Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:05:48 (1949524): wrapper (7.7.26015): starting
11:05:48 (1949524): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 11:05:48] Arguments: --nthreads 4
[2024-06-21 11:05:48] Threads: 4
[2024-06-21 11:05:48] Checking for CVMFS
[2024-06-21 11:05:48] No cvmfs_config command found, will try listing directly
[2024-06-21 11:05:48] CVMFS is ok
[2024-06-21 11:05:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 11:05:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 11:05:49] Further information can be found at the LHC@home message board.
[2024-06-21 11:05:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 11:05:49] Checking for apptainer binary...
[2024-06-21 11:05:49] which: no apptainer in ((null))
[2024-06-21 11:05:49] apptainer is not installed, using version from CVMFS
[2024-06-21 11:05:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 11:05:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2024-06-21 11:05:49] apptainer works
[2024-06-21 11:05:49] Set ATHENA_PROC_NUMBER=4
[2024-06-21 11:05:49] Set ATHENA_CORE_NUMBER=4
[2024-06-21 11:05:49] Starting ATLAS job with PandaID=6238833018
[2024-06-21 11:05:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 16:54:39]  *** The last 200 lines of the pilot log: ***
[2024-06-21 16:54:39] 2024-06-21 14:54:18,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 16:54:39] 2024-06-21 14:54:18,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 16:54:39] 2024-06-21 14:54:18,057 | INFO     | fitting pss+swap vs Time
[2024-06-21 16:54:39] 2024-06-21 14:54:18,057 | INFO     | model: linear, x: [1718960785.0, 1718960846.0, 1718960907.0, 1718960968.0, 1718961029.0, 1718961090.0, 1718961151.0, 1718961212.0, 1718961273.0, 1718961334.0, 1718
[2024-06-21 16:54:39] 2024-06-21 14:54:18,057 | INFO     | sum of square deviations: 12512874612.0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,061 | INFO     | sum of deviations: 165000792891.00006
[2024-06-21 16:54:39] 2024-06-21 14:54:18,061 | INFO     | mean x: 1718971216.0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,061 | INFO     | mean y: 2318651.0699708457
[2024-06-21 16:54:39] 2024-06-21 14:54:18,061 | INFO     | -- intersect: -22664863942.19284
[2024-06-21 16:54:39] 2024-06-21 14:54:18,061 | INFO     | intersect: -22664863942.19284
[2024-06-21 16:54:39] 2024-06-21 14:54:18,062 | INFO     | chi2: 5.024779457972239
[2024-06-21 16:54:39] 2024-06-21 14:54:18,062 | INFO     | model: linear, x: [1718960785.0, 1718960846.0, 1718960907.0, 1718960968.0, 1718961029.0, 1718961090.0, 1718961151.0, 1718961212.0, 1718961273.0, 1718961334.0, 1718
[2024-06-21 16:54:39] 2024-06-21 14:54:18,063 | INFO     | sum of square deviations: 11973599384.5
[2024-06-21 16:54:39] 2024-06-21 14:54:18,066 | INFO     | sum of deviations: 184333925612.99994
[2024-06-21 16:54:39] 2024-06-21 14:54:18,066 | INFO     | mean x: 1718971063.5
[2024-06-21 16:54:39] 2024-06-21 14:54:18,066 | INFO     | mean y: 2324044.3846153845
[2024-06-21 16:54:39] 2024-06-21 14:54:18,066 | INFO     | -- intersect: -26461287604.44793
[2024-06-21 16:54:39] 2024-06-21 14:54:18,066 | INFO     | intersect: -26461287604.44793
[2024-06-21 16:54:39] 2024-06-21 14:54:18,067 | INFO     | chi2: 4.230478952190777
[2024-06-21 16:54:39] 2024-06-21 14:54:18,067 | INFO     | current chi2=4.230478952190777 (change=15.807669021597306 %)
[2024-06-21 16:54:39] 2024-06-21 14:54:18,067 | INFO     | right removable region: 337
[2024-06-21 16:54:39] 2024-06-21 14:54:18,068 | INFO     | model: linear, x: [1718961090.0, 1718961151.0, 1718961212.0, 1718961273.0, 1718961334.0, 1718961395.0, 1718961456.0, 1718961517.0, 1718961578.0, 1718961639.0, 1718
