Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:42:43 (1694809): wrapper (7.7.26015): starting
05:42:43 (1694809): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 05:42:43] Arguments: --nthreads 4
[2024-06-24 05:42:43] Threads: 4
[2024-06-24 05:42:43] Checking for CVMFS
[2024-06-24 05:42:43] No cvmfs_config command found, will try listing directly
[2024-06-24 05:42:43] CVMFS is ok
[2024-06-24 05:42:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 05:42:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 05:42:43] Further information can be found at the LHC@home message board.
[2024-06-24 05:42:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 05:42:43] Checking for apptainer binary...
[2024-06-24 05:42:43] which: no apptainer in ((null))
[2024-06-24 05:42:43] apptainer is not installed, using version from CVMFS
[2024-06-24 05:42:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 05:42:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-06-24 05:42:43] apptainer works
[2024-06-24 05:42:43] Set ATHENA_PROC_NUMBER=4
[2024-06-24 05:42:43] Set ATHENA_CORE_NUMBER=4
[2024-06-24 05:42:43] Starting ATLAS job with PandaID=6238833450
[2024-06-24 05:42:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 09:42:06]  *** The last 200 lines of the pilot log: ***
[2024-06-24 09:42:06] 2024-06-24 07:41:52,008 | INFO     | model: linear, x: [1719200592.0, 1719200653.0, 1719200714.0, 1719200775.0, 1719200836.0, 1719200897.0, 1719200958.0, 1719201019.0, 1719201080.0, 1719201141.0, 1719
[2024-06-24 09:42:06] 2024-06-24 07:41:52,008 | INFO     | sum of square deviations: 3772712597.5
[2024-06-24 09:42:06] 2024-06-24 07:41:52,009 | INFO     | sum of deviations: 99508029492.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,009 | INFO     | mean x: 1719207576.5
[2024-06-24 09:42:06] 2024-06-24 07:41:52,009 | INFO     | mean y: 2320959.5739130434
[2024-06-24 09:42:06] 2024-06-24 07:41:52,009 | INFO     | -- intersect: -45343025075.688675
[2024-06-24 09:42:06] 2024-06-24 07:41:52,009 | INFO     | intersect: -45343025075.688675
[2024-06-24 09:42:06] 2024-06-24 07:41:52,010 | INFO     | chi2: 3.831303136082504
[2024-06-24 09:42:06] 2024-06-24 07:41:52,010 | INFO     | current chi2=3.831303136082504 (change=-0.018554740371794422 %)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,010 | INFO     | right removable region: 229
[2024-06-24 09:42:06] 2024-06-24 07:41:52,010 | INFO     | model: linear, x: [1719200897.0, 1719200958.0, 1719201019.0, 1719201080.0, 1719201141.0, 1719201202.0, 1719201263.0, 1719201324.0, 1719201385.0, 1719201446.0, 1719
[2024-06-24 09:42:06] 2024-06-24 07:41:52,010 | INFO     | sum of square deviations: 3772712597.5
[2024-06-24 09:42:06] 2024-06-24 07:41:52,011 | INFO     | sum of deviations: 47936221486.5
[2024-06-24 09:42:06] 2024-06-24 07:41:52,011 | INFO     | mean x: 1719207881.5
[2024-06-24 09:42:06] 2024-06-24 07:41:52,012 | INFO     | mean y: 2355095.152173913
[2024-06-24 09:42:06] 2024-06-24 07:41:52,012 | INFO     | -- intersect: -21841961867.537018
[2024-06-24 09:42:06] 2024-06-24 07:41:52,012 | INFO     | intersect: -21841961867.537018
[2024-06-24 09:42:06] 2024-06-24 07:41:52,012 | INFO     | chi2: 1.4414814875607713
[2024-06-24 09:42:06] 2024-06-24 07:41:52,012 | INFO     | current chi2=1.4414814875607713 (change=62.369227923257476 %)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,012 | INFO     | model: linear, x: [1719201202.0, 1719201263.0, 1719201324.0, 1719201385.0, 1719201446.0, 1719201507.0, 1719201568.0, 1719201629.0, 1719201690.0, 1719201751.0, 1719
[2024-06-24 09:42:06] 2024-06-24 07:41:52,012 | INFO     | sum of square deviations: 3531973200.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,013 | INFO     | sum of deviations: 5122224350.999999
