Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:21:01 (2557740): wrapper (7.7.26015): starting
17:21:01 (2557740): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 17:21:01] Arguments: --nthreads 4
[2024-06-24 17:21:01] Threads: 4
[2024-06-24 17:21:01] Checking for CVMFS
[2024-06-24 17:21:01] No cvmfs_config command found, will try listing directly
[2024-06-24 17:21:01] CVMFS is ok
[2024-06-24 17:21:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 17:21:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 17:21:01] Further information can be found at the LHC@home message board.
[2024-06-24 17:21:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 17:21:01] Checking for apptainer binary...
[2024-06-24 17:21:01] which: no apptainer in ((null))
[2024-06-24 17:21:01] apptainer is not installed, using version from CVMFS
[2024-06-24 17:21:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 17:21:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-06-24 17:21:01] apptainer works
[2024-06-24 17:21:01] Set ATHENA_PROC_NUMBER=4
[2024-06-24 17:21:01] Set ATHENA_CORE_NUMBER=4
[2024-06-24 17:21:01] Starting ATLAS job with PandaID=6238833458
[2024-06-24 17:21:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 20:44:30]  *** The last 200 lines of the pilot log: ***
[2024-06-24 20:44:31] 2024-06-24 18:44:10,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 20:44:31] 2024-06-24 18:44:10,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 20:44:31] 2024-06-24 18:44:10,412 | INFO     | fitting pss+swap vs Time
[2024-06-24 20:44:31] 2024-06-24 18:44:10,413 | INFO     | model: linear, x: [1719242492.0, 1719242553.0, 1719242614.0, 1719242675.0, 1719242736.0, 1719242797.0, 1719242858.0, 1719242919.0, 1719242980.0, 1719243041.0, 1719
[2024-06-24 20:44:31] 2024-06-24 18:44:10,413 | INFO     | sum of square deviations: 2480604650.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,415 | INFO     | sum of deviations: 23426489196.50002
[2024-06-24 20:44:31] 2024-06-24 18:44:10,415 | INFO     | mean x: 1719248561.5
[2024-06-24 20:44:31] 2024-06-24 18:44:10,415 | INFO     | mean y: 2360797.245
[2024-06-24 20:44:31] 2024-06-24 18:44:10,415 | INFO     | -- intersect: -16233986196.653423
[2024-06-24 20:44:31] 2024-06-24 18:44:10,415 | INFO     | intersect: -16233986196.653423
[2024-06-24 20:44:31] 2024-06-24 18:44:10,415 | INFO     | chi2: 4.639769968618843
[2024-06-24 20:44:31] 2024-06-24 18:44:10,416 | INFO     | model: linear, x: [1719242492.0, 1719242553.0, 1719242614.0, 1719242675.0, 1719242736.0, 1719242797.0, 1719242858.0, 1719242919.0, 1719242980.0, 1719243041.0, 1719
[2024-06-24 20:44:31] 2024-06-24 18:44:10,416 | INFO     | sum of square deviations: 2299168690.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,417 | INFO     | sum of deviations: 35594922215.00001
[2024-06-24 20:44:31] 2024-06-24 18:44:10,418 | INFO     | mean x: 1719248409.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,418 | INFO     | mean y: 2370813.3641025643
[2024-06-24 20:44:31] 2024-06-24 18:44:10,418 | INFO     | -- intersect: -26614429273.026043
[2024-06-24 20:44:31] 2024-06-24 18:44:10,418 | INFO     | intersect: -26614429273.026043
[2024-06-24 20:44:31] 2024-06-24 18:44:10,418 | INFO     | chi2: 3.918588358725539
[2024-06-24 20:44:31] 2024-06-24 18:44:10,419 | INFO     | current chi2=3.918588358725539 (change=15.543477689002419 %)
[2024-06-24 20:44:31] 2024-06-24 18:44:10,419 | INFO     | right removable region: 194
[2024-06-24 20:44:31] 2024-06-24 18:44:10,419 | INFO     | model: linear, x: [1719242797.0, 1719242858.0, 1719242919.0, 1719242980.0, 1719243041.0, 1719243102.0, 1719243163.0, 1719243224.0, 1719243285.0, 1719243346.0, 1719
