Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:27 (165957): wrapper (7.7.26015): starting
14:47:27 (165957): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 14:47:27] Arguments: --nthreads 4
[2024-06-24 14:47:27] Threads: 4
[2024-06-24 14:47:27] Checking for CVMFS
[2024-06-24 14:47:27] No cvmfs_config command found, will try listing directly
[2024-06-24 14:47:27] CVMFS is ok
[2024-06-24 14:47:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 14:47:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 14:47:27] Further information can be found at the LHC@home message board.
[2024-06-24 14:47:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 14:47:27] Checking for apptainer binary...
[2024-06-24 14:47:27] which: no apptainer in ((null))
[2024-06-24 14:47:27] apptainer is not installed, using version from CVMFS
[2024-06-24 14:47:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 14:47:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2024-06-24 14:47:28] apptainer works
[2024-06-24 14:47:28] Set ATHENA_PROC_NUMBER=4
[2024-06-24 14:47:28] Set ATHENA_CORE_NUMBER=4
[2024-06-24 14:47:28] Starting ATLAS job with PandaID=6238831448
[2024-06-24 14:47:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-25 05:45:09]  *** The last 200 lines of the pilot log: ***
[2024-06-25 05:45:09] 2024-06-25 03:44:48,945 | INFO     | model: linear, x: [1719233288.0, 1719233349.0, 1719233410.0, 1719233471.0, 1719233532.0, 1719233593.0, 1719233654.0, 1719233715.0, 1719233776.0, 1719233837.0, 1719
[2024-06-25 05:45:09] 2024-06-25 03:44:48,945 | INFO     | sum of square deviations: 212756884000.5
[2024-06-25 05:45:09] 2024-06-25 03:44:48,956 | INFO     | sum of deviations: 450960374586.00006
[2024-06-25 05:45:09] 2024-06-25 03:44:48,956 | INFO     | mean x: 1719260158.5
[2024-06-25 05:45:09] 2024-06-25 03:44:48,956 | INFO     | mean y: 2365197.2653061226
[2024-06-25 05:45:09] 2024-06-25 03:44:48,956 | INFO     | -- intersect: -3641785772.186398
[2024-06-25 05:45:09] 2024-06-25 03:44:48,956 | INFO     | intersect: -3641785772.186398
[2024-06-25 05:45:09] 2024-06-25 03:44:48,957 | INFO     | chi2: 3.32368942764139
[2024-06-25 05:45:09] 2024-06-25 03:44:48,957 | INFO     | model: linear, x: [1719233288.0, 1719233349.0, 1719233410.0, 1719233471.0, 1719233532.0, 1719233593.0, 1719233654.0, 1719233715.0, 1719233776.0, 1719233837.0, 1719
[2024-06-25 05:45:09] 2024-06-25 03:44:48,958 | INFO     | sum of square deviations: 209159039798.0
[2024-06-25 05:45:09] 2024-06-25 03:44:48,968 | INFO     | sum of deviations: 447886673645.99994
[2024-06-25 05:45:09] 2024-06-25 03:44:48,968 | INFO     | monitor loop #4004: job 0:6238831448 is in state 'finished'
[2024-06-25 05:45:09] 2024-06-25 03:44:48,968 | INFO     | mean x: 1719260006.0
[2024-06-25 05:45:09] 2024-06-25 03:44:48,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 05:45:09] 2024-06-25 03:44:48,968 | INFO     | mean y: 2365066.9806157355
[2024-06-25 05:45:09] 2024-06-25 03:44:48,969 | INFO     | -- intersect: -3679204928.5769234
[2024-06-25 05:45:09] 2024-06-25 03:44:48,969 | INFO     | intersect: -3679204928.5769234
[2024-06-25 05:45:09] 2024-06-25 03:44:48,969 | INFO     | chi2: 3.3236670728767965
[2024-06-25 05:45:09] 2024-06-25 03:44:48,969 | INFO     | current chi2=3.3236670728767965 (change=0.0006725888528499521 %)
[2024-06-25 05:45:09] 2024-06-25 03:44:48,970 | INFO     | right removable region: 876
[2024-06-25 05:45:09] 2024-06-25 03:44:48,970 | INFO     | model: linear, x: [1719233593.0, 1719233654.0, 1719233715.0, 1719233776.0, 1719233837.0, 1719233898.0, 1719233959.0, 1719234020.0, 1719234081.0, 1719234142.0, 1719
[2024-06-25 05:45:09] 2024-06-25 03:44:48,970 | INFO     | sum of square deviations: 209159039798.0
[2024-06-25 05:45:09] 2024-06-25 03:44:48,980 | INFO     | sum of deviations: 254218439095.00003