[2024-06-24 09:42:06] 2024-06-24 07:41:52,013 | INFO     | mean x: 1719208034.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,013 | INFO     | mean y: 2382218.2044444443
[2024-06-24 09:42:06] 2024-06-24 07:41:52,013 | INFO     | -- intersect: -2490889603.95707
[2024-06-24 09:42:06] 2024-06-24 07:41:52,013 | INFO     | intersect: -2490889603.95707
[2024-06-24 09:42:06] 2024-06-24 07:41:52,014 | INFO     | chi2: 0.07577542055849329
[2024-06-24 09:42:06] 2024-06-24 07:41:52,014 | INFO     | current chi2=0.07577542055849329 (change=94.74322624241827 %)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,014 | INFO     | model: linear, x: [1719201507.0, 1719201568.0, 1719201629.0, 1719201690.0, 1719201751.0, 1719201812.0, 1719201873.0, 1719201934.0, 1719201995.0, 1719202056.0, 1719
[2024-06-24 09:42:06] 2024-06-24 07:41:52,014 | INFO     | sum of square deviations: 3301699115.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,015 | INFO     | sum of deviations: -1562801730.4999995
[2024-06-24 09:42:06] 2024-06-24 07:41:52,015 | INFO     | mean x: 1719208186.5
[2024-06-24 09:42:06] 2024-06-24 07:41:52,015 | INFO     | mean y: 2386613.559090909
[2024-06-24 09:42:06] 2024-06-24 07:41:52,015 | INFO     | -- intersect: 816143844.4180772
[2024-06-24 09:42:06] 2024-06-24 07:41:52,015 | INFO     | intersect: 816143844.4180772
[2024-06-24 09:42:06] 2024-06-24 07:41:52,016 | INFO     | chi2: 0.025942469748394606
[2024-06-24 09:42:06] 2024-06-24 07:41:52,016 | INFO     | current chi2=0.025942469748394606 (change=65.76400426788942 %)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,016 | INFO     | model: linear, x: [1719201812.0, 1719201873.0, 1719201934.0, 1719201995.0, 1719202056.0, 1719202117.0, 1719202178.0, 1719202239.0, 1719202300.0, 1719202361.0, 1719
[2024-06-24 09:42:06] 2024-06-24 07:41:52,016 | INFO     | sum of square deviations: 3081657780.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,017 | INFO     | sum of deviations: -87212919.99999945
[2024-06-24 09:42:06] 2024-06-24 07:41:52,017 | INFO     | mean x: 1719208339.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,017 | INFO     | mean y: 2385587.6511627906
[2024-06-24 09:42:06] 2024-06-24 07:41:52,017 | INFO     | -- intersect: 51040302.10571164
[2024-06-24 09:42:06] 2024-06-24 07:41:52,017 | INFO     | intersect: 51040302.10571164
[2024-06-24 09:42:06] 2024-06-24 07:41:52,017 | INFO     | chi2: 0.024288915532396864
[2024-06-24 09:42:06] 2024-06-24 07:41:52,017 | INFO     | current chi2=0.024288915532396864 (change=6.373927509735531 %)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,017 | INFO     | left removable region: 40
[2024-06-24 09:42:06] 2024-06-24 07:41:52,018 | INFO     | model: linear, x: [1719203032.0, 1719203093.0, 1719203154.0, 1719203215.0, 1719203276.0, 1719203337.0, 1719203398.0, 1719203459.0, 1719203520.0, 1719203581.0, 1719
[2024-06-24 09:42:06] 2024-06-24 07:41:52,018 | INFO     | sum of square deviations: 2093397390.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,018 | INFO     | sum of deviations: 5836375019.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | mean x: 1719208766.0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | mean y: 2380647.3174603176
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | -- intersect: -4790759509.568002
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | intersect: -4790759509.568002
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | chi2: 0.0008212334365958715
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | -- intersect: -4790759509.568002
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | current memory leak: 2.79 B/s (using 189 data points, chi2=0.00)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | ..............................
