Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:51:07 (1311214): wrapper (7.7.26015): starting
07:51:07 (1311214): wrapper: running run_atlas (--nthreads 4)
[2024-06-23 07:51:07] Arguments: --nthreads 4
[2024-06-23 07:51:07] Threads: 4
[2024-06-23 07:51:07] Checking for CVMFS
[2024-06-23 07:51:07] No cvmfs_config command found, will try listing directly
[2024-06-23 07:51:07] CVMFS is ok
[2024-06-23 07:51:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 07:51:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 07:51:07] Further information can be found at the LHC@home message board.
[2024-06-23 07:51:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 07:51:07] Checking for apptainer binary...
[2024-06-23 07:51:07] which: no apptainer in ((null))
[2024-06-23 07:51:07] apptainer is not installed, using version from CVMFS
[2024-06-23 07:51:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 07:51:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2024-06-23 07:51:08] apptainer works
[2024-06-23 07:51:08] Set ATHENA_PROC_NUMBER=4
[2024-06-23 07:51:08] Set ATHENA_CORE_NUMBER=4
[2024-06-23 07:51:08] Starting ATLAS job with PandaID=6238832912
[2024-06-23 07:51:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 13:17:38]  *** The last 200 lines of the pilot log: ***
[2024-06-23 13:17:38] 2024-06-23 11:17:21,658 | INFO     | intersect: -3528800408.8729477
[2024-06-23 13:17:38] 2024-06-23 11:17:21,659 | INFO     | chi2: 0.057460916647354254
[2024-06-23 13:17:38] 2024-06-23 11:17:21,659 | INFO     | current chi2=0.057460916647354254 (change=94.64770937919467 %)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,659 | INFO     | model: linear, x: [1719122832.0, 1719122893.0, 1719122954.0, 1719123015.0, 1719123076.0, 1719123137.0, 1719123198.0, 1719123259.0, 1719123320.0, 1719123381.0, 1719
[2024-06-23 13:17:38] 2024-06-23 11:17:21,659 | INFO     | sum of square deviations: 8797783560.0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,661 | INFO     | sum of deviations: 18082705860.999996
[2024-06-23 13:17:38] 2024-06-23 11:17:21,661 | INFO     | mean x: 1719132104.0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,661 | INFO     | mean y: 2371482.550819672
[2024-06-23 13:17:38] 2024-06-23 11:17:21,661 | INFO     | -- intersect: -3531082137.9919953
[2024-06-23 13:17:38] 2024-06-23 11:17:21,661 | INFO     | intersect: -3531082137.9919953
[2024-06-23 13:17:38] 2024-06-23 11:17:21,661 | INFO     | chi2: 0.014187415312858765
[2024-06-23 13:17:38] 2024-06-23 11:17:21,661 | INFO     | current chi2=0.014187415312858765 (change=75.30945181412798 %)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,662 | INFO     | model: linear, x: [1719123137.0, 1719123198.0, 1719123259.0, 1719123320.0, 1719123381.0, 1719123442.0, 1719123503.0, 1719123564.0, 1719123625.0, 1719123686.0, 1719
[2024-06-23 13:17:38] 2024-06-23 11:17:21,662 | INFO     | sum of square deviations: 8372156975.0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,663 | INFO     | sum of deviations: 17081394856.5
[2024-06-23 13:17:38] 2024-06-23 11:17:21,663 | INFO     | mean x: 1719132256.5
[2024-06-23 13:17:38] 2024-06-23 11:17:21,663 | INFO     | mean y: 2371852.6366666667
[2024-06-23 13:17:38] 2024-06-23 11:17:21,663 | INFO     | -- intersect: -3505108593.7416496
[2024-06-23 13:17:38] 2024-06-23 11:17:21,664 | INFO     | intersect: -3505108593.7416496
[2024-06-23 13:17:38] 2024-06-23 11:17:21,664 | INFO     | chi2: 0.0027440181081352247
[2024-06-23 13:17:38] 2024-06-23 11:17:21,664 | INFO     | current chi2=0.0027440181081352247 (change=80.65878775221177 %)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,664 | INFO     | model: linear, x: [1719123442.0, 1719123503.0, 1719123564.0, 1719123625.0, 1719123686.0, 1719123747.0, 1719123808.0, 1719123869.0, 1719123930.0, 1719123991.0, 1719
