Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:25:46 (3451066): wrapper (7.7.26015): starting
02:25:46 (3451066): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 02:25:46] Arguments: --nthreads 4
[2024-06-22 02:25:46] Threads: 4
[2024-06-22 02:25:46] Checking for CVMFS
[2024-06-22 02:25:46] No cvmfs_config command found, will try listing directly
[2024-06-22 02:25:46] CVMFS is ok
[2024-06-22 02:25:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 02:25:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 02:25:46] Further information can be found at the LHC@home message board.
[2024-06-22 02:25:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 02:25:46] Checking for apptainer binary...
[2024-06-22 02:25:46] which: no apptainer in ((null))
[2024-06-22 02:25:46] apptainer is not installed, using version from CVMFS
[2024-06-22 02:25:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 02:25:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-22 02:25:47] apptainer works
[2024-06-22 02:25:47] Set ATHENA_PROC_NUMBER=4
[2024-06-22 02:25:47] Set ATHENA_CORE_NUMBER=4
[2024-06-22 02:25:47] Starting ATLAS job with PandaID=6238833084
[2024-06-22 02:25:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 07:52:41]  *** The last 200 lines of the pilot log: ***
[2024-06-22 07:52:41] 2024-06-22 05:52:25,888 | WARNING  | GPU info not found in prmon json
[2024-06-22 07:52:41] 2024-06-22 05:52:25,889 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 07:52:41] 2024-06-22 05:52:25,889 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 07:52:41] 2024-06-22 05:52:25,894 | INFO     | fitting pss+swap vs Time
[2024-06-22 07:52:41] 2024-06-22 05:52:25,894 | INFO     | model: linear, x: [1719015986.0, 1719016047.0, 1719016108.0, 1719016169.0, 1719016230.0, 1719016291.0, 1719016352.0, 1719016413.0, 1719016474.0, 1719016535.0, 1719
[2024-06-22 07:52:41] 2024-06-22 05:52:25,894 | INFO     | sum of square deviations: 10256266720.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,896 | INFO     | sum of deviations: 45769316565.00003
[2024-06-22 07:52:41] 2024-06-22 05:52:25,896 | INFO     | mean x: 1719025746.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,896 | INFO     | mean y: 2355896.8411214952
[2024-06-22 07:52:41] 2024-06-22 05:52:25,896 | INFO     | -- intersect: -7668918232.431849
[2024-06-22 07:52:41] 2024-06-22 05:52:25,896 | INFO     | intersect: -7668918232.431849
[2024-06-22 07:52:41] 2024-06-22 05:52:25,897 | INFO     | chi2: 4.455782280435054
[2024-06-22 07:52:41] 2024-06-22 05:52:25,897 | INFO     | model: linear, x: [1719015986.0, 1719016047.0, 1719016108.0, 1719016169.0, 1719016230.0, 1719016291.0, 1719016352.0, 1719016413.0, 1719016474.0, 1719016535.0, 1719
[2024-06-22 07:52:41] 2024-06-22 05:52:25,897 | INFO     | sum of square deviations: 9784425315.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,899 | INFO     | sum of deviations: 65062526830.50002
[2024-06-22 07:52:41] 2024-06-22 05:52:25,899 | INFO     | mean x: 1719025593.5
[2024-06-22 07:52:41] 2024-06-22 05:52:25,899 | INFO     | mean y: 2362050.6867088606
[2024-06-22 07:52:41] 2024-06-22 05:52:25,899 | INFO     | -- intersect: -11428472689.085638
[2024-06-22 07:52:41] 2024-06-22 05:52:25,899 | INFO     | intersect: -11428472689.085638
[2024-06-22 07:52:41] 2024-06-22 05:52:25,899 | INFO     | chi2: 3.718106259508964
[2024-06-22 07:52:41] 2024-06-22 05:52:25,899 | INFO     | current chi2=3.718106259508964 (change=16.555477231577502 %)
[2024-06-22 07:52:41] 2024-06-22 05:52:25,899 | INFO     | right removable region: 315
[2024-06-22 07:52:41] 2024-06-22 05:52:25,900 | INFO     | model: linear, x: [1719016291.0, 1719016352.0, 1719016413.0, 1719016474.0, 1719016535.0, 1719016596.0, 1719016657.0, 1719016718.0, 1719016779.0, 1719016840.0, 1719