[2024-06-24 20:44:31] 2024-06-24 18:44:10,419 | INFO     | sum of square deviations: 2299168690.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,421 | INFO     | sum of deviations: -21004004889.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,421 | INFO     | mean x: 1719248714.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,421 | INFO     | mean y: 2398014.482051282
[2024-06-24 20:44:31] 2024-06-24 18:44:10,421 | INFO     | -- intersect: 15708556745.385334
[2024-06-24 20:44:31] 2024-06-24 18:44:10,421 | INFO     | intersect: 15708556745.385334
[2024-06-24 20:44:31] 2024-06-24 18:44:10,421 | INFO     | chi2: 2.284397359376175
[2024-06-24 20:44:31] 2024-06-24 18:44:10,422 | INFO     | current chi2=2.284397359376175 (change=50.76485742123571 %)
[2024-06-24 20:44:31] 2024-06-24 18:44:10,422 | INFO     | model: linear, x: [1719243102.0, 1719243163.0, 1719243224.0, 1719243285.0, 1719243346.0, 1719243407.0, 1719243468.0, 1719243529.0, 1719243590.0, 1719243651.0, 1719
[2024-06-24 20:44:31] 2024-06-24 18:44:10,422 | INFO     | sum of square deviations: 2126802667.5
[2024-06-24 20:44:31] 2024-06-24 18:44:10,423 | INFO     | sum of deviations: -54141338516.500015
[2024-06-24 20:44:31] 2024-06-24 18:44:10,424 | INFO     | mean x: 1719248866.5
[2024-06-24 20:44:31] 2024-06-24 18:44:10,424 | INFO     | mean y: 2427334.236842105
[2024-06-24 20:44:31] 2024-06-24 18:44:10,424 | INFO     | -- intersect: 43768798468.56561
[2024-06-24 20:44:31] 2024-06-24 18:44:10,424 | INFO     | intersect: 43768798468.56561
[2024-06-24 20:44:31] 2024-06-24 18:44:10,424 | INFO     | chi2: 1.0468665861743167
[2024-06-24 20:44:31] 2024-06-24 18:44:10,425 | INFO     | current chi2=1.0468665861743167 (change=54.17318349290178 %)
[2024-06-24 20:44:31] 2024-06-24 18:44:10,425 | INFO     | model: linear, x: [1719243407.0, 1719243468.0, 1719243529.0, 1719243590.0, 1719243651.0, 1719243712.0, 1719243773.0, 1719243834.0, 1719243895.0, 1719243956.0, 1719
[2024-06-24 20:44:31] 2024-06-24 18:44:10,425 | INFO     | sum of square deviations: 1963274020.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,426 | INFO     | sum of deviations: -57162779932.999985
[2024-06-24 20:44:31] 2024-06-24 18:44:10,426 | INFO     | mean x: 1719249019.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,426 | INFO     | mean y: 2430069.0864864867
[2024-06-24 20:44:31] 2024-06-24 18:44:10,427 | INFO     | -- intersect: 50060166443.10681
[2024-06-24 20:44:31] 2024-06-24 18:44:10,427 | INFO     | intersect: 50060166443.10681
[2024-06-24 20:44:31] 2024-06-24 18:44:10,427 | INFO     | chi2: 0.9693461705522133
[2024-06-24 20:44:31] 2024-06-24 18:44:10,427 | INFO     | current chi2=0.9693461705522133 (change=7.404994738192483 %)
[2024-06-24 20:44:31] 2024-06-24 18:44:10,427 | INFO     | left removable region: 30
[2024-06-24 20:44:31] 2024-06-24 18:44:10,428 | INFO     | model: linear, x: [1719244322.0, 1719244383.0, 1719244444.0, 1719244505.0, 1719244566.0, 1719244627.0, 1719244688.0, 1719244749.0, 1719244810.0, 1719244871.0, 1719
[2024-06-24 20:44:31] 2024-06-24 18:44:10,428 | INFO     | sum of square deviations: 1367709365.0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,429 | INFO     | sum of deviations: -27918565613.5
[2024-06-24 20:44:31] 2024-06-24 18:44:10,429 | INFO     | mean x: 1719249293.5
[2024-06-24 20:44:31] 2024-06-24 18:44:10,429 | INFO     | mean y: 2425544.4573170734
[2024-06-24 20:44:31] 2024-06-24 18:44:10,429 | INFO     | -- intersect: 35096850891.57283
[2024-06-24 20:44:31] 2024-06-24 18:44:10,429 | INFO     | intersect: 35096850891.57283
[2024-06-24 20:44:31] 2024-06-24 18:44:10,430 | INFO     | chi2: 0.17756316878764045