[2024-06-23 13:17:38] 2024-06-23 11:17:21,664 | INFO     | sum of square deviations: 7960484140.0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,666 | INFO     | sum of deviations: 14413974138.000002
[2024-06-23 13:17:38] 2024-06-23 11:17:21,666 | INFO     | mean x: 1719132409.0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,666 | INFO     | mean y: 2372839.786440678
[2024-06-23 13:17:38] 2024-06-23 11:17:21,666 | INFO     | -- intersect: -3110444125.5298977
[2024-06-23 13:17:38] 2024-06-23 11:17:21,666 | INFO     | intersect: -3110444125.5298977
[2024-06-23 13:17:38] 2024-06-23 11:17:21,666 | INFO     | chi2: 0.0011692283698869791
[2024-06-23 13:17:38] 2024-06-23 11:17:21,666 | INFO     | current chi2=0.0011692283698869791 (change=57.3899178573001 %)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,667 | INFO     | model: linear, x: [1719123747.0, 1719123808.0, 1719123869.0, 1719123930.0, 1719123991.0, 1719124052.0, 1719124113.0, 1719124174.0, 1719124235.0, 1719124296.0, 1719
[2024-06-23 13:17:38] 2024-06-23 11:17:21,667 | INFO     | sum of square deviations: 7562532492.5
[2024-06-23 13:17:38] 2024-06-23 11:17:21,668 | INFO     | sum of deviations: 12736052749.999996
[2024-06-23 13:17:38] 2024-06-23 11:17:21,668 | INFO     | mean x: 1719132561.5
[2024-06-23 13:17:38] 2024-06-23 11:17:21,668 | INFO     | mean y: 2373482.1172413793
[2024-06-23 13:17:38] 2024-06-23 11:17:21,668 | INFO     | -- intersect: -2892815795.9745264
[2024-06-23 13:17:38] 2024-06-23 11:17:21,668 | INFO     | intersect: -2892815795.9745264
[2024-06-23 13:17:38] 2024-06-23 11:17:21,669 | INFO     | chi2: 0.0007152031545076685
[2024-06-23 13:17:38] 2024-06-23 11:17:21,669 | INFO     | current chi2=0.0007152031545076685 (change=38.83118363123519 %)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,669 | INFO     | model: linear, x: [1719124052.0, 1719124113.0, 1719124174.0, 1719124235.0, 1719124296.0, 1719124357.0, 1719124418.0, 1719124479.0, 1719124540.0, 1719124601.0, 1719
[2024-06-23 13:17:38] 2024-06-23 11:17:21,669 | INFO     | sum of square deviations: 7178069470.0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,671 | INFO     | sum of deviations: 11523465286.999994
[2024-06-23 13:17:38] 2024-06-23 11:17:21,671 | INFO     | mean x: 1719132714.0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,671 | INFO     | mean y: 2373962.7087719296
[2024-06-23 13:17:38] 2024-06-23 11:17:21,671 | INFO     | -- intersect: -2757472014.8650684
[2024-06-23 13:17:38] 2024-06-23 11:17:21,671 | INFO     | intersect: -2757472014.8650684
[2024-06-23 13:17:38] 2024-06-23 11:17:21,671 | INFO     | chi2: 0.0005519949190750192
[2024-06-23 13:17:38] 2024-06-23 11:17:21,671 | INFO     | current chi2=0.0005519949190750192 (change=22.81984278229289 %)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,671 | INFO     | left removable region: 70
[2024-06-23 13:17:38] 2024-06-23 11:17:21,672 | INFO     | model: linear, x: [1719126187.0, 1719126248.0, 1719126309.0, 1719126370.0, 1719126431.0, 1719126492.0, 1719126553.0, 1719126614.0, 1719126675.0, 1719126736.0, 1719
[2024-06-23 13:17:38] 2024-06-23 11:17:21,672 | INFO     | sum of square deviations: 4504437945.0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,673 | INFO     | sum of deviations: 7457792778.000006
[2024-06-23 13:17:38] 2024-06-23 11:17:21,673 | INFO     | mean x: 1719133598.5
[2024-06-23 13:17:38] 2024-06-23 11:17:21,673 | INFO     | mean y: 2375532.3278688523
[2024-06-23 13:17:38] 2024-06-23 11:17:21,673 | INFO     | -- intersect: -2843915679.107715
[2024-06-23 13:17:38] 2024-06-23 11:17:21,673 | INFO     | intersect: -2843915679.107715