[2024-06-21 16:54:39] 2024-06-21 14:54:18,068 | INFO     | sum of square deviations: 11973599384.5
[2024-06-21 16:54:39] 2024-06-21 14:54:18,071 | INFO     | sum of deviations: 83080924173.5
[2024-06-21 16:54:39] 2024-06-21 14:54:18,071 | INFO     | mean x: 1718971368.5
[2024-06-21 16:54:39] 2024-06-21 14:54:18,071 | INFO     | mean y: 2341777.7603550297
[2024-06-21 16:54:39] 2024-06-21 14:54:18,071 | INFO     | -- intersect: -11925043241.28751
[2024-06-21 16:54:39] 2024-06-21 14:54:18,071 | INFO     | intersect: -11925043241.28751
[2024-06-21 16:54:39] 2024-06-21 14:54:18,072 | INFO     | chi2: 2.5214364726827183
[2024-06-21 16:54:39] 2024-06-21 14:54:18,072 | INFO     | current chi2=2.5214364726827183 (change=49.81995739768747 %)
[2024-06-21 16:54:39] 2024-06-21 14:54:18,073 | INFO     | model: linear, x: [1718961395.0, 1718961456.0, 1718961517.0, 1718961578.0, 1718961639.0, 1718961700.0, 1718961761.0, 1718961822.0, 1718961883.0, 1718961944.0, 1718
[2024-06-21 16:54:39] 2024-06-21 14:54:18,073 | INFO     | sum of square deviations: 11450045382.0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,076 | INFO     | sum of deviations: 15146664170.000004
[2024-06-21 16:54:39] 2024-06-21 14:54:18,076 | INFO     | mean x: 1718971521.0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,076 | INFO     | mean y: 2361568.3513513515
[2024-06-21 16:54:39] 2024-06-21 14:54:18,076 | INFO     | -- intersect: -2271575650.0383663
[2024-06-21 16:54:39] 2024-06-21 14:54:18,076 | INFO     | intersect: -2271575650.0383663
[2024-06-21 16:54:39] 2024-06-21 14:54:18,077 | INFO     | chi2: 0.9434460862236491
[2024-06-21 16:54:39] 2024-06-21 14:54:18,077 | INFO     | current chi2=0.9434460862236491 (change=62.58299201883693 %)
[2024-06-21 16:54:39] 2024-06-21 14:54:18,078 | INFO     | model: linear, x: [1718961700.0, 1718961761.0, 1718961822.0, 1718961883.0, 1718961944.0, 1718962005.0, 1718962066.0, 1718962127.0, 1718962188.0, 1718962249.0, 1718
[2024-06-21 16:54:39] 2024-06-21 14:54:18,078 | INFO     | sum of square deviations: 10941980042.0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,081 | INFO     | sum of deviations: -1236838836.5
[2024-06-21 16:54:39] 2024-06-21 14:54:18,081 | INFO     | mean x: 1718971673.5
[2024-06-21 16:54:39] 2024-06-21 14:54:18,081 | INFO     | mean y: 2366464.862804878
[2024-06-21 16:54:39] 2024-06-21 14:54:18,081 | INFO     | -- intersect: 196672332.39933407
[2024-06-21 16:54:39] 2024-06-21 14:54:18,081 | INFO     | intersect: 196672332.39933407
[2024-06-21 16:54:39] 2024-06-21 14:54:18,082 | INFO     | chi2: 0.8259657747753614
[2024-06-21 16:54:39] 2024-06-21 14:54:18,082 | INFO     | current chi2=0.8259657747753614 (change=12.452254894450682 %)
[2024-06-21 16:54:39] 2024-06-21 14:54:18,082 | INFO     | left removable region: 30
[2024-06-21 16:54:39] 2024-06-21 14:54:18,082 | INFO     | model: linear, x: [1718962615.0, 1718962676.0, 1718962737.0, 1718962798.0, 1718962859.0, 1718962920.0, 1718962981.0, 1718963042.0, 1718963103.0, 1718963164.0, 1718
[2024-06-21 16:54:39] 2024-06-21 14:54:18,083 | INFO     | sum of square deviations: 8971993338.0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,085 | INFO     | sum of deviations: 15584063449.999996
[2024-06-21 16:54:39] 2024-06-21 14:54:18,085 | INFO     | mean x: 1718971948.0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,086 | INFO     | mean y: 2374104.951140065
[2024-06-21 16:54:39] 2024-06-21 14:54:18,086 | INFO     | -- intersect: -2983424802.515915
[2024-06-21 16:54:39] 2024-06-21 14:54:18,086 | INFO     | intersect: -2983424802.515915