[2024-06-25 05:45:09] 2024-06-25 03:44:48,981 | INFO     | mean x: 1719260311.0
[2024-06-25 05:45:09] 2024-06-25 03:44:48,981 | INFO     | mean y: 2373529.2006841507
[2024-06-25 05:45:09] 2024-06-25 03:44:48,981 | INFO     | -- intersect: -2087269228.2078032
[2024-06-25 05:45:09] 2024-06-25 03:44:48,981 | INFO     | intersect: -2087269228.2078032
[2024-06-25 05:45:09] 2024-06-25 03:44:48,982 | INFO     | chi2: 1.1941072842850788
[2024-06-25 05:45:09] 2024-06-25 03:44:48,982 | INFO     | current chi2=1.1941072842850788 (change=64.07283802288168 %)
[2024-06-25 05:45:09] 2024-06-25 03:44:48,982 | INFO     | model: linear, x: [1719233898.0, 1719233959.0, 1719234020.0, 1719234081.0, 1719234142.0, 1719234203.0, 1719234264.0, 1719234325.0, 1719234386.0, 1719234447.0, 1719
[2024-06-25 05:45:09] 2024-06-25 03:44:48,982 | INFO     | sum of square deviations: 205601987058.0
[2024-06-25 05:45:09] 2024-06-25 03:44:48,992 | INFO     | sum of deviations: 108517093749.99998
[2024-06-25 05:45:09] 2024-06-25 03:44:48,993 | INFO     | mean x: 1719260463.5
[2024-06-25 05:45:09] 2024-06-25 03:44:48,993 | INFO     | mean y: 2379775.660550459
[2024-06-25 05:45:09] 2024-06-25 03:44:48,993 | INFO     | -- intersect: -905048948.973648
[2024-06-25 05:45:09] 2024-06-25 03:44:48,993 | INFO     | intersect: -905048948.973648
[2024-06-25 05:45:09] 2024-06-25 03:44:48,993 | INFO     | chi2: 0.14857342441737978
[2024-06-25 05:45:09] 2024-06-25 03:44:48,994 | INFO     | current chi2=0.14857342441737978 (change=87.55778259016887 %)
[2024-06-25 05:45:09] 2024-06-25 03:44:48,994 | INFO     | model: linear, x: [1719234203.0, 1719234264.0, 1719234325.0, 1719234386.0, 1719234447.0, 1719234508.0, 1719234569.0, 1719234630.0, 1719234691.0, 1719234752.0, 1719
[2024-06-25 05:45:09] 2024-06-25 03:44:48,994 | INFO     | sum of square deviations: 202085493218.0
[2024-06-25 05:45:09] 2024-06-25 03:44:49,004 | INFO     | sum of deviations: 97050647114.99997
[2024-06-25 05:45:09] 2024-06-25 03:44:49,005 | INFO     | mean x: 1719260616.0
[2024-06-25 05:45:09] 2024-06-25 03:44:49,005 | INFO     | mean y: 2380269.967704729
[2024-06-25 05:45:09] 2024-06-25 03:44:49,005 | INFO     | -- intersect: -823286890.4263272
[2024-06-25 05:45:09] 2024-06-25 03:44:49,005 | INFO     | intersect: -823286890.4263272
[2024-06-25 05:45:09] 2024-06-25 03:44:49,005 | INFO     | chi2: 0.11527784316936451
[2024-06-25 05:45:09] 2024-06-25 03:44:49,005 | INFO     | current chi2=0.11527784316936451 (change=22.41018632947416 %)
[2024-06-25 05:45:09] 2024-06-25 03:44:49,006 | INFO     | left removable region: 30
[2024-06-25 05:45:09] 2024-06-25 03:44:49,006 | INFO     | model: linear, x: [1719235118.0, 1719235179.0, 1719235240.0, 1719235301.0, 1719235362.0, 1719235423.0, 1719235484.0, 1719235545.0, 1719235606.0, 1719235667.0, 1719
[2024-06-25 05:45:09] 2024-06-25 03:44:49,006 | INFO     | sum of square deviations: 187753873807.5
[2024-06-25 05:45:09] 2024-06-25 03:44:49,016 | INFO     | sum of deviations: 154027364482.00006
[2024-06-25 05:45:09] 2024-06-25 03:44:49,016 | INFO     | mean x: 1719260890.5
[2024-06-25 05:45:09] 2024-06-25 03:44:49,016 | INFO     | mean y: 2377601.803782506
[2024-06-25 05:45:09] 2024-06-25 03:44:49,016 | INFO     | -- intersect: -1408049882.0637343
[2024-06-25 05:45:09] 2024-06-25 03:44:49,016 | INFO     | intersect: -1408049882.0637343
[2024-06-25 05:45:09] 2024-06-25 03:44:49,017 | INFO     | chi2: 0.01601088914892709
[2024-06-25 05:45:09] 2024-06-25 03:44:49,017 | INFO     | -- intersect: -1408049882.0637343
[2024-06-25 05:45:09] 2024-06-25 03:44:49,017 | INFO     | current memory leak: 0.82 B/s (using 846 data points, chi2=0.02)
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | ..............................