[2024-06-22 07:52:41] 2024-06-22 05:52:25,900 | INFO     | sum of square deviations: 9784425315.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,901 | INFO     | sum of deviations: -25404990219.500008
[2024-06-22 07:52:41] 2024-06-22 05:52:25,901 | INFO     | mean x: 1719025898.5
[2024-06-22 07:52:41] 2024-06-22 05:52:25,901 | INFO     | mean y: 2378846.0981012657
[2024-06-22 07:52:41] 2024-06-22 05:52:25,901 | INFO     | -- intersect: 4465782135.763838
[2024-06-22 07:52:41] 2024-06-22 05:52:25,901 | INFO     | intersect: 4465782135.763838
[2024-06-22 07:52:41] 2024-06-22 05:52:25,902 | INFO     | chi2: 2.2019623975199254
[2024-06-22 07:52:41] 2024-06-22 05:52:25,902 | INFO     | current chi2=2.2019623975199254 (change=50.58191224493738 %)
[2024-06-22 07:52:41] 2024-06-22 05:52:25,902 | INFO     | model: linear, x: [1719016596.0, 1719016657.0, 1719016718.0, 1719016779.0, 1719016840.0, 1719016901.0, 1719016962.0, 1719017023.0, 1719017084.0, 1719017145.0, 1719
[2024-06-22 07:52:41] 2024-06-22 05:52:25,902 | INFO     | sum of square deviations: 9327281860.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,904 | INFO     | sum of deviations: -77992146458.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,904 | INFO     | mean x: 1719026051.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,904 | INFO     | mean y: 2396388.797427653
[2024-06-22 07:52:41] 2024-06-22 05:52:25,904 | INFO     | -- intersect: 14376415909.926104
[2024-06-22 07:52:41] 2024-06-22 05:52:25,904 | INFO     | intersect: 14376415909.926104
[2024-06-22 07:52:41] 2024-06-22 05:52:25,904 | INFO     | chi2: 1.06358318922161
[2024-06-22 07:52:41] 2024-06-22 05:52:25,904 | INFO     | current chi2=1.06358318922161 (change=51.698394558439055 %)
[2024-06-22 07:52:41] 2024-06-22 05:52:25,905 | INFO     | model: linear, x: [1719016901.0, 1719016962.0, 1719017023.0, 1719017084.0, 1719017145.0, 1719017206.0, 1719017267.0, 1719017328.0, 1719017389.0, 1719017450.0, 1719
[2024-06-22 07:52:41] 2024-06-22 05:52:25,905 | INFO     | sum of square deviations: 8884603792.5
[2024-06-22 07:52:41] 2024-06-22 05:52:25,906 | INFO     | sum of deviations: -80941982841.5
[2024-06-22 07:52:41] 2024-06-22 05:52:25,906 | INFO     | mean x: 1719026203.5
[2024-06-22 07:52:41] 2024-06-22 05:52:25,906 | INFO     | mean y: 2397376.088235294
[2024-06-22 07:52:41] 2024-06-22 05:52:25,906 | INFO     | -- intersect: 15663353420.660877
[2024-06-22 07:52:41] 2024-06-22 05:52:25,906 | INFO     | intersect: 15663353420.660877
[2024-06-22 07:52:41] 2024-06-22 05:52:25,907 | INFO     | chi2: 1.0146935835132875
[2024-06-22 07:52:41] 2024-06-22 05:52:25,907 | INFO     | current chi2=1.0146935835132875 (change=4.596688458765763 %)
[2024-06-22 07:52:41] 2024-06-22 05:52:25,907 | INFO     | left removable region: 30
[2024-06-22 07:52:41] 2024-06-22 05:52:25,907 | INFO     | model: linear, x: [1719017816.0, 1719017877.0, 1719017938.0, 1719017999.0, 1719018060.0, 1719018121.0, 1719018182.0, 1719018243.0, 1719018304.0, 1719018365.0, 1719
[2024-06-22 07:52:41] 2024-06-22 05:52:25,907 | INFO     | sum of square deviations: 7178069470.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,909 | INFO     | sum of deviations: -30173660004.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,909 | INFO     | mean x: 1719026478.0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,909 | INFO     | mean y: 2392968.950877193
[2024-06-22 07:52:41] 2024-06-22 05:52:25,909 | INFO     | -- intersect: 7228475232.688787
[2024-06-22 07:52:41] 2024-06-22 05:52:25,909 | INFO     | intersect: 7228475232.688787
[2024-06-22 07:52:41] 2024-06-22 05:52:25,909 | INFO     | chi2: 0.16967219698319652
[2024-06-22 07:52:41] 2024-06-22 05:52:25,909 | INFO     | -- intersect: 7228475232.688787
[2024-06-22 07:52:41] 2024-06-22 05:52:25,909 | INFO     | current memory leak: -4.20 B/s (using 285 data points, chi2=0.17)
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | ..............................
