Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:23:22 (4143393): wrapper (7.7.26015): starting
09:23:22 (4143393): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 09:23:22] Arguments: --nthreads 4
[2024-06-22 09:23:22] Threads: 4
[2024-06-22 09:23:22] Checking for CVMFS
[2024-06-22 09:23:22] No cvmfs_config command found, will try listing directly
[2024-06-22 09:23:22] CVMFS is ok
[2024-06-22 09:23:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 09:23:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 09:23:22] Further information can be found at the LHC@home message board.
[2024-06-22 09:23:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 09:23:22] Checking for apptainer binary...
[2024-06-22 09:23:22] which: no apptainer in ((null))
[2024-06-22 09:23:22] apptainer is not installed, using version from CVMFS
[2024-06-22 09:23:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 09:23:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-22 09:23:23] apptainer works
[2024-06-22 09:23:23] Set ATHENA_PROC_NUMBER=4
[2024-06-22 09:23:23] Set ATHENA_CORE_NUMBER=4
[2024-06-22 09:23:23] Starting ATLAS job with PandaID=6238832986
[2024-06-22 09:23:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 14:56:05]  *** The last 200 lines of the pilot log: ***
[2024-06-22 14:56:05] 2024-06-22 12:55:45,356 | INFO     | fitting pss+swap vs Time
[2024-06-22 14:56:05] 2024-06-22 12:55:45,356 | INFO     | model: linear, x: [1719041040.0, 1719041101.0, 1719041162.0, 1719041223.0, 1719041284.0, 1719041345.0, 1719041406.0, 1719041467.0, 1719041528.0, 1719041589.0, 1719
[2024-06-22 14:56:05] 2024-06-22 12:55:45,356 | INFO     | sum of square deviations: 10842205148.0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,358 | INFO     | sum of deviations: 117891869782.99998
[2024-06-22 14:56:05] 2024-06-22 12:55:45,358 | INFO     | mean x: 1719050983.0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,358 | INFO     | mean y: 2323486.3363914373
[2024-06-22 14:56:05] 2024-06-22 12:55:45,358 | INFO     | -- intersect: -18689642942.241844
[2024-06-22 14:56:05] 2024-06-22 12:55:45,358 | INFO     | intersect: -18689642942.241844
[2024-06-22 14:56:05] 2024-06-22 12:55:45,358 | INFO     | chi2: 4.657413535538758
[2024-06-22 14:56:05] 2024-06-22 12:55:45,359 | INFO     | model: linear, x: [1719041040.0, 1719041101.0, 1719041162.0, 1719041223.0, 1719041284.0, 1719041345.0, 1719041406.0, 1719041467.0, 1719041528.0, 1719041589.0, 1719
[2024-06-22 14:56:05] 2024-06-22 12:55:45,359 | INFO     | sum of square deviations: 10352419220.5
[2024-06-22 14:56:05] 2024-06-22 12:55:45,360 | INFO     | sum of deviations: 136683312836.50002
[2024-06-22 14:56:05] 2024-06-22 12:55:45,360 | INFO     | mean x: 1719050830.5
[2024-06-22 14:56:05] 2024-06-22 12:55:45,361 | INFO     | mean y: 2329255.8602484474
[2024-06-22 14:56:05] 2024-06-22 12:55:45,361 | INFO     | -- intersect: -22694352306.435326
[2024-06-22 14:56:05] 2024-06-22 12:55:45,361 | INFO     | intersect: -22694352306.435326
[2024-06-22 14:56:05] 2024-06-22 12:55:45,361 | INFO     | chi2: 3.862692624887505
[2024-06-22 14:56:05] 2024-06-22 12:55:45,361 | INFO     | current chi2=3.862692624887505 (change=17.06356767736155 %)
[2024-06-22 14:56:05] 2024-06-22 12:55:45,361 | INFO     | right removable region: 321
[2024-06-22 14:56:05] 2024-06-22 12:55:45,361 | INFO     | model: linear, x: [1719041345.0, 1719041406.0, 1719041467.0, 1719041528.0, 1719041589.0, 1719041650.0, 1719041711.0, 1719041772.0, 1719041833.0, 1719041894.0, 1719
[2024-06-22 14:56:05] 2024-06-22 12:55:45,361 | INFO     | sum of square deviations: 10352419220.5
[2024-06-22 14:56:05] 2024-06-22 12:55:45,363 | INFO     | sum of deviations: 43612302274.99998
