Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:25 (1324683): wrapper (7.7.26015): starting
06:03:25 (1324683): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 06:03:25] Arguments: --nthreads 4
[2024-06-21 06:03:25] Threads: 4
[2024-06-21 06:03:25] Checking for CVMFS
[2024-06-21 06:03:25] No cvmfs_config command found, will try listing directly
[2024-06-21 06:03:25] CVMFS is ok
[2024-06-21 06:03:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 06:03:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 06:03:25] Further information can be found at the LHC@home message board.
[2024-06-21 06:03:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 06:03:25] Checking for apptainer binary...
[2024-06-21 06:03:25] which: no apptainer in ((null))
[2024-06-21 06:03:25] apptainer is not installed, using version from CVMFS
[2024-06-21 06:03:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 06:03:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-21 06:03:26] apptainer works
[2024-06-21 06:03:26] Set ATHENA_PROC_NUMBER=4
[2024-06-21 06:03:26] Set ATHENA_CORE_NUMBER=4
[2024-06-21 06:03:26] Starting ATLAS job with PandaID=6238832395
[2024-06-21 06:03:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 18:44:11]  *** The last 200 lines of the pilot log: ***
[2024-06-21 18:44:11] 2024-06-21 16:43:58,752 | WARNING  | GPU info not found in prmon json
[2024-06-21 18:44:11] 2024-06-21 16:43:58,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 18:44:11] 2024-06-21 16:43:58,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 18:44:11] 2024-06-21 16:43:58,760 | INFO     | fitting pss+swap vs Time
[2024-06-21 18:44:11] 2024-06-21 16:43:58,761 | INFO     | model: linear, x: [1718942652.0, 1718942713.0, 1718942774.0, 1718942835.0, 1718942896.0, 1718942957.0, 1718943018.0, 1718943079.0, 1718943140.0, 1718943201.0, 1718
[2024-06-21 18:44:11] 2024-06-21 16:43:58,761 | INFO     | sum of square deviations: 129772431327.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,769 | INFO     | sum of deviations: 418096811459.50006
[2024-06-21 18:44:11] 2024-06-21 16:43:58,769 | INFO     | mean x: 1718965435.5
[2024-06-21 18:44:11] 2024-06-21 16:43:58,769 | INFO     | mean y: 2360390.720588235
[2024-06-21 18:44:11] 2024-06-21 16:43:58,769 | INFO     | -- intersect: -5535749362.195106
[2024-06-21 18:44:11] 2024-06-21 16:43:58,769 | INFO     | intersect: -5535749362.195106
[2024-06-21 18:44:11] 2024-06-21 16:43:58,770 | INFO     | chi2: 4.064045388428633
[2024-06-21 18:44:11] 2024-06-21 16:43:58,771 | INFO     | model: linear, x: [1718942652.0, 1718942713.0, 1718942774.0, 1718942835.0, 1718942896.0, 1718942957.0, 1718943018.0, 1718943079.0, 1718943140.0, 1718943201.0, 1718
[2024-06-21 18:44:11] 2024-06-21 16:43:58,771 | INFO     | sum of square deviations: 127187396812.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,779 | INFO     | sum of deviations: 463113728435.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,779 | INFO     | mean x: 1718965283.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,779 | INFO     | mean y: 2363030.9084791387
[2024-06-21 18:44:11] 2024-06-21 16:43:58,779 | INFO     | -- intersect: -6256719560.719389
[2024-06-21 18:44:11] 2024-06-21 16:43:58,779 | INFO     | intersect: -6256719560.719389
[2024-06-21 18:44:11] 2024-06-21 16:43:58,780 | INFO     | chi2: 3.2596713618219364
[2024-06-21 18:44:11] 2024-06-21 16:43:58,780 | INFO     | current chi2=3.2596713618219364 (change=19.792446927314188 %)
[2024-06-21 18:44:11] 2024-06-21 16:43:58,780 | INFO     | right removable region: 742
[2024-06-21 18:44:11] 2024-06-21 16:43:58,780 | INFO     | model: linear, x: [1718942957.0, 1718943018.0, 1718943079.0, 1718943140.0, 1718943201.0, 1718943262.0, 1718943323.0, 1718943384.0, 1718943445.0, 1718943506.0, 1718
