Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:18:52 (2467849): wrapper (7.7.26015): starting
19:18:52 (2467849): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 19:18:52] Arguments: --nthreads 4
[2024-06-21 19:18:52] Threads: 4
[2024-06-21 19:18:52] Checking for CVMFS
[2024-06-21 19:18:52] No cvmfs_config command found, will try listing directly
[2024-06-21 19:18:52] CVMFS is ok
[2024-06-21 19:18:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 19:18:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 19:18:52] Further information can be found at the LHC@home message board.
[2024-06-21 19:18:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 19:18:52] Checking for apptainer binary...
[2024-06-21 19:18:52] which: no apptainer in ((null))
[2024-06-21 19:18:52] apptainer is not installed, using version from CVMFS
[2024-06-21 19:18:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 19:18:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2024-06-21 19:18:53] apptainer works
[2024-06-21 19:18:53] Set ATHENA_PROC_NUMBER=4
[2024-06-21 19:18:53] Set ATHENA_CORE_NUMBER=4
[2024-06-21 19:18:53] Starting ATLAS job with PandaID=6238832906
[2024-06-21 19:18:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 07:52:58]  *** The last 200 lines of the pilot log: ***
[2024-06-22 07:52:58] 2024-06-22 05:52:43,905 | WARNING  | GPU info not found in prmon json
[2024-06-22 07:52:58] 2024-06-22 05:52:43,905 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 07:52:58] 2024-06-22 05:52:43,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 07:52:58] 2024-06-22 05:52:43,920 | INFO     | fitting pss+swap vs Time
[2024-06-22 07:52:58] 2024-06-22 05:52:43,921 | INFO     | model: linear, x: [1718990369.0, 1718990430.0, 1718990491.0, 1718990552.0, 1718990613.0, 1718990674.0, 1718990735.0, 1718990796.0, 1718990857.0, 1718990918.0, 1718
[2024-06-22 07:52:58] 2024-06-22 05:52:43,921 | INFO     | sum of square deviations: 126163072490.0
[2024-06-22 07:52:58] 2024-06-22 05:52:43,936 | INFO     | sum of deviations: 162427032091.0
[2024-06-22 07:52:58] 2024-06-22 05:52:43,936 | INFO     | mean x: 1719012939.0
[2024-06-22 07:52:58] 2024-06-22 05:52:43,936 | INFO     | mean y: 2368465.601889339
[2024-06-22 07:52:58] 2024-06-22 05:52:43,936 | INFO     | -- intersect: -2210752729.824993
[2024-06-22 07:52:58] 2024-06-22 05:52:43,937 | INFO     | intersect: -2210752729.824993
[2024-06-22 07:52:58] 2024-06-22 05:52:43,938 | INFO     | chi2: 4.419383013464687
[2024-06-22 07:52:58] 2024-06-22 05:52:43,939 | INFO     | model: linear, x: [1718990369.0, 1718990430.0, 1718990491.0, 1718990552.0, 1718990613.0, 1718990674.0, 1718990735.0, 1718990796.0, 1718990857.0, 1718990918.0, 1718
[2024-06-22 07:52:58] 2024-06-22 05:52:43,939 | INFO     | sum of square deviations: 123626355160.0
