Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:13:35 (4187276): wrapper (7.7.26015): starting
10:13:35 (4187276): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 10:13:35] Arguments: --nthreads 4
[2024-06-22 10:13:35] Threads: 4
[2024-06-22 10:13:35] Checking for CVMFS
[2024-06-22 10:13:35] No cvmfs_config command found, will try listing directly
[2024-06-22 10:13:35] CVMFS is ok
[2024-06-22 10:13:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 10:13:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 10:13:35] Further information can be found at the LHC@home message board.
[2024-06-22 10:13:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 10:13:35] Checking for apptainer binary...
[2024-06-22 10:13:35] which: no apptainer in ((null))
[2024-06-22 10:13:35] apptainer is not installed, using version from CVMFS
[2024-06-22 10:13:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 10:13:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2024-06-22 10:13:36] apptainer works
[2024-06-22 10:13:36] Set ATHENA_PROC_NUMBER=4
[2024-06-22 10:13:36] Set ATHENA_CORE_NUMBER=4
[2024-06-22 10:13:36] Starting ATLAS job with PandaID=6238833000
[2024-06-22 10:13:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 16:01:46]  *** The last 200 lines of the pilot log: ***
[2024-06-22 16:01:46] 2024-06-22 14:01:31,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 16:01:46] 2024-06-22 14:01:31,548 | INFO     | fitting pss+swap vs Time
[2024-06-22 16:01:46] 2024-06-22 14:01:31,549 | INFO     | model: linear, x: [1719044063.0, 1719044124.0, 1719044185.0, 1719044246.0, 1719044307.0, 1719044368.0, 1719044429.0, 1719044490.0, 1719044551.0, 1719044612.0, 1719
[2024-06-22 16:01:46] 2024-06-22 14:01:31,549 | INFO     | sum of square deviations: 12403750705.5
[2024-06-22 16:01:46] 2024-06-22 14:01:31,553 | INFO     | sum of deviations: 92762986212.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,553 | INFO     | mean x: 1719054463.5
[2024-06-22 16:01:46] 2024-06-22 14:01:31,553 | INFO     | mean y: 2342570.6900584796
[2024-06-22 16:01:46] 2024-06-22 14:01:31,553 | INFO     | -- intersect: -12853819188.883091
[2024-06-22 16:01:46] 2024-06-22 14:01:31,553 | INFO     | intersect: -12853819188.883091
[2024-06-22 16:01:46] 2024-06-22 14:01:31,554 | INFO     | chi2: 4.149164437590464
[2024-06-22 16:01:46] 2024-06-22 14:01:31,554 | INFO     | model: linear, x: [1719044063.0, 1719044124.0, 1719044185.0, 1719044246.0, 1719044307.0, 1719044368.0, 1719044429.0, 1719044490.0, 1719044551.0, 1719044612.0, 1719
[2024-06-22 16:01:46] 2024-06-22 14:01:31,555 | INFO     | sum of square deviations: 11867638328.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,558 | INFO     | sum of deviations: 112642884321.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,558 | INFO     | mean x: 1719054311.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,558 | INFO     | mean y: 2348152.830860534
[2024-06-22 16:01:46] 2024-06-22 14:01:31,558 | INFO     | -- intersect: -16314228957.429165
[2024-06-22 16:01:46] 2024-06-22 14:01:31,559 | INFO     | intersect: -16314228957.429165
[2024-06-22 16:01:46] 2024-06-22 14:01:31,559 | INFO     | chi2: 3.3888201219045473
[2024-06-22 16:01:46] 2024-06-22 14:01:31,559 | INFO     | current chi2=3.3888201219045473 (change=18.325239385486253 %)
[2024-06-22 16:01:46] 2024-06-22 14:01:31,559 | INFO     | right removable region: 336
[2024-06-22 16:01:46] 2024-06-22 14:01:31,560 | INFO     | model: linear, x: [1719044368.0, 1719044429.0, 1719044490.0, 1719044551.0, 1719044612.0, 1719044673.0, 1719044734.0, 1719044795.0, 1719044856.0, 1719044917.0, 1719