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | . Timing measurements:
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | . get job = 0 s
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | . initial setup = 1 s
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | . payload setup = 5 s
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | . stage-in = 0 s
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | . payload execution = 53795 s
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | . stage-out = 1 s
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | . log creation = 0 s
[2024-06-25 05:45:09] 2024-06-25 03:44:49,018 | INFO     | ..............................
[2024-06-25 05:45:09] 2024-06-25 03:44:49,076 | INFO     | 
[2024-06-25 05:45:09] 2024-06-25 03:44:49,076 | INFO     | job summary report
[2024-06-25 05:45:09] 2024-06-25 03:44:49,076 | INFO     | --------------------------------------------------
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | PanDA job id: 6238831448
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | task id: 38921013
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | errors: (none)
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | pilot state: finished 
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | transexitcode: 0
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | exeerrorcode: 0
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | exeerrordiag: 
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | exitcode: 0
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | exitmsg: OK
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | cpuconsumptiontime: 206003 s
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | nevents: 400
[2024-06-25 05:45:09] 2024-06-25 03:44:49,077 | INFO     | neventsw: 0
[2024-06-25 05:45:09] 2024-06-25 03:44:49,078 | INFO     | pid: 177362
[2024-06-25 05:45:09] 2024-06-25 03:44:49,078 | INFO     | pgrp: 177362
[2024-06-25 05:45:09] 2024-06-25 03:44:49,078 | INFO     | corecount: 4
[2024-06-25 05:45:09] 2024-06-25 03:44:49,078 | INFO     | event service: False
[2024-06-25 05:45:09] 2024-06-25 03:44:49,078 | INFO     | sizes: {0: 2386898, 1: 2387097, 5: 2387303, 11: 2387331, 53803: 2436125, 53805: 2445105, 53806: 2445289, 53812: 2445459}
[2024-06-25 05:45:09] 2024-06-25 03:44:49,078 | INFO     | --------------------------------------------------
[2024-06-25 05:45:09] 2024-06-25 03:44:49,078 | INFO     | 
[2024-06-25 05:45:09] 2024-06-25 03:44:49,078 | INFO     | executing command: ls -lF /scratch/boinc/var/slot4/slots/0
[2024-06-25 05:45:09] 2024-06-25 03:44:49,094 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,095 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,095 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,095 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,097 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-25 05:45:09] 2024-06-25 03:44:49,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,098 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-25 05:45:09] 2024-06-25 03:44:49,098 | INFO     | job 6238831448 has completed (purged errors)
[2024-06-25 05:45:09] 2024-06-25 03:44:49,098 | INFO     | overall cleanup function is called
[2024-06-25 05:45:09] 2024-06-25 03:44:50,105 | INFO     | --- collectZombieJob: --- 10, [177362]
[2024-06-25 05:45:09] 2024-06-25 03:44:50,105 | INFO     | zombie collector waiting for pid 177362
[2024-06-25 05:45:09] 2024-06-25 03:44:50,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-25 05:45:09] 2024-06-25 03:44:51,110 | INFO     | collected zombie processes
[2024-06-25 05:45:09] 2024-06-25 03:44:51,110 | INFO     | will now attempt to kill all subprocesses of pid=177362
[2024-06-25 05:45:09] 2024-06-25 03:44:51,199 | INFO     | process IDs to be killed: [177362] (in reverse order)
