Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:30:59 (2359606): wrapper (7.7.26015): starting
15:30:59 (2359606): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 15:30:59] Arguments: --nthreads 4
[2024-06-21 15:30:59] Threads: 4
[2024-06-21 15:30:59] Checking for CVMFS
[2024-06-21 15:30:59] No cvmfs_config command found, will try listing directly
[2024-06-21 15:30:59] CVMFS is ok
[2024-06-21 15:30:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 15:30:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 15:30:59] Further information can be found at the LHC@home message board.
[2024-06-21 15:30:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 15:30:59] Checking for apptainer binary...
[2024-06-21 15:30:59] which: no apptainer in ((null))
[2024-06-21 15:30:59] apptainer is not installed, using version from CVMFS
[2024-06-21 15:30:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 15:31:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-21 15:31:00] apptainer works
[2024-06-21 15:31:00] Set ATHENA_PROC_NUMBER=4
[2024-06-21 15:31:00] Set ATHENA_CORE_NUMBER=4
[2024-06-21 15:31:00] Starting ATLAS job with PandaID=6238832965
[2024-06-21 15:31:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 20:55:54]  *** The last 200 lines of the pilot log: ***
[2024-06-21 20:55:54] 2024-06-21 18:55:39,961 | WARNING  | GPU info not found in prmon json
[2024-06-21 20:55:54] 2024-06-21 18:55:39,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 20:55:54] 2024-06-21 18:55:39,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 20:55:54] 2024-06-21 18:55:39,966 | INFO     | fitting pss+swap vs Time
[2024-06-21 20:55:54] 2024-06-21 18:55:39,966 | INFO     | model: linear, x: [1718976705.0, 1718976766.0, 1718976827.0, 1718976888.0, 1718976949.0, 1718977010.0, 1718977071.0, 1718977132.0, 1718977193.0, 1718977254.0, 1718
[2024-06-21 20:55:54] 2024-06-21 18:55:39,966 | INFO     | sum of square deviations: 10065751520.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,968 | INFO     | sum of deviations: 73645785193.99998
[2024-06-21 20:55:54] 2024-06-21 18:55:39,968 | INFO     | mean x: 1718986404.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,968 | INFO     | mean y: 2349267.1128526647
[2024-06-21 20:55:54] 2024-06-21 18:55:39,969 | INFO     | -- intersect: -12574565949.684639
[2024-06-21 20:55:54] 2024-06-21 18:55:39,969 | INFO     | intersect: -12574565949.684639
[2024-06-21 20:55:54] 2024-06-21 18:55:39,969 | INFO     | chi2: 4.242870377459455
[2024-06-21 20:55:54] 2024-06-21 18:55:39,969 | INFO     | model: linear, x: [1718976705.0, 1718976766.0, 1718976827.0, 1718976888.0, 1718976949.0, 1718977010.0, 1718977071.0, 1718977132.0, 1718977193.0, 1718977254.0, 1718
[2024-06-21 20:55:54] 2024-06-21 18:55:39,969 | INFO     | sum of square deviations: 9599817202.5
[2024-06-21 20:55:54] 2024-06-21 18:55:39,971 | INFO     | sum of deviations: 92255067089.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,971 | INFO     | mean x: 1718986251.5
[2024-06-21 20:55:54] 2024-06-21 18:55:39,971 | INFO     | mean y: 2355274.949044586
[2024-06-21 20:55:54] 2024-06-21 18:55:39,972 | INFO     | -- intersect: -16517250110.443306
[2024-06-21 20:55:54] 2024-06-21 18:55:39,972 | INFO     | intersect: -16517250110.443306
[2024-06-21 20:55:54] 2024-06-21 18:55:39,972 | INFO     | chi2: 3.5016432081923625
[2024-06-21 20:55:54] 2024-06-21 18:55:39,972 | INFO     | current chi2=3.5016432081923625 (change=17.469946129038334 %)
[2024-06-21 20:55:54] 2024-06-21 18:55:39,972 | INFO     | right removable region: 313
[2024-06-21 20:55:54] 2024-06-21 18:55:39,972 | INFO     | model: linear, x: [1718977010.0, 1718977071.0, 1718977132.0, 1718977193.0, 1718977254.0, 1718977315.0, 1718977376.0, 1718977437.0, 1718977498.0, 1718977559.0, 1718
[2024-06-21 20:55:54] 2024-06-21 18:55:39,973 | INFO     | sum of square deviations: 9599817202.5