[2024-06-22 14:56:05] 2024-06-22 12:55:45,363 | INFO     | mean x: 1719051135.5
[2024-06-22 14:56:05] 2024-06-22 12:55:45,363 | INFO     | mean y: 2346570.894409938
[2024-06-22 14:56:05] 2024-06-22 12:55:45,363 | INFO     | -- intersect: -7239610709.887633
[2024-06-22 14:56:05] 2024-06-22 12:55:45,363 | INFO     | intersect: -7239610709.887633
[2024-06-22 14:56:05] 2024-06-22 12:55:45,364 | INFO     | chi2: 2.3419051964071906
[2024-06-22 14:56:05] 2024-06-22 12:55:45,364 | INFO     | current chi2=2.3419051964071906 (change=49.71661462876122 %)
[2024-06-22 14:56:05] 2024-06-22 12:55:45,364 | INFO     | model: linear, x: [1719041650.0, 1719041711.0, 1719041772.0, 1719041833.0, 1719041894.0, 1719041955.0, 1719042016.0, 1719042077.0, 1719042138.0, 1719042199.0, 1719
[2024-06-22 14:56:05] 2024-06-22 12:55:45,364 | INFO     | sum of square deviations: 9877610318.0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,366 | INFO     | sum of deviations: -17228705555.999992
[2024-06-22 14:56:05] 2024-06-22 12:55:45,366 | INFO     | mean x: 1719051288.0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,366 | INFO     | mean y: 2366114.3059936906
[2024-06-22 14:56:05] 2024-06-22 12:55:45,366 | INFO     | -- intersect: 3000766286.323646
[2024-06-22 14:56:05] 2024-06-22 12:55:45,366 | INFO     | intersect: 3000766286.323646
[2024-06-22 14:56:05] 2024-06-22 12:55:45,366 | INFO     | chi2: 0.9263269525619842
[2024-06-22 14:56:05] 2024-06-22 12:55:45,366 | INFO     | current chi2=0.9263269525619842 (change=60.44558276811978 %)
[2024-06-22 14:56:05] 2024-06-22 12:55:45,367 | INFO     | model: linear, x: [1719041955.0, 1719042016.0, 1719042077.0, 1719042138.0, 1719042199.0, 1719042260.0, 1719042321.0, 1719042382.0, 1719042443.0, 1719042504.0, 1719
[2024-06-22 14:56:05] 2024-06-22 12:55:45,367 | INFO     | sum of square deviations: 9417545878.0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,368 | INFO     | sum of deviations: -27110823926.5
[2024-06-22 14:56:05] 2024-06-22 12:55:45,368 | INFO     | mean x: 1719051440.5
[2024-06-22 14:56:05] 2024-06-22 12:55:45,368 | INFO     | mean y: 2369360.4583333335
[2024-06-22 14:56:05] 2024-06-22 12:55:45,368 | INFO     | -- intersect: 4951100327.924473
[2024-06-22 14:56:05] 2024-06-22 12:55:45,369 | INFO     | intersect: 4951100327.924473
[2024-06-22 14:56:05] 2024-06-22 12:55:45,369 | INFO     | chi2: 0.8438286998977848
[2024-06-22 14:56:05] 2024-06-22 12:55:45,369 | INFO     | current chi2=0.8438286998977848 (change=8.905954040960406 %)
[2024-06-22 14:56:05] 2024-06-22 12:55:45,369 | INFO     | left removable region: 30
[2024-06-22 14:56:05] 2024-06-22 12:55:45,369 | INFO     | model: linear, x: [1719042870.0, 1719042931.0, 1719042992.0, 1719043053.0, 1719043114.0, 1719043175.0, 1719043236.0, 1719043297.0, 1719043358.0, 1719043419.0, 1719
[2024-06-22 14:56:05] 2024-06-22 12:55:45,369 | INFO     | sum of square deviations: 7641036290.0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,371 | INFO     | sum of deviations: -2994721982.999999
[2024-06-22 14:56:05] 2024-06-22 12:55:45,371 | INFO     | mean x: 1719051715.0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,371 | INFO     | mean y: 2374627.7766323024
[2024-06-22 14:56:05] 2024-06-22 12:55:45,371 | INFO     | -- intersect: 676115958.8525968
[2024-06-22 14:56:05] 2024-06-22 12:55:45,371 | INFO     | intersect: 676115958.8525968
[2024-06-22 14:56:05] 2024-06-22 12:55:45,371 | INFO     | chi2: 0.01669905692637061
[2024-06-22 14:56:05] 2024-06-22 12:55:45,371 | INFO     | -- intersect: 676115958.8525968
[2024-06-22 14:56:05] 2024-06-22 12:55:45,371 | INFO     | current memory leak: -0.39 B/s (using 291 data points, chi2=0.02)
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | ..............................
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | . Timing measurements:
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | . get job = 0 s
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | . initial setup = 1 s
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | . payload setup = 5 s
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | . stage-in = 0 s
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | . payload execution = 19900 s
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | . stage-out = 0 s
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | . log creation = 0 s
[2024-06-22 14:56:05] 2024-06-22 12:55:45,372 | INFO     | ..............................
[2024-06-22 14:56:05] 2024-06-22 12:55:45,430 | INFO     | 
[2024-06-22 14:56:05] 2024-06-22 12:55:45,431 | INFO     | job summary report
[2024-06-22 14:56:05] 2024-06-22 12:55:45,431 | INFO     | --------------------------------------------------
[2024-06-22 14:56:05] 2024-06-22 12:55:45,431 | INFO     | PanDA job id: 6238832986
[2024-06-22 14:56:05] 2024-06-22 12:55:45,431 | INFO     | task id: 40024023
[2024-06-22 14:56:05] 2024-06-22 12:55:45,431 | INFO     | errors: (none)
[2024-06-22 14:56:05] 2024-06-22 12:55:45,431 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 14:56:05] 2024-06-22 12:55:45,431 | INFO     | pilot state: finished 
[2024-06-22 14:56:05] 2024-06-22 12:55:45,432 | INFO     | transexitcode: 0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,432 | INFO     | exeerrorcode: 0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,432 | INFO     | exeerrordiag: 
[2024-06-22 14:56:05] 2024-06-22 12:55:45,432 | INFO     | exitcode: 0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,432 | INFO     | exitmsg: OK
[2024-06-22 14:56:05] 2024-06-22 12:55:45,432 | INFO     | cpuconsumptiontime: 76375 s
[2024-06-22 14:56:05] 2024-06-22 12:55:45,432 | INFO     | nevents: 400
[2024-06-22 14:56:05] 2024-06-22 12:55:45,432 | INFO     | neventsw: 0
[2024-06-22 14:56:05] 2024-06-22 12:55:45,433 | INFO     | pid: 4162888
[2024-06-22 14:56:05] 2024-06-22 12:55:45,433 | INFO     | pgrp: 4162888
[2024-06-22 14:56:05] 2024-06-22 12:55:45,433 | INFO     | corecount: 4
[2024-06-22 14:56:05] 2024-06-22 12:55:45,433 | INFO     | event service: False
[2024-06-22 14:56:05] 2024-06-22 12:55:45,433 | INFO     | sizes: {0: 2386910, 5: 2387116, 11: 2387172, 19909: 2420187, 19910: 2429225, 19916: 2429339}
[2024-06-22 14:56:05] 2024-06-22 12:55:45,433 | INFO     | --------------------------------------------------
[2024-06-22 14:56:05] 2024-06-22 12:55:45,433 | INFO     | 
[2024-06-22 14:56:05] 2024-06-22 12:55:45,433 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-06-22 14:56:05] 2024-06-22 12:55:45,450 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,451 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,451 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,451 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,453 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 14:56:05] 2024-06-22 12:55:45,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,453 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 14:56:05] 2024-06-22 12:55:45,453 | INFO     | job 6238832986 has completed (purged errors)
[2024-06-22 14:56:05] 2024-06-22 12:55:45,453 | INFO     | overall cleanup function is called
[2024-06-22 14:56:05] 2024-06-22 12:55:46,459 | INFO     | --- collectZombieJob: --- 10, [4162888]
[2024-06-22 14:56:05] 2024-06-22 12:55:46,459 | INFO     | zombie collector waiting for pid 4162888
[2024-06-22 14:56:05] 2024-06-22 12:55:46,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 14:56:05] 2024-06-22 12:55:47,464 | INFO     | collected zombie processes
[2024-06-22 14:56:05] 2024-06-22 12:55:47,464 | INFO     | will now attempt to kill all subprocesses of pid=4162888
[2024-06-22 14:56:05] 2024-06-22 12:55:47,554 | INFO     | process IDs to be killed: [4162888] (in reverse order)
[2024-06-22 14:56:05] 2024-06-22 12:55:47,637 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 14:56:05] 2024-06-22 12:55:47,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 14:56:05] 2024-06-22 12:55:47,641 | INFO     | did not find any defunct processes belonging to 4162888
[2024-06-22 14:56:05] 2024-06-22 12:55:47,644 | INFO     | did not find any defunct processes belonging to 4162888
[2024-06-22 14:56:05] 2024-06-22 12:55:47,644 | INFO     | ready for new job
[2024-06-22 14:56:05] 2024-06-22 12:55:47,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 14:56:05] 2024-06-22 12:55:47,646 | INFO     | *************************************
[2024-06-22 14:56:05] 2024-06-22 12:55:47,646 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 14:56:05] 2024-06-22 12:55:47,646 | INFO     | *************************************
[2024-06-22 14:56:05] 2024-06-22 12:55:47,646 | INFO     | 
[2024-06-22 14:56:05] 2024-06-22 12:55:47,648 | INFO     | architecture information:
[2024-06-22 14:56:05] 2024-06-22 12:55:47,648 | INFO     | executing command: cat /etc/os-release
[2024-06-22 14:56:05] 2024-06-22 12:55:47,659 | INFO     | cat /etc/os-release:
[2024-06-22 14:56:05] NAME="CentOS Linux"
[2024-06-22 14:56:05] VERSION="7 (Core)"
[2024-06-22 14:56:05] ID="centos"
[2024-06-22 14:56:05] ID_LIKE="rhel fedora"
[2024-06-22 14:56:05] VERSION_ID="7"
[2024-06-22 14:56:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 14:56:05] ANSI_COLOR="0;31"
[2024-06-22 14:56:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 14:56:05] HOME_URL="https://www.centos.org/"
[2024-06-22 14:56:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 14:56:05] 
[2024-06-22 14:56:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 14:56:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 14:56:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 14:56:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 14:56:05] 
[2024-06-22 14:56:05] 2024-06-22 12:55:47,660 | INFO     | *************************************
[2024-06-22 14:56:05] 2024-06-22 12:55:48,162 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-06-22 14:56:05] 2024-06-22 12:55:48,179 | INFO     | sufficient remaining disk space (1663683264512 B)
[2024-06-22 14:56:05] 2024-06-22 12:55:48,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 14:56:05] 2024-06-22 12:55:48,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 14:56:05] 2024-06-22 12:55:48,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 14:56:05] 2024-06-22 12:55:48,181 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 14:56:05] 2024-06-22 12:55:48,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 14:56:05] 2024-06-22 12:55:48,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 14:56:05] 2024-06-22 12:55:48,215 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 14:56:05] 2024-06-22 12:55:48,215 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 14:56:05] 2024-06-22 12:55:48,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 14:56:05] 2024-06-22 12:55:48,216 | INFO     | will abort loop
[2024-06-22 14:56:05] 2024-06-22 12:55:48,297 | INFO     | all payload control threads have been joined
[2024-06-22 14:56:05] 2024-06-22 12:55:48,756 | INFO     | all data control threads have been joined
[2024-06-22 14:56:05] 2024-06-22 12:55:49,070 | INFO     | all job control threads have been joined
[2024-06-22 14:56:05] 2024-06-22 12:55:49,185 | INFO     | [job] retrieve thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:49,220 | INFO     | [job] job monitor thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:49,303 | INFO     | [payload] control thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:49,319 | INFO     | [payload] validate_post thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:49,360 | INFO     | [job] validate thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:49,762 | INFO     | [data] control thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:49,858 | INFO     | [data] copytool_in thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:49,889 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:49,918 | INFO     | [payload] failed_post thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:50,073 | INFO     | [job] control thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:50,074 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:50,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 14:56:05] 2024-06-22 12:55:50,184 | INFO     | [data] copytool_out thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:50,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 14:56:05] 2024-06-22 12:55:50,649 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:51,446 | INFO     | [job] queue monitor thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:54,178 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:58,364 | INFO     | job.realtimelogging is not enabled
[2024-06-22 14:56:05] 2024-06-22 12:55:59,369 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 14:56:05] 2024-06-22 12:55:59,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47728220644416)>', '<ExcThread(monitor, started 47728421930752)>']
[2024-06-22 14:56:05] 2024-06-22 12:56:00,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 14:56:05] 2024-06-22 12:56:00,237 | INFO     | [monitor] control thread has ended
[2024-06-22 14:56:05] 2024-06-22 12:56:04,873 | INFO     | all workflow threads have been joined
[2024-06-22 14:56:05] 2024-06-22 12:56:04,873 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 14:56:05] 2024-06-22 12:56:04,874 | INFO     | traces error code: 0
[2024-06-22 14:56:05] 2024-06-22 12:56:04,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 14:56:05] 2024-06-22 12:56:04,947 [wrapper] ==== pilot stdout END ====
[2024-06-22 14:56:05] 2024-06-22 12:56:04,949 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 14:56:05] 2024-06-22 12:56:04,951 [wrapper] pilotpid: 4149210
[2024-06-22 14:56:05] 2024-06-22 12:56:04,952 [wrapper] Pilot exit status: 0
[2024-06-22 14:56:05] 2024-06-22 12:56:04,961 [wrapper] pandaids: 6238832986
[2024-06-22 14:56:05] 2024-06-22 12:56:04,997 [wrapper] cleanup supervisor_pilot  483518 4149211
[2024-06-22 14:56:05] 2024-06-22 12:56:04,999 [wrapper] Test setup, not cleaning
[2024-06-22 14:56:05] 2024-06-22 12:56:05,001 [wrapper] ==== wrapper stdout END ====
[2024-06-22 14:56:05] 2024-06-22 12:56:05,003 [wrapper] ==== wrapper stderr END ====
[2024-06-22 14:56:05] 2024-06-22 12:56:05,006 [wrapper] apfmon messages muted
[2024-06-22 14:56:05]  *** Error codes and diagnostics ***
[2024-06-22 14:56:05]     "exeErrorCode": 0,
[2024-06-22 14:56:05]     "exeErrorDiag": "",
[2024-06-22 14:56:05]     "pilotErrorCode": 0,
[2024-06-22 14:56:05]     "pilotErrorDiag": "",
[2024-06-22 14:56:05]  *** Listing of results directory ***
[2024-06-22 14:56:05] total 833100
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:13 pilot3.tar.gz
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:24 queuedata.json
[2024-06-22 14:56:05] -rwx------ 1 boinc boinc     32308 Jun 20 11:24 runpilot2-wrapper.sh
