Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:49:21 (3111526): wrapper (7.7.26015): starting
12:49:21 (3111526): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 12:49:21] Arguments: --nthreads 4
[2024-06-21 12:49:21] Threads: 4
[2024-06-21 12:49:21] Checking for CVMFS
[2024-06-21 12:49:21] No cvmfs_config command found, will try listing directly
[2024-06-21 12:49:21] CVMFS is ok
[2024-06-21 12:49:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 12:49:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 12:49:21] Further information can be found at the LHC@home message board.
[2024-06-21 12:49:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 12:49:21] Checking for apptainer binary...
[2024-06-21 12:49:21] which: no apptainer in ((null))
[2024-06-21 12:49:21] apptainer is not installed, using version from CVMFS
[2024-06-21 12:49:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 12:49:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-06-21 12:49:22] apptainer works
[2024-06-21 12:49:22] Set ATHENA_PROC_NUMBER=4
[2024-06-21 12:49:22] Set ATHENA_CORE_NUMBER=4
[2024-06-21 12:49:22] Starting ATLAS job with PandaID=6238833639
[2024-06-21 12:49:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 17:25:01]  *** The last 200 lines of the pilot log: ***
[2024-06-21 17:25:01] 2024-06-21 15:24:39,086 | INFO     | current chi2=1.1418679114411028 (change=65.43809968209902 %)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,086 | INFO     | model: linear, x: [1718967617.0, 1718967678.0, 1718967739.0, 1718967800.0, 1718967861.0, 1718967922.0, 1718967983.0, 1718968044.0, 1718968105.0, 1718968166.0, 1718
[2024-06-21 17:25:01] 2024-06-21 15:24:39,086 | INFO     | sum of square deviations: 5449944045.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,088 | INFO     | sum of deviations: 15299953876.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,088 | INFO     | mean x: 1718975516.5
[2024-06-21 17:25:01] 2024-06-21 15:24:39,088 | INFO     | mean y: 2361725.7
[2024-06-21 17:25:01] 2024-06-21 15:24:39,088 | INFO     | -- intersect: -4823421052.850211
[2024-06-21 17:25:01] 2024-06-21 15:24:39,088 | INFO     | intersect: -4823421052.850211
[2024-06-21 17:25:01] 2024-06-21 15:24:39,089 | INFO     | chi2: 0.049691441471285056
[2024-06-21 17:25:01] 2024-06-21 15:24:39,089 | INFO     | current chi2=0.049691441471285056 (change=95.64823207891257 %)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,089 | INFO     | model: linear, x: [1718967922.0, 1718967983.0, 1718968044.0, 1718968105.0, 1718968166.0, 1718968227.0, 1718968288.0, 1718968349.0, 1718968410.0, 1718968471.0, 1718
[2024-06-21 17:25:01] 2024-06-21 15:24:39,089 | INFO     | sum of square deviations: 5141528960.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,091 | INFO     | sum of deviations: 14959305110.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,091 | INFO     | mean x: 1718975669.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,091 | INFO     | mean y: 2361855.5843137256
[2024-06-21 17:25:01] 2024-06-21 15:24:39,091 | INFO     | -- intersect: -4999006746.886296
[2024-06-21 17:25:01] 2024-06-21 15:24:39,091 | INFO     | intersect: -4999006746.886296
[2024-06-21 17:25:01] 2024-06-21 15:24:39,092 | INFO     | chi2: 0.01049915264989321
[2024-06-21 17:25:01] 2024-06-21 15:24:39,092 | INFO     | current chi2=0.01049915264989321 (change=78.87130592506499 %)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,092 | INFO     | model: linear, x: [1718968227.0, 1718968288.0, 1718968349.0, 1718968410.0, 1718968471.0, 1718968532.0, 1718968593.0, 1718968654.0, 1718968715.0, 1718968776.0, 1718
[2024-06-21 17:25:01] 2024-06-21 15:24:39,092 | INFO     | sum of square deviations: 4844974562.5
[2024-06-21 17:25:01] 2024-06-21 15:24:39,094 | INFO     | sum of deviations: 14370920307.5