[2024-06-24 20:44:31] 2024-06-24 18:44:10,430 | INFO     | -- intersect: 35096850891.57283
[2024-06-24 20:44:31] 2024-06-24 18:44:10,430 | INFO     | current memory leak: -20.41 B/s (using 164 data points, chi2=0.18)
[2024-06-24 20:44:31] 2024-06-24 18:44:10,430 | INFO     | ..............................
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | . Timing measurements:
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | . get job = 0 s
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | . initial setup = 1 s
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | . payload setup = 4 s
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | . stage-in = 0 s
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | . payload execution = 12147 s
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | . stage-out = 0 s
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | . log creation = 0 s
[2024-06-24 20:44:31] 2024-06-24 18:44:10,431 | INFO     | ..............................
[2024-06-24 20:44:31] 2024-06-24 18:44:10,511 | INFO     | 
[2024-06-24 20:44:31] 2024-06-24 18:44:10,511 | INFO     | job summary report
[2024-06-24 20:44:31] 2024-06-24 18:44:10,511 | INFO     | --------------------------------------------------
[2024-06-24 20:44:31] 2024-06-24 18:44:10,511 | INFO     | PanDA job id: 6238833458
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | task id: 40024023
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | errors: (none)
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | pilot state: finished 
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | transexitcode: 0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | exeerrorcode: 0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | exeerrordiag: 
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | exitcode: 0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | exitmsg: OK
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | cpuconsumptiontime: 45536 s
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | nevents: 400
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | neventsw: 0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,512 | INFO     | pid: 2568852
[2024-06-24 20:44:31] 2024-06-24 18:44:10,513 | INFO     | pgrp: 2568852
[2024-06-24 20:44:31] 2024-06-24 18:44:10,513 | INFO     | corecount: 4
[2024-06-24 20:44:31] 2024-06-24 18:44:10,513 | INFO     | event service: False
[2024-06-24 20:44:31] 2024-06-24 18:44:10,513 | INFO     | sizes: {0: 2386740, 1: 2386939, 4: 2387145, 11: 2387173, 12156: 2416948, 12157: 2425928, 12160: 2426112, 12167: 2426282}
[2024-06-24 20:44:31] 2024-06-24 18:44:10,513 | INFO     | --------------------------------------------------
[2024-06-24 20:44:31] 2024-06-24 18:44:10,513 | INFO     | 
[2024-06-24 20:44:31] 2024-06-24 18:44:10,513 | INFO     | executing command: ls -lF /scratch/boinc/var/slot8/slots/0
[2024-06-24 20:44:31] 2024-06-24 18:44:10,533 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,533 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,533 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,535 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 20:44:31] 2024-06-24 18:44:10,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,535 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 20:44:31] 2024-06-24 18:44:10,535 | INFO     | job 6238833458 has completed (purged errors)
[2024-06-24 20:44:31] 2024-06-24 18:44:10,535 | INFO     | overall cleanup function is called
[2024-06-24 20:44:31] 2024-06-24 18:44:11,542 | INFO     | --- collectZombieJob: --- 10, [2568852]
[2024-06-24 20:44:31] 2024-06-24 18:44:11,543 | INFO     | zombie collector waiting for pid 2568852