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | . Timing measurements:
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | . get job = 0 s
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | . initial setup = 1 s
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | . payload setup = 6 s
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | . stage-in = 0 s
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | . payload execution = 19553 s
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | . stage-out = 1 s
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | . log creation = 0 s
[2024-06-22 07:52:41] 2024-06-22 05:52:25,910 | INFO     | ..............................
[2024-06-22 07:52:41] 2024-06-22 05:52:25,967 | INFO     | 
[2024-06-22 07:52:41] 2024-06-22 05:52:25,967 | INFO     | job summary report
[2024-06-22 07:52:41] 2024-06-22 05:52:25,967 | INFO     | --------------------------------------------------
[2024-06-22 07:52:41] 2024-06-22 05:52:25,967 | INFO     | PanDA job id: 6238833084
[2024-06-22 07:52:41] 2024-06-22 05:52:25,967 | INFO     | task id: 40024023
[2024-06-22 07:52:41] 2024-06-22 05:52:25,967 | INFO     | errors: (none)
[2024-06-22 07:52:41] 2024-06-22 05:52:25,968 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 07:52:41] 2024-06-22 05:52:25,968 | INFO     | pilot state: finished 
[2024-06-22 07:52:41] 2024-06-22 05:52:25,968 | INFO     | transexitcode: 0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,968 | INFO     | exeerrorcode: 0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,968 | INFO     | exeerrordiag: 
[2024-06-22 07:52:41] 2024-06-22 05:52:25,968 | INFO     | exitcode: 0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,968 | INFO     | exitmsg: OK
[2024-06-22 07:52:41] 2024-06-22 05:52:25,969 | INFO     | cpuconsumptiontime: 74802 s
[2024-06-22 07:52:41] 2024-06-22 05:52:25,969 | INFO     | nevents: 400
[2024-06-22 07:52:41] 2024-06-22 05:52:25,969 | INFO     | neventsw: 0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,969 | INFO     | pid: 3462700
[2024-06-22 07:52:41] 2024-06-22 05:52:25,969 | INFO     | pgrp: 3462700
[2024-06-22 07:52:41] 2024-06-22 05:52:25,969 | INFO     | corecount: 4
[2024-06-22 07:52:41] 2024-06-22 05:52:25,969 | INFO     | event service: False
[2024-06-22 07:52:41] 2024-06-22 05:52:25,969 | INFO     | sizes: {0: 2385350, 1: 2386897, 6: 2387103, 12: 2387131, 19564: 2420179, 19565: 2429345, 19572: 2429459}
[2024-06-22 07:52:41] 2024-06-22 05:52:25,970 | INFO     | --------------------------------------------------
[2024-06-22 07:52:41] 2024-06-22 05:52:25,970 | INFO     | 
[2024-06-22 07:52:41] 2024-06-22 05:52:25,970 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2024-06-22 07:52:41] 2024-06-22 05:52:25,990 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,990 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,990 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,991 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,993 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 07:52:41] 2024-06-22 05:52:25,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,993 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 07:52:41] 2024-06-22 05:52:25,993 | INFO     | job 6238833084 has completed (purged errors)
[2024-06-22 07:52:41] 2024-06-22 05:52:25,993 | INFO     | overall cleanup function is called
[2024-06-22 07:52:41] 2024-06-22 05:52:27,001 | INFO     | --- collectZombieJob: --- 10, [3462700]
[2024-06-22 07:52:41] 2024-06-22 05:52:27,001 | INFO     | zombie collector waiting for pid 3462700