[2024-06-23 13:17:38] 2024-06-23 11:17:21,673 | INFO     | chi2: 0.0004984379949559028
[2024-06-23 13:17:38] 2024-06-23 11:17:21,673 | INFO     | -- intersect: -2843915679.107715
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | current memory leak: 1.66 B/s (using 244 data points, chi2=0.00)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | ..............................
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | . Timing measurements:
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | . get job = 0 s
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | . initial setup = 1 s
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | . payload setup = 9 s
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | . stage-in = 0 s
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | . payload execution = 19515 s
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | . stage-out = 1 s
[2024-06-23 13:17:38] 2024-06-23 11:17:21,674 | INFO     | . log creation = 0 s
[2024-06-23 13:17:38] 2024-06-23 11:17:21,675 | INFO     | ..............................
[2024-06-23 13:17:38] 2024-06-23 11:17:21,749 | INFO     | 
[2024-06-23 13:17:38] 2024-06-23 11:17:21,749 | INFO     | job summary report
[2024-06-23 13:17:38] 2024-06-23 11:17:21,750 | INFO     | --------------------------------------------------
[2024-06-23 13:17:38] 2024-06-23 11:17:21,750 | INFO     | PanDA job id: 6238832912
[2024-06-23 13:17:38] 2024-06-23 11:17:21,750 | INFO     | task id: 40024023
[2024-06-23 13:17:38] 2024-06-23 11:17:21,750 | INFO     | errors: (none)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,750 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 13:17:38] 2024-06-23 11:17:21,750 | INFO     | pilot state: finished 
[2024-06-23 13:17:38] 2024-06-23 11:17:21,750 | INFO     | transexitcode: 0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,750 | INFO     | exeerrorcode: 0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | exeerrordiag: 
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | exitcode: 0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | exitmsg: OK
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | cpuconsumptiontime: 74459 s
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | nevents: 400
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | neventsw: 0
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | pid: 1322358
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | pgrp: 1322358
[2024-06-23 13:17:38] 2024-06-23 11:17:21,751 | INFO     | corecount: 4
[2024-06-23 13:17:38] 2024-06-23 11:17:21,752 | INFO     | event service: False
[2024-06-23 13:17:38] 2024-06-23 11:17:21,752 | INFO     | sizes: {0: 2385399, 1: 2386946, 10: 2387152, 12: 2387180, 19528: 2420051, 19530: 2429033, 19531: 2429217, 19541: 2429387}
[2024-06-23 13:17:38] 2024-06-23 11:17:21,752 | INFO     | --------------------------------------------------
[2024-06-23 13:17:38] 2024-06-23 11:17:21,752 | INFO     | 
[2024-06-23 13:17:38] 2024-06-23 11:17:21,752 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-23 13:17:38] 2024-06-23 11:17:21,772 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,773 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,773 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,773 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,775 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,775 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 13:17:38] 2024-06-23 11:17:21,775 | INFO     | job 6238832912 has completed (purged errors)
[2024-06-23 13:17:38] 2024-06-23 11:17:21,775 | INFO     | overall cleanup function is called
[2024-06-23 13:17:38] 2024-06-23 11:17:22,782 | INFO     | --- collectZombieJob: --- 10, [1322358]
[2024-06-23 13:17:38] 2024-06-23 11:17:22,783 | INFO     | zombie collector waiting for pid 1322358
[2024-06-23 13:17:38] 2024-06-23 11:17:22,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 13:17:38] 2024-06-23 11:17:23,787 | INFO     | collected zombie processes
[2024-06-23 13:17:38] 2024-06-23 11:17:23,788 | INFO     | will now attempt to kill all subprocesses of pid=1322358
[2024-06-23 13:17:38] 2024-06-23 11:17:23,926 | INFO     | process IDs to be killed: [1322358] (in reverse order)
[2024-06-23 13:17:38] 2024-06-23 11:17:24,017 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 13:17:38] 2024-06-23 11:17:24,018 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 13:17:38] 2024-06-23 11:17:24,023 | INFO     | did not find any defunct processes belonging to 1322358
[2024-06-23 13:17:38] 2024-06-23 11:17:24,029 | INFO     | did not find any defunct processes belonging to 1322358
[2024-06-23 13:17:38] 2024-06-23 11:17:24,029 | INFO     | ready for new job
[2024-06-23 13:17:38] 2024-06-23 11:17:24,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 13:17:38] 2024-06-23 11:17:24,033 | INFO     | *************************************
[2024-06-23 13:17:38] 2024-06-23 11:17:24,033 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 13:17:38] 2024-06-23 11:17:24,033 | INFO     | *************************************
[2024-06-23 13:17:38] 2024-06-23 11:17:24,033 | INFO     | 
[2024-06-23 13:17:38] 2024-06-23 11:17:24,035 | INFO     | architecture information:
[2024-06-23 13:17:38] 2024-06-23 11:17:24,036 | INFO     | executing command: cat /etc/os-release
[2024-06-23 13:17:38] 2024-06-23 11:17:24,050 | INFO     | cat /etc/os-release:
[2024-06-23 13:17:38] NAME="CentOS Linux"
[2024-06-23 13:17:38] VERSION="7 (Core)"
[2024-06-23 13:17:38] ID="centos"
[2024-06-23 13:17:38] ID_LIKE="rhel fedora"
[2024-06-23 13:17:38] VERSION_ID="7"
[2024-06-23 13:17:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 13:17:38] ANSI_COLOR="0;31"
[2024-06-23 13:17:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 13:17:38] HOME_URL="https://www.centos.org/"
[2024-06-23 13:17:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 13:17:38] 
[2024-06-23 13:17:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 13:17:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 13:17:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 13:17:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 13:17:38] 
[2024-06-23 13:17:38] 2024-06-23 11:17:24,050 | INFO     | *************************************
[2024-06-23 13:17:38] 2024-06-23 11:17:24,553 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-23 13:17:38] 2024-06-23 11:17:24,569 | INFO     | sufficient remaining disk space (1669753470976 B)
[2024-06-23 13:17:38] 2024-06-23 11:17:24,569 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 13:17:38] 2024-06-23 11:17:24,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 13:17:38] 2024-06-23 11:17:24,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 13:17:38] 2024-06-23 11:17:24,570 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 13:17:38] 2024-06-23 11:17:24,570 | INFO     | aborting loop
[2024-06-23 13:17:38] 2024-06-23 11:17:24,571 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 13:17:38] 2024-06-23 11:17:24,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 13:17:38] 2024-06-23 11:17:24,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 13:17:38] 2024-06-23 11:17:24,939 | INFO     | all job control threads have been joined
[2024-06-23 13:17:38] 2024-06-23 11:17:24,996 | INFO     | all data control threads have been joined
[2024-06-23 13:17:38] 2024-06-23 11:17:25,055 | INFO     | all payload control threads have been joined
[2024-06-23 13:17:38] 2024-06-23 11:17:25,578 | INFO     | [job] retrieve thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:25,578 | INFO     | [job] job monitor thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:25,677 | INFO     | [payload] validate_post thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:25,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 13:17:38] 2024-06-23 11:17:25,944 | INFO     | [job] control thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,002 | INFO     | [data] control thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,061 | INFO     | [payload] control thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,096 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,102 | INFO     | [data] copytool_in thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,230 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,293 | INFO     | [job] validate thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,740 | INFO     | [payload] failed_post thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 13:17:38] 2024-06-23 11:17:26,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 13:17:38] 2024-06-23 11:17:26,892 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:26,945 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:27,763 | INFO     | [job] queue monitor thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:27,884 | INFO     | [data] copytool_out thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:30,845 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 13:17:38] 2024-06-23 11:17:32,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47623172334656)>', '<ExcThread(monitor, started 47623363114752)>']
[2024-06-23 13:17:38] 2024-06-23 11:17:32,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 13:17:38] 2024-06-23 11:17:32,613 | INFO     | [monitor] control thread has ended
[2024-06-23 13:17:38] 2024-06-23 11:17:37,139 | INFO     | all workflow threads have been joined
[2024-06-23 13:17:38] 2024-06-23 11:17:37,140 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 13:17:38] 2024-06-23 11:17:37,140 | INFO     | traces error code: 0
[2024-06-23 13:17:38] 2024-06-23 11:17:37,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 13:17:38] 2024-06-23 11:17:37,263 [wrapper] ==== pilot stdout END ====
[2024-06-23 13:17:38] 2024-06-23 11:17:37,265 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 13:17:38] 2024-06-23 11:17:37,267 [wrapper] pilotpid: 1315432
[2024-06-23 13:17:38] 2024-06-23 11:17:37,269 [wrapper] Pilot exit status: 0
[2024-06-23 13:17:38] 2024-06-23 11:17:37,341 [wrapper] pandaids: 6238832912
[2024-06-23 13:17:38] 2024-06-23 11:17:37,437 [wrapper] cleanup supervisor_pilot 1738221 1315433
[2024-06-23 13:17:38] 2024-06-23 11:17:37,439 [wrapper] Test setup, not cleaning
[2024-06-23 13:17:38] 2024-06-23 11:17:37,441 [wrapper] ==== wrapper stdout END ====
[2024-06-23 13:17:38] 2024-06-23 11:17:37,446 [wrapper] ==== wrapper stderr END ====
[2024-06-23 13:17:38] 2024-06-23 11:17:37,456 [wrapper] apfmon messages muted
[2024-06-23 13:17:38]  *** Error codes and diagnostics ***
[2024-06-23 13:17:38]     "exeErrorCode": 0,
[2024-06-23 13:17:38]     "exeErrorDiag": "",
[2024-06-23 13:17:38]     "pilotErrorCode": 0,
[2024-06-23 13:17:38]     "pilotErrorDiag": "",
[2024-06-23 13:17:38]  *** Listing of results directory ***
[2024-06-23 13:17:38] total 842764
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:08 pilot3.tar.gz
[2024-06-23 13:17:38] -rwx------ 1 boinc boinc     32308 Jun 20 11:11 runpilot2-wrapper.sh
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:11 queuedata.json