[2024-06-21 17:25:01] 2024-06-21 15:24:39,094 | INFO     | mean x: 1718975821.5
[2024-06-21 17:25:01] 2024-06-21 15:24:39,094 | INFO     | mean y: 2362173.012
[2024-06-21 17:25:01] 2024-06-21 15:24:39,094 | INFO     | -- intersect: -5096377608.306685
[2024-06-21 17:25:01] 2024-06-21 15:24:39,094 | INFO     | intersect: -5096377608.306685
[2024-06-21 17:25:01] 2024-06-21 15:24:39,095 | INFO     | chi2: 0.0015954930435021256
[2024-06-21 17:25:01] 2024-06-21 15:24:39,095 | INFO     | current chi2=0.0015954930435021256 (change=84.80360180763394 %)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,095 | INFO     | model: linear, x: [1718968532.0, 1718968593.0, 1718968654.0, 1718968715.0, 1718968776.0, 1718968837.0, 1718968898.0, 1718968959.0, 1718969020.0, 1718969081.0, 1718
[2024-06-21 17:25:01] 2024-06-21 15:24:39,095 | INFO     | sum of square deviations: 4560048290.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,097 | INFO     | sum of deviations: 12498663564.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,097 | INFO     | mean x: 1718975974.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,097 | INFO     | mean y: 2363174.0408163266
[2024-06-21 17:25:01] 2024-06-21 15:24:39,097 | INFO     | -- intersect: -4709188328.76689
[2024-06-21 17:25:01] 2024-06-21 15:24:39,097 | INFO     | intersect: -4709188328.76689
[2024-06-21 17:25:01] 2024-06-21 15:24:39,098 | INFO     | chi2: 0.0008557124820385791
[2024-06-21 17:25:01] 2024-06-21 15:24:39,098 | INFO     | current chi2=0.0008557124820385791 (change=46.366893574146815 %)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,098 | INFO     | model: linear, x: [1718968837.0, 1718968898.0, 1718968959.0, 1718969020.0, 1718969081.0, 1718969142.0, 1718969203.0, 1718969264.0, 1718969325.0, 1718969386.0, 1718
[2024-06-21 17:25:01] 2024-06-21 15:24:39,098 | INFO     | sum of square deviations: 4286517580.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,100 | INFO     | sum of deviations: 11231893308.500002
[2024-06-21 17:25:01] 2024-06-21 15:24:39,100 | INFO     | mean x: 1718976126.5
[2024-06-21 17:25:01] 2024-06-21 15:24:39,100 | INFO     | mean y: 2363880.0708333333
[2024-06-21 17:25:01] 2024-06-21 15:24:39,100 | INFO     | -- intersect: -4501841711.61756
[2024-06-21 17:25:01] 2024-06-21 15:24:39,100 | INFO     | intersect: -4501841711.61756
[2024-06-21 17:25:01] 2024-06-21 15:24:39,101 | INFO     | chi2: 0.0006648760814369714
[2024-06-21 17:25:01] 2024-06-21 15:24:39,101 | INFO     | current chi2=0.0006648760814369714 (change=22.301462770178915 %)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,101 | INFO     | left removable region: 60
[2024-06-21 17:25:01] 2024-06-21 15:24:39,101 | INFO     | model: linear, x: [1718970667.0, 1718970728.0, 1718970789.0, 1718970850.0, 1718970911.0, 1718970972.0, 1718971033.0, 1718971094.0, 1718971155.0, 1718971216.0, 1718
[2024-06-21 17:25:01] 2024-06-21 15:24:39,101 | INFO     | sum of square deviations: 2632440055.0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,103 | INFO     | sum of deviations: 6070783287.5
[2024-06-21 17:25:01] 2024-06-21 15:24:39,103 | INFO     | mean x: 1718976858.5
[2024-06-21 17:25:01] 2024-06-21 15:24:39,103 | INFO     | mean y: 2366245.132352941
[2024-06-21 17:25:01] 2024-06-21 15:24:39,103 | INFO     | -- intersect: -3961840257.636825
[2024-06-21 17:25:01] 2024-06-21 15:24:39,103 | INFO     | intersect: -3961840257.636825
[2024-06-21 17:25:01] 2024-06-21 15:24:39,103 | INFO     | chi2: 0.00031096457552605753
[2024-06-21 17:25:01] 2024-06-21 15:24:39,104 | INFO     | -- intersect: -3961840257.636825
[2024-06-21 17:25:01] 2024-06-21 15:24:39,104 | INFO     | current memory leak: 2.31 B/s (using 204 data points, chi2=0.00)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,104 | INFO     | ..............................