[2024-06-22 07:52:41] 2024-06-22 05:52:27,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 07:52:41] 2024-06-22 05:52:28,006 | INFO     | collected zombie processes
[2024-06-22 07:52:41] 2024-06-22 05:52:28,006 | INFO     | will now attempt to kill all subprocesses of pid=3462700
[2024-06-22 07:52:41] 2024-06-22 05:52:28,136 | INFO     | process IDs to be killed: [3462700] (in reverse order)
[2024-06-22 07:52:41] 2024-06-22 05:52:28,217 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 07:52:41] 2024-06-22 05:52:28,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 07:52:41] 2024-06-22 05:52:28,222 | INFO     | did not find any defunct processes belonging to 3462700
[2024-06-22 07:52:41] 2024-06-22 05:52:28,225 | INFO     | did not find any defunct processes belonging to 3462700
[2024-06-22 07:52:41] 2024-06-22 05:52:28,225 | INFO     | ready for new job
[2024-06-22 07:52:41] 2024-06-22 05:52:28,225 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 07:52:41] 2024-06-22 05:52:28,227 | INFO     | *************************************
[2024-06-22 07:52:41] 2024-06-22 05:52:28,227 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 07:52:41] 2024-06-22 05:52:28,227 | INFO     | *************************************
[2024-06-22 07:52:41] 2024-06-22 05:52:28,227 | INFO     | 
[2024-06-22 07:52:41] 2024-06-22 05:52:28,228 | INFO     | architecture information:
[2024-06-22 07:52:41] 2024-06-22 05:52:28,228 | INFO     | executing command: cat /etc/os-release
[2024-06-22 07:52:41] 2024-06-22 05:52:28,239 | INFO     | cat /etc/os-release:
[2024-06-22 07:52:41] NAME="CentOS Linux"
[2024-06-22 07:52:41] VERSION="7 (Core)"
[2024-06-22 07:52:41] ID="centos"
[2024-06-22 07:52:41] ID_LIKE="rhel fedora"
[2024-06-22 07:52:41] VERSION_ID="7"
[2024-06-22 07:52:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 07:52:41] ANSI_COLOR="0;31"
[2024-06-22 07:52:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 07:52:41] HOME_URL="https://www.centos.org/"
[2024-06-22 07:52:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 07:52:41] 
[2024-06-22 07:52:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 07:52:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 07:52:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 07:52:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 07:52:41] 
[2024-06-22 07:52:41] 2024-06-22 05:52:28,239 | INFO     | *************************************
[2024-06-22 07:52:41] 2024-06-22 05:52:28,741 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2024-06-22 07:52:41] 2024-06-22 05:52:28,758 | INFO     | sufficient remaining disk space (1663004835840 B)
[2024-06-22 07:52:41] 2024-06-22 05:52:28,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 07:52:41] 2024-06-22 05:52:28,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 07:52:41] 2024-06-22 05:52:29,287 | INFO     | all data control threads have been joined
[2024-06-22 07:52:41] 2024-06-22 05:52:29,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 07:52:41] 2024-06-22 05:52:29,436 | INFO     | aborting loop
[2024-06-22 07:52:41] 2024-06-22 05:52:29,549 | INFO     | all payload control threads have been joined
[2024-06-22 07:52:41] 2024-06-22 05:52:29,583 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 07:52:41] 2024-06-22 05:52:29,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 07:52:41] 2024-06-22 05:52:29,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 07:52:41] 2024-06-22 05:52:29,656 | INFO     | all job control threads have been joined