[2024-06-21 16:54:39] 2024-06-21 14:54:18,086 | INFO     | chi2: 0.0023865120083016995
[2024-06-21 16:54:39] 2024-06-21 14:54:18,087 | INFO     | -- intersect: -2983424802.515915
[2024-06-21 16:54:39] 2024-06-21 14:54:18,087 | INFO     | current memory leak: 1.74 B/s (using 307 data points, chi2=0.00)
[2024-06-21 16:54:39] 2024-06-21 14:54:18,087 | INFO     | ..............................
[2024-06-21 16:54:39] 2024-06-21 14:54:18,087 | INFO     | . Timing measurements:
[2024-06-21 16:54:39] 2024-06-21 14:54:18,087 | INFO     | . get job = 0 s
[2024-06-21 16:54:39] 2024-06-21 14:54:18,087 | INFO     | . initial setup = 1 s
[2024-06-21 16:54:39] 2024-06-21 14:54:18,087 | INFO     | . payload setup = 5 s
[2024-06-21 16:54:39] 2024-06-21 14:54:18,088 | INFO     | . stage-in = 0 s
[2024-06-21 16:54:39] 2024-06-21 14:54:18,088 | INFO     | . payload execution = 20868 s
[2024-06-21 16:54:39] 2024-06-21 14:54:18,088 | INFO     | . stage-out = 0 s
[2024-06-21 16:54:39] 2024-06-21 14:54:18,088 | INFO     | . log creation = 0 s
[2024-06-21 16:54:39] 2024-06-21 14:54:18,088 | INFO     | ..............................
[2024-06-21 16:54:39] 2024-06-21 14:54:18,391 | INFO     | 
[2024-06-21 16:54:39] 2024-06-21 14:54:18,391 | INFO     | job summary report
[2024-06-21 16:54:39] 2024-06-21 14:54:18,391 | INFO     | --------------------------------------------------
[2024-06-21 16:54:39] 2024-06-21 14:54:18,391 | INFO     | PanDA job id: 6238833018
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | task id: 40024023
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | errors: (none)
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | pilot state: finished 
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | transexitcode: 0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | exeerrorcode: 0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | exeerrordiag: 
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | exitcode: 0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | exitmsg: OK
[2024-06-21 16:54:39] 2024-06-21 14:54:18,392 | INFO     | cpuconsumptiontime: 79592 s
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | nevents: 400
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | neventsw: 0
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | pid: 1960579
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | pgrp: 1960579
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | corecount: 4
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | event service: False
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | sizes: {0: 2385982, 1: 2386917, 4: 2387123, 12: 2387151, 20876: 2420646, 20877: 2429812, 20882: 2429926}
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | --------------------------------------------------
[2024-06-21 16:54:39] 2024-06-21 14:54:18,393 | INFO     | 
[2024-06-21 16:54:39] 2024-06-21 14:54:18,394 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-06-21 16:54:39] 2024-06-21 14:54:18,414 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,414 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,416 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 16:54:39] 2024-06-21 14:54:18,417 | INFO     | job 6238833018 has completed (purged errors)
[2024-06-21 16:54:39] 2024-06-21 14:54:18,417 | INFO     | overall cleanup function is called
[2024-06-21 16:54:39] 2024-06-21 14:54:19,424 | INFO     | --- collectZombieJob: --- 10, [1960579]
[2024-06-21 16:54:39] 2024-06-21 14:54:19,424 | INFO     | zombie collector waiting for pid 1960579
[2024-06-21 16:54:39] 2024-06-21 14:54:19,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 16:54:39] 2024-06-21 14:54:20,429 | INFO     | collected zombie processes