[2024-06-22 07:52:58] 2024-06-22 05:52:43,953 | INFO     | sum of deviations: 208782037075.49994
[2024-06-22 07:52:58] 2024-06-22 05:52:43,954 | INFO     | mean x: 1719012786.5
[2024-06-22 07:52:58] 2024-06-22 05:52:43,954 | INFO     | mean y: 2371236.6127717393
[2024-06-22 07:52:58] 2024-06-22 05:52:43,954 | INFO     | -- intersect: -2900723260.1861215
[2024-06-22 07:52:58] 2024-06-22 05:52:43,954 | INFO     | intersect: -2900723260.1861215
[2024-06-22 07:52:58] 2024-06-22 05:52:43,955 | INFO     | chi2: 3.623875125932575
[2024-06-22 07:52:58] 2024-06-22 05:52:43,955 | INFO     | current chi2=3.623875125932575 (change=18.00042868220316 %)
[2024-06-22 07:52:58] 2024-06-22 05:52:43,955 | INFO     | right removable region: 735
[2024-06-22 07:52:58] 2024-06-22 05:52:43,956 | INFO     | model: linear, x: [1718990674.0, 1718990735.0, 1718990796.0, 1718990857.0, 1718990918.0, 1718990979.0, 1718991040.0, 1718991101.0, 1718991162.0, 1718991223.0, 1718
[2024-06-22 07:52:58] 2024-06-22 05:52:43,957 | INFO     | sum of square deviations: 123626355160.0
[2024-06-22 07:52:58] 2024-06-22 05:52:43,971 | INFO     | sum of deviations: -3657124185.5000076
[2024-06-22 07:52:58] 2024-06-22 05:52:43,971 | INFO     | mean x: 1719013091.5
[2024-06-22 07:52:58] 2024-06-22 05:52:43,972 | INFO     | mean y: 2378439.7676630435
[2024-06-22 07:52:58] 2024-06-22 05:52:43,972 | INFO     | -- intersect: 53230415.01177238
[2024-06-22 07:52:58] 2024-06-22 05:52:43,972 | INFO     | intersect: 53230415.01177238
[2024-06-22 07:52:58] 2024-06-22 05:52:43,973 | INFO     | chi2: 2.2423571168497767
[2024-06-22 07:52:58] 2024-06-22 05:52:43,973 | INFO     | current chi2=2.2423571168497767 (change=49.26085587019931 %)
[2024-06-22 07:52:58] 2024-06-22 05:52:43,974 | INFO     | model: linear, x: [1718990979.0, 1718991040.0, 1718991101.0, 1718991162.0, 1718991223.0, 1718991284.0, 1718991345.0, 1718991406.0, 1718991467.0, 1718991528.0, 1718
[2024-06-22 07:52:58] 2024-06-22 05:52:43,974 | INFO     | sum of square deviations: 121123871030.0
[2024-06-22 07:52:58] 2024-06-22 05:52:43,988 | INFO     | sum of deviations: -126797432352.0
[2024-06-22 07:52:58] 2024-06-22 05:52:43,989 | INFO     | mean x: 1719013244.0
[2024-06-22 07:52:58] 2024-06-22 05:52:43,989 | INFO     | mean y: 2385943.700410397
[2024-06-22 07:52:58] 2024-06-22 05:52:43,989 | INFO     | -- intersect: 1801919459.800602
[2024-06-22 07:52:58] 2024-06-22 05:52:43,989 | INFO     | intersect: 1801919459.800602
[2024-06-22 07:52:58] 2024-06-22 05:52:43,990 | INFO     | chi2: 1.1507792960479133
[2024-06-22 07:52:58] 2024-06-22 05:52:43,990 | INFO     | current chi2=1.1507792960479133 (change=48.679927590454 %)
[2024-06-22 07:52:58] 2024-06-22 05:52:43,991 | INFO     | model: linear, x: [1718991284.0, 1718991345.0, 1718991406.0, 1718991467.0, 1718991528.0, 1718991589.0, 1718991650.0, 1718991711.0, 1718991772.0, 1718991833.0, 1718