[2024-06-22 07:52:41] 2024-06-22 05:52:29,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 07:52:41] 2024-06-22 05:52:29,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 07:52:41] 2024-06-22 05:52:29,763 | INFO     | [job] retrieve thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:29,766 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:29,850 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,096 | INFO     | [payload] validate_post thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,236 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,291 | INFO     | [data] control thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,296 | INFO     | [payload] failed_post thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,305 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,441 | INFO     | [job] job monitor thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,554 | INFO     | [payload] control thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,562 | INFO     | [data] copytool_in thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,661 | INFO     | [job] control thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:30,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 07:52:41] 2024-06-22 05:52:31,141 | INFO     | [job] validate thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:31,667 | INFO     | [data] copytool_out thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:31,982 | INFO     | [job] queue monitor thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:33,747 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 07:52:41] 2024-06-22 05:52:35,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47368484529216)>', '<ExcThread(monitor, started 47368871368448)>']
[2024-06-22 07:52:41] 2024-06-22 05:52:36,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 07:52:41] 2024-06-22 05:52:36,618 | INFO     | [monitor] control thread has ended
[2024-06-22 07:52:41] 2024-06-22 05:52:40,731 | INFO     | all workflow threads have been joined
[2024-06-22 07:52:41] 2024-06-22 05:52:40,732 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 07:52:41] 2024-06-22 05:52:40,732 | INFO     | traces error code: 0
[2024-06-22 07:52:41] 2024-06-22 05:52:40,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 07:52:41] 2024-06-22 05:52:40,808 [wrapper] ==== pilot stdout END ====
[2024-06-22 07:52:41] 2024-06-22 05:52:40,812 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 07:52:41] 2024-06-22 05:52:40,814 [wrapper] pilotpid: 3455340
[2024-06-22 07:52:41] 2024-06-22 05:52:40,816 [wrapper] Pilot exit status: 0
[2024-06-22 07:52:41] 2024-06-22 05:52:40,823 [wrapper] pandaids: 6238833084
[2024-06-22 07:52:41] 2024-06-22 05:52:40,873 [wrapper] cleanup supervisor_pilot 3958052 3455341
[2024-06-22 07:52:41] 2024-06-22 05:52:40,875 [wrapper] Test setup, not cleaning
[2024-06-22 07:52:41] 2024-06-22 05:52:40,877 [wrapper] ==== wrapper stdout END ====
[2024-06-22 07:52:41] 2024-06-22 05:52:40,879 [wrapper] ==== wrapper stderr END ====
[2024-06-22 07:52:41] 2024-06-22 05:52:40,883 [wrapper] apfmon messages muted
[2024-06-22 07:52:41]  *** Error codes and diagnostics ***
[2024-06-22 07:52:41]     "exeErrorCode": 0,
[2024-06-22 07:52:41]     "exeErrorDiag": "",
[2024-06-22 07:52:41]     "pilotErrorCode": 0,
[2024-06-22 07:52:41]     "pilotErrorDiag": "",
[2024-06-22 07:52:41]  *** Listing of results directory ***
[2024-06-22 07:52:41] total 845488
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:38 pilot3.tar.gz
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:44 queuedata.json
[2024-06-22 07:52:41] -rwx------ 1 boinc boinc     32308 Jun 20 11:44 runpilot2-wrapper.sh
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc       100 Jun 22 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 07:52:41] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 02:25 run_atlas