[2024-06-21 20:55:54] 2024-06-21 18:55:39,974 | INFO     | sum of deviations: 4842389565.499992
[2024-06-21 20:55:54] 2024-06-21 18:55:39,974 | INFO     | mean x: 1718986556.5
[2024-06-21 20:55:54] 2024-06-21 18:55:39,975 | INFO     | mean y: 2371734.6656050957
[2024-06-21 20:55:54] 2024-06-21 18:55:39,975 | INFO     | -- intersect: -864728376.6013691
[2024-06-21 20:55:54] 2024-06-21 18:55:39,975 | INFO     | intersect: -864728376.6013691
[2024-06-21 20:55:54] 2024-06-21 18:55:39,975 | INFO     | chi2: 2.114794106892697
[2024-06-21 20:55:54] 2024-06-21 18:55:39,975 | INFO     | current chi2=2.114794106892697 (change=50.15652332610281 %)
[2024-06-21 20:55:54] 2024-06-21 18:55:39,975 | INFO     | model: linear, x: [1718977315.0, 1718977376.0, 1718977437.0, 1718977498.0, 1718977559.0, 1718977620.0, 1718977681.0, 1718977742.0, 1718977803.0, 1718977864.0, 1718
[2024-06-21 20:55:54] 2024-06-21 18:55:39,976 | INFO     | sum of square deviations: 9148487810.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,977 | INFO     | sum of deviations: -47190710932.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,977 | INFO     | mean x: 1718986709.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,977 | INFO     | mean y: 2389316.142394822
[2024-06-21 20:55:54] 2024-06-21 18:55:39,977 | INFO     | -- intersect: 8869450907.643713
[2024-06-21 20:55:54] 2024-06-21 18:55:39,978 | INFO     | intersect: 8869450907.643713
[2024-06-21 20:55:54] 2024-06-21 18:55:39,978 | INFO     | chi2: 1.011728514180784
[2024-06-21 20:55:54] 2024-06-21 18:55:39,978 | INFO     | current chi2=1.011728514180784 (change=52.159479219122005 %)
[2024-06-21 20:55:54] 2024-06-21 18:55:39,978 | INFO     | model: linear, x: [1718977620.0, 1718977681.0, 1718977742.0, 1718977803.0, 1718977864.0, 1718977925.0, 1718977986.0, 1718978047.0, 1718978108.0, 1718978169.0, 1718
[2024-06-21 20:55:54] 2024-06-21 18:55:39,978 | INFO     | sum of square deviations: 8711530780.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,980 | INFO     | sum of deviations: -48530618296.5
[2024-06-21 20:55:54] 2024-06-21 18:55:39,980 | INFO     | mean x: 1718986861.5
[2024-06-21 20:55:54] 2024-06-21 18:55:39,980 | INFO     | mean y: 2389751.1809210526
[2024-06-21 20:55:54] 2024-06-21 18:55:39,980 | INFO     | -- intersect: 9578605153.378584
[2024-06-21 20:55:54] 2024-06-21 18:55:39,980 | INFO     | intersect: 9578605153.378584
[2024-06-21 20:55:54] 2024-06-21 18:55:39,981 | INFO     | chi2: 0.9645759541580157
[2024-06-21 20:55:54] 2024-06-21 18:55:39,981 | INFO     | current chi2=0.9645759541580157 (change=4.660594157608435 %)
[2024-06-21 20:55:54] 2024-06-21 18:55:39,981 | INFO     | left removable region: 30
[2024-06-21 20:55:54] 2024-06-21 18:55:39,981 | INFO     | model: linear, x: [1718978535.0, 1718978596.0, 1718978657.0, 1718978718.0, 1718978779.0, 1718978840.0, 1718978901.0, 1718978962.0, 1718979023.0, 1718979084.0, 1718
[2024-06-21 20:55:54] 2024-06-21 18:55:39,981 | INFO     | sum of square deviations: 7028008982.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,983 | INFO     | sum of deviations: 1639035900.9999993
[2024-06-21 20:55:54] 2024-06-21 18:55:39,983 | INFO     | mean x: 1718987136.0
[2024-06-21 20:55:54] 2024-06-21 18:55:39,983 | INFO     | mean y: 2384888.699646643
[2024-06-21 20:55:54] 2024-06-21 18:55:39,983 | INFO     | -- intersect: -398508399.35352
[2024-06-21 20:55:54] 2024-06-21 18:55:39,983 | INFO     | intersect: -398508399.35352
[2024-06-21 20:55:54] 2024-06-21 18:55:39,983 | INFO     | chi2: 0.07936400421876828
[2024-06-21 20:55:54] 2024-06-21 18:55:39,983 | INFO     | -- intersect: -398508399.35352
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | current memory leak: 0.23 B/s (using 283 data points, chi2=0.08)
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | ..............................
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | . Timing measurements:
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | . get job = 0 s
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | . initial setup = 1 s
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | . payload setup = 7 s
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | . stage-in = 0 s
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | . payload execution = 19426 s
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | . stage-out = 0 s
[2024-06-21 20:55:54] 2024-06-21 18:55:39,984 | INFO     | . log creation = 0 s
[2024-06-21 20:55:54] 2024-06-21 18:55:39,985 | INFO     | ..............................
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | 
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | job summary report
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | --------------------------------------------------
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | PanDA job id: 6238832965
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | task id: 40024023
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | errors: (none)
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | pilot state: finished 
[2024-06-21 20:55:54] 2024-06-21 18:55:40,050 | INFO     | transexitcode: 0
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | exeerrorcode: 0
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | exeerrordiag: 
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | exitcode: 0
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | exitmsg: OK
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | cpuconsumptiontime: 74327 s
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | nevents: 400
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | neventsw: 0
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | pid: 2373392
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | pgrp: 2373392
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | corecount: 4
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | event service: False
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | sizes: {0: 2386839, 5: 2387045, 11: 2387101, 19437: 2420120, 19438: 2429102, 19441: 2429158, 19448: 2429456}
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | --------------------------------------------------
[2024-06-21 20:55:54] 2024-06-21 18:55:40,051 | INFO     | 
[2024-06-21 20:55:54] 2024-06-21 18:55:40,052 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2024-06-21 20:55:54] 2024-06-21 18:55:40,069 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | job 6238832965 has completed (purged errors)
[2024-06-21 20:55:54] 2024-06-21 18:55:40,071 | INFO     | overall cleanup function is called
[2024-06-21 20:55:54] 2024-06-21 18:55:41,078 | INFO     | --- collectZombieJob: --- 10, [2373392]
[2024-06-21 20:55:54] 2024-06-21 18:55:41,078 | INFO     | zombie collector waiting for pid 2373392
[2024-06-21 20:55:54] 2024-06-21 18:55:41,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 20:55:54] 2024-06-21 18:55:42,083 | INFO     | collected zombie processes
[2024-06-21 20:55:54] 2024-06-21 18:55:42,083 | INFO     | will now attempt to kill all subprocesses of pid=2373392
[2024-06-21 20:55:54] 2024-06-21 18:55:42,203 | INFO     | process IDs to be killed: [2373392] (in reverse order)
[2024-06-21 20:55:54] 2024-06-21 18:55:42,298 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 20:55:54] 2024-06-21 18:55:42,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 20:55:54] 2024-06-21 18:55:42,303 | INFO     | did not find any defunct processes belonging to 2373392
[2024-06-21 20:55:54] 2024-06-21 18:55:42,306 | INFO     | did not find any defunct processes belonging to 2373392
[2024-06-21 20:55:54] 2024-06-21 18:55:42,307 | INFO     | ready for new job
[2024-06-21 20:55:54] 2024-06-21 18:55:42,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 20:55:54] 2024-06-21 18:55:42,308 | INFO     | *************************************
[2024-06-21 20:55:54] 2024-06-21 18:55:42,309 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 20:55:54] 2024-06-21 18:55:42,309 | INFO     | *************************************
[2024-06-21 20:55:54] 2024-06-21 18:55:42,309 | INFO     | 
[2024-06-21 20:55:54] 2024-06-21 18:55:42,310 | INFO     | architecture information:
[2024-06-21 20:55:54] 2024-06-21 18:55:42,310 | INFO     | executing command: cat /etc/os-release
[2024-06-21 20:55:54] 2024-06-21 18:55:42,328 | INFO     | cat /etc/os-release:
[2024-06-21 20:55:54] NAME="CentOS Linux"
[2024-06-21 20:55:54] VERSION="7 (Core)"
[2024-06-21 20:55:54] ID="centos"
[2024-06-21 20:55:54] ID_LIKE="rhel fedora"
[2024-06-21 20:55:54] VERSION_ID="7"
[2024-06-21 20:55:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 20:55:54] ANSI_COLOR="0;31"
[2024-06-21 20:55:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 20:55:54] HOME_URL="https://www.centos.org/"
[2024-06-21 20:55:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 20:55:54] 
[2024-06-21 20:55:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 20:55:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 20:55:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 20:55:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 20:55:54] 
[2024-06-21 20:55:54] 2024-06-21 18:55:42,329 | INFO     | *************************************
[2024-06-21 20:55:54] 2024-06-21 18:55:42,831 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2024-06-21 20:55:54] 2024-06-21 18:55:42,849 | INFO     | sufficient remaining disk space (1664421462016 B)
[2024-06-21 20:55:54] 2024-06-21 18:55:42,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 20:55:54] 2024-06-21 18:55:42,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 20:55:54] 2024-06-21 18:55:42,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 20:55:54] 2024-06-21 18:55:43,069 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 20:55:54] 2024-06-21 18:55:43,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 20:55:54] 2024-06-21 18:55:43,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 20:55:54] 2024-06-21 18:55:43,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 20:55:54] 2024-06-21 18:55:43,274 | INFO     | all data control threads have been joined
[2024-06-21 20:55:54] 2024-06-21 18:55:43,760 | INFO     | all job control threads have been joined
[2024-06-21 20:55:54] 2024-06-21 18:55:43,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 20:55:54] 2024-06-21 18:55:43,769 | INFO     | aborting loop
[2024-06-21 20:55:54] 2024-06-21 18:55:43,854 | INFO     | [job] retrieve thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:43,879 | INFO     | [payload] validate_post thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,081 | INFO     | [data] copytool_in thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,211 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,279 | INFO     | [data] control thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,288 | INFO     | all payload control threads have been joined
[2024-06-21 20:55:54] 2024-06-21 18:55:44,346 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,513 | INFO     | [payload] failed_post thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,740 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,764 | INFO     | [job] control thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,774 | INFO     | [job] job monitor thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,855 | INFO     | [data] copytool_out thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:44,957 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:45,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 20:55:54] 2024-06-21 18:55:45,082 | INFO     | [job] validate thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:45,292 | INFO     | [payload] control thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:46,064 | INFO     | [job] queue monitor thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:47,111 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 20:55:54] 2024-06-21 18:55:48,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47675887862848)>', '<ExcThread(monitor, started 47676072339200)>']
[2024-06-21 20:55:54] 2024-06-21 18:55:49,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 20:55:54] 2024-06-21 18:55:49,099 | INFO     | [monitor] control thread has ended
[2024-06-21 20:55:54] 2024-06-21 18:55:53,288 | INFO     | all workflow threads have been joined
[2024-06-21 20:55:54] 2024-06-21 18:55:53,288 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 20:55:54] 2024-06-21 18:55:53,289 | INFO     | traces error code: 0
[2024-06-21 20:55:54] 2024-06-21 18:55:53,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 20:55:54] 2024-06-21 18:55:53,382 [wrapper] ==== pilot stdout END ====
[2024-06-21 20:55:54] 2024-06-21 18:55:53,384 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 20:55:54] 2024-06-21 18:55:53,386 [wrapper] pilotpid: 2363848
[2024-06-21 20:55:54] 2024-06-21 18:55:53,388 [wrapper] Pilot exit status: 0
[2024-06-21 20:55:54] 2024-06-21 18:55:53,397 [wrapper] pandaids: 6238832965
[2024-06-21 20:55:54] 2024-06-21 18:55:53,451 [wrapper] cleanup supervisor_pilot 2889698 2363849
