Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:57:15 (1649961): wrapper (7.7.26015): starting
02:57:15 (1649961): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 02:57:15] Arguments: --nthreads 4
[2024-06-21 02:57:15] Threads: 4
[2024-06-21 02:57:15] Checking for CVMFS
[2024-06-21 02:57:15] No cvmfs_config command found, will try listing directly
[2024-06-21 02:57:15] CVMFS is ok
[2024-06-21 02:57:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 02:57:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 02:57:15] Further information can be found at the LHC@home message board.
[2024-06-21 02:57:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 02:57:15] Checking for apptainer binary...
[2024-06-21 02:57:15] which: no apptainer in ((null))
[2024-06-21 02:57:15] apptainer is not installed, using version from CVMFS
[2024-06-21 02:57:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 02:57:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-06-21 02:57:16] apptainer works
[2024-06-21 02:57:16] Set ATHENA_PROC_NUMBER=4
[2024-06-21 02:57:16] Set ATHENA_CORE_NUMBER=4
[2024-06-21 02:57:16] Starting ATLAS job with PandaID=6238833697
[2024-06-21 02:57:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 07:40:40]  *** The last 200 lines of the pilot log: ***
[2024-06-21 07:40:40] 2024-06-21 05:40:26,512 | INFO     | chi2: 0.05067659407395745
[2024-06-21 07:40:40] 2024-06-21 05:40:26,512 | INFO     | current chi2=0.05067659407395745 (change=96.68144648304893 %)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,512 | INFO     | model: linear, x: [1718932395.0, 1718932456.0, 1718932517.0, 1718932578.0, 1718932639.0, 1718932700.0, 1718932761.0, 1718932822.0, 1718932883.0, 1718932944.0, 1718
[2024-06-21 07:40:40] 2024-06-21 05:40:26,512 | INFO     | sum of square deviations: 5640782972.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,514 | INFO     | sum of deviations: 17441247490.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,514 | INFO     | mean x: 1718940386.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,514 | INFO     | mean y: 2366679.2699619774
[2024-06-21 07:40:40] 2024-06-21 05:40:26,514 | INFO     | -- intersect: -5312580703.3187065
[2024-06-21 07:40:40] 2024-06-21 05:40:26,514 | INFO     | intersect: -5312580703.3187065
[2024-06-21 07:40:40] 2024-06-21 05:40:26,515 | INFO     | chi2: 0.003071010570061468
[2024-06-21 07:40:40] 2024-06-21 05:40:26,515 | INFO     | current chi2=0.003071010570061468 (change=93.9399823011396 %)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,515 | INFO     | model: linear, x: [1718932700.0, 1718932761.0, 1718932822.0, 1718932883.0, 1718932944.0, 1718933005.0, 1718933066.0, 1718933127.0, 1718933188.0, 1718933249.0, 1718
[2024-06-21 07:40:40] 2024-06-21 05:40:26,515 | INFO     | sum of square deviations: 5325139844.5
[2024-06-21 07:40:40] 2024-06-21 05:40:26,517 | INFO     | sum of deviations: 16662989451.5
[2024-06-21 07:40:40] 2024-06-21 05:40:26,518 | INFO     | mean x: 1718940538.5
[2024-06-21 07:40:40] 2024-06-21 05:40:26,518 | INFO     | mean y: 2367060.3449612404
[2024-06-21 07:40:40] 2024-06-21 05:40:26,518 | INFO     | -- intersect: -5376400239.140038
[2024-06-21 07:40:40] 2024-06-21 05:40:26,518 | INFO     | intersect: -5376400239.140038
[2024-06-21 07:40:40] 2024-06-21 05:40:26,518 | INFO     | chi2: 0.00217696106506015
[2024-06-21 07:40:40] 2024-06-21 05:40:26,518 | INFO     | current chi2=0.00217696106506015 (change=29.112550562905525 %)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,519 | INFO     | model: linear, x: [1718933005.0, 1718933066.0, 1718933127.0, 1718933188.0, 1718933249.0, 1718933310.0, 1718933371.0, 1718933432.0, 1718933493.0, 1718933554.0, 1718
[2024-06-21 07:40:40] 2024-06-21 05:40:26,519 | INFO     | sum of square deviations: 5021496942.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | sum of deviations: 14646145689.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | mean x: 1718940691.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | mean y: 2368073.328063241
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | -- intersect: -5011247603.8148365