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc       100 Jun 22 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 14:56:05] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 09:23 run_atlas
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc       105 Jun 22 09:23 job.xml
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc      6455 Jun 22 09:23 init_data.xml
[2024-06-22 14:56:05] -rw-r--r-- 2 boinc boinc 592886437 Jun 22 09:23 EVNT.40024021._000032.pool.root.1
[2024-06-22 14:56:05] -rw-r--r-- 2 boinc boinc     17537 Jun 22 09:23 start_atlas.sh
[2024-06-22 14:56:05] drwxrwx--x 2 boinc boinc      4096 Jun 22 09:23 shared
[2024-06-22 14:56:05] -rw-r--r-- 2 boinc boinc    482476 Jun 22 09:23 input.tar.gz
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc         0 Jun 22 09:23 boinc_lockfile
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc      2515 Jun 22 09:23 pandaJob.out
[2024-06-22 14:56:05] -rw------- 1 boinc boinc       424 Jun 22 09:23 setup.sh.local
[2024-06-22 14:56:05] -rw------- 1 boinc boinc   1025953 Jun 22 09:23 agis_schedconf.cvmfs.json
[2024-06-22 14:56:05] -rw------- 1 boinc boinc   1321363 Jun 22 09:23 cric_ddmendpoints.json
[2024-06-22 14:56:05] drwx------ 4 boinc boinc      4096 Jun 22 09:23 pilot3
[2024-06-22 14:56:05] -rw------- 1 boinc boinc 251754925 Jun 22 14:55 HITS.40024023._000216.pool.root.1
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc       532 Jun 22 14:55 boinc_task_state.xml
[2024-06-22 14:56:05] -rw------- 1 boinc boinc      1046 Jun 22 14:55 memory_monitor_summary.json
[2024-06-22 14:56:05] -rw------- 1 boinc boinc         0 Jun 22 14:55 agis_ddmendpoints.agis.ALL.json
[2024-06-22 14:56:05] -rw------- 1 boinc boinc    400570 Jun 22 14:55 log.40024023._000216.job.log.tgz.1
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc      8192 Jun 22 14:55 boinc_mmap_file
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc        28 Jun 22 14:55 wrapper_checkpoint.txt
[2024-06-22 14:56:05] -rw------- 1 boinc boinc        95 Jun 22 14:55 pilot_heartbeat.json
[2024-06-22 14:56:05] -rw------- 1 boinc boinc      7759 Jun 22 14:55 heartbeat.json
[2024-06-22 14:56:05] -rw------- 1 boinc boinc      4480 Jun 22 14:56 pilotlog.txt
[2024-06-22 14:56:05] -rw------- 1 boinc boinc   2060193 Jun 22 14:56 log.40024023._000216.job.log.1
[2024-06-22 14:56:05] -rw------- 1 boinc boinc       357 Jun 22 14:56 output.list
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc       620 Jun 22 14:56 runtime_log
[2024-06-22 14:56:05] -rw------- 1 boinc boinc   2478080 Jun 22 14:56 result.tar.gz
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc     11410 Jun 22 14:56 runtime_log.err
[2024-06-22 14:56:05] -rw------- 1 boinc boinc       659 Jun 22 14:56 ABwKDm1CTe5n7Olcko1bjSoqABFKDmABFKDmOtvXDm7jqKDmOuFYOn.diag
[2024-06-22 14:56:05] -rw-r--r-- 1 boinc boinc     21290 Jun 22 14:56 stderr.txt
[2024-06-22 14:56:05] HITS file was successfully produced:
[2024-06-22 14:56:05] -rw------- 1 boinc boinc 251754925 Jun 22 14:55 shared/HITS.pool.root.1
[2024-06-22 14:56:05]  *** Contents of shared directory: ***
[2024-06-22 14:56:05] total 827768
[2024-06-22 14:56:05] -rw-r--r-- 2 boinc boinc 592886437 Jun 22 09:23 ATLAS.root_0
[2024-06-22 14:56:05] -rw-r--r-- 2 boinc boinc     17537 Jun 22 09:23 start_atlas.sh
[2024-06-22 14:56:05] -rw-r--r-- 2 boinc boinc    482476 Jun 22 09:23 input.tar.gz
[2024-06-22 14:56:05] -rw------- 1 boinc boinc 251754925 Jun 22 14:55 HITS.pool.root.1
[2024-06-22 14:56:05] -rw------- 1 boinc boinc   2478080 Jun 22 14:56 result.tar.gz
14:56:07 (4143393): run_atlas exited; CPU time 76168.029121
14:56:07 (4143393): called boinc_finish(0)

</stderr_txt>
]]>

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