[2024-06-22 16:01:46] 2024-06-22 14:01:31,560 | INFO     | sum of square deviations: 11867638328.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,563 | INFO     | sum of deviations: 17172627829.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,564 | INFO     | mean x: 1719054616.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,564 | INFO     | mean y: 2364024.53115727
[2024-06-22 16:01:46] 2024-06-22 14:01:31,564 | INFO     | -- intersect: -2485130481.3169575
[2024-06-22 16:01:46] 2024-06-22 14:01:31,564 | INFO     | intersect: -2485130481.3169575
[2024-06-22 16:01:46] 2024-06-22 14:01:31,565 | INFO     | chi2: 1.9517892151158804
[2024-06-22 16:01:46] 2024-06-22 14:01:31,565 | INFO     | current chi2=1.9517892151158804 (change=52.959463417908324 %)
[2024-06-22 16:01:46] 2024-06-22 14:01:31,565 | INFO     | model: linear, x: [1719044673.0, 1719044734.0, 1719044795.0, 1719044856.0, 1719044917.0, 1719044978.0, 1719045039.0, 1719045100.0, 1719045161.0, 1719045222.0, 1719
[2024-06-22 16:01:46] 2024-06-22 14:01:31,566 | INFO     | sum of square deviations: 11347200663.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,569 | INFO     | sum of deviations: -38562547479.5
[2024-06-22 16:01:46] 2024-06-22 14:01:31,569 | INFO     | mean x: 1719054768.5
[2024-06-22 16:01:46] 2024-06-22 14:01:31,569 | INFO     | mean y: 2380356.1174698793
[2024-06-22 16:01:46] 2024-06-22 14:01:31,569 | INFO     | -- intersect: 5844449523.564089
[2024-06-22 16:01:46] 2024-06-22 14:01:31,569 | INFO     | intersect: 5844449523.564089
[2024-06-22 16:01:46] 2024-06-22 14:01:31,570 | INFO     | chi2: 0.8690331548131318
[2024-06-22 16:01:46] 2024-06-22 14:01:31,570 | INFO     | current chi2=0.8690331548131318 (change=55.475050887524446 %)
[2024-06-22 16:01:46] 2024-06-22 14:01:31,571 | INFO     | model: linear, x: [1719044978.0, 1719045039.0, 1719045100.0, 1719045161.0, 1719045222.0, 1719045283.0, 1719045344.0, 1719045405.0, 1719045466.0, 1719045527.0, 1719
[2024-06-22 16:01:46] 2024-06-22 14:01:31,571 | INFO     | sum of square deviations: 10842205148.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,574 | INFO     | sum of deviations: -45216325334.999985
[2024-06-22 16:01:46] 2024-06-22 14:01:31,574 | INFO     | mean x: 1719054921.0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,574 | INFO     | mean y: 2382346.3853211007
[2024-06-22 16:01:46] 2024-06-22 14:01:31,575 | INFO     | -- intersect: 7171527876.804194
[2024-06-22 16:01:46] 2024-06-22 14:01:31,575 | INFO     | intersect: 7171527876.804194
[2024-06-22 16:01:46] 2024-06-22 14:01:31,575 | INFO     | chi2: 0.8244881917883606
[2024-06-22 16:01:46] 2024-06-22 14:01:31,575 | INFO     | current chi2=0.8244881917883606 (change=5.125807085501782 %)
[2024-06-22 16:01:46] 2024-06-22 14:01:31,576 | INFO     | left removable region: 30
[2024-06-22 16:01:46] 2024-06-22 14:01:31,576 | INFO     | model: linear, x: [1719045893.0, 1719045954.0, 1719046015.0, 1719046076.0, 1719046137.0, 1719046198.0, 1719046259.0, 1719046320.0, 1719046381.0, 1719046442.0, 1719
[2024-06-22 16:01:46] 2024-06-22 14:01:31,576 | INFO     | sum of square deviations: 8884603792.5
[2024-06-22 16:01:46] 2024-06-22 14:01:31,579 | INFO     | sum of deviations: -12601056517.000006
[2024-06-22 16:01:46] 2024-06-22 14:01:31,579 | INFO     | mean x: 1719055195.5
[2024-06-22 16:01:46] 2024-06-22 14:01:31,579 | INFO     | mean y: 2384933.895424837
[2024-06-22 16:01:46] 2024-06-22 14:01:31,579 | INFO     | -- intersect: 2440525359.766081
[2024-06-22 16:01:46] 2024-06-22 14:01:31,580 | INFO     | intersect: 2440525359.766081
[2024-06-22 16:01:46] 2024-06-22 14:01:31,580 | INFO     | chi2: 0.028185274889653823
[2024-06-22 16:01:46] 2024-06-22 14:01:31,580 | INFO     | -- intersect: 2440525359.766081
[2024-06-22 16:01:46] 2024-06-22 14:01:31,581 | INFO     | current memory leak: -1.42 B/s (using 306 data points, chi2=0.03)
[2024-06-22 16:01:46] 2024-06-22 14:01:31,581 | INFO     | ..............................