[2024-06-21 18:44:11] 2024-06-21 16:43:58,781 | INFO     | sum of square deviations: 127187396812.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,789 | INFO     | sum of deviations: 250772089642.99997
[2024-06-21 18:44:11] 2024-06-21 16:43:58,789 | INFO     | mean x: 1718965588.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,789 | INFO     | mean y: 2370251.5827725437
[2024-06-21 18:44:11] 2024-06-21 16:43:58,789 | INFO     | -- intersect: -3386869589.251026
[2024-06-21 18:44:11] 2024-06-21 16:43:58,789 | INFO     | intersect: -3386869589.251026
[2024-06-21 18:44:11] 2024-06-21 16:43:58,790 | INFO     | chi2: 1.9357088773505087
[2024-06-21 18:44:11] 2024-06-21 16:43:58,790 | INFO     | current chi2=1.9357088773505087 (change=52.369900128035916 %)
[2024-06-21 18:44:11] 2024-06-21 16:43:58,790 | INFO     | model: linear, x: [1718943262.0, 1718943323.0, 1718943384.0, 1718943445.0, 1718943506.0, 1718943567.0, 1718943628.0, 1718943689.0, 1718943750.0, 1718943811.0, 1718
[2024-06-21 18:44:11] 2024-06-21 16:43:58,791 | INFO     | sum of square deviations: 124636921084.5
[2024-06-21 18:44:11] 2024-06-21 16:43:58,799 | INFO     | sum of deviations: 126966361451.49948
[2024-06-21 18:44:11] 2024-06-21 16:43:58,799 | INFO     | mean x: 1718965740.5
[2024-06-21 18:44:11] 2024-06-21 16:43:58,799 | INFO     | mean y: 2377654.0799457994
[2024-06-21 18:44:11] 2024-06-21 16:43:58,799 | INFO     | -- intersect: -1748715229.4092097
[2024-06-21 18:44:11] 2024-06-21 16:43:58,799 | INFO     | intersect: -1748715229.4092097
[2024-06-21 18:44:11] 2024-06-21 16:43:58,800 | INFO     | chi2: 0.9014927673370753
[2024-06-21 18:44:11] 2024-06-21 16:43:58,800 | INFO     | current chi2=0.9014927673370753 (change=53.42828780270983 %)
[2024-06-21 18:44:11] 2024-06-21 16:43:58,801 | INFO     | model: linear, x: [1718943567.0, 1718943628.0, 1718943689.0, 1718943750.0, 1718943811.0, 1718943872.0, 1718943933.0, 1718943994.0, 1718944055.0, 1718944116.0, 1718
[2024-06-21 18:44:11] 2024-06-21 16:43:58,801 | INFO     | sum of square deviations: 122120771582.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,809 | INFO     | sum of deviations: 96984408740.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,809 | INFO     | mean x: 1718965893.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,809 | INFO     | mean y: 2379470.4079126874
[2024-06-21 18:44:11] 2024-06-21 16:43:58,809 | INFO     | -- intersect: -1362768232.289732
[2024-06-21 18:44:11] 2024-06-21 16:43:58,809 | INFO     | intersect: -1362768232.289732
[2024-06-21 18:44:11] 2024-06-21 16:43:58,810 | INFO     | chi2: 0.8444029103787911
[2024-06-21 18:44:11] 2024-06-21 16:43:58,810 | INFO     | current chi2=0.8444029103787911 (change=6.332813642745269 %)
[2024-06-21 18:44:11] 2024-06-21 16:43:58,810 | INFO     | left removable region: 30
[2024-06-21 18:44:11] 2024-06-21 16:43:58,810 | INFO     | model: linear, x: [1718944482.0, 1718944543.0, 1718944604.0, 1718944665.0, 1718944726.0, 1718944787.0, 1718944848.0, 1718944909.0, 1718944970.0, 1718945031.0, 1718
[2024-06-21 18:44:11] 2024-06-21 16:43:58,811 | INFO     | sum of square deviations: 111922537578.0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,818 | INFO     | sum of deviations: 117619080924.50002
[2024-06-21 18:44:11] 2024-06-21 16:43:58,818 | INFO     | mean x: 1718966167.5
[2024-06-21 18:44:11] 2024-06-21 16:43:58,818 | INFO     | mean y: 2383855.540730337
[2024-06-21 18:44:11] 2024-06-21 16:43:58,818 | INFO     | -- intersect: -1804072870.1277394
[2024-06-21 18:44:11] 2024-06-21 16:43:58,819 | INFO     | intersect: -1804072870.1277394
[2024-06-21 18:44:11] 2024-06-21 16:43:58,819 | INFO     | chi2: 0.00911548658318371
[2024-06-21 18:44:11] 2024-06-21 16:43:58,819 | INFO     | -- intersect: -1804072870.1277394
[2024-06-21 18:44:11] 2024-06-21 16:43:58,819 | INFO     | current memory leak: 1.05 B/s (using 712 data points, chi2=0.01)
[2024-06-21 18:44:11] 2024-06-21 16:43:58,820 | INFO     | ..............................