[2024-06-21 17:25:01] 2024-06-21 15:24:39,104 | INFO     | . Timing measurements:
[2024-06-21 17:25:01] 2024-06-21 15:24:39,104 | INFO     | . get job = 0 s
[2024-06-21 17:25:01] 2024-06-21 15:24:39,104 | INFO     | . initial setup = 1 s
[2024-06-21 17:25:01] 2024-06-21 15:24:39,105 | INFO     | . payload setup = 7 s
[2024-06-21 17:25:01] 2024-06-21 15:24:39,105 | INFO     | . stage-in = 0 s
[2024-06-21 17:25:01] 2024-06-21 15:24:39,105 | INFO     | . payload execution = 16467 s
[2024-06-21 17:25:01] 2024-06-21 15:24:39,105 | INFO     | . stage-out = 0 s
[2024-06-21 17:25:01] 2024-06-21 15:24:39,105 | INFO     | . log creation = 0 s
[2024-06-21 17:25:01] 2024-06-21 15:24:39,105 | INFO     | ..............................
[2024-06-21 17:25:01] 2024-06-21 15:24:39,209 | WARNING  | process 3125093 is no longer using CPU - aborting
[2024-06-21 17:25:01] 2024-06-21 15:24:39,209 | INFO     | aborting job monitoring since job object (job id=6238833639) has expired
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | 
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | job summary report
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | --------------------------------------------------
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | PanDA job id: 6238833639
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | task id: 40024023
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | errors: (none)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | pilot state: finished 
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | transexitcode: 0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | exeerrorcode: 0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,288 | INFO     | exeerrordiag: 
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | exitcode: 0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | exitmsg: OK
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | cpuconsumptiontime: 62667 s
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | nevents: 400
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | neventsw: 0
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | pid: 3125093
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | pgrp: 3125093
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | corecount: 4
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | event service: False
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | sizes: {0: 2386899, 1: 2386899, 6: 2387133, 11: 2387161, 16478: 2418749, 16479: 2427915, 16486: 2428029}
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | --------------------------------------------------
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | 
[2024-06-21 17:25:01] 2024-06-21 15:24:39,289 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-06-21 17:25:01] 2024-06-21 15:24:39,311 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,311 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,311 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,311 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | job 6238833639 has completed (purged errors)
[2024-06-21 17:25:01] 2024-06-21 15:24:39,312 | INFO     | overall cleanup function is called
[2024-06-21 17:25:01] 2024-06-21 15:24:40,318 | INFO     | --- collectZombieJob: --- 10, [3125093]
[2024-06-21 17:25:01] 2024-06-21 15:24:40,319 | INFO     | zombie collector waiting for pid 3125093
[2024-06-21 17:25:01] 2024-06-21 15:24:40,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 17:25:01] 2024-06-21 15:24:41,323 | INFO     | collected zombie processes
[2024-06-21 17:25:01] 2024-06-21 15:24:41,324 | INFO     | will now attempt to kill all subprocesses of pid=3125093
[2024-06-21 17:25:01] 2024-06-21 15:24:41,473 | INFO     | process IDs to be killed: [3125093] (in reverse order)
[2024-06-21 17:25:01] 2024-06-21 15:24:41,575 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 17:25:01] 2024-06-21 15:24:41,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 17:25:01] 2024-06-21 15:24:41,582 | INFO     | did not find any defunct processes belonging to 3125093
[2024-06-21 17:25:01] 2024-06-21 15:24:41,588 | INFO     | did not find any defunct processes belonging to 3125093
[2024-06-21 17:25:01] 2024-06-21 15:24:41,588 | INFO     | ready for new job
[2024-06-21 17:25:01] 2024-06-21 15:24:41,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 17:25:01] 2024-06-21 15:24:41,590 | INFO     | *************************************
[2024-06-21 17:25:01] 2024-06-21 15:24:41,590 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 17:25:01] 2024-06-21 15:24:41,590 | INFO     | *************************************
[2024-06-21 17:25:01] 2024-06-21 15:24:41,590 | INFO     | 
[2024-06-21 17:25:01] 2024-06-21 15:24:41,593 | INFO     | architecture information:
[2024-06-21 17:25:01] 2024-06-21 15:24:41,593 | INFO     | executing command: cat /etc/os-release