[2024-06-22 16:01:46] 2024-06-22 14:01:31,581 | INFO     | . Timing measurements:
[2024-06-22 16:01:46] 2024-06-22 14:01:31,581 | INFO     | . get job = 0 s
[2024-06-22 16:01:46] 2024-06-22 14:01:31,582 | INFO     | . initial setup = 1 s
[2024-06-22 16:01:46] 2024-06-22 14:01:31,582 | INFO     | . payload setup = 7 s
[2024-06-22 16:01:46] 2024-06-22 14:01:31,582 | INFO     | . stage-in = 0 s
[2024-06-22 16:01:46] 2024-06-22 14:01:31,582 | INFO     | . payload execution = 20825 s
[2024-06-22 16:01:46] 2024-06-22 14:01:31,582 | INFO     | . stage-out = 1 s
[2024-06-22 16:01:46] 2024-06-22 14:01:31,582 | INFO     | . log creation = 0 s
[2024-06-22 16:01:46] 2024-06-22 14:01:31,582 | INFO     | ..............................
[2024-06-22 16:01:46] 2024-06-22 14:01:31,657 | INFO     | 
[2024-06-22 16:01:46] 2024-06-22 14:01:31,657 | INFO     | job summary report
[2024-06-22 16:01:46] 2024-06-22 14:01:31,657 | INFO     | --------------------------------------------------
[2024-06-22 16:01:46] 2024-06-22 14:01:31,657 | INFO     | PanDA job id: 6238833000
[2024-06-22 16:01:46] 2024-06-22 14:01:31,657 | INFO     | task id: 40024023
[2024-06-22 16:01:46] 2024-06-22 14:01:31,657 | INFO     | errors: (none)
[2024-06-22 16:01:46] 2024-06-22 14:01:31,657 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | pilot state: finished 
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | transexitcode: 0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | exeerrorcode: 0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | exeerrordiag: 
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | exitcode: 0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | exitmsg: OK
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | cpuconsumptiontime: 79540 s
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | nevents: 400
[2024-06-22 16:01:46] 2024-06-22 14:01:31,658 | INFO     | neventsw: 0
[2024-06-22 16:01:46] 2024-06-22 14:01:31,659 | INFO     | pid: 4810
[2024-06-22 16:01:46] 2024-06-22 14:01:31,659 | INFO     | pgrp: 4810
[2024-06-22 16:01:46] 2024-06-22 14:01:31,659 | INFO     | corecount: 4
[2024-06-22 16:01:46] 2024-06-22 14:01:31,659 | INFO     | event service: False
[2024-06-22 16:01:46] 2024-06-22 14:01:31,659 | INFO     | sizes: {0: 2386738, 1: 2386937, 6: 2387143, 12: 2387171, 20836: 2420491, 20837: 2429657, 20844: 2429771}
[2024-06-22 16:01:46] 2024-06-22 14:01:31,659 | INFO     | --------------------------------------------------
[2024-06-22 16:01:46] 2024-06-22 14:01:31,660 | INFO     | 
[2024-06-22 16:01:46] 2024-06-22 14:01:31,660 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-06-22 16:01:46] 2024-06-22 14:01:31,663 | WARNING  | process 4810 is no longer using CPU - aborting
[2024-06-22 16:01:46] 2024-06-22 14:01:31,663 | INFO     | aborting job monitoring since job object (job id=6238833000) has expired
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,683 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | job 6238833000 has completed (purged errors)
[2024-06-22 16:01:46] 2024-06-22 14:01:31,684 | INFO     | overall cleanup function is called
[2024-06-22 16:01:46] 2024-06-22 14:01:32,691 | INFO     | --- collectZombieJob: --- 10, [4810]
[2024-06-22 16:01:46] 2024-06-22 14:01:32,691 | INFO     | zombie collector waiting for pid 4810
[2024-06-22 16:01:46] 2024-06-22 14:01:32,691 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 16:01:46] 2024-06-22 14:01:33,696 | INFO     | collected zombie processes
[2024-06-22 16:01:46] 2024-06-22 14:01:33,696 | INFO     | will now attempt to kill all subprocesses of pid=4810