[2024-06-25 05:45:09] 2024-06-25 03:44:51,259 | WARNING  | found no corresponding commands to process id(s)
[2024-06-25 05:45:09] 2024-06-25 03:44:51,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-25 05:45:09] 2024-06-25 03:44:51,263 | INFO     | did not find any defunct processes belonging to 177362
[2024-06-25 05:45:09] 2024-06-25 03:44:51,266 | INFO     | did not find any defunct processes belonging to 177362
[2024-06-25 05:45:09] 2024-06-25 03:44:51,266 | INFO     | ready for new job
[2024-06-25 05:45:09] 2024-06-25 03:44:51,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-25 05:45:09] 2024-06-25 03:44:51,269 | INFO     | *************************************
[2024-06-25 05:45:09] 2024-06-25 03:44:51,269 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-25 05:45:09] 2024-06-25 03:44:51,269 | INFO     | *************************************
[2024-06-25 05:45:09] 2024-06-25 03:44:51,269 | INFO     | 
[2024-06-25 05:45:09] 2024-06-25 03:44:51,271 | INFO     | architecture information:
[2024-06-25 05:45:09] 2024-06-25 03:44:51,271 | INFO     | executing command: cat /etc/os-release
[2024-06-25 05:45:09] 2024-06-25 03:44:51,281 | INFO     | cat /etc/os-release:
[2024-06-25 05:45:09] NAME="CentOS Linux"
[2024-06-25 05:45:09] VERSION="7 (Core)"
[2024-06-25 05:45:09] ID="centos"
[2024-06-25 05:45:09] ID_LIKE="rhel fedora"
[2024-06-25 05:45:09] VERSION_ID="7"
[2024-06-25 05:45:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-25 05:45:09] ANSI_COLOR="0;31"
[2024-06-25 05:45:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-25 05:45:09] HOME_URL="https://www.centos.org/"
[2024-06-25 05:45:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-25 05:45:09] 
[2024-06-25 05:45:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-25 05:45:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-25 05:45:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-25 05:45:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-25 05:45:09] 
[2024-06-25 05:45:09] 2024-06-25 03:44:51,281 | INFO     | *************************************
[2024-06-25 05:45:09] 2024-06-25 03:44:51,783 | INFO     | executing command: df -mP /scratch/boinc/var/slot4/slots/0
[2024-06-25 05:45:09] 2024-06-25 03:44:51,802 | INFO     | sufficient remaining disk space (1685218918400 B)
[2024-06-25 05:45:09] 2024-06-25 03:44:51,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-25 05:45:09] 2024-06-25 03:44:51,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-25 05:45:09] 2024-06-25 03:44:51,803 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-25 05:45:09] 2024-06-25 03:44:51,803 | INFO     | found 0 job(s) in 20 queues
[2024-06-25 05:45:09] 2024-06-25 03:44:51,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-25 05:45:09] 2024-06-25 03:44:51,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-25 05:45:09] 2024-06-25 03:44:51,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-25 05:45:09] 2024-06-25 03:44:52,096 | INFO     | all payload control threads have been joined
[2024-06-25 05:45:09] 2024-06-25 03:44:52,111 | INFO     | all data control threads have been joined
[2024-06-25 05:45:09] 2024-06-25 03:44:52,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-25 05:45:09] 2024-06-25 03:44:52,476 | INFO     | aborting loop
[2024-06-25 05:45:09] 2024-06-25 03:44:52,807 | INFO     | [job] retrieve thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:52,922 | INFO     | [data] copytool_in thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:52,990 | INFO     | [payload] execute_payloads thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:53,101 | INFO     | [payload] control thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:53,116 | INFO     | [data] control thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:53,252 | INFO     | [payload] validate_pre thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:53,420 | INFO     | all job control threads have been joined