[2024-06-24 09:42:06] 2024-06-24 07:41:52,019 | INFO     | . Timing measurements:
[2024-06-24 09:42:06] 2024-06-24 07:41:52,020 | INFO     | . get job = 0 s
[2024-06-24 09:42:06] 2024-06-24 07:41:52,020 | INFO     | . initial setup = 1 s
[2024-06-24 09:42:06] 2024-06-24 07:41:52,020 | INFO     | . payload setup = 3 s
[2024-06-24 09:42:06] 2024-06-24 07:41:52,020 | INFO     | . stage-in = 0 s
[2024-06-24 09:42:06] 2024-06-24 07:41:52,020 | INFO     | . payload execution = 14313 s
[2024-06-24 09:42:06] 2024-06-24 07:41:52,020 | INFO     | . stage-out = 0 s
[2024-06-24 09:42:06] 2024-06-24 07:41:52,020 | INFO     | . log creation = 0 s
[2024-06-24 09:42:06] 2024-06-24 07:41:52,020 | INFO     | ..............................
[2024-06-24 09:42:06] 2024-06-24 07:41:52,541 | INFO     | 
[2024-06-24 09:42:06] 2024-06-24 07:41:52,541 | INFO     | job summary report
[2024-06-24 09:42:06] 2024-06-24 07:41:52,541 | INFO     | --------------------------------------------------
[2024-06-24 09:42:06] 2024-06-24 07:41:52,542 | INFO     | PanDA job id: 6238833450
[2024-06-24 09:42:06] 2024-06-24 07:41:52,542 | INFO     | task id: 40024023
[2024-06-24 09:42:06] 2024-06-24 07:41:52,542 | INFO     | errors: (none)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,542 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 09:42:06] 2024-06-24 07:41:52,542 | INFO     | pilot state: finished 
[2024-06-24 09:42:06] 2024-06-24 07:41:52,542 | INFO     | transexitcode: 0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,542 | INFO     | exeerrorcode: 0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,542 | INFO     | exeerrordiag: 
[2024-06-24 09:42:06] 2024-06-24 07:41:52,543 | INFO     | exitcode: 0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,543 | INFO     | exitmsg: OK
[2024-06-24 09:42:06] 2024-06-24 07:41:52,543 | INFO     | cpuconsumptiontime: 54022 s
[2024-06-24 09:42:06] 2024-06-24 07:41:52,543 | INFO     | nevents: 400
[2024-06-24 09:42:06] 2024-06-24 07:41:52,543 | INFO     | neventsw: 0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,543 | INFO     | pid: 1705998
[2024-06-24 09:42:06] 2024-06-24 07:41:52,543 | INFO     | pgrp: 1705998
[2024-06-24 09:42:06] 2024-06-24 07:41:52,543 | INFO     | corecount: 4
[2024-06-24 09:42:06] 2024-06-24 07:41:52,544 | INFO     | event service: False
[2024-06-24 09:42:06] 2024-06-24 07:41:52,544 | INFO     | sizes: {0: 2386858, 1: 2386858, 3: 2387092, 11: 2387120, 14320: 2417850, 14321: 2426830, 14322: 2427014, 14327: 2427184}
[2024-06-24 09:42:06] 2024-06-24 07:41:52,544 | INFO     | --------------------------------------------------
[2024-06-24 09:42:06] 2024-06-24 07:41:52,544 | INFO     | 
[2024-06-24 09:42:06] 2024-06-24 07:41:52,544 | INFO     | executing command: ls -lF /scratch/boinc/var/slot8/slots/0
[2024-06-24 09:42:06] 2024-06-24 07:41:52,566 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,566 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,567 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,567 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,567 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,567 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,567 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,567 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,567 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,568 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,568 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,568 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,568 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,568 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,568 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,569 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,569 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,569 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 09:42:06] 2024-06-24 07:41:52,569 | INFO     | job 6238833450 has completed (purged errors)
[2024-06-24 09:42:06] 2024-06-24 07:41:52,569 | INFO     | overall cleanup function is called
[2024-06-24 09:42:06] 2024-06-24 07:41:53,577 | INFO     | --- collectZombieJob: --- 10, [1705998]
[2024-06-24 09:42:06] 2024-06-24 07:41:53,578 | INFO     | zombie collector waiting for pid 1705998
[2024-06-24 09:42:06] 2024-06-24 07:41:53,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 09:42:06] 2024-06-24 07:41:54,583 | INFO     | collected zombie processes
[2024-06-24 09:42:06] 2024-06-24 07:41:54,583 | INFO     | will now attempt to kill all subprocesses of pid=1705998
[2024-06-24 09:42:06] 2024-06-24 07:41:54,691 | INFO     | process IDs to be killed: [1705998] (in reverse order)
[2024-06-24 09:42:06] 2024-06-24 07:41:54,753 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 09:42:06] 2024-06-24 07:41:54,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 09:42:06] 2024-06-24 07:41:54,757 | INFO     | did not find any defunct processes belonging to 1705998
[2024-06-24 09:42:06] 2024-06-24 07:41:54,761 | INFO     | did not find any defunct processes belonging to 1705998
[2024-06-24 09:42:06] 2024-06-24 07:41:54,761 | INFO     | ready for new job
[2024-06-24 09:42:06] 2024-06-24 07:41:54,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 09:42:06] 2024-06-24 07:41:54,764 | INFO     | *************************************
[2024-06-24 09:42:06] 2024-06-24 07:41:54,764 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 09:42:06] 2024-06-24 07:41:54,764 | INFO     | *************************************
[2024-06-24 09:42:06] 2024-06-24 07:41:54,764 | INFO     | 
[2024-06-24 09:42:06] 2024-06-24 07:41:54,766 | INFO     | architecture information:
[2024-06-24 09:42:06] 2024-06-24 07:41:54,766 | INFO     | executing command: cat /etc/os-release
[2024-06-24 09:42:06] 2024-06-24 07:41:54,777 | INFO     | cat /etc/os-release:
[2024-06-24 09:42:06] NAME="CentOS Linux"
[2024-06-24 09:42:06] VERSION="7 (Core)"
[2024-06-24 09:42:06] ID="centos"
[2024-06-24 09:42:06] ID_LIKE="rhel fedora"
[2024-06-24 09:42:06] VERSION_ID="7"
[2024-06-24 09:42:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 09:42:06] ANSI_COLOR="0;31"
[2024-06-24 09:42:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 09:42:06] HOME_URL="https://www.centos.org/"
[2024-06-24 09:42:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 09:42:06] 
[2024-06-24 09:42:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 09:42:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 09:42:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 09:42:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 09:42:06] 
[2024-06-24 09:42:06] 2024-06-24 07:41:54,778 | INFO     | *************************************
[2024-06-24 09:42:06] 2024-06-24 07:41:55,281 | INFO     | executing command: df -mP /scratch/boinc/var/slot8/slots/0
[2024-06-24 09:42:06] 2024-06-24 07:41:55,298 | INFO     | sufficient remaining disk space (1667306094592 B)
[2024-06-24 09:42:06] 2024-06-24 07:41:55,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 09:42:06] 2024-06-24 07:41:55,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 09:42:06] 2024-06-24 07:41:55,299 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-24 09:42:06] 2024-06-24 07:41:55,300 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 09:42:06] 2024-06-24 07:41:55,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 09:42:06] 2024-06-24 07:41:55,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 09:42:06] 2024-06-24 07:41:55,421 | INFO     | all job control threads have been joined
[2024-06-24 09:42:06] 2024-06-24 07:41:55,506 | INFO     | all data control threads have been joined
[2024-06-24 09:42:06] 2024-06-24 07:41:55,627 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-24 09:42:06] 2024-06-24 07:41:55,627 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-24 09:42:06] 2024-06-24 07:41:55,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 09:42:06] 2024-06-24 07:41:55,628 | INFO     | will abort loop
[2024-06-24 09:42:06] 2024-06-24 07:41:56,305 | INFO     | [job] retrieve thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,427 | INFO     | [job] control thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,468 | INFO     | [job] validate thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,512 | INFO     | [data] control thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,561 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,571 | INFO     | [data] copytool_in thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 09:42:06] 2024-06-24 07:41:56,623 | INFO     | [payload] failed_post thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,632 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,633 | INFO     | [job] job monitor thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:56,800 | INFO     | all payload control threads have been joined
[2024-06-24 09:42:06] 2024-06-24 07:41:56,815 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:57,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 09:42:06] 2024-06-24 07:41:57,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 09:42:06] 2024-06-24 07:41:57,349 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:57,414 | INFO     | [payload] validate_post thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:57,805 | INFO     | [payload] control thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:58,096 | INFO     | [job] queue monitor thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:41:58,597 | INFO     | [data] copytool_out thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:42:01,091 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 09:42:06] 2024-06-24 07:42:01,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47041888375872)>', '<ExcThread(monitor, started 47042072852224)>']
[2024-06-24 09:42:06] 2024-06-24 07:42:01,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 09:42:06] 2024-06-24 07:42:01,329 | INFO     | [monitor] control thread has ended
[2024-06-24 09:42:06] 2024-06-24 07:42:06,170 | INFO     | all workflow threads have been joined
[2024-06-24 09:42:06] 2024-06-24 07:42:06,170 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 09:42:06] 2024-06-24 07:42:06,170 | INFO     | traces error code: 0
[2024-06-24 09:42:06] 2024-06-24 07:42:06,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 09:42:06] 2024-06-24 07:42:06,271 [wrapper] ==== pilot stdout END ====
[2024-06-24 09:42:06] 2024-06-24 07:42:06,274 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 09:42:06] 2024-06-24 07:42:06,277 [wrapper] pilotpid: 1699122
[2024-06-24 09:42:06] 2024-06-24 07:42:06,279 [wrapper] Pilot exit status: 0
[2024-06-24 09:42:06] 2024-06-24 07:42:06,288 [wrapper] pandaids: 6238833450
[2024-06-24 09:42:06] 2024-06-24 07:42:06,338 [wrapper] cleanup supervisor_pilot 1981418 1699123
[2024-06-24 09:42:06] 2024-06-24 07:42:06,341 [wrapper] Test setup, not cleaning
[2024-06-24 09:42:06] 2024-06-24 07:42:06,344 [wrapper] ==== wrapper stdout END ====
[2024-06-24 09:42:06] 2024-06-24 07:42:06,347 [wrapper] ==== wrapper stderr END ====
[2024-06-24 09:42:06] 2024-06-24 07:42:06,353 [wrapper] apfmon messages muted
[2024-06-24 09:42:06]  *** Error codes and diagnostics ***
[2024-06-24 09:42:06]     "exeErrorCode": 0,
[2024-06-24 09:42:06]     "exeErrorDiag": "",
[2024-06-24 09:42:06]     "pilotErrorCode": 0,
[2024-06-24 09:42:06]     "pilotErrorDiag": "",
[2024-06-24 09:42:06]  *** Listing of results directory ***
[2024-06-24 09:42:06] total 848756
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:38 pilot3.tar.gz
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc      5654 Jun 20 12:09 queuedata.json