[2024-06-22 07:52:58] 2024-06-22 05:52:43,992 | INFO     | sum of square deviations: 118655387537.5
[2024-06-22 07:52:58] 2024-06-22 05:52:44,005 | INFO     | sum of deviations: -136419619871.00009
[2024-06-22 07:52:58] 2024-06-22 05:52:44,006 | INFO     | mean x: 1719013396.5
[2024-06-22 07:52:58] 2024-06-22 05:52:44,006 | INFO     | mean y: 2386533.961432507
[2024-06-22 07:52:58] 2024-06-22 05:52:44,006 | INFO     | -- intersect: 1978758268.7010188
[2024-06-22 07:52:58] 2024-06-22 05:52:44,006 | INFO     | intersect: 1978758268.7010188
[2024-06-22 07:52:58] 2024-06-22 05:52:44,007 | INFO     | chi2: 1.1134108564542555
[2024-06-22 07:52:58] 2024-06-22 05:52:44,007 | INFO     | current chi2=1.1134108564542555 (change=3.247229049218306 %)
[2024-06-22 07:52:58] 2024-06-22 05:52:44,008 | INFO     | left removable region: 30
[2024-06-22 07:52:58] 2024-06-22 05:52:44,008 | INFO     | model: linear, x: [1718992199.0, 1718992260.0, 1718992321.0, 1718992382.0, 1718992443.0, 1718992504.0, 1718992565.0, 1718992626.0, 1718992687.0, 1718992748.0, 1718
[2024-06-22 07:52:58] 2024-06-22 05:52:44,009 | INFO     | sum of square deviations: 108653795360.0
[2024-06-22 07:52:58] 2024-06-22 05:52:44,022 | INFO     | sum of deviations: -22737462933.999977
[2024-06-22 07:52:58] 2024-06-22 05:52:44,022 | INFO     | mean x: 1719013671.0
[2024-06-22 07:52:58] 2024-06-22 05:52:44,022 | INFO     | mean y: 2385197.2368794326
[2024-06-22 07:52:58] 2024-06-22 05:52:44,022 | INFO     | -- intersect: 362115011.5328182
[2024-06-22 07:52:58] 2024-06-22 05:52:44,022 | INFO     | intersect: 362115011.5328182
[2024-06-22 07:52:58] 2024-06-22 05:52:44,024 | INFO     | chi2: 0.20482071842458752
[2024-06-22 07:52:58] 2024-06-22 05:52:44,024 | INFO     | -- intersect: 362115011.5328182
[2024-06-22 07:52:58] 2024-06-22 05:52:44,024 | INFO     | current memory leak: -0.21 B/s (using 705 data points, chi2=0.20)
[2024-06-22 07:52:58] 2024-06-22 05:52:44,025 | INFO     | ..............................
[2024-06-22 07:52:58] 2024-06-22 05:52:44,025 | INFO     | . Timing measurements:
[2024-06-22 07:52:58] 2024-06-22 05:52:44,025 | INFO     | . get job = 0 s
[2024-06-22 07:52:58] 2024-06-22 05:52:44,025 | INFO     | . initial setup = 1 s
[2024-06-22 07:52:58] 2024-06-22 05:52:44,025 | INFO     | . payload setup = 4 s
[2024-06-22 07:52:58] 2024-06-22 05:52:44,025 | INFO     | . stage-in = 0 s
[2024-06-22 07:52:58] 2024-06-22 05:52:44,026 | INFO     | . payload execution = 45181 s
[2024-06-22 07:52:58] 2024-06-22 05:52:44,026 | INFO     | . stage-out = 1 s
[2024-06-22 07:52:58] 2024-06-22 05:52:44,026 | INFO     | . log creation = 0 s
[2024-06-22 07:52:58] 2024-06-22 05:52:44,026 | INFO     | ..............................