[2024-06-22 16:01:46] 2024-06-22 14:01:33,819 | INFO     | process IDs to be killed: [4810] (in reverse order)
[2024-06-22 16:01:46] 2024-06-22 14:01:33,912 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 16:01:46] 2024-06-22 14:01:33,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 16:01:46] 2024-06-22 14:01:33,919 | INFO     | did not find any defunct processes belonging to 4810
[2024-06-22 16:01:46] 2024-06-22 14:01:33,925 | INFO     | did not find any defunct processes belonging to 4810
[2024-06-22 16:01:46] 2024-06-22 14:01:33,925 | INFO     | ready for new job
[2024-06-22 16:01:46] 2024-06-22 14:01:33,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 16:01:46] 2024-06-22 14:01:33,928 | INFO     | *************************************
[2024-06-22 16:01:46] 2024-06-22 14:01:33,928 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 16:01:46] 2024-06-22 14:01:33,928 | INFO     | *************************************
[2024-06-22 16:01:46] 2024-06-22 14:01:33,929 | INFO     | 
[2024-06-22 16:01:46] 2024-06-22 14:01:33,931 | INFO     | architecture information:
[2024-06-22 16:01:46] 2024-06-22 14:01:33,931 | INFO     | executing command: cat /etc/os-release
[2024-06-22 16:01:46] 2024-06-22 14:01:33,948 | INFO     | cat /etc/os-release:
[2024-06-22 16:01:46] NAME="CentOS Linux"
[2024-06-22 16:01:46] VERSION="7 (Core)"
[2024-06-22 16:01:46] ID="centos"
[2024-06-22 16:01:46] ID_LIKE="rhel fedora"
[2024-06-22 16:01:46] VERSION_ID="7"
[2024-06-22 16:01:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 16:01:46] ANSI_COLOR="0;31"
[2024-06-22 16:01:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 16:01:46] HOME_URL="https://www.centos.org/"
[2024-06-22 16:01:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 16:01:46] 
[2024-06-22 16:01:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 16:01:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 16:01:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 16:01:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 16:01:46] 
[2024-06-22 16:01:46] 2024-06-22 14:01:33,948 | INFO     | *************************************
[2024-06-22 16:01:46] 2024-06-22 14:01:34,451 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-06-22 16:01:46] 2024-06-22 14:01:34,470 | INFO     | sufficient remaining disk space (1661482303488 B)
[2024-06-22 16:01:46] 2024-06-22 14:01:34,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 16:01:46] 2024-06-22 14:01:34,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 16:01:46] 2024-06-22 14:01:34,668 | INFO     | all payload control threads have been joined
[2024-06-22 16:01:46] 2024-06-22 14:01:34,783 | INFO     | all job control threads have been joined
[2024-06-22 16:01:46] 2024-06-22 14:01:35,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 16:01:46] 2024-06-22 14:01:35,171 | INFO     | aborting loop
[2024-06-22 16:01:46] 2024-06-22 14:01:35,313 | INFO     | all data control threads have been joined
[2024-06-22 16:01:46] 2024-06-22 14:01:35,411 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 16:01:46] 2024-06-22 14:01:35,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 16:01:46] 2024-06-22 14:01:35,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 16:01:46] 2024-06-22 14:01:35,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 16:01:46] 2024-06-22 14:01:35,475 | INFO     | [job] retrieve thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:35,562 | INFO     | [payload] failed_post thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:35,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 