[2024-06-21 17:25:01] 2024-06-21 15:24:41,608 | INFO     | cat /etc/os-release:
[2024-06-21 17:25:01] NAME="CentOS Linux"
[2024-06-21 17:25:01] VERSION="7 (Core)"
[2024-06-21 17:25:01] ID="centos"
[2024-06-21 17:25:01] ID_LIKE="rhel fedora"
[2024-06-21 17:25:01] VERSION_ID="7"
[2024-06-21 17:25:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 17:25:01] ANSI_COLOR="0;31"
[2024-06-21 17:25:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 17:25:01] HOME_URL="https://www.centos.org/"
[2024-06-21 17:25:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 17:25:01] 
[2024-06-21 17:25:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 17:25:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 17:25:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 17:25:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 17:25:01] 
[2024-06-21 17:25:01] 2024-06-21 15:24:41,608 | INFO     | *************************************
[2024-06-21 17:25:01] 2024-06-21 15:24:42,111 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-06-21 17:25:01] 2024-06-21 15:24:42,128 | INFO     | sufficient remaining disk space (660808400896 B)
[2024-06-21 17:25:01] 2024-06-21 15:24:42,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 17:25:01] 2024-06-21 15:24:42,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 17:25:01] 2024-06-21 15:24:42,147 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 17:25:01] 2024-06-21 15:24:42,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 17:25:01] 2024-06-21 15:24:42,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 17:25:01] 2024-06-21 15:24:42,285 | INFO     | all data control threads have been joined
[2024-06-21 17:25:01] 2024-06-21 15:24:42,703 | INFO     | all payload control threads have been joined
[2024-06-21 17:25:01] 2024-06-21 15:24:42,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 17:25:01] 2024-06-21 15:24:42,713 | INFO     | aborting loop
[2024-06-21 17:25:01] 2024-06-21 15:24:42,808 | INFO     | all job control threads have been joined
[2024-06-21 17:25:01] 2024-06-21 15:24:42,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 17:25:01] 2024-06-21 15:24:43,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 17:25:01] 2024-06-21 15:24:43,134 | INFO     | [job] retrieve thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:43,291 | INFO     | [data] control thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:43,499 | INFO     | [data] copytool_in thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:43,680 | INFO     | [payload] validate_post thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:43,709 | INFO     | [payload] control thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:43,718 | INFO     | [job] job monitor thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:43,813 | INFO     | [job] control thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:43,896 | INFO     | [payload] failed_post thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:43,985 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:44,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 17:25:01] 2024-06-21 15:24:44,384 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:44,491 | INFO     | [job] validate thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:44,563 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:44,903 | INFO     | [data] copytool_out thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:45,221 | INFO     | [job] queue monitor thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:47,042 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:53,002 | INFO     | job.realtimelogging is not enabled
[2024-06-21 17:25:01] 2024-06-21 15:24:54,007 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 17:25:01] 2024-06-21 15:24:54,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47652420461632)>', '<ExcThread(monitor, started 47652811073280)>']
[2024-06-21 17:25:01] 2024-06-21 15:24:55,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 17:25:01] 2024-06-21 15:24:55,213 | INFO     | [monitor] control thread has ended
[2024-06-21 17:25:01] 2024-06-21 15:24:59,968 | INFO     | all workflow threads have been joined
[2024-06-21 17:25:01] 2024-06-21 15:24:59,968 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 17:25:01] 2024-06-21 15:24:59,969 | INFO     | traces error code: 0
[2024-06-21 17:25:01] 2024-06-21 15:24:59,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 17:25:01] 2024-06-21 15:25:00,097 [wrapper] ==== pilot stdout END ====
[2024-06-21 17:25:01] 2024-06-21 15:25:00,099 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 17:25:01] 2024-06-21 15:25:00,101 [wrapper] pilotpid: 3115862
[2024-06-21 17:25:01] 2024-06-21 15:25:00,103 [wrapper] Pilot exit status: 0
[2024-06-21 17:25:01] 2024-06-21 15:25:00,130 [wrapper] pandaids: 6238833639