[2024-06-21 16:54:39] 2024-06-21 14:54:20,429 | INFO     | will now attempt to kill all subprocesses of pid=1960579
[2024-06-21 16:54:39] 2024-06-21 14:54:20,565 | INFO     | process IDs to be killed: [1960579] (in reverse order)
[2024-06-21 16:54:39] 2024-06-21 14:54:20,662 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 16:54:39] 2024-06-21 14:54:20,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 16:54:39] 2024-06-21 14:54:20,669 | INFO     | did not find any defunct processes belonging to 1960579
[2024-06-21 16:54:39] 2024-06-21 14:54:20,674 | INFO     | did not find any defunct processes belonging to 1960579
[2024-06-21 16:54:39] 2024-06-21 14:54:20,674 | INFO     | ready for new job
[2024-06-21 16:54:39] 2024-06-21 14:54:20,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 16:54:39] 2024-06-21 14:54:20,677 | INFO     | *************************************
[2024-06-21 16:54:39] 2024-06-21 14:54:20,677 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 16:54:39] 2024-06-21 14:54:20,677 | INFO     | *************************************
[2024-06-21 16:54:39] 2024-06-21 14:54:20,677 | INFO     | 
[2024-06-21 16:54:39] 2024-06-21 14:54:20,680 | INFO     | architecture information:
[2024-06-21 16:54:39] 2024-06-21 14:54:20,680 | INFO     | executing command: cat /etc/os-release
[2024-06-21 16:54:39] 2024-06-21 14:54:20,695 | INFO     | cat /etc/os-release:
[2024-06-21 16:54:39] NAME="CentOS Linux"
[2024-06-21 16:54:39] VERSION="7 (Core)"
[2024-06-21 16:54:39] ID="centos"
[2024-06-21 16:54:39] ID_LIKE="rhel fedora"
[2024-06-21 16:54:39] VERSION_ID="7"
[2024-06-21 16:54:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 16:54:39] ANSI_COLOR="0;31"
[2024-06-21 16:54:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 16:54:39] HOME_URL="https://www.centos.org/"
[2024-06-21 16:54:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 16:54:39] 
[2024-06-21 16:54:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 16:54:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 16:54:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 16:54:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 16:54:39] 
[2024-06-21 16:54:39] 2024-06-21 14:54:20,695 | INFO     | *************************************
[2024-06-21 16:54:39] 2024-06-21 14:54:21,198 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-06-21 16:54:39] 2024-06-21 14:54:21,217 | INFO     | sufficient remaining disk space (1663188336640 B)
[2024-06-21 16:54:39] 2024-06-21 14:54:21,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 16:54:39] 2024-06-21 14:54:21,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 16:54:39] 2024-06-21 14:54:21,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 16:54:39] 2024-06-21 14:54:21,588 | INFO     | all payload control threads have been joined
[2024-06-21 16:54:39] 2024-06-21 14:54:21,688 | INFO     | all job control threads have been joined
[2024-06-21 16:54:39] 2024-06-21 14:54:21,824 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 16:54:39] 2024-06-21 14:54:21,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 16:54:39] 2024-06-21 14:54:21,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 16:54:39] 2024-06-21 14:54:21,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:54:39] 2024-06-21 14:54:21,963 | INFO     | aborting loop
[2024-06-21 16:54:39] 2024-06-21 14:54:22,222 | INFO     | [job] retrieve thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:22,234 | INFO     | all data control threads have been joined