[2024-06-24 20:44:31] 2024-06-24 18:44:11,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 20:44:31] 2024-06-24 18:44:12,548 | INFO     | collected zombie processes
[2024-06-24 20:44:31] 2024-06-24 18:44:12,548 | INFO     | will now attempt to kill all subprocesses of pid=2568852
[2024-06-24 20:44:31] 2024-06-24 18:44:12,641 | INFO     | process IDs to be killed: [2568852] (in reverse order)
[2024-06-24 20:44:31] 2024-06-24 18:44:12,715 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 20:44:31] 2024-06-24 18:44:12,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 20:44:31] 2024-06-24 18:44:12,718 | INFO     | did not find any defunct processes belonging to 2568852
[2024-06-24 20:44:31] 2024-06-24 18:44:12,721 | INFO     | did not find any defunct processes belonging to 2568852
[2024-06-24 20:44:31] 2024-06-24 18:44:12,721 | INFO     | ready for new job
[2024-06-24 20:44:31] 2024-06-24 18:44:12,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 20:44:31] 2024-06-24 18:44:12,723 | INFO     | *************************************
[2024-06-24 20:44:31] 2024-06-24 18:44:12,723 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 20:44:31] 2024-06-24 18:44:12,723 | INFO     | *************************************
[2024-06-24 20:44:31] 2024-06-24 18:44:12,723 | INFO     | 
[2024-06-24 20:44:31] 2024-06-24 18:44:12,725 | INFO     | architecture information:
[2024-06-24 20:44:31] 2024-06-24 18:44:12,725 | INFO     | executing command: cat /etc/os-release
[2024-06-24 20:44:31] 2024-06-24 18:44:12,738 | INFO     | cat /etc/os-release:
[2024-06-24 20:44:31] NAME="CentOS Linux"
[2024-06-24 20:44:31] VERSION="7 (Core)"
[2024-06-24 20:44:31] ID="centos"
[2024-06-24 20:44:31] ID_LIKE="rhel fedora"
[2024-06-24 20:44:31] VERSION_ID="7"
[2024-06-24 20:44:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 20:44:31] ANSI_COLOR="0;31"
[2024-06-24 20:44:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 20:44:31] HOME_URL="https://www.centos.org/"
[2024-06-24 20:44:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 20:44:31] 
[2024-06-24 20:44:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 20:44:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 20:44:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 20:44:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 20:44:31] 
[2024-06-24 20:44:31] 2024-06-24 18:44:12,738 | INFO     | *************************************
[2024-06-24 20:44:31] 2024-06-24 18:44:13,241 | INFO     | executing command: df -mP /scratch/boinc/var/slot8/slots/0
[2024-06-24 20:44:31] 2024-06-24 18:44:13,260 | INFO     | sufficient remaining disk space (1674381885440 B)
[2024-06-24 20:44:31] 2024-06-24 18:44:13,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 20:44:31] 2024-06-24 18:44:13,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 20:44:31] 2024-06-24 18:44:13,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 20:44:31] 2024-06-24 18:44:13,495 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 20:44:31] 2024-06-24 18:44:13,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 20:44:31] 2024-06-24 18:44:13,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 20:44:31] 2024-06-24 18:44:13,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 20:44:31] 2024-06-24 18:44:13,595 | INFO     | aborting loop
[2024-06-24 20:44:31] 2024-06-24 18:44:13,884 | INFO     | all data control threads have been joined
[2024-06-24 20:44:31] 2024-06-24 18:44:14,036 | INFO     | all job control threads have been joined
[2024-06-24 20:44:31] 2024-06-24 18:44:14,266 | INFO     | [job] retrieve thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:14,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 20:44:31] 2024-06-24 18:44:14,588 | INFO     | all payload control threads have been joined