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc       100 Jun 23 07:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 13:17:38] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 07:50 run_atlas
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc       105 Jun 23 07:50 job.xml
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc      6455 Jun 23 07:51 init_data.xml
[2024-06-23 13:17:38] -rw-r--r-- 2 boinc boinc 596010055 Jun 23 07:51 EVNT.40024021._000006.pool.root.1
[2024-06-23 13:17:38] -rw-r--r-- 2 boinc boinc     17537 Jun 23 07:51 start_atlas.sh
[2024-06-23 13:17:38] drwxrwx--x 2 boinc boinc      4096 Jun 23 07:51 shared
[2024-06-23 13:17:38] -rw-r--r-- 2 boinc boinc    482483 Jun 23 07:51 input.tar.gz
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc         0 Jun 23 07:51 boinc_lockfile
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc      2523 Jun 23 07:51 pandaJob.out
[2024-06-23 13:17:38] -rw------- 1 boinc boinc       424 Jun 23 07:51 setup.sh.local
[2024-06-23 13:17:38] -rw------- 1 boinc boinc   1025270 Jun 23 07:51 agis_schedconf.cvmfs.json
[2024-06-23 13:17:38] -rw------- 1 boinc boinc   1321363 Jun 23 07:51 cric_ddmendpoints.json
[2024-06-23 13:17:38] drwx------ 4 boinc boinc      4096 Jun 23 07:51 pilot3
[2024-06-23 13:17:38] -rw------- 1 boinc boinc 258254842 Jun 23 13:16 HITS.40024023._000142.pool.root.1
[2024-06-23 13:17:38] -rw------- 1 boinc boinc        95 Jun 23 13:16 pilot_heartbeat.json
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc       532 Jun 23 13:17 boinc_task_state.xml
[2024-06-23 13:17:38] -rw------- 1 boinc boinc      1039 Jun 23 13:17 memory_monitor_summary.json
[2024-06-23 13:17:38] -rw------- 1 boinc boinc         0 Jun 23 13:17 agis_ddmendpoints.agis.ALL.json
[2024-06-23 13:17:38] -rw------- 1 boinc boinc    404658 Jun 23 13:17 log.40024023._000142.job.log.tgz.1
[2024-06-23 13:17:38] -rw------- 1 boinc boinc      7751 Jun 23 13:17 heartbeat.json
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc      8192 Jun 23 13:17 boinc_mmap_file
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc        28 Jun 23 13:17 wrapper_checkpoint.txt
[2024-06-23 13:17:38] -rw------- 1 boinc boinc      4345 Jun 23 13:17 pilotlog.txt
[2024-06-23 13:17:38] -rw------- 1 boinc boinc   2189288 Jun 23 13:17 log.40024023._000142.job.log.1
[2024-06-23 13:17:38] -rw------- 1 boinc boinc       357 Jun 23 13:17 output.list
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc       620 Jun 23 13:17 runtime_log
[2024-06-23 13:17:38] -rw------- 1 boinc boinc   2611200 Jun 23 13:17 result.tar.gz
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc     11410 Jun 23 13:17 runtime_log.err
[2024-06-23 13:17:38] -rw------- 1 boinc boinc       659 Jun 23 13:17 XSbNDmE0Se5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmF2kKDmy1T5No.diag
[2024-06-23 13:17:38] -rw-r--r-- 1 boinc boinc     21425 Jun 23 13:17 stderr.txt
[2024-06-23 13:17:38] HITS file was successfully produced:
[2024-06-23 13:17:38] -rw------- 1 boinc boinc 258254842 Jun 23 13:16 shared/HITS.pool.root.1
[2024-06-23 13:17:38]  *** Contents of shared directory: ***
[2024-06-23 13:17:38] total 837300
[2024-06-23 13:17:38] -rw-r--r-- 2 boinc boinc 596010055 Jun 23 07:51 ATLAS.root_0
[2024-06-23 13:17:38] -rw-r--r-- 2 boinc boinc     17537 Jun 23 07:51 start_atlas.sh
[2024-06-23 13:17:38] -rw-r--r-- 2 boinc boinc    482483 Jun 23 07:51 input.tar.gz
[2024-06-23 13:17:38] -rw------- 1 boinc boinc 258254842 Jun 23 13:16 HITS.pool.root.1
[2024-06-23 13:17:38] -rw------- 1 boinc boinc   2611200 Jun 23 13:17 result.tar.gz
13:17:39 (1311214): run_atlas exited; CPU time 74285.839179
13:17:39 (1311214): called boinc_finish(0)

</stderr_txt>
]]>

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