16:01:46] 2024-06-22 14:01:35,673 | INFO     | [payload] control thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:35,788 | INFO     | [job] control thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:35,950 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:35,961 | INFO     | [data] copytool_in thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:35,971 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:36,009 | INFO     | [payload] validate_post thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:36,176 | INFO     | [job] job monitor thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:36,179 | INFO     | [job] validate thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:36,319 | INFO     | [data] control thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:36,466 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:36,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 16:01:46] 2024-06-22 14:01:36,722 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:37,470 | INFO     | [data] copytool_out thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:37,671 | INFO     | [job] queue monitor thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:39,570 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 16:01:46] 2024-06-22 14:01:40,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47109665854528)>', '<ExcThread(monitor, started 47109854533376)>']
[2024-06-22 16:01:46] 2024-06-22 14:01:40,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 16:01:46] 2024-06-22 14:01:40,434 | INFO     | [monitor] control thread has ended
[2024-06-22 16:01:46] 2024-06-22 14:01:45,201 | INFO     | all workflow threads have been joined
[2024-06-22 16:01:46] 2024-06-22 14:01:45,201 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 16:01:46] 2024-06-22 14:01:45,201 | INFO     | traces error code: 0
[2024-06-22 16:01:46] 2024-06-22 14:01:45,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 16:01:46] 2024-06-22 14:01:45,318 [wrapper] ==== pilot stdout END ====
[2024-06-22 16:01:46] 2024-06-22 14:01:45,321 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 16:01:46] 2024-06-22 14:01:45,323 [wrapper] pilotpid: 4191514
[2024-06-22 16:01:46] 2024-06-22 14:01:45,325 [wrapper] Pilot exit status: 0
[2024-06-22 16:01:46] 2024-06-22 14:01:45,418 [wrapper] pandaids: 6238833000
[2024-06-22 16:01:46] 2024-06-22 14:01:45,497 [wrapper] cleanup supervisor_pilot  538743 4191515
[2024-06-22 16:01:46] 2024-06-22 14:01:45,499 [wrapper] Test setup, not cleaning
[2024-06-22 16:01:46] 2024-06-22 14:01:45,502 [wrapper] ==== wrapper stdout END ====
[2024-06-22 16:01:46] 2024-06-22 14:01:45,508 [wrapper] ==== wrapper stderr END ====
[2024-06-22 16:01:46] 2024-06-22 14:01:45,515 [wrapper] apfmon messages muted
[2024-06-22 16:01:46]  *** Error codes and diagnostics ***
[2024-06-22 16:01:46]     "exeErrorCode": 0,
[2024-06-22 16:01:46]     "exeErrorDiag": "",
[2024-06-22 16:01:46]     "pilotErrorCode": 0,
[2024-06-22 16:01:46]     "pilotErrorDiag": "",
[2024-06-22 16:01:46]  *** Listing of results directory ***
[2024-06-22 16:01:46] total 845644
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:13 pilot3.tar.gz
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:29 queuedata.json
[2024-06-22 16:01:46] -rwx------ 1 boinc boinc     32308 Jun 20 11:29 runpilot2-wrapper.sh
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc       100 Jun 22 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 16:01:46] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 10:13 run_atlas
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc       105 Jun 22 10:13 job.xml
[2024-06-22 16:01:46] -rw-r--r-- 2 boinc boinc 595625797 Jun 22 10:13 EVNT.40024021._000033.pool.root.1
[2024-06-22 16:01:46] -rw-r--r-- 2 boinc boinc     17537 Jun 22 10:13 start_atlas.sh
[2024-06-22 16:01:46] drwxrwx--x 2 boinc boinc      4096 Jun 22 10:13 shared
[2024-06-22 16:01:46] -rw-r--r-- 2 boinc boinc    482484 Jun 22 10:13 input.tar.gz
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc      6455 Jun 22 10:13 init_data.xml
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc         0 Jun 22 10:13 boinc_lockfile
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc      2514 Jun 22 10:13 pandaJob.out
[2024-06-22 16:01:46] -rw------- 1 boinc boinc       424 Jun 22 10:13 setup.sh.local
[2024-06-22 16:01:46] -rw------- 1 boinc boinc   1025969 Jun 22 10:13 agis_schedconf.cvmfs.json
[2024-06-22 16:01:46] -rw------- 1 boinc boinc   1321363 Jun 22 10:13 cric_ddmendpoints.json
[2024-06-22 16:01:46] drwx------ 4 boinc boinc      4096 Jun 22 10:13 pilot3
[2024-06-22 16:01:46] -rw------- 1 boinc boinc 261619111 Jun 22 16:00 HITS.40024023._000230.pool.root.1
[2024-06-22 16:01:46] -rw------- 1 boinc boinc        95 Jun 22 16:01 pilot_heartbeat.json
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc       532 Jun 22 16:01 boinc_task_state.xml
[2024-06-22 16:01:46] -rw------- 1 boinc boinc      1047 Jun 22 16:01 memory_monitor_summary.json
[2024-06-22 16:01:46] -rw------- 1 boinc boinc         0 Jun 22 16:01 agis_ddmendpoints.agis.ALL.json
[2024-06-22 16:01:46] -rw------- 1 boinc boinc    400592 Jun 22 16:01 log.40024023._000230.job.log.tgz.1
[2024-06-22 16:01:46] -rw------- 1 boinc boinc      7761 Jun 22 16:01 heartbeat.json
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc        28 Jun 22 16:01 wrapper_checkpoint.txt
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc      8192 Jun 22 16:01 boinc_mmap_file
[2024-06-22 16:01:46] -rw------- 1 boinc boinc      4222 Jun 22 16:01 pilotlog.txt
[2024-06-22 16:01:46] -rw------- 1 boinc boinc   2177200 Jun 22 16:01 log.40024023._000230.job.log.1
[2024-06-22 16:01:46] -rw------- 1 boinc boinc       357 Jun 22 16:01 output.list
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc       620 Jun 22 16:01 runtime_log
[2024-06-22 16:01:46] -rw------- 1 boinc boinc   2600960 Jun 22 16:01 result.tar.gz
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc     11410 Jun 22 16:01 runtime_log.err
[2024-06-22 16:01:46] -rw------- 1 boinc boinc       659 Jun 22 16:01 4ncLDmzHTe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmF3kKDm1NSg7n.diag
[2024-06-22 16:01:46] -rw-r--r-- 1 boinc boinc     21288 Jun 22 16:01 stderr.txt
[2024-06-22 16:01:46] HITS file was successfully produced:
[2024-06-22 16:01:46] -rw------- 1 boinc boinc 261619111 Jun 22 16:00 shared/HITS.pool.root.1
[2024-06-22 16:01:46]  *** Contents of shared directory: ***
[2024-06-22 16:01:46] total 840196
[2024-06-22 16:01:46] -rw-r--r-- 2 boinc boinc 595625797 Jun 22 10:13 ATLAS.root_0
[2024-06-22 16:01:46] -rw-r--r-- 2 boinc boinc     17537 Jun 22 10:13 start_atlas.sh
[2024-06-22 16:01:46] -rw-r--r-- 2 boinc boinc    482484 Jun 22 10:13 input.tar.gz
[2024-06-22 16:01:46] -rw------- 1 boinc boinc 261619111 Jun 22 16:00 HITS.pool.root.1
[2024-06-22 16:01:46] -rw------- 1 boinc boinc   2600960 Jun 22 16:01 result.tar.gz
16:01:48 (4187276): run_atlas exited; CPU time 79334.338370
16:01:48 (4187276): called boinc_finish(0)

</stderr_txt>
]]>

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