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | intersect: -5011247603.8148365
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | chi2: 0.0014567252611758501
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | current chi2=0.0014567252611758501 (change=33.08445959112271 %)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | model: linear, x: [1718933310.0, 1718933371.0, 1718933432.0, 1718933493.0, 1718933554.0, 1718933615.0, 1718933676.0, 1718933737.0, 1718933798.0, 1718933859.0, 1718
[2024-06-21 07:40:40] 2024-06-21 05:40:26,520 | INFO     | sum of square deviations: 4729621702.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,521 | INFO     | sum of deviations: 13043752213.500002
[2024-06-21 07:40:40] 2024-06-21 05:40:26,521 | INFO     | mean x: 1718940843.5
[2024-06-21 07:40:40] 2024-06-21 05:40:26,521 | INFO     | mean y: 2368910.6411290322
[2024-06-21 07:40:40] 2024-06-21 05:40:26,522 | INFO     | -- intersect: -4738272063.413392
[2024-06-21 07:40:40] 2024-06-21 05:40:26,522 | INFO     | intersect: -4738272063.413392
[2024-06-21 07:40:40] 2024-06-21 05:40:26,522 | INFO     | chi2: 0.0010860186785977928
[2024-06-21 07:40:40] 2024-06-21 05:40:26,522 | INFO     | current chi2=0.0010860186785977928 (change=25.447940834006523 %)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,522 | INFO     | model: linear, x: [1718933615.0, 1718933676.0, 1718933737.0, 1718933798.0, 1718933859.0, 1718933920.0, 1718933981.0, 1718934042.0, 1718934103.0, 1718934164.0, 1718
[2024-06-21 07:40:40] 2024-06-21 05:40:26,522 | INFO     | sum of square deviations: 4449281562.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,523 | INFO     | sum of deviations: 11862516341.000023
[2024-06-21 07:40:40] 2024-06-21 05:40:26,523 | INFO     | mean x: 1718940996.0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,523 | INFO     | mean y: 2369552.6790123456
[2024-06-21 07:40:40] 2024-06-21 05:40:26,523 | INFO     | -- intersect: -4580609827.277084
[2024-06-21 07:40:40] 2024-06-21 05:40:26,523 | INFO     | intersect: -4580609827.277084
[2024-06-21 07:40:40] 2024-06-21 05:40:26,523 | INFO     | chi2: 0.0009639583969738264
[2024-06-21 07:40:40] 2024-06-21 05:40:26,523 | INFO     | current chi2=0.0009639583969738264 (change=11.239243304872419 %)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,523 | INFO     | left removable region: 70
[2024-06-21 07:40:40] 2024-06-21 05:40:26,524 | INFO     | model: linear, x: [1718935750.0, 1718935811.0, 1718935872.0, 1718935933.0, 1718935994.0, 1718936055.0, 1718936116.0, 1718936177.0, 1718936238.0, 1718936299.0, 1718
[2024-06-21 07:40:40] 2024-06-21 05:40:26,524 | INFO     | sum of square deviations: 2555770710.5
[2024-06-21 07:40:40] 2024-06-21 05:40:26,524 | INFO     | sum of deviations: 6485297471.999999
[2024-06-21 07:40:40] 2024-06-21 05:40:26,524 | INFO     | mean x: 1718941880.5
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | mean y: 2372591.9306930695
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | -- intersect: -4359462132.257322
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | intersect: -4359462132.257322
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | chi2: 0.0008228962093182914
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | -- intersect: -4359462132.257322
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | current memory leak: 2.54 B/s (using 202 data points, chi2=0.00)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | ..............................
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | . Timing measurements:
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | . get job = 0 s
[2024-06-21 07:40:40] 2024-06-21 05:40:26,525 | INFO     | . initial setup = 1 s
[2024-06-21 07:40:40] 2024-06-21 05:40:26,526 | INFO     | . payload setup = 7 s
[2024-06-21 07:40:40] 2024-06-21 05:40:26,526 | INFO     | . stage-in = 0 s
[2024-06-21 07:40:40] 2024-06-21 05:40:26,526 | INFO     | . payload execution = 16940 s
[2024-06-21 07:40:40] 2024-06-21 05:40:26,526 | INFO     | . stage-out = 1 s
[2024-06-21 07:40:40] 2024-06-21 05:40:26,526 | INFO     | . log creation = 0 s
[2024-06-21 07:40:40] 2024-06-21 05:40:26,526 | INFO     | ..............................