[2024-06-21 17:25:01] 2024-06-21 15:25:00,191 [wrapper] cleanup supervisor_pilot 3723041 3115863
[2024-06-21 17:25:01] 2024-06-21 15:25:00,194 [wrapper] Test setup, not cleaning
[2024-06-21 17:25:01] 2024-06-21 15:25:00,196 [wrapper] ==== wrapper stdout END ====
[2024-06-21 17:25:01] 2024-06-21 15:25:00,198 [wrapper] ==== wrapper stderr END ====
[2024-06-21 17:25:01] 2024-06-21 15:25:00,202 [wrapper] apfmon messages muted
[2024-06-21 17:25:01]  *** Error codes and diagnostics ***
[2024-06-21 17:25:01]     "exeErrorCode": 0,
[2024-06-21 17:25:01]     "exeErrorDiag": "",
[2024-06-21 17:25:01]     "pilotErrorCode": 0,
[2024-06-21 17:25:01]     "pilotErrorDiag": "",
[2024-06-21 17:25:01]  *** Listing of results directory ***
[2024-06-21 17:25:01] total 839464
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc    469766 Jun 20 12:33 pilot3.tar.gz
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc      5654 Jun 20 12:42 queuedata.json
[2024-06-21 17:25:01] -rwx------ 1 boinc boinc     32308 Jun 20 12:43 runpilot2-wrapper.sh
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc       100 Jun 21 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 17:25:01] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 12:49 run_atlas
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc       105 Jun 21 12:49 job.xml
[2024-06-21 17:25:01] -rw-r--r-- 2 boinc boinc    482484 Jun 21 12:49 input.tar.gz
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc      6661 Jun 21 12:49 init_data.xml
[2024-06-21 17:25:01] -rw-r--r-- 2 boinc boinc 595868281 Jun 21 12:49 EVNT.40024021._000046.pool.root.1
[2024-06-21 17:25:01] -rw-r--r-- 2 boinc boinc     17537 Jun 21 12:49 start_atlas.sh
[2024-06-21 17:25:01] drwxrwx--x 2 boinc boinc      4096 Jun 21 12:49 shared
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc         0 Jun 21 12:49 boinc_lockfile
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc      2523 Jun 21 12:49 pandaJob.out
[2024-06-21 17:25:01] -rw------- 1 boinc boinc       424 Jun 21 12:49 setup.sh.local
[2024-06-21 17:25:01] -rw------- 1 boinc boinc   1023819 Jun 21 12:49 agis_schedconf.cvmfs.json
[2024-06-21 17:25:01] -rw------- 1 boinc boinc   1321251 Jun 21 12:49 cric_ddmendpoints.json
[2024-06-21 17:25:01] drwx------ 4 boinc boinc      4096 Jun 21 12:49 pilot3
[2024-06-21 17:25:01] -rw------- 1 boinc boinc 255785737 Jun 21 17:23 HITS.40024023._000561.pool.root.1
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc       532 Jun 21 17:24 boinc_task_state.xml
[2024-06-21 17:25:01] -rw------- 1 boinc boinc      1060 Jun 21 17:24 memory_monitor_summary.json
[2024-06-21 17:25:01] -rw------- 1 boinc boinc        95 Jun 21 17:24 pilot_heartbeat.json
[2024-06-21 17:25:01] -rw------- 1 boinc boinc         0 Jun 21 17:24 agis_ddmendpoints.agis.ALL.json
[2024-06-21 17:25:01] -rw------- 1 boinc boinc    368724 Jun 21 17:24 log.40024023._000561.job.log.tgz.1
[2024-06-21 17:25:01] -rw------- 1 boinc boinc      7772 Jun 21 17:24 heartbeat.json
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc        28 Jun 21 17:24 wrapper_checkpoint.txt
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc      8192 Jun 21 17:24 boinc_mmap_file
[2024-06-21 17:25:01] -rw------- 1 boinc boinc      4293 Jun 21 17:24 pilotlog.txt
[2024-06-21 17:25:01] -rw------- 1 boinc boinc   1842629 Jun 21 17:25 log.40024023._000561.job.log.1
[2024-06-21 17:25:01] -rw------- 1 boinc boinc       357 Jun 21 17:25 output.list
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc       620 Jun 21 17:25 runtime_log
[2024-06-21 17:25:01] -rw------- 1 boinc boinc   2232320 Jun 21 17:25 result.tar.gz
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc     11410 Jun 21 17:25 runtime_log.err
[2024-06-21 17:25:01] -rw------- 1 boinc boinc       659 Jun 21 17:25 FoTNDm6QUe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmq5kKDmYTxiGm.diag
[2024-06-21 17:25:01] -rw-r--r-- 1 boinc boinc     21370 Jun 21 17:25 stderr.txt
[2024-06-21 17:25:01] HITS file was successfully produced:
[2024-06-21 17:25:01] -rw------- 1 boinc boinc 255785737 Jun 21 17:23 shared/HITS.pool.root.1
[2024-06-21 17:25:01]  *** Contents of shared directory: ***
[2024-06-21 17:25:01] total 834376
[2024-06-21 17:25:01] -rw-r--r-- 2 boinc boinc    482484 Jun 21 12:49 input.tar.gz
[2024-06-21 17:25:01] -rw-r--r-- 2 boinc boinc 595868281 Jun 21 12:49 ATLAS.root_0
[2024-06-21 17:25:01] -rw-r--r-- 2 boinc boinc     17537 Jun 21 12:49 start_atlas.sh
[2024-06-21 17:25:01] -rw------- 1 boinc boinc 255785737 Jun 21 17:23 HITS.pool.root.1
[2024-06-21 17:25:01] -rw------- 1 boinc boinc   2232320 Jun 21 17:25 result.tar.gz
17:25:02 (3111526): run_atlas exited; CPU time 62384.878301
17:25:02 (3111526): called boinc_finish(0)

</stderr_txt>
]]>

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