[2024-06-24 09:42:06] -rwx------ 1 boinc boinc     32308 Jun 20 12:10 runpilot2-wrapper.sh
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc       100 Jun 24 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 09:42:06] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 05:05 run_atlas
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc       105 Jun 24 05:05 job.xml
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc      6454 Jun 24 05:42 init_data.xml
[2024-06-24 09:42:06] -rw-r--r-- 2 boinc boinc 599286378 Jun 24 05:42 EVNT.40024021._000040.pool.root.1
[2024-06-24 09:42:06] -rw-r--r-- 2 boinc boinc     17537 Jun 24 05:42 start_atlas.sh
[2024-06-24 09:42:06] drwxrwx--x 2 boinc boinc      4096 Jun 24 05:42 shared
[2024-06-24 09:42:06] -rw-r--r-- 2 boinc boinc    482485 Jun 24 05:42 input.tar.gz
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc         0 Jun 24 05:42 boinc_lockfile
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc      2514 Jun 24 05:42 pandaJob.out
[2024-06-24 09:42:06] -rw------- 1 boinc boinc       424 Jun 24 05:42 setup.sh.local
[2024-06-24 09:42:06] -rw------- 1 boinc boinc   1024670 Jun 24 05:42 agis_schedconf.cvmfs.json
[2024-06-24 09:42:06] -rw------- 1 boinc boinc   1321363 Jun 24 05:42 cric_ddmendpoints.json
[2024-06-24 09:42:06] drwx------ 4 boinc boinc      4096 Jun 24 05:42 pilot3
[2024-06-24 09:42:06] -rw------- 1 boinc boinc 262716984 Jun 24 09:41 HITS.40024023._000402.pool.root.1
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc       531 Jun 24 09:41 boinc_task_state.xml
[2024-06-24 09:42:06] -rw------- 1 boinc boinc        95 Jun 24 09:41 pilot_heartbeat.json
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc      8192 Jun 24 09:41 boinc_mmap_file
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc        28 Jun 24 09:41 wrapper_checkpoint.txt
[2024-06-24 09:42:06] -rw------- 1 boinc boinc      1038 Jun 24 09:41 memory_monitor_summary.json
[2024-06-24 09:42:06] -rw------- 1 boinc boinc         0 Jun 24 09:41 agis_ddmendpoints.agis.ALL.json
[2024-06-24 09:42:06] -rw------- 1 boinc boinc    325694 Jun 24 09:41 log.40024023._000402.job.log.tgz.1
[2024-06-24 09:42:06] -rw------- 1 boinc boinc      7751 Jun 24 09:41 heartbeat.json
[2024-06-24 09:42:06] -rw------- 1 boinc boinc      4530 Jun 24 09:42 pilotlog.txt
[2024-06-24 09:42:06] -rw------- 1 boinc boinc   1462315 Jun 24 09:42 log.40024023._000402.job.log.1
[2024-06-24 09:42:06] -rw------- 1 boinc boinc       357 Jun 24 09:42 output.list
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc       620 Jun 24 09:42 runtime_log
[2024-06-24 09:42:06] -rw------- 1 boinc boinc   1812480 Jun 24 09:42 result.tar.gz
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc     11391 Jun 24 09:42 runtime_log.err
[2024-06-24 09:42:06] -rw------- 1 boinc boinc       657 Jun 24 09:42 B8QKDmhvTe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm6CXKDmd3SLQm.diag
[2024-06-24 09:42:06] -rw-r--r-- 1 boinc boinc     21403 Jun 24 09:42 stderr.txt
[2024-06-24 09:42:06] HITS file was successfully produced:
[2024-06-24 09:42:06] -rw------- 1 boinc boinc 262716984 Jun 24 09:41 shared/HITS.pool.root.1
[2024-06-24 09:42:06]  *** Contents of shared directory: ***
[2024-06-24 09:42:06] total 844076
[2024-06-24 09:42:06] -rw-r--r-- 2 boinc boinc 599286378 Jun 24 05:42 ATLAS.root_0
[2024-06-24 09:42:06] -rw-r--r-- 2 boinc boinc     17537 Jun 24 05:42 start_atlas.sh
[2024-06-24 09:42:06] -rw-r--r-- 2 boinc boinc    482485 Jun 24 05:42 input.tar.gz
[2024-06-24 09:42:06] -rw------- 1 boinc boinc 262716984 Jun 24 09:41 HITS.pool.root.1
[2024-06-24 09:42:06] -rw------- 1 boinc boinc   1812480 Jun 24 09:42 result.tar.gz
09:42:08 (1694809): run_atlas exited; CPU time 53870.396351
09:42:08 (1694809): called boinc_finish(0)

</stderr_txt>
]]>

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