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | 
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | job summary report
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | --------------------------------------------------
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | PanDA job id: 6238833697
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | task id: 40024023
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | errors: (none)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | pilot state: finished 
[2024-06-21 07:40:40] 2024-06-21 05:40:26,589 | INFO     | transexitcode: 0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | exeerrorcode: 0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | exeerrordiag: 
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | exitcode: 0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | exitmsg: OK
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | cpuconsumptiontime: 64671 s
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | nevents: 400
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | neventsw: 0
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | pid: 1672423
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | pgrp: 1672423
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | corecount: 4
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | event service: False
[2024-06-21 07:40:40] 2024-06-21 05:40:26,590 | INFO     | sizes: {0: 2385942, 1: 2386877, 6: 2387083, 12: 2387111, 16950: 2418945, 16953: 2428111, 16960: 2428225}
[2024-06-21 07:40:40] 2024-06-21 05:40:26,591 | INFO     | --------------------------------------------------
[2024-06-21 07:40:40] 2024-06-21 05:40:26,591 | INFO     | 
[2024-06-21 07:40:40] 2024-06-21 05:40:26,591 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-06-21 07:40:40] 2024-06-21 05:40:26,613 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,613 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,613 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,613 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,614 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,615 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 07:40:40] 2024-06-21 05:40:26,615 | INFO     | job 6238833697 has completed (purged errors)
[2024-06-21 07:40:40] 2024-06-21 05:40:26,615 | INFO     | overall cleanup function is called
[2024-06-21 07:40:40] 2024-06-21 05:40:27,622 | INFO     | --- collectZombieJob: --- 10, [1672423]
[2024-06-21 07:40:40] 2024-06-21 05:40:27,623 | INFO     | zombie collector waiting for pid 1672423
[2024-06-21 07:40:40] 2024-06-21 05:40:27,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 07:40:40] 2024-06-21 05:40:27,699 | INFO     | 16979s have passed since pilot start
[2024-06-21 07:40:40] 2024-06-21 05:40:28,627 | INFO     | collected zombie processes
[2024-06-21 07:40:40] 2024-06-21 05:40:28,628 | INFO     | will now attempt to kill all subprocesses of pid=1672423
[2024-06-21 07:40:40] 2024-06-21 05:40:28,835 | INFO     | process IDs to be killed: [1672423] (in reverse order)
[2024-06-21 07:40:40] 2024-06-21 05:40:28,939 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 07:40:40] 2024-06-21 05:40:28,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 07:40:40] 2024-06-21 05:40:28,945 | INFO     | did not find any defunct processes belonging to 1672423
[2024-06-21 07:40:40] 2024-06-21 05:40:28,951 | INFO     | did not find any defunct processes belonging to 1672423
[2024-06-21 07:40:40] 2024-06-21 05:40:28,951 | INFO     | ready for new job
[2024-06-21 07:40:40] 2024-06-21 05:40:28,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 07:40:40] 2024-06-21 05:40:28,953 | INFO     | *************************************
[2024-06-21 07:40:40] 2024-06-21 05:40:28,953 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 07:40:40] 2024-06-21 05:40:28,953 | INFO     | *************************************
[2024-06-21 07:40:40] 2024-06-21 05:40:28,953 | INFO     | 
[2024-06-21 07:40:40] 2024-06-21 05:40:28,956 | INFO     | architecture information:
[2024-06-21 07:40:40] 2024-06-21 05:40:28,956 | INFO     | executing command: cat /etc/os-release
[2024-06-21 07:40:40] 2024-06-21 05:40:28,971 | INFO     | cat /etc/os-release:
[2024-06-21 07:40:40] NAME="CentOS Linux"
[2024-06-21 07:40:40] VERSION="7 (Core)"
[2024-06-21 07:40:40] ID="centos"
[2024-06-21 07:40:40] ID_LIKE="rhel fedora"
[2024-06-21 07:40:40] VERSION_ID="7"
[2024-06-21 07:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 07:40:40] ANSI_COLOR="0;31"
[2024-06-21 07:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 07:40:40] HOME_URL="https://www.centos.org/"
[2024-06-21 07:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 07:40:40] 
[2024-06-21 07:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 07:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 07:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 07:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 07:40:40] 
[2024-06-21 07:40:40] 2024-06-21 05:40:28,971 | INFO     | *************************************
[2024-06-21 07:40:40] 2024-06-21 05:40:29,474 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-06-21 07:40:40] 2024-06-21 05:40:29,496 | INFO     | sufficient remaining disk space (660179255296 B)
[2024-06-21 07:40:40] 2024-06-21 05:40:29,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 07:40:40] 2024-06-21 05:40:29,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 07:40:40] 2024-06-21 05:40:29,497 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 07:40:40] 2024-06-21 05:40:29,498 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 07:40:40] 2024-06-21 05:40:29,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 07:40:40] 2024-06-21 05:40:29,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 07:40:40] 2024-06-21 05:40:29,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 07:40:40] 2024-06-21 05:40:29,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 07:40:40] 2024-06-21 05:40:29,839 | INFO     | all job control threads have been joined
[2024-06-21 07:40:40] 2024-06-21 05:40:29,840 | INFO     | all payload control threads have been joined
[2024-06-21 07:40:40] 2024-06-21 05:40:29,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 07:40:40] 2024-06-21 05:40:29,934 | INFO     | aborting loop
[2024-06-21 07:40:40] 2024-06-21 05:40:30,402 | INFO     | all data control threads have been joined
[2024-06-21 07:40:40] 2024-06-21 05:40:30,502 | INFO     | [job] retrieve thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:30,571 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:30,741 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:30,845 | INFO     | [job] control thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:30,845 | INFO     | [payload] control thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:30,939 | INFO     | [job] job monitor thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:31,001 | INFO     | [data] copytool_in thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:31,066 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:31,341 | INFO     | [payload] failed_post thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:31,408 | INFO     | [data] control thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:31,586 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:31,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 07:40:40] 2024-06-21 05:40:31,674 | INFO     | [data] copytool_out thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:31,842 | INFO     | [job] validate thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:32,069 | INFO     | [payload] validate_post thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:32,607 | INFO     | [job] queue monitor thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:33,742 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 07:40:40] 2024-06-21 05:40:34,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47463486452800)>', '<ExcThread(monitor, started 47463673030400)>']
[2024-06-21 07:40:40] 2024-06-21 05:40:34,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 07:40:40] 2024-06-21 05:40:34,524 | INFO     | [monitor] control thread has ended
[2024-06-21 07:40:40] 2024-06-21 05:40:39,243 | INFO     | all workflow threads have been joined
[2024-06-21 07:40:40] 2024-06-21 05:40:39,244 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 07:40:40] 2024-06-21 05:40:39,244 | INFO     | traces error code: 0
[2024-06-21 07:40:40] 2024-06-21 05:40:39,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 07:40:40] 2024-06-21 05:40:39,375 [wrapper] ==== pilot stdout END ====
[2024-06-21 07:40:40] 2024-06-21 05:40:39,377 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 07:40:40] 2024-06-21 05:40:39,383 [wrapper] pilotpid: 1657694
[2024-06-21 07:40:40] 2024-06-21 05:40:39,387 [wrapper] Pilot exit status: 0
[2024-06-21 07:40:40] 2024-06-21 05:40:39,400 [wrapper] pandaids: 6238833697
[2024-06-21 07:40:40] 2024-06-21 05:40:39,473 [wrapper] cleanup supervisor_pilot 2315984 1657695
[2024-06-21 07:40:40] 2024-06-21 05:40:39,475 [wrapper] Test setup, not cleaning
[2024-06-21 07:40:40] 2024-06-21 05:40:39,477 [wrapper] ==== wrapper stdout END ====
[2024-06-21 07:40:40] 2024-06-21 05:40:39,479 [wrapper] ==== wrapper stderr END ====
[2024-06-21 07:40:40] 2024-06-21 05:40:39,484 [wrapper] apfmon messages muted
[2024-06-21 07:40:40]  *** Error codes and diagnostics ***
[2024-06-21 07:40:40]     "exeErrorCode": 0,
[2024-06-21 07:40:40]     "exeErrorDiag": "",
[2024-06-21 07:40:40]     "pilotErrorCode": 0,
[2024-06-21 07:40:40]     "pilotErrorDiag": "",
[2024-06-21 07:40:40]  *** Listing of results directory ***
[2024-06-21 07:40:40] total 837724
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc    469766 Jun 20 12:33 pilot3.tar.gz
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc      5654 Jun 20 12:54 queuedata.json
[2024-06-21 07:40:40] -rwx------ 1 boinc boinc     32308 Jun 20 12:55 runpilot2-wrapper.sh
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc       100 Jun 21 02:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 07:40:40] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 02:57 run_atlas
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc       105 Jun 21 02:57 job.xml
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc      6661 Jun 21 02:57 init_data.xml
[2024-06-21 07:40:40] -rw-r--r-- 2 boinc boinc 593716609 Jun 21 02:57 EVNT.40024021._000048.pool.root.1
[2024-06-21 07:40:40] -rw-r--r-- 2 boinc boinc     17537 Jun 21 02:57 start_atlas.sh
[2024-06-21 07:40:40] drwxrwx--x 2 boinc boinc      4096 Jun 21 02:57 shared
[2024-06-21 07:40:40] -rw-r--r-- 2 boinc boinc    482484 Jun 21 02:57 input.tar.gz
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc         0 Jun 21 02:57 boinc_lockfile
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc      2523 Jun 21 02:57 pandaJob.out
[2024-06-21 07:40:40] -rw------- 1 boinc boinc       424 Jun 21 02:57 setup.sh.local
[2024-06-21 07:40:40] -rw------- 1 boinc boinc   1024134 Jun 21 02:57 agis_schedconf.cvmfs.json
[2024-06-21 07:40:40] -rw------- 1 boinc boinc   1321251 Jun 21 02:57 cric_ddmendpoints.json
[2024-06-21 07:40:40] drwx------ 4 boinc boinc      4096 Jun 21 02:57 pilot3
[2024-06-21 07:40:40] -rw------- 1 boinc boinc 256105966 Jun 21 07:39 HITS.40024023._000619.pool.root.1
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc       531 Jun 21 07:39 boinc_task_state.xml
[2024-06-21 07:40:40] -rw------- 1 boinc boinc      1044 Jun 21 07:40 memory_monitor_summary.json
[2024-06-21 07:40:40] -rw------- 1 boinc boinc         0 Jun 21 07:40 agis_ddmendpoints.agis.ALL.json
[2024-06-21 07:40:40] -rw------- 1 boinc boinc    378995 Jun 21 07:40 log.40024023._000619.job.log.tgz.1
[2024-06-21 07:40:40] -rw------- 1 boinc boinc        95 Jun 21 07:40 pilot_heartbeat.json
[2024-06-21 07:40:40] -rw------- 1 boinc boinc      7756 Jun 21 07:40 heartbeat.json
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc      8192 Jun 21 07:40 boinc_mmap_file
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc        28 Jun 21 07:40 wrapper_checkpoint.txt
[2024-06-21 07:40:40] -rw------- 1 boinc boinc      4344 Jun 21 07:40 pilotlog.txt
[2024-06-21 07:40:40] -rw------- 1 boinc boinc   1855788 Jun 21 07:40 log.40024023._000619.job.log.1
[2024-06-21 07:40:40] -rw------- 1 boinc boinc       357 Jun 21 07:40 output.list
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc       620 Jun 21 07:40 runtime_log
[2024-06-21 07:40:40] -rw------- 1 boinc boinc   2252800 Jun 21 07:40 result.tar.gz
[2024-06-21 07:40:40] -rw------- 1 boinc boinc       658 Jun 21 07:40 zllMDmpcUe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDml6kKDmaXcfwm.diag
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc     11410 Jun 21 07:40 runtime_log.err
[2024-06-21 07:40:40] -rw-r--r-- 1 boinc boinc     21395 Jun 21 07:40 stderr.txt
[2024-06-21 07:40:40] HITS file was successfully produced:
[2024-06-21 07:40:40] -rw------- 1 boinc boinc 256105966 Jun 21 07:39 shared/HITS.pool.root.1
[2024-06-21 07:40:40]  *** Contents of shared directory: ***
[2024-06-21 07:40:40] total 832608
[2024-06-21 07:40:40] -rw-r--r-- 2 boinc boinc 593716609 Jun 21 02:57 ATLAS.root_0
[2024-06-21 07:40:40] -rw-r--r-- 2 boinc boinc     17537 Jun 21 02:57 start_atlas.sh
[2024-06-21 07:40:40] -rw-r--r-- 2 boinc boinc    482484 Jun 21 02:57 input.tar.gz
[2024-06-21 07:40:40] -rw------- 1 boinc boinc 256105966 Jun 21 07:39 HITS.pool.root.1
[2024-06-21 07:40:40] -rw------- 1 boinc boinc   2252800 Jun 21 07:40 result.tar.gz
07:40:41 (1649961): run_atlas exited; CPU time 64400.454012
07:40:41 (1649961): called boinc_finish(0)

</stderr_txt>
]]>

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