[2024-06-24 20:44:31] 2024-06-24 18:44:14,601 | INFO     | [job] job monitor thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:14,751 | INFO     | [data] copytool_in thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:14,757 | INFO     | [payload] validate_post thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:14,889 | INFO     | [data] control thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:15,042 | INFO     | [job] control thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:15,224 | INFO     | [job] validate thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:15,264 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:15,370 | INFO     | [data] copytool_out thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:15,469 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:15,477 | INFO     | [payload] failed_post thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:15,484 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:15,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 20:44:31] 2024-06-24 18:44:15,594 | INFO     | [payload] control thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:16,523 | INFO     | [job] queue monitor thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:18,315 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:23,318 | INFO     | job.realtimelogging is not enabled
[2024-06-24 20:44:31] 2024-06-24 18:44:24,323 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 20:44:31] 2024-06-24 18:44:25,099 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47383812486208)>', '<ExcThread(monitor, started 47383992760064)>']
[2024-06-24 20:44:31] 2024-06-24 18:44:25,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 20:44:31] 2024-06-24 18:44:25,554 | INFO     | [monitor] control thread has ended
[2024-06-24 20:44:31] 2024-06-24 18:44:30,124 | INFO     | all workflow threads have been joined
[2024-06-24 20:44:31] 2024-06-24 18:44:30,125 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 20:44:31] 2024-06-24 18:44:30,125 | INFO     | traces error code: 0
[2024-06-24 20:44:31] 2024-06-24 18:44:30,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 20:44:31] 2024-06-24 18:44:30,214 [wrapper] ==== pilot stdout END ====
[2024-06-24 20:44:31] 2024-06-24 18:44:30,217 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 20:44:31] 2024-06-24 18:44:30,220 [wrapper] pilotpid: 2562018
[2024-06-24 20:44:31] 2024-06-24 18:44:30,223 [wrapper] Pilot exit status: 0
[2024-06-24 20:44:31] 2024-06-24 18:44:30,233 [wrapper] pandaids: 6238833458
[2024-06-24 20:44:31] 2024-06-24 18:44:30,283 [wrapper] cleanup supervisor_pilot 2733330 2562019
[2024-06-24 20:44:31] 2024-06-24 18:44:30,286 [wrapper] Test setup, not cleaning
[2024-06-24 20:44:31] 2024-06-24 18:44:30,289 [wrapper] ==== wrapper stdout END ====
[2024-06-24 20:44:31] 2024-06-24 18:44:30,292 [wrapper] ==== wrapper stderr END ====
[2024-06-24 20:44:31] 2024-06-24 18:44:30,299 [wrapper] apfmon messages muted
[2024-06-24 20:44:31]  *** Error codes and diagnostics ***
[2024-06-24 20:44:31]     "exeErrorCode": 0,
[2024-06-24 20:44:31]     "exeErrorDiag": "",
[2024-06-24 20:44:31]     "pilotErrorCode": 0,
[2024-06-24 20:44:31]     "pilotErrorDiag": "",
[2024-06-24 20:44:31]  *** Listing of results directory ***
[2024-06-24 20:44:31] total 850952
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:38 pilot3.tar.gz
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc      5654 Jun 20 12:11 queuedata.json
[2024-06-24 20:44:31] -rwx------ 1 boinc boinc     32308 Jun 20 12:12 runpilot2-wrapper.sh