[2024-06-21 16:54:39] 2024-06-21 14:54:22,267 | INFO     | [payload] failed_post thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:22,386 | INFO     | [payload] validate_post thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:22,592 | INFO     | [payload] control thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:22,693 | INFO     | [job] control thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:22,729 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:22,968 | INFO     | [job] job monitor thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:23,037 | INFO     | [job] validate thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:23,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:54:39] 2024-06-21 14:54:23,200 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:23,208 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:23,223 | INFO     | [data] copytool_out thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:23,239 | INFO     | [data] control thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:23,342 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 16:54:39] 2024-06-21 14:54:23,703 | INFO     | [data] copytool_in thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:24,160 | INFO     | [job] queue monitor thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:27,348 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:32,037 | INFO     | job.realtimelogging is not enabled
[2024-06-21 16:54:39] 2024-06-21 14:54:33,042 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 16:54:39] 2024-06-21 14:54:34,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47503994369088)>', '<ExcThread(monitor, started 47504178845440)>']
[2024-06-21 16:54:39] 2024-06-21 14:54:34,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 16:54:39] 2024-06-21 14:54:34,888 | INFO     | [monitor] control thread has ended
[2024-06-21 16:54:39] 2024-06-21 14:54:39,047 | INFO     | all workflow threads have been joined
[2024-06-21 16:54:39] 2024-06-21 14:54:39,047 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 16:54:39] 2024-06-21 14:54:39,047 | INFO     | traces error code: 0
[2024-06-21 16:54:39] 2024-06-21 14:54:39,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 16:54:39] 2024-06-21 14:54:39,127 [wrapper] ==== pilot stdout END ====
[2024-06-21 16:54:39] 2024-06-21 14:54:39,130 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 16:54:39] 2024-06-21 14:54:39,132 [wrapper] pilotpid: 1953729
[2024-06-21 16:54:39] 2024-06-21 14:54:39,134 [wrapper] Pilot exit status: 0
[2024-06-21 16:54:39] 2024-06-21 14:54:39,149 [wrapper] pandaids: 6238833018
[2024-06-21 16:54:39] 2024-06-21 14:54:39,205 [wrapper] cleanup supervisor_pilot 2492006 1953730
[2024-06-21 16:54:39] 2024-06-21 14:54:39,207 [wrapper] Test setup, not cleaning
[2024-06-21 16:54:39] 2024-06-21 14:54:39,210 [wrapper] ==== wrapper stdout END ====
[2024-06-21 16:54:39] 2024-06-21 14:54:39,212 [wrapper] ==== wrapper stderr END ====
[2024-06-21 16:54:39] 2024-06-21 14:54:39,216 [wrapper] apfmon messages muted
[2024-06-21 16:54:39]  *** Error codes and diagnostics ***
[2024-06-21 16:54:39]     "exeErrorCode": 0,
[2024-06-21 16:54:39]     "exeErrorDiag": "",
[2024-06-21 16:54:39]     "pilotErrorCode": 0,
[2024-06-21 16:54:39]     "pilotErrorDiag": "",
[2024-06-21 16:54:39]  *** Listing of results directory ***
[2024-06-21 16:54:39] total 834032
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:13 pilot3.tar.gz
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:29 queuedata.json
[2024-06-21 16:54:39] -rwx------ 1 boinc boinc     32308 Jun 20 11:29 runpilot2-wrapper.sh
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc       100 Jun 21 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 16:54:39] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 11:05 run_atlas