[2024-06-21 18:44:11] 2024-06-21 16:43:58,820 | INFO     | . Timing measurements:
[2024-06-21 18:44:11] 2024-06-21 16:43:58,820 | INFO     | . get job = 0 s
[2024-06-21 18:44:11] 2024-06-21 16:43:58,821 | INFO     | . initial setup = 1 s
[2024-06-21 18:44:11] 2024-06-21 16:43:58,821 | INFO     | . payload setup = 8 s
[2024-06-21 18:44:11] 2024-06-21 16:43:58,821 | INFO     | . stage-in = 0 s
[2024-06-21 18:44:11] 2024-06-21 16:43:58,821 | INFO     | . payload execution = 45578 s
[2024-06-21 18:44:11] 2024-06-21 16:43:58,821 | INFO     | . stage-out = 1 s
[2024-06-21 18:44:11] 2024-06-21 16:43:58,821 | INFO     | . log creation = 0 s
[2024-06-21 18:44:11] 2024-06-21 16:43:58,821 | INFO     | ..............................
[2024-06-21 18:44:11] 2024-06-21 16:43:58,894 | INFO     | 
[2024-06-21 18:44:11] 2024-06-21 16:43:58,895 | INFO     | job summary report
[2024-06-21 18:44:11] 2024-06-21 16:43:58,895 | INFO     | --------------------------------------------------
[2024-06-21 18:44:11] 2024-06-21 16:43:58,895 | INFO     | PanDA job id: 6238832395
[2024-06-21 18:44:11] 2024-06-21 16:43:58,895 | INFO     | task id: 38921007
[2024-06-21 18:44:11] 2024-06-21 16:43:58,895 | INFO     | errors: (none)
[2024-06-21 18:44:11] 2024-06-21 16:43:58,896 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 18:44:11] 2024-06-21 16:43:58,896 | INFO     | pilot state: finished 
[2024-06-21 18:44:11] 2024-06-21 16:43:58,896 | INFO     | transexitcode: 0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,896 | INFO     | exeerrorcode: 0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,896 | INFO     | exeerrordiag: 
[2024-06-21 18:44:11] 2024-06-21 16:43:58,896 | INFO     | exitcode: 0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,896 | INFO     | exitmsg: OK
[2024-06-21 18:44:11] 2024-06-21 16:43:58,896 | INFO     | cpuconsumptiontime: 177775 s
[2024-06-21 18:44:11] 2024-06-21 16:43:58,897 | INFO     | nevents: 400
[2024-06-21 18:44:11] 2024-06-21 16:43:58,897 | INFO     | neventsw: 0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,897 | INFO     | pid: 1338435
[2024-06-21 18:44:11] 2024-06-21 16:43:58,897 | INFO     | pgrp: 1338435
[2024-06-21 18:44:11] 2024-06-21 16:43:58,897 | INFO     | corecount: 4
[2024-06-21 18:44:11] 2024-06-21 16:43:58,897 | INFO     | event service: False
[2024-06-21 18:44:11] 2024-06-21 16:43:58,897 | INFO     | sizes: {0: 2387048, 5: 2387254, 11: 2387310, 45590: 2431964, 45592: 2440946, 45595: 2441002, 45602: 2441300}
[2024-06-21 18:44:11] 2024-06-21 16:43:58,897 | INFO     | --------------------------------------------------
[2024-06-21 18:44:11] 2024-06-21 16:43:58,898 | INFO     | 
[2024-06-21 18:44:11] 2024-06-21 16:43:58,898 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-06-21 18:44:11] 2024-06-21 16:43:58,920 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,920 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,921 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,921 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,922 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 18:44:11] 2024-06-21 16:43:58,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,923 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 18:44:11] 2024-06-21 16:43:58,923 | INFO     | job 6238832395 has completed (purged errors)
[2024-06-21 18:44:11] 2024-06-21 16:43:58,923 | INFO     | overall cleanup function is called
[2024-06-21 18:44:11] 2024-06-21 16:43:59,930 | INFO     | --- collectZombieJob: --- 10, [1338435]
[2024-06-21 18:44:11] 2024-06-21 16:43:59,931 | INFO     | zombie collector waiting for pid 1338435
