:20] -rw------- 1 boinc boinc 272480616 Jun 21 20:48 HITS.pool.root.1
[2024-06-21 20:49:20] -rw------- 1 boinc boinc   2211840 Jun 21 20:49 result.tar.gz
20:49:21 (3451952): run_atlas exited; CPU time 63484.385953
20:49:21 (3451952): called boinc_finish(0)

</stderr_txt>
]]>

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