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc       105 Jun 21 11:05 job.xml
[2024-06-21 16:54:39] -rw-r--r-- 2 boinc boinc 595625797 Jun 21 11:05 EVNT.40024021._000033.pool.root.1
[2024-06-21 16:54:39] -rw-r--r-- 2 boinc boinc    482479 Jun 21 11:05 input.tar.gz
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc      6455 Jun 21 11:05 init_data.xml
[2024-06-21 16:54:39] -rw-r--r-- 2 boinc boinc     17537 Jun 21 11:05 start_atlas.sh
[2024-06-21 16:54:39] drwxrwx--x 2 boinc boinc      4096 Jun 21 11:05 shared
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc         0 Jun 21 11:05 boinc_lockfile
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc      2514 Jun 21 11:05 pandaJob.out
[2024-06-21 16:54:39] -rw------- 1 boinc boinc       424 Jun 21 11:05 setup.sh.local
[2024-06-21 16:54:39] -rw------- 1 boinc boinc   1023459 Jun 21 11:05 agis_schedconf.cvmfs.json
[2024-06-21 16:54:39] -rw------- 1 boinc boinc   1321251 Jun 21 11:05 cric_ddmendpoints.json
[2024-06-21 16:54:39] drwx------ 4 boinc boinc      4096 Jun 21 11:06 pilot3
[2024-06-21 16:54:39] -rw------- 1 boinc boinc 249562631 Jun 21 16:53 HITS.40024023._000248.pool.root.1
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc       532 Jun 21 16:53 boinc_task_state.xml
[2024-06-21 16:54:39] -rw------- 1 boinc boinc      1045 Jun 21 16:54 memory_monitor_summary.json
[2024-06-21 16:54:39] -rw------- 1 boinc boinc        95 Jun 21 16:54 pilot_heartbeat.json
[2024-06-21 16:54:39] -rw------- 1 boinc boinc         0 Jun 21 16:54 agis_ddmendpoints.agis.ALL.json
[2024-06-21 16:54:39] -rw------- 1 boinc boinc    425477 Jun 21 16:54 log.40024023._000248.job.log.tgz.1
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc      8192 Jun 21 16:54 boinc_mmap_file
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc        28 Jun 21 16:54 wrapper_checkpoint.txt
[2024-06-21 16:54:39] -rw------- 1 boinc boinc      7759 Jun 21 16:54 heartbeat.json
[2024-06-21 16:54:39] -rw------- 1 boinc boinc      4294 Jun 21 16:54 pilotlog.txt
[2024-06-21 16:54:39] -rw------- 1 boinc boinc   2236984 Jun 21 16:54 log.40024023._000248.job.log.1
[2024-06-21 16:54:39] -rw------- 1 boinc boinc       357 Jun 21 16:54 output.list
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc       620 Jun 21 16:54 runtime_log
[2024-06-21 16:54:39] -rw------- 1 boinc boinc   2682880 Jun 21 16:54 result.tar.gz
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc     11410 Jun 21 16:54 runtime_log.err
[2024-06-21 16:54:39] -rw------- 1 boinc boinc       659 Jun 21 16:54 fBoLDmzHTe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmL3kKDmrAyoim.diag
[2024-06-21 16:54:39] -rw-r--r-- 1 boinc boinc     21277 Jun 21 16:54 stderr.txt
[2024-06-21 16:54:39] HITS file was successfully produced:
[2024-06-21 16:54:39] -rw------- 1 boinc boinc 249562631 Jun 21 16:53 shared/HITS.pool.root.1
[2024-06-21 16:54:39]  *** Contents of shared directory: ***
[2024-06-21 16:54:39] total 828504
[2024-06-21 16:54:39] -rw-r--r-- 2 boinc boinc 595625797 Jun 21 11:05 ATLAS.root_0
[2024-06-21 16:54:39] -rw-r--r-- 2 boinc boinc    482479 Jun 21 11:05 input.tar.gz
[2024-06-21 16:54:39] -rw-r--r-- 2 boinc boinc     17537 Jun 21 11:05 start_atlas.sh
[2024-06-21 16:54:39] -rw------- 1 boinc boinc 249562631 Jun 21 16:53 HITS.pool.root.1
[2024-06-21 16:54:39] -rw------- 1 boinc boinc   2682880 Jun 21 16:54 result.tar.gz
16:54:41 (1949524): run_atlas exited; CPU time 79352.636425
16:54:41 (1949524): called boinc_finish(0)

</stderr_txt>
]]>

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