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc       100 Jun 24 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 20:44:31] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 17:20 run_atlas
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc       105 Jun 24 17:20 job.xml
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc      6454 Jun 24 17:21 init_data.xml
[2024-06-24 20:44:31] -rw-r--r-- 2 boinc boinc 599286378 Jun 24 17:21 EVNT.40024021._000040.pool.root.1
[2024-06-24 20:44:31] -rw-r--r-- 2 boinc boinc     17537 Jun 24 17:21 start_atlas.sh
[2024-06-24 20:44:31] drwxrwx--x 2 boinc boinc      4096 Jun 24 17:21 shared
[2024-06-24 20:44:31] -rw-r--r-- 2 boinc boinc    482486 Jun 24 17:21 input.tar.gz
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc         0 Jun 24 17:21 boinc_lockfile
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc      2516 Jun 24 17:21 pandaJob.out
[2024-06-24 20:44:31] -rw------- 1 boinc boinc       424 Jun 24 17:21 setup.sh.local
[2024-06-24 20:44:31] -rw------- 1 boinc boinc   1019388 Jun 24 17:21 agis_schedconf.cvmfs.json
[2024-06-24 20:44:31] -rw------- 1 boinc boinc   1321363 Jun 24 17:21 cric_ddmendpoints.json
[2024-06-24 20:44:31] drwx------ 4 boinc boinc      4096 Jun 24 17:21 pilot3
[2024-06-24 20:44:31] -rw------- 1 boinc boinc 265465681 Jun 24 20:43 HITS.40024023._000410.pool.root.1
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc       531 Jun 24 20:43 boinc_task_state.xml
[2024-06-24 20:44:31] -rw------- 1 boinc boinc        95 Jun 24 20:43 pilot_heartbeat.json
[2024-06-24 20:44:31] -rw------- 1 boinc boinc      1037 Jun 24 20:43 memory_monitor_summary.json
[2024-06-24 20:44:31] -rw------- 1 boinc boinc         0 Jun 24 20:43 agis_ddmendpoints.agis.ALL.json
[2024-06-24 20:44:31] -rw------- 1 boinc boinc    313534 Jun 24 20:44 log.40024023._000410.job.log.tgz.1
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc        28 Jun 24 20:44 wrapper_checkpoint.txt
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc      8192 Jun 24 20:44 boinc_mmap_file
[2024-06-24 20:44:31] -rw------- 1 boinc boinc      7758 Jun 24 20:44 heartbeat.json
[2024-06-24 20:44:31] -rw------- 1 boinc boinc      4293 Jun 24 20:44 pilotlog.txt
[2024-06-24 20:44:31] -rw------- 1 boinc boinc   1231429 Jun 24 20:44 log.40024023._000410.job.log.1
[2024-06-24 20:44:31] -rw------- 1 boinc boinc       357 Jun 24 20:44 output.list
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc       620 Jun 24 20:44 runtime_log
[2024-06-24 20:44:31] -rw------- 1 boinc boinc   1566720 Jun 24 20:44 result.tar.gz
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc     11391 Jun 24 20:44 runtime_log.err
[2024-06-24 20:44:31] -rw------- 1 boinc boinc       658 Jun 24 20:44 QTCODm7wTe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm04kKDmylcVkm.diag
[2024-06-24 20:44:31] -rw-r--r-- 1 boinc boinc     21271 Jun 24 20:44 stderr.txt
[2024-06-24 20:44:31] HITS file was successfully produced:
[2024-06-24 20:44:31] -rw------- 1 boinc boinc 265465681 Jun 24 20:43 shared/HITS.pool.root.1
[2024-06-24 20:44:31]  *** Contents of shared directory: ***
[2024-06-24 20:44:31] total 846520
[2024-06-24 20:44:31] -rw-r--r-- 2 boinc boinc 599286378 Jun 24 17:21 ATLAS.root_0
[2024-06-24 20:44:31] -rw-r--r-- 2 boinc boinc     17537 Jun 24 17:21 start_atlas.sh
[2024-06-24 20:44:31] -rw-r--r-- 2 boinc boinc    482486 Jun 24 17:21 input.tar.gz
[2024-06-24 20:44:31] -rw------- 1 boinc boinc 265465681 Jun 24 20:43 HITS.pool.root.1
[2024-06-24 20:44:31] -rw------- 1 boinc boinc   1566720 Jun 24 20:44 result.tar.gz
20:44:32 (2557740): run_atlas exited; CPU time 45401.652557
20:44:32 (2557740): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN