Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:35 (3893373): wrapper (7.7.26015): starting
18:04:35 (3893373): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 18:04:35] Arguments: --nthreads 4
[2024-06-21 18:04:35] Threads: 4
[2024-06-21 18:04:35] Checking for CVMFS
[2024-06-21 18:04:35] No cvmfs_config command found, will try listing directly
[2024-06-21 18:04:35] CVMFS is ok
[2024-06-21 18:04:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 18:04:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 18:04:35] Further information can be found at the LHC@home message board.
[2024-06-21 18:04:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 18:04:35] Checking for apptainer binary...
[2024-06-21 18:04:35] which: no apptainer in ((null))
[2024-06-21 18:04:35] apptainer is not installed, using version from CVMFS
[2024-06-21 18:04:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 18:04:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-06-21 18:04:36] apptainer works
[2024-06-21 18:04:36] Set ATHENA_PROC_NUMBER=4
[2024-06-21 18:04:36] Set ATHENA_CORE_NUMBER=4
[2024-06-21 18:04:36] Starting ATLAS job with PandaID=6238833127
[2024-06-21 18:04:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 22:43:54]  *** The last 200 lines of the pilot log: ***
[2024-06-21 22:43:54] 2024-06-21 20:43:40,817 | INFO     | model: linear, x: [1718985921.0, 1718985982.0, 1718986043.0, 1718986104.0, 1718986165.0, 1718986226.0, 1718986287.0, 1718986348.0, 1718986409.0, 1718986470.0, 1718
[2024-06-21 22:43:54] 2024-06-21 20:43:40,817 | INFO     | sum of square deviations: 6035722470.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,819 | INFO     | sum of deviations: 135423361954.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,820 | INFO     | mean x: 1718994095.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,820 | INFO     | mean y: 2303342.096654275
[2024-06-21 22:43:54] 2024-06-21 20:43:40,820 | INFO     | -- intersect: -38566726410.52112
[2024-06-21 22:43:54] 2024-06-21 20:43:40,820 | INFO     | intersect: -38566726410.52112
[2024-06-21 22:43:54] 2024-06-21 20:43:40,820 | INFO     | chi2: 4.664264650720439
[2024-06-21 22:43:54] 2024-06-21 20:43:40,820 | INFO     | current chi2=4.664264650720439 (change=-0.018056294813428183 %)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,820 | INFO     | right removable region: 268
[2024-06-21 22:43:54] 2024-06-21 20:43:40,821 | INFO     | model: linear, x: [1718986226.0, 1718986287.0, 1718986348.0, 1718986409.0, 1718986470.0, 1718986531.0, 1718986592.0, 1718986653.0, 1718986714.0, 1718986775.0, 1718
[2024-06-21 22:43:54] 2024-06-21 20:43:40,821 | INFO     | sum of square deviations: 6035722470.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,823 | INFO     | sum of deviations: 70961176718.99998
[2024-06-21 22:43:54] 2024-06-21 20:43:40,823 | INFO     | mean x: 1718994400.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,824 | INFO     | mean y: 2334384.4795539035
[2024-06-21 22:43:54] 2024-06-21 20:43:40,824 | INFO     | -- intersect: -20207651413.189396
[2024-06-21 22:43:54] 2024-06-21 20:43:40,824 | INFO     | intersect: -20207651413.189396
[2024-06-21 22:43:54] 2024-06-21 20:43:40,824 | INFO     | chi2: 1.9472317125407517
[2024-06-21 22:43:54] 2024-06-21 20:43:40,824 | INFO     | current chi2=1.9472317125407517 (change=58.24457966512156 %)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,825 | INFO     | model: linear, x: [1718986531.0, 1718986592.0, 1718986653.0, 1718986714.0, 1718986775.0, 1718986836.0, 1718986897.0, 1718986958.0, 1718987019.0, 1718987080.0, 1718
[2024-06-21 22:43:54] 2024-06-21 20:43:40,825 | INFO     | sum of square deviations: 5705372090.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,827 | INFO     | sum of deviations: 17704001482.5
[2024-06-21 22:43:54] 2024-06-21 20:43:40,827 | INFO     | mean x: 1718994552.5
[2024-06-21 22:43:54] 2024-06-21 20:43:40,827 | INFO     | mean y: 2358971.632575758
[2024-06-21 22:43:54] 2024-06-21 20:43:40,827 | INFO     | -- intersect: -5331750991.013072
[2024-06-21 22:43:54] 2024-06-21 20:43:40,827 | INFO     | intersect: -5331750991.013072
[2024-06-21 22:43:54] 2024-06-21 20:43:40,828 | INFO     | chi2: 0.36822446775649204
[2024-06-21 22:43:54] 2024-06-21 20:43:40,828 | INFO     | current chi2=0.36822446775649204 (change=81.08984845588652 %)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,828 | INFO     | model: linear, x: [1718986836.0, 1718986897.0, 1718986958.0, 1718987019.0, 1718987080.0, 1718987141.0, 1718987202.0, 1718987263.0, 1718987324.0, 1718987385.0, 1718
[2024-06-21 22:43:54] 2024-06-21 20:43:40,828 | INFO     | sum of square deviations: 5387301010.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,830 | INFO     | sum of deviations: -418499588.9999991
[2024-06-21 22:43:54] 2024-06-21 20:43:40,831 | INFO     | mean x: 1718994705.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,831 | INFO     | mean y: 2367578.471042471
[2024-06-21 22:43:54] 2024-06-21 20:43:40,831 | INFO     | -- intersect: 135903569.16477108
[2024-06-21 22:43:54] 2024-06-21 20:43:40,831 | INFO     | intersect: 135903569.16477108
[2024-06-21 22:43:54] 2024-06-21 20:43:40,831 | INFO     | chi2: 0.0030883892341459687
[2024-06-21 22:43:54] 2024-06-21 20:43:40,831 | INFO     | current chi2=0.0030883892341459687 (change=99.16127538917692 %)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,832 | INFO     | model: linear, x: [1718987141.0, 1718987202.0, 1718987263.0, 1718987324.0, 1718987385.0, 1718987446.0, 1718987507.0, 1718987568.0, 1718987629.0, 1718987690.0, 1718
[2024-06-21 22:43:54] 2024-06-21 20:43:40,832 | INFO     | sum of square deviations: 5081276667.5
[2024-06-21 22:43:54] 2024-06-21 20:43:40,834 | INFO     | sum of deviations: -1326018427.0000002
[2024-06-21 22:43:54] 2024-06-21 20:43:40,834 | INFO     | mean x: 1718994857.5
[2024-06-21 22:43:54] 2024-06-21 20:43:40,834 | INFO     | mean y: 2368029.551181102
[2024-06-21 22:43:54] 2024-06-21 20:43:40,834 | INFO     | -- intersect: 450959792.23603386
[2024-06-21 22:43:54] 2024-06-21 20:43:40,834 | INFO     | intersect: 450959792.23603386
[2024-06-21 22:43:54] 2024-06-21 20:43:40,835 | INFO     | chi2: 0.002510784453648998
[2024-06-21 22:43:54] 2024-06-21 20:43:40,835 | INFO     | current chi2=0.002510784453648998 (change=18.702460626103548 %)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,835 | INFO     | left removable region: 40
[2024-06-21 22:43:54] 2024-06-21 20:43:40,835 | INFO     | model: linear, x: [1718988361.0, 1718988422.0, 1718988483.0, 1718988544.0, 1718988605.0, 1718988666.0, 1718988727.0, 1718988788.0, 1718988849.0, 1718988910.0, 1718
[2024-06-21 22:43:54] 2024-06-21 20:43:40,835 | INFO     | sum of square deviations: 3675146117.0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,837 | INFO     | sum of deviations: -626223163.5
[2024-06-21 22:43:54] 2024-06-21 20:43:40,840 | INFO     | mean x: 1718995284.5
[2024-06-21 22:43:54] 2024-06-21 20:43:40,840 | INFO     | mean y: 2367492.75
[2024-06-21 22:43:54] 2024-06-21 20:43:40,840 | INFO     | -- intersect: 295274123.0800867
[2024-06-21 22:43:54] 2024-06-21 20:43:40,840 | INFO     | intersect: 295274123.0800867
[2024-06-21 22:43:54] 2024-06-21 20:43:40,840 | INFO     | chi2: 0.0018765270053630382
[2024-06-21 22:43:54] 2024-06-21 20:43:40,840 | INFO     | -- intersect: 295274123.0800867
[2024-06-21 22:43:54] 2024-06-21 20:43:40,841 | INFO     | current memory leak: -0.17 B/s (using 228 data points, chi2=0.00)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,841 | INFO     | ..............................
[2024-06-21 22:43:54] 2024-06-21 20:43:40,841 | INFO     | . Timing measurements:
[2024-06-21 22:43:54] 2024-06-21 20:43:40,842 | INFO     | . get job = 0 s
[2024-06-21 22:43:54] 2024-06-21 20:43:40,842 | INFO     | . initial setup = 1 s
[2024-06-21 22:43:54] 2024-06-21 20:43:40,842 | INFO     | . payload setup = 10 s
[2024-06-21 22:43:54] 2024-06-21 20:43:40,842 | INFO     | . stage-in = 0 s
[2024-06-21 22:43:54] 2024-06-21 20:43:40,842 | INFO     | . payload execution = 16699 s
[2024-06-21 22:43:54] 2024-06-21 20:43:40,842 | INFO     | . stage-out = 0 s
[2024-06-21 22:43:54] 2024-06-21 20:43:40,842 | INFO     | . log creation = 0 s
[2024-06-21 22:43:54] 2024-06-21 20:43:40,842 | INFO     | ..............................
[2024-06-21 22:43:54] 2024-06-21 20:43:40,957 | WARNING  | process 3905166 is no longer using CPU - aborting
[2024-06-21 22:43:54] 2024-06-21 20:43:40,957 | INFO     | aborting job monitoring since job object (job id=6238833127) has expired
[2024-06-21 22:43:54] 2024-06-21 20:43:40,961 | INFO     | 
[2024-06-21 22:43:54] 2024-06-21 20:43:40,961 | INFO     | job summary report
[2024-06-21 22:43:54] 2024-06-21 20:43:40,961 | INFO     | --------------------------------------------------
[2024-06-21 22:43:54] 2024-06-21 20:43:40,961 | INFO     | PanDA job id: 6238833127
[2024-06-21 22:43:54] 2024-06-21 20:43:40,961 | INFO     | task id: 40024023
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | errors: (none)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | pilot state: finished 
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | transexitcode: 0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | exeerrorcode: 0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | exeerrordiag: 
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | exitcode: 0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | exitmsg: OK
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | cpuconsumptiontime: 63358 s
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | nevents: 400
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | neventsw: 0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | pid: 3905166
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | pgrp: 3905166
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | corecount: 4
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | event service: False
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | sizes: {0: 2386891, 4: 2387097, 11: 2387125, 16714: 2418731, 16716: 2427769, 16719: 2427883}
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | --------------------------------------------------
[2024-06-21 22:43:54] 2024-06-21 20:43:40,962 | INFO     | 
[2024-06-21 22:43:54] 2024-06-21 20:43:40,963 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-06-21 22:43:54] 2024-06-21 20:43:40,979 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,981 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,981 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 22:43:54] 2024-06-21 20:43:40,981 | INFO     | job 6238833127 has completed (purged errors)
[2024-06-21 22:43:54] 2024-06-21 20:43:40,981 | INFO     | overall cleanup function is called
[2024-06-21 22:43:54] 2024-06-21 20:43:41,987 | INFO     | --- collectZombieJob: --- 10, [3905166]
[2024-06-21 22:43:54] 2024-06-21 20:43:41,987 | INFO     | zombie collector waiting for pid 3905166
[2024-06-21 22:43:54] 2024-06-21 20:43:41,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 22:43:54] 2024-06-21 20:43:42,993 | INFO     | collected zombie processes
[2024-06-21 22:43:54] 2024-06-21 20:43:42,993 | INFO     | will now attempt to kill all subprocesses of pid=3905166
[2024-06-21 22:43:54] 2024-06-21 20:43:43,001 | INFO     | 16737s have passed since pilot start
[2024-06-21 22:43:54] 2024-06-21 20:43:43,144 | INFO     | process IDs to be killed: [3905166] (in reverse order)
[2024-06-21 22:43:54] 2024-06-21 20:43:43,237 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 22:43:54] 2024-06-21 20:43:43,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 22:43:54] 2024-06-21 20:43:43,244 | INFO     | did not find any defunct processes belonging to 3905166
[2024-06-21 22:43:54] 2024-06-21 20:43:43,249 | INFO     | did not find any defunct processes belonging to 3905166
[2024-06-21 22:43:54] 2024-06-21 20:43:43,250 | INFO     | ready for new job
[2024-06-21 22:43:54] 2024-06-21 20:43:43,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 22:43:54] 2024-06-21 20:43:43,251 | INFO     | *************************************
[2024-06-21 22:43:54] 2024-06-21 20:43:43,251 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 22:43:54] 2024-06-21 20:43:43,251 | INFO     | *************************************
[2024-06-21 22:43:54] 2024-06-21 20:43:43,252 | INFO     | 
[2024-06-21 22:43:54] 2024-06-21 20:43:43,254 | INFO     | architecture information:
[2024-06-21 22:43:54] 2024-06-21 20:43:43,254 | INFO     | executing command: cat /etc/os-release
[2024-06-21 22:43:54] 2024-06-21 20:43:43,270 | INFO     | cat /etc/os-release:
[2024-06-21 22:43:54] NAME="CentOS Linux"
[2024-06-21 22:43:54] VERSION="7 (Core)"
[2024-06-21 22:43:54] ID="centos"
[2024-06-21 22:43:54] ID_LIKE="rhel fedora"
[2024-06-21 22:43:54] VERSION_ID="7"
[2024-06-21 22:43:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 22:43:54] ANSI_COLOR="0;31"
[2024-06-21 22:43:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 22:43:54] HOME_URL="https://www.centos.org/"
[2024-06-21 22:43:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 22:43:54] 
[2024-06-21 22:43:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 22:43:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 22:43:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 22:43:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 22:43:54] 
[2024-06-21 22:43:54] 2024-06-21 20:43:43,270 | INFO     | *************************************
[2024-06-21 22:43:54] 2024-06-21 20:43:43,772 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-06-21 22:43:54] 2024-06-21 20:43:43,788 | INFO     | sufficient remaining disk space (664805572608 B)
[2024-06-21 22:43:54] 2024-06-21 20:43:43,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 22:43:54] 2024-06-21 20:43:43,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 22:43:54] 2024-06-21 20:43:43,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 22:43:54] 2024-06-21 20:43:43,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 22:43:54] 2024-06-21 20:43:44,006 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 22:43:54] 2024-06-21 20:43:44,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 22:43:54] 2024-06-21 20:43:44,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 22:43:54] 2024-06-21 20:43:44,223 | INFO     | all data control threads have been joined
[2024-06-21 22:43:54] 2024-06-21 20:43:44,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 22:43:54] 2024-06-21 20:43:44,464 | INFO     | aborting loop
[2024-06-21 22:43:54] 2024-06-21 20:43:44,634 | INFO     | all payload control threads have been joined
[2024-06-21 22:43:54] 2024-06-21 20:43:44,794 | INFO     | [job] retrieve thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:44,923 | INFO     | [payload] validate_post thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:44,965 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,047 | INFO     | [payload] failed_post thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,119 | INFO     | [data] copytool_in thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,228 | INFO     | [data] control thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,256 | INFO     | all job control threads have been joined
[2024-06-21 22:43:54] 2024-06-21 20:43:45,376 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,469 | INFO     | [job] job monitor thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,615 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,640 | INFO     | [payload] control thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,794 | INFO     | [data] copytool_out thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:45,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 22:43:54] 2024-06-21 20:43:46,056 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:46,064 | INFO     | [job] validate thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:46,261 | INFO     | [job] control thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:46,917 | INFO     | [job] queue monitor thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:47,795 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 22:43:54] 2024-06-21 20:43:48,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47125923984448)>', '<ExcThread(monitor, started 47126112663296)>']
[2024-06-21 22:43:54] 2024-06-21 20:43:49,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 22:43:54] 2024-06-21 20:43:49,031 | INFO     | [monitor] control thread has ended
[2024-06-21 22:43:54] 2024-06-21 20:43:53,367 | INFO     | all workflow threads have been joined
[2024-06-21 22:43:54] 2024-06-21 20:43:53,367 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 22:43:54] 2024-06-21 20:43:53,368 | INFO     | traces error code: 0
[2024-06-21 22:43:54] 2024-06-21 20:43:53,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 22:43:54] 2024-06-21 20:43:53,469 [wrapper] ==== pilot stdout END ====
[2024-06-21 22:43:54] 2024-06-21 20:43:53,471 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 22:43:54] 2024-06-21 20:43:53,473 [wrapper] pilotpid: 3897767
[2024-06-21 22:43:54] 2024-06-21 20:43:53,475 [wrapper] Pilot exit status: 0
[2024-06-21 22:43:54] 2024-06-21 20:43:53,482 [wrapper] pandaids: 6238833127
[2024-06-21 22:43:54] 2024-06-21 20:43:53,556 [wrapper] cleanup supervisor_pilot  386179 3897768
[2024-06-21 22:43:54] 2024-06-21 20:43:53,558 [wrapper] Test setup, not cleaning
[2024-06-21 22:43:54] 2024-06-21 20:43:53,561 [wrapper] ==== wrapper stdout END ====
[2024-06-21 22:43:54] 2024-06-21 20:43:53,563 [wrapper] ==== wrapper stderr END ====
[2024-06-21 22:43:54] 2024-06-21 20:43:53,569 [wrapper] apfmon messages muted
[2024-06-21 22:43:54]  *** Error codes and diagnostics ***
[2024-06-21 22:43:54]     "exeErrorCode": 0,
[2024-06-21 22:43:54]     "exeErrorDiag": "",
[2024-06-21 22:43:54]     "pilotErrorCode": 0,
[2024-06-21 22:43:54]     "pilotErrorDiag": "",
[2024-06-21 22:43:54]  *** Listing of results directory ***
[2024-06-21 22:43:54] total 837076
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:38 pilot3.tar.gz
[2024-06-21 22:43:54] -rwx------ 1 boinc boinc     32308 Jun 20 11:56 runpilot2-wrapper.sh
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:56 queuedata.json
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc       100 Jun 21 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 22:43:54] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 18:04 run_atlas
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc       105 Jun 21 18:04 job.xml
[2024-06-21 22:43:54] -rw-r--r-- 2 boinc boinc 594753716 Jun 21 18:04 EVNT.40024021._000038.pool.root.1
[2024-06-21 22:43:54] -rw-r--r-- 2 boinc boinc     17537 Jun 21 18:04 start_atlas.sh
[2024-06-21 22:43:54] drwxrwx--x 2 boinc boinc      4096 Jun 21 18:04 shared
[2024-06-21 22:43:54] -rw-r--r-- 2 boinc boinc    482483 Jun 21 18:04 input.tar.gz
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc      6661 Jun 21 18:04 init_data.xml
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc         0 Jun 21 18:04 boinc_lockfile
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc      2515 Jun 21 18:04 pandaJob.out
[2024-06-21 22:43:54] -rw------- 1 boinc boinc       424 Jun 21 18:04 setup.sh.local
[2024-06-21 22:43:54] -rw------- 1 boinc boinc   1023047 Jun 21 18:04 agis_schedconf.cvmfs.json
[2024-06-21 22:43:54] -rw------- 1 boinc boinc   1321307 Jun 21 18:04 cric_ddmendpoints.json
[2024-06-21 22:43:54] drwx------ 4 boinc boinc      4096 Jun 21 18:04 pilot3
[2024-06-21 22:43:54] -rw------- 1 boinc boinc 254700715 Jun 21 22:43 HITS.40024023._000356.pool.root.1
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc       532 Jun 21 22:43 boinc_task_state.xml
[2024-06-21 22:43:54] -rw------- 1 boinc boinc      1045 Jun 21 22:43 memory_monitor_summary.json
[2024-06-21 22:43:54] -rw------- 1 boinc boinc         0 Jun 21 22:43 agis_ddmendpoints.agis.ALL.json
[2024-06-21 22:43:54] -rw------- 1 boinc boinc    360004 Jun 21 22:43 log.40024023._000356.job.log.tgz.1
[2024-06-21 22:43:54] -rw------- 1 boinc boinc      7752 Jun 21 22:43 heartbeat.json
[2024-06-21 22:43:54] -rw------- 1 boinc boinc        95 Jun 21 22:43 pilot_heartbeat.json
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc        28 Jun 21 22:43 wrapper_checkpoint.txt
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc      8192 Jun 21 22:43 boinc_mmap_file
[2024-06-21 22:43:54] -rw------- 1 boinc boinc      4221 Jun 21 22:43 pilotlog.txt
[2024-06-21 22:43:54] -rw------- 1 boinc boinc   1729394 Jun 21 22:43 log.40024023._000356.job.log.1
[2024-06-21 22:43:54] -rw------- 1 boinc boinc       357 Jun 21 22:43 output.list
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc       620 Jun 21 22:43 runtime_log
[2024-06-21 22:43:54] -rw------- 1 boinc boinc   2109440 Jun 21 22:43 result.tar.gz
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc     11410 Jun 21 22:43 runtime_log.err
[2024-06-21 22:43:54] -rw------- 1 boinc boinc       658 Jun 21 22:43 YdqMDmehTe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmN4kKDmzcZ28m.diag
[2024-06-21 22:43:54] -rw-r--r-- 1 boinc boinc     21336 Jun 21 22:43 stderr.txt
[2024-06-21 22:43:54] HITS file was successfully produced:
[2024-06-21 22:43:54] -rw------- 1 boinc boinc 254700715 Jun 21 22:43 shared/HITS.pool.root.1
[2024-06-21 22:43:54]  *** Contents of shared directory: ***
[2024-06-21 22:43:54] total 832108
[2024-06-21 22:43:54] -rw-r--r-- 2 boinc boinc 594753716 Jun 21 18:04 ATLAS.root_0
[2024-06-21 22:43:54] -rw-r--r-- 2 boinc boinc     17537 Jun 21 18:04 start_atlas.sh
[2024-06-21 22:43:54] -rw-r--r-- 2 boinc boinc    482483 Jun 21 18:04 input.tar.gz
[2024-06-21 22:43:54] -rw------- 1 boinc boinc 254700715 Jun 21 22:43 HITS.pool.root.1
[2024-06-21 22:43:54] -rw------- 1 boinc boinc   2109440 Jun 21 22:43 result.tar.gz
22:43:56 (3893373): run_atlas exited; CPU time 63066.845920
22:43:56 (3893373): called boinc_finish(0)

</stderr_txt>
]]>

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