[2024-06-21 18:44:11] 2024-06-21 16:43:59,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 18:44:11] 2024-06-21 16:44:00,936 | INFO     | collected zombie processes
[2024-06-21 18:44:11] 2024-06-21 16:44:00,936 | INFO     | will now attempt to kill all subprocesses of pid=1338435
[2024-06-21 18:44:11] 2024-06-21 16:44:01,038 | INFO     | process IDs to be killed: [1338435] (in reverse order)
[2024-06-21 18:44:11] 2024-06-21 16:44:01,102 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 18:44:11] 2024-06-21 16:44:01,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 18:44:11] 2024-06-21 16:44:01,108 | INFO     | did not find any defunct processes belonging to 1338435
[2024-06-21 18:44:11] 2024-06-21 16:44:01,113 | INFO     | did not find any defunct processes belonging to 1338435
[2024-06-21 18:44:11] 2024-06-21 16:44:01,113 | INFO     | ready for new job
[2024-06-21 18:44:11] 2024-06-21 16:44:01,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 18:44:11] 2024-06-21 16:44:01,117 | INFO     | *************************************
[2024-06-21 18:44:11] 2024-06-21 16:44:01,117 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 18:44:11] 2024-06-21 16:44:01,118 | INFO     | *************************************
[2024-06-21 18:44:11] 2024-06-21 16:44:01,118 | INFO     | 
[2024-06-21 18:44:11] 2024-06-21 16:44:01,120 | INFO     | architecture information:
[2024-06-21 18:44:11] 2024-06-21 16:44:01,120 | INFO     | executing command: cat /etc/os-release
[2024-06-21 18:44:11] 2024-06-21 16:44:01,134 | INFO     | cat /etc/os-release:
[2024-06-21 18:44:11] NAME="CentOS Linux"
[2024-06-21 18:44:11] VERSION="7 (Core)"
[2024-06-21 18:44:11] ID="centos"
[2024-06-21 18:44:11] ID_LIKE="rhel fedora"
[2024-06-21 18:44:11] VERSION_ID="7"
[2024-06-21 18:44:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 18:44:11] ANSI_COLOR="0;31"
[2024-06-21 18:44:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 18:44:11] HOME_URL="https://www.centos.org/"
[2024-06-21 18:44:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 18:44:11] 
[2024-06-21 18:44:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 18:44:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 18:44:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 18:44:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 18:44:11] 
[2024-06-21 18:44:11] 2024-06-21 16:44:01,135 | INFO     | *************************************
[2024-06-21 18:44:11] 2024-06-21 16:44:01,637 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-06-21 18:44:11] 2024-06-21 16:44:01,656 | INFO     | sufficient remaining disk space (1658270515200 B)
[2024-06-21 18:44:11] 2024-06-21 16:44:01,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 18:44:11] 2024-06-21 16:44:01,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 18:44:11] 2024-06-21 16:44:01,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 18:44:11] 2024-06-21 16:44:01,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 18:44:11] 2024-06-21 16:44:01,907 | INFO     | all job control threads have been joined
[2024-06-21 18:44:11] 2024-06-21 16:44:01,952 | INFO     | all payload control threads have been joined
[2024-06-21 18:44:11] 2024-06-21 16:44:02,253 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 18:44:11] 2024-06-21 16:44:02,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 18:44:11] 2024-06-21 16:44:02,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 18:44:11] 2024-06-21 16:44:02,284 | INFO     | all data control threads have been joined
[2024-06-21 18:44:11] 2024-06-21 16:44:02,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 18:44:11] 2024-06-21 16:44:02,525 | INFO     | aborting loop
[2024-06-21 18:44:11] 2024-06-21 16:44:02,661 | INFO     | [job] retrieve thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:02,831 | INFO     | [job] validate thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:02,838 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:02,912 | INFO     | [job] control thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:02,957 | INFO     | [payload] control thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:03,095 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:03,289 | INFO     | [data] control thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:03,529 | INFO     | [job] job monitor thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:03,626 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:03,769 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:03,769 | INFO     | [data] copytool_in thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:03,820 | INFO     | [data] copytool_out thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:03,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 18:44:11] 2024-06-21 16:44:03,920 | INFO     | [payload] validate_post thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:04,017 | INFO     | [payload] failed_post thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:04,909 | INFO     | [job] queue monitor thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:05,757 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 18:44:11] 2024-06-21 16:44:06,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47454977160256)>', '<ExcThread(monitor, started 47455632623360)>']
[2024-06-21 18:44:11] 2024-06-21 16:44:06,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 18:44:11] 2024-06-21 16:44:06,274 | INFO     | [monitor] control thread has ended
[2024-06-21 18:44:11] 2024-06-21 16:44:11,132 | INFO     | all workflow threads have been joined
[2024-06-21 18:44:11] 2024-06-21 16:44:11,132 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 18:44:11] 2024-06-21 16:44:11,133 | INFO     | traces error code: 0
[2024-06-21 18:44:11] 2024-06-21 16:44:11,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 18:44:11] 2024-06-21 16:44:11,206 [wrapper] ==== pilot stdout END ====
[2024-06-21 18:44:11] 2024-06-21 16:44:11,208 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 18:44:11] 2024-06-21 16:44:11,210 [wrapper] pilotpid: 1330319
[2024-06-21 18:44:11] 2024-06-21 16:44:11,212 [wrapper] Pilot exit status: 0
[2024-06-21 18:44:11] 2024-06-21 16:44:11,222 [wrapper] pandaids: 6238832395
[2024-06-21 18:44:11] 2024-06-21 16:44:11,281 [wrapper] cleanup supervisor_pilot 2438556 1330320
[2024-06-21 18:44:11] 2024-06-21 16:44:11,284 [wrapper] Test setup, not cleaning
[2024-06-21 18:44:11] 2024-06-21 16:44:11,286 [wrapper] ==== wrapper stdout END ====
[2024-06-21 18:44:11] 2024-06-21 16:44:11,290 [wrapper] ==== wrapper stderr END ====
[2024-06-21 18:44:11] 2024-06-21 16:44:11,295 [wrapper] apfmon messages muted
[2024-06-21 18:44:11]  *** Error codes and diagnostics ***
[2024-06-21 18:44:11]     "exeErrorCode": 0,
[2024-06-21 18:44:11]     "exeErrorDiag": "",
[2024-06-21 18:44:11]     "pilotErrorCode": 0,
[2024-06-21 18:44:11]     "pilotErrorDiag": "",
[2024-06-21 18:44:11]  *** Listing of results directory ***
[2024-06-21 18:44:11] total 926812
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:05 queuedata.json
[2024-06-21 18:44:11] -rwx------ 1 boinc boinc     32308 Jun 20 11:06 runpilot2-wrapper.sh
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc       100 Jun 21 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 18:44:11] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 06:03 run_atlas
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc       105 Jun 21 06:03 job.xml
[2024-06-21 18:44:11] drwxrwx--x 2 boinc boinc      4096 Jun 21 06:03 shared
[2024-06-21 18:44:11] -rw-r--r-- 2 boinc boinc    482534 Jun 21 06:03 input.tar.gz
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc      6455 Jun 21 06:03 init_data.xml
[2024-06-21 18:44:11] -rw-r--r-- 2 boinc boinc 584888854 Jun 21 06:03 EVNT.38776201._000617.pool.root.1
[2024-06-21 18:44:11] -rw-r--r-- 2 boinc boinc     17537 Jun 21 06:03 start_atlas.sh
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc         0 Jun 21 06:03 boinc_lockfile
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc      2629 Jun 21 06:03 pandaJob.out
[2024-06-21 18:44:11] -rw------- 1 boinc boinc       424 Jun 21 06:03 setup.sh.local
[2024-06-21 18:44:11] -rw------- 1 boinc boinc   1024126 Jun 21 06:03 agis_schedconf.cvmfs.json
[2024-06-21 18:44:11] -rw------- 1 boinc boinc   1321251 Jun 21 06:03 cric_ddmendpoints.json
[2024-06-21 18:44:11] drwx------ 4 boinc boinc      4096 Jun 21 06:03 pilot3
[2024-06-21 18:44:11] -rw------- 1 boinc boinc 347273666 Jun 21 18:43 HITS.38921007._051149.pool.root.1
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc       532 Jun 21 18:43 boinc_task_state.xml
[2024-06-21 18:44:11] -rw------- 1 boinc boinc        95 Jun 21 18:43 pilot_heartbeat.json
[2024-06-21 18:44:11] -rw------- 1 boinc boinc      1042 Jun 21 18:43 memory_monitor_summary.json
[2024-06-21 18:44:11] -rw------- 1 boinc boinc         0 Jun 21 18:43 agis_ddmendpoints.agis.ALL.json
[2024-06-21 18:44:11] -rw------- 1 boinc boinc    720429 Jun 21 18:43 log.38921007._051149.job.log.tgz.1
[2024-06-21 18:44:11] -rw------- 1 boinc boinc      7766 Jun 21 18:43 heartbeat.json
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc      8192 Jun 21 18:44 boinc_mmap_file
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc        29 Jun 21 18:44 wrapper_checkpoint.txt
[2024-06-21 18:44:11] -rw------- 1 boinc boinc      4222 Jun 21 18:44 pilotlog.txt
[2024-06-21 18:44:11] -rw------- 1 boinc boinc   5957532 Jun 21 18:44 log.38921007._051149.job.log.1
[2024-06-21 18:44:11] -rw------- 1 boinc boinc       357 Jun 21 18:44 output.list
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc       620 Jun 21 18:44 runtime_log
[2024-06-21 18:44:11] -rw------- 1 boinc boinc   6696960 Jun 21 18:44 result.tar.gz
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc     11410 Jun 21 18:44 runtime_log.err
[2024-06-21 18:44:11] -rw------- 1 boinc boinc       660 Jun 21 18:44 gZiMDmBvSe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm81kKDmq9MxHm.diag
[2024-06-21 18:44:11] -rw-r--r-- 1 boinc boinc     21291 Jun 21 18:44 stderr.txt
[2024-06-21 18:44:12] HITS file was successfully produced:
[2024-06-21 18:44:12] -rw------- 1 boinc boinc 347273666 Jun 21 18:43 shared/HITS.pool.root.1
[2024-06-21 18:44:12]  *** Contents of shared directory: ***
[2024-06-21 18:44:12] total 917360
[2024-06-21 18:44:12] -rw-r--r-- 2 boinc boinc    482534 Jun 21 06:03 input.tar.gz
[2024-06-21 18:44:12] -rw-r--r-- 2 boinc boinc 584888854 Jun 21 06:03 ATLAS.root_0
[2024-06-21 18:44:12] -rw-r--r-- 2 boinc boinc     17537 Jun 21 06:03 start_atlas.sh
[2024-06-21 18:44:12] -rw------- 1 boinc boinc 347273666 Jun 21 18:43 HITS.pool.root.1
[2024-06-21 18:44:12] -rw------- 1 boinc boinc   6696960 Jun 21 18:44 result.tar.gz
18:44:13 (1324683): run_atlas exited; CPU time 177375.492121
18:44:13 (1324683): called boinc_finish(0)

</stderr_txt>
]]>

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