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc       105 Jun 22 02:25 job.xml
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc      6455 Jun 22 02:25 init_data.xml
[2024-06-22 07:52:41] -rw-r--r-- 2 boinc boinc 595025143 Jun 22 02:25 EVNT.40024021._000036.pool.root.1
[2024-06-22 07:52:41] -rw-r--r-- 2 boinc boinc     17537 Jun 22 02:25 start_atlas.sh
[2024-06-22 07:52:41] drwxrwx--x 2 boinc boinc      4096 Jun 22 02:25 shared
[2024-06-22 07:52:41] -rw-r--r-- 2 boinc boinc    482489 Jun 22 02:25 input.tar.gz
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc         0 Jun 22 02:25 boinc_lockfile
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc      2523 Jun 22 02:25 pandaJob.out
[2024-06-22 07:52:41] -rw------- 1 boinc boinc       424 Jun 22 02:25 setup.sh.local
[2024-06-22 07:52:41] -rw------- 1 boinc boinc   1025937 Jun 22 02:25 agis_schedconf.cvmfs.json
[2024-06-22 07:52:41] -rw------- 1 boinc boinc   1321363 Jun 22 02:25 cric_ddmendpoints.json
[2024-06-22 07:52:41] drwx------ 4 boinc boinc      4096 Jun 22 02:25 pilot3
[2024-06-22 07:52:41] -rw------- 1 boinc boinc 262420642 Jun 22 07:51 HITS.40024023._000314.pool.root.1
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc       532 Jun 22 07:51 boinc_task_state.xml
[2024-06-22 07:52:41] -rw------- 1 boinc boinc        95 Jun 22 07:52 pilot_heartbeat.json
[2024-06-22 07:52:41] -rw------- 1 boinc boinc      1047 Jun 22 07:52 memory_monitor_summary.json
[2024-06-22 07:52:41] -rw------- 1 boinc boinc         0 Jun 22 07:52 agis_ddmendpoints.agis.ALL.json
[2024-06-22 07:52:41] -rw------- 1 boinc boinc    393999 Jun 22 07:52 log.40024023._000314.job.log.tgz.1
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc      8192 Jun 22 07:52 boinc_mmap_file
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc        28 Jun 22 07:52 wrapper_checkpoint.txt
[2024-06-22 07:52:41] -rw------- 1 boinc boinc      7758 Jun 22 07:52 heartbeat.json
[2024-06-22 07:52:41] -rw------- 1 boinc boinc      4222 Jun 22 07:52 pilotlog.txt
[2024-06-22 07:52:41] -rw------- 1 boinc boinc   2004255 Jun 22 07:52 log.40024023._000314.job.log.1
[2024-06-22 07:52:41] -rw------- 1 boinc boinc       357 Jun 22 07:52 output.list
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc       620 Jun 22 07:52 runtime_log
[2024-06-22 07:52:41] -rw------- 1 boinc boinc   2416640 Jun 22 07:52 result.tar.gz
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc     11410 Jun 22 07:52 runtime_log.err
[2024-06-22 07:52:41] -rw------- 1 boinc boinc       659 Jun 22 07:52 kUfNDmfWTe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmq3kKDmBjHV9n.diag
[2024-06-22 07:52:41] -rw-r--r-- 1 boinc boinc     21257 Jun 22 07:52 stderr.txt
[2024-06-22 07:52:41] HITS file was successfully produced:
[2024-06-22 07:52:41] -rw------- 1 boinc boinc 262420642 Jun 22 07:51 shared/HITS.pool.root.1
[2024-06-22 07:52:41]  *** Contents of shared directory: ***
[2024-06-22 07:52:41] total 840212
[2024-06-22 07:52:41] -rw-r--r-- 2 boinc boinc 595025143 Jun 22 02:25 ATLAS.root_0
[2024-06-22 07:52:41] -rw-r--r-- 2 boinc boinc     17537 Jun 22 02:25 start_atlas.sh
[2024-06-22 07:52:41] -rw-r--r-- 2 boinc boinc    482489 Jun 22 02:25 input.tar.gz
[2024-06-22 07:52:41] -rw------- 1 boinc boinc 262420642 Jun 22 07:51 HITS.pool.root.1
[2024-06-22 07:52:41] -rw------- 1 boinc boinc   2416640 Jun 22 07:52 result.tar.gz
07:52:43 (3451066): run_atlas exited; CPU time 74593.885811
07:52:43 (3451066): called boinc_finish(0)

</stderr_txt>
]]>

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