[2024-06-21 20:55:54] 2024-06-21 18:55:53,453 [wrapper] Test setup, not cleaning
[2024-06-21 20:55:54] 2024-06-21 18:55:53,455 [wrapper] ==== wrapper stdout END ====
[2024-06-21 20:55:54] 2024-06-21 18:55:53,456 [wrapper] ==== wrapper stderr END ====
[2024-06-21 20:55:54] 2024-06-21 18:55:53,461 [wrapper] apfmon messages muted
[2024-06-21 20:55:54]  *** Error codes and diagnostics ***
[2024-06-21 20:55:54]     "exeErrorCode": 0,
[2024-06-21 20:55:54]     "exeErrorDiag": "",
[2024-06-21 20:55:54]     "pilotErrorCode": 0,
[2024-06-21 20:55:54]     "pilotErrorDiag": "",
[2024-06-21 20:55:54]  *** Listing of results directory ***
[2024-06-21 20:55:54] total 848364
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:13 pilot3.tar.gz
[2024-06-21 20:55:54] -rwx------ 1 boinc boinc     32308 Jun 20 11:18 runpilot2-wrapper.sh
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:18 queuedata.json
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc       100 Jun 21 15:30 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 20:55:54] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 15:30 run_atlas
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc       105 Jun 21 15:30 job.xml
[2024-06-21 20:55:54] -rw-r--r-- 2 boinc boinc 598447709 Jun 21 15:30 EVNT.40024021._000031.pool.root.1
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc      6455 Jun 21 15:30 init_data.xml
[2024-06-21 20:55:54] -rw-r--r-- 2 boinc boinc     17537 Jun 21 15:30 start_atlas.sh
[2024-06-21 20:55:54] drwxrwx--x 2 boinc boinc      4096 Jun 21 15:30 shared
[2024-06-21 20:55:54] -rw-r--r-- 2 boinc boinc    482480 Jun 21 15:30 input.tar.gz
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc         0 Jun 21 15:30 boinc_lockfile
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc      2514 Jun 21 15:31 pandaJob.out
[2024-06-21 20:55:54] -rw------- 1 boinc boinc       424 Jun 21 15:31 setup.sh.local
[2024-06-21 20:55:54] -rw------- 1 boinc boinc   1023013 Jun 21 15:31 agis_schedconf.cvmfs.json
[2024-06-21 20:55:54] -rw------- 1 boinc boinc   1321251 Jun 21 15:31 cric_ddmendpoints.json
[2024-06-21 20:55:54] drwx------ 4 boinc boinc      4096 Jun 21 15:31 pilot3
[2024-06-21 20:55:54] -rw------- 1 boinc boinc 261966315 Jun 21 20:54 HITS.40024023._000195.pool.root.1
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc       532 Jun 21 20:54 boinc_task_state.xml
[2024-06-21 20:55:54] -rw------- 1 boinc boinc        95 Jun 21 20:55 pilot_heartbeat.json
[2024-06-21 20:55:54] -rw------- 1 boinc boinc      1059 Jun 21 20:55 memory_monitor_summary.json
[2024-06-21 20:55:54] -rw------- 1 boinc boinc         0 Jun 21 20:55 agis_ddmendpoints.agis.ALL.json
[2024-06-21 20:55:54] -rw------- 1 boinc boinc    400073 Jun 21 20:55 log.40024023._000195.job.log.tgz.1
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc      8192 Jun 21 20:55 boinc_mmap_file
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc        28 Jun 21 20:55 wrapper_checkpoint.txt
[2024-06-21 20:55:54] -rw------- 1 boinc boinc      7761 Jun 21 20:55 heartbeat.json
[2024-06-21 20:55:54] -rw------- 1 boinc boinc      4222 Jun 21 20:55 pilotlog.txt
[2024-06-21 20:55:54] -rw------- 1 boinc boinc   1988669 Jun 21 20:55 log.40024023._000195.job.log.1
[2024-06-21 20:55:54] -rw------- 1 boinc boinc       357 Jun 21 20:55 output.list
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc       620 Jun 21 20:55 runtime_log
[2024-06-21 20:55:54] -rw------- 1 boinc boinc   2406400 Jun 21 20:55 result.tar.gz
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc     11410 Jun 21 20:55 runtime_log.err
[2024-06-21 20:55:54] -rw------- 1 boinc boinc       659 Jun 21 20:55 0LQLDmt6Se5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm02kKDmf1XqFn.diag
[2024-06-21 20:55:54] -rw-r--r-- 1 boinc boinc     21257 Jun 21 20:55 stderr.txt
[2024-06-21 20:55:54] HITS file was successfully produced:
[2024-06-21 20:55:54] -rw------- 1 boinc boinc 261966315 Jun 21 20:54 shared/HITS.pool.root.1
[2024-06-21 20:55:54]  *** Contents of shared directory: ***
[2024-06-21 20:55:54] total 843104
[2024-06-21 20:55:54] -rw-r--r-- 2 boinc boinc 598447709 Jun 21 15:30 ATLAS.root_0
[2024-06-21 20:55:54] -rw-r--r-- 2 boinc boinc     17537 Jun 21 15:30 start_atlas.sh
[2024-06-21 20:55:54] -rw-r--r-- 2 boinc boinc    482480 Jun 21 15:30 input.tar.gz
[2024-06-21 20:55:54] -rw------- 1 boinc boinc 261966315 Jun 21 20:54 HITS.pool.root.1
[2024-06-21 20:55:54] -rw------- 1 boinc boinc   2406400 Jun 21 20:55 result.tar.gz
20:55:55 (2359606): run_atlas exited; CPU time 74117.954061
20:55:55 (2359606): called boinc_finish(0)

</stderr_txt>
]]>

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