[2024-06-22 07:52:58] 2024-06-22 05:52:44,133 | INFO     | 
[2024-06-22 07:52:58] 2024-06-22 05:52:44,133 | INFO     | job summary report
[2024-06-22 07:52:58] 2024-06-22 05:52:44,133 | INFO     | --------------------------------------------------
[2024-06-22 07:52:58] 2024-06-22 05:52:44,133 | INFO     | PanDA job id: 6238832906
[2024-06-22 07:52:58] 2024-06-22 05:52:44,133 | INFO     | task id: 38921007
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | errors: (none)
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | pilot state: finished 
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | transexitcode: 0
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | exeerrorcode: 0
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | exeerrordiag: 
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | exitcode: 0
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | exitmsg: OK
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | cpuconsumptiontime: 175734 s
[2024-06-22 07:52:58] 2024-06-22 05:52:44,134 | INFO     | nevents: 400
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | neventsw: 0
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | pid: 2478889
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | pgrp: 2478889
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | corecount: 4
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | event service: False
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | sizes: {0: 2387068, 1: 2387068, 4: 2387302, 11: 2387330, 45190: 2431816, 45192: 2440798, 45194: 2440982, 45206: 2441152}
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | --------------------------------------------------
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | 
[2024-06-22 07:52:58] 2024-06-22 05:52:44,135 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-06-22 07:52:58] 2024-06-22 05:52:44,160 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,161 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,161 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,161 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,162 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 07:52:58] 2024-06-22 05:52:44,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,163 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 07:52:58] 2024-06-22 05:52:44,163 | INFO     | job 6238832906 has completed (purged errors)
[2024-06-22 07:52:58] 2024-06-22 05:52:44,163 | INFO     | overall cleanup function is called
[2024-06-22 07:52:58] 2024-06-22 05:52:45,170 | INFO     | --- collectZombieJob: --- 10, [2478889]
[2024-06-22 07:52:58] 2024-06-22 05:52:45,170 | INFO     | zombie collector waiting for pid 2478889
[2024-06-22 07:52:58] 2024-06-22 05:52:45,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 07:52:58] 2024-06-22 05:52:46,175 | INFO     | collected zombie processes
[2024-06-22 07:52:58] 2024-06-22 05:52:46,175 | INFO     | will now attempt to kill all subprocesses of pid=2478889
[2024-06-22 07:52:58] 2024-06-22 05:52:46,321 | INFO     | process IDs to be killed: [2478889] (in reverse order)
[2024-06-22 07:52:58] 2024-06-22 05:52:46,456 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 07:52:58] 2024-06-22 05:52:46,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 07:52:58] 2024-06-22 05:52:46,464 | INFO     | did not find any defunct processes belonging to 2478889
[2024-06-22 07:52:58] 2024-06-22 05:52:46,471 | INFO     | did not find any defunct processes belonging to 2478889
[2024-06-22 07:52:58] 2024-06-22 05:52:46,471 | INFO     | ready for new job
[2024-06-22 07:52:58] 2024-06-22 05:52:46,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 07:52:58] 2024-06-22 05:52:46,475 | INFO     | *************************************
[2024-06-22 07:52:58] 2024-06-22 05:52:46,475 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 07:52:58] 2024-06-22 05:52:46,476 | INFO     | *************************************
[2024-06-22 07:52:58] 2024-06-22 05:52:46,476 | INFO     | 
[2024-06-22 07:52:58] 2024-06-22 05:52:46,478 | INFO     | architecture information:
[2024-06-22 07:52:58] 2024-06-22 05:52:46,478 | INFO     | executing command: cat /etc/os-release
[2024-06-22 07:52:58] 2024-06-22 05:52:46,492 | INFO     | cat /etc/os-release:
[2024-06-22 07:52:58] NAME="CentOS Linux"
[2024-06-22 07:52:58] VERSION="7 (Core)"
[2024-06-22 07:52:58] ID="centos"
[2024-06-22 07:52:58] ID_LIKE="rhel fedora"
[2024-06-22 07:52:58] VERSION_ID="7"
[2024-06-22 07:52:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 07:52:58] ANSI_COLOR="0;31"
[2024-06-22 07:52:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 07:52:58] HOME_URL="https://www.centos.org/"
[2024-06-22 07:52:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 07:52:58] 
[2024-06-22 07:52:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 07:52:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 07:52:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 07:52:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 07:52:58] 
[2024-06-22 07:52:58] 2024-06-22 05:52:46,492 | INFO     | *************************************
[2024-06-22 07:52:58] 2024-06-22 05:52:46,995 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-06-22 07:52:58] 2024-06-22 05:52:47,015 | INFO     | sufficient remaining disk space (1658431995904 B)
[2024-06-22 07:52:58] 2024-06-22 05:52:47,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 07:52:58] 2024-06-22 05:52:47,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 07:52:58] 2024-06-22 05:52:47,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 07:52:58] 2024-06-22 05:52:47,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 07:52:58] 2024-06-22 05:52:47,017 | INFO     | aborting loop
[2024-06-22 07:52:58] 2024-06-22 05:52:47,104 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 07:52:58] 2024-06-22 05:52:47,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 07:52:58] 2024-06-22 05:52:47,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 07:52:58] 2024-06-22 05:52:47,205 | INFO     | all job control threads have been joined
[2024-06-22 07:52:58] 2024-06-22 05:52:47,363 | INFO     | all data control threads have been joined
[2024-06-22 07:52:58] 2024-06-22 05:52:47,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 07:52:58] 2024-06-22 05:52:48,021 | INFO     | [job] retrieve thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,022 | INFO     | [job] job monitor thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,096 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,103 | INFO     | [data] copytool_in thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,210 | INFO     | [job] control thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,254 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,333 | INFO     | [payload] validate_post thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,368 | INFO     | [data] control thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,433 | INFO     | all payload control threads have been joined
[2024-06-22 07:52:58] 2024-06-22 05:52:48,451 | INFO     | [payload] failed_post thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:48,999 | INFO     | [job] validate thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:49,083 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:49,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 07:52:58] 2024-06-22 05:52:49,145 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:49,438 | INFO     | [payload] control thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:49,864 | INFO     | [data] copytool_out thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:50,130 | INFO     | [job] queue monitor thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:51,023 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 07:52:58] 2024-06-22 05:52:52,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47667985720384)>', '<ExcThread(monitor, started 47668575352576)>']
[2024-06-22 07:52:58] 2024-06-22 05:52:52,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 07:52:58] 2024-06-22 05:52:52,129 | INFO     | [monitor] control thread has ended
[2024-06-22 07:52:58] 2024-06-22 05:52:57,137 | INFO     | all workflow threads have been joined
[2024-06-22 07:52:58] 2024-06-22 05:52:57,137 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 07:52:58] 2024-06-22 05:52:57,137 | INFO     | traces error code: 0
[2024-06-22 07:52:58] 2024-06-22 05:52:57,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 07:52:58] 2024-06-22 05:52:57,228 [wrapper] ==== pilot stdout END ====
[2024-06-22 07:52:58] 2024-06-22 05:52:57,230 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 07:52:58] 2024-06-22 05:52:57,232 [wrapper] pilotpid: 2472057
[2024-06-22 07:52:58] 2024-06-22 05:52:57,233 [wrapper] Pilot exit status: 0
[2024-06-22 07:52:58] 2024-06-22 05:52:57,249 [wrapper] pandaids: 6238832906
[2024-06-22 07:52:58] 2024-06-22 05:52:57,317 [wrapper] cleanup supervisor_pilot 3601269 2472058
[2024-06-22 07:52:58] 2024-06-22 05:52:57,319 [wrapper] Test setup, not cleaning
[2024-06-22 07:52:58] 2024-06-22 05:52:57,321 [wrapper] ==== wrapper stdout END ====
[2024-06-22 07:52:58] 2024-06-22 05:52:57,327 [wrapper] ==== wrapper stderr END ====
[2024-06-22 07:52:58] 2024-06-22 05:52:57,341 [wrapper] apfmon messages muted
[2024-06-22 07:52:58]  *** Error codes and diagnostics ***
[2024-06-22 07:52:58]     "exeErrorCode": 0,
[2024-06-22 07:52:58]     "exeErrorDiag": "",
[2024-06-22 07:52:58]     "pilotErrorCode": 0,
[2024-06-22 07:52:58]     "pilotErrorDiag": "",
[2024-06-22 07:52:58]  *** Listing of results directory ***
[2024-06-22 07:52:58] total 930020
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:08 queuedata.json
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc    469766 Jun 20 11:08 pilot3.tar.gz
[2024-06-22 07:52:58] -rwx------ 1 boinc boinc     32308 Jun 20 11:08 runpilot2-wrapper.sh
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc       100 Jun 21 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 07:52:58] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 19:18 run_atlas
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc       105 Jun 21 19:18 job.xml
[2024-06-22 07:52:58] -rw-r--r-- 2 boinc boinc 584371666 Jun 21 19:18 EVNT.38776201._000632.pool.root.1
[2024-06-22 07:52:58] -rw-r--r-- 2 boinc boinc     17537 Jun 21 19:18 start_atlas.sh
[2024-06-22 07:52:58] drwxrwx--x 2 boinc boinc      4096 Jun 21 19:18 shared
[2024-06-22 07:52:58] -rw-r--r-- 2 boinc boinc    482522 Jun 21 19:18 input.tar.gz
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc      6454 Jun 21 19:18 init_data.xml
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc         0 Jun 21 19:18 boinc_lockfile
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc      2629 Jun 21 19:18 pandaJob.out
[2024-06-22 07:52:58] -rw------- 1 boinc boinc       424 Jun 21 19:18 setup.sh.local
[2024-06-22 07:52:58] -rw------- 1 boinc boinc   1025624 Jun 21 19:19 agis_schedconf.cvmfs.json
[2024-06-22 07:52:58] -rw------- 1 boinc boinc   1321363 Jun 21 19:19 cric_ddmendpoints.json
[2024-06-22 07:52:58] drwx------ 4 boinc boinc      4096 Jun 21 19:19 pilot3
[2024-06-22 07:52:58] -rw------- 1 boinc boinc 352392669 Jun 22 07:51 HITS.38921007._051155.pool.root.1
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc       532 Jun 22 07:51 boinc_task_state.xml
[2024-06-22 07:52:58] -rw------- 1 boinc boinc      1043 Jun 22 07:52 memory_monitor_summary.json
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc        29 Jun 22 07:52 wrapper_checkpoint.txt
[2024-06-22 07:52:58] -rw------- 1 boinc boinc         0 Jun 22 07:52 agis_ddmendpoints.agis.ALL.json
[2024-06-22 07:52:58] -rw------- 1 boinc boinc    680818 Jun 22 07:52 log.38921007._051155.job.log.tgz.1
[2024-06-22 07:52:58] -rw------- 1 boinc boinc        95 Jun 22 07:52 pilot_heartbeat.json
[2024-06-22 07:52:58] -rw------- 1 boinc boinc      7764 Jun 22 07:52 heartbeat.json
[2024-06-22 07:52:58] -rw------- 1 boinc boinc      4222 Jun 22 07:52 pilotlog.txt
[2024-06-22 07:52:58] -rw------- 1 boinc boinc   5346014 Jun 22 07:52 log.38921007._051155.job.log.1
[2024-06-22 07:52:58] -rw------- 1 boinc boinc       357 Jun 22 07:52 output.list
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc       620 Jun 22 07:52 runtime_log
[2024-06-22 07:52:58] -rw------- 1 boinc boinc   6041600 Jun 22 07:52 result.tar.gz
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc     11410 Jun 22 07:52 runtime_log.err
[2024-06-22 07:52:58] -rw------- 1 boinc boinc       660 Jun 22 07:52 SVhKDmtxSe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmvjqKDmUTMfPo.diag
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc      8192 Jun 22 07:52 boinc_mmap_file
[2024-06-22 07:52:58] -rw-r--r-- 1 boinc boinc      9189 Jun 22 07:52 stderr.txt
[2024-06-22 07:52:58] HITS file was successfully produced:
[2024-06-22 07:52:58] -rw------- 1 boinc boinc 352392669 Jun 22 07:51 shared/HITS.pool.root.1
[2024-06-22 07:52:58]  *** Contents of shared directory: ***
[2024-06-22 07:52:58] total 921212
[2024-06-22 07:52:58] -rw-r--r-- 2 boinc boinc 584371666 Jun 21 19:18 ATLAS.root_0
[2024-06-22 07:52:58] -rw-r--r-- 2 boinc boinc     17537 Jun 21 19:18 start_atlas.sh
[2024-06-22 07:52:58] -rw-r--r-- 2 boinc boinc    482522 Jun 21 19:18 input.tar.gz
[2024-06-22 07:52:58] -rw------- 1 boinc boinc 352392669 Jun 22 07:51 HITS.pool.root.1
[2024-06-22 07:52:58] -rw------- 1 boinc boinc   6041600 Jun 22 07:52 result.tar.gz
07:53:00 (2467849): run_atlas exited; CPU time 175331.385839
07:53:00 (2467849): called boinc_finish(0)

</stderr_txt>
]]>

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