[2024-06-25 05:45:09] 2024-06-25 03:44:53,481 | INFO     | [job] job monitor thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:53,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-25 05:45:09] 2024-06-25 03:44:53,683 | INFO     | [job] validate thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:53,761 | INFO     | [job] create_data_payload thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:53,869 | INFO     | [data] copytool_out thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:53,870 | INFO     | [payload] validate_post thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:54,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-25 05:45:09] 2024-06-25 03:44:54,292 | INFO     | [payload] failed_post thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:54,425 | INFO     | [job] control thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:55,092 | INFO     | [job] queue monitor thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:44:57,525 | INFO     | [data] queue_monitor thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:45:02,138 | INFO     | job.realtimelogging is not enabled
[2024-06-25 05:45:09] 2024-06-25 03:45:03,143 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-25 05:45:09] 2024-06-25 03:45:03,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47952669353024)>', '<ExcThread(monitor, started 47952919811840)>']
[2024-06-25 05:45:09] 2024-06-25 03:45:03,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-25 05:45:09] 2024-06-25 03:45:03,859 | INFO     | [monitor] control thread has ended
[2024-06-25 05:45:09] 2024-06-25 03:45:08,374 | INFO     | all workflow threads have been joined
[2024-06-25 05:45:09] 2024-06-25 03:45:08,374 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-25 05:45:09] 2024-06-25 03:45:08,374 | INFO     | traces error code: 0
[2024-06-25 05:45:09] 2024-06-25 03:45:08,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-25 05:45:09] 2024-06-25 03:45:08,450 [wrapper] ==== pilot stdout END ====
[2024-06-25 05:45:09] 2024-06-25 03:45:08,452 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-25 05:45:09] 2024-06-25 03:45:08,454 [wrapper] pilotpid: 170503
[2024-06-25 05:45:09] 2024-06-25 03:45:08,456 [wrapper] Pilot exit status: 0
[2024-06-25 05:45:09] 2024-06-25 03:45:08,463 [wrapper] pandaids: 6238831448
[2024-06-25 05:45:09] 2024-06-25 03:45:08,516 [wrapper] cleanup supervisor_pilot 1537207 170504
[2024-06-25 05:45:09] 2024-06-25 03:45:08,518 [wrapper] Test setup, not cleaning
[2024-06-25 05:45:09] 2024-06-25 03:45:08,520 [wrapper] ==== wrapper stdout END ====
[2024-06-25 05:45:09] 2024-06-25 03:45:08,522 [wrapper] ==== wrapper stderr END ====
[2024-06-25 05:45:09] 2024-06-25 03:45:08,526 [wrapper] apfmon messages muted
[2024-06-25 05:45:09]  *** Error codes and diagnostics ***
[2024-06-25 05:45:09]     "exeErrorCode": 0,
[2024-06-25 05:45:09]     "exeErrorDiag": "",
[2024-06-25 05:45:09]     "pilotErrorCode": 0,
[2024-06-25 05:45:09]     "pilotErrorDiag": "",
[2024-06-25 05:45:09]  *** Listing of results directory ***
[2024-06-25 05:45:09] total 888636
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:05 queuedata.json
[2024-06-25 05:45:09] -rwx------ 1 boinc boinc     32308 Jun 20 11:06 runpilot2-wrapper.sh
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc       100 Jun 24 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-25 05:45:09] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 13:46 run_atlas
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc       105 Jun 24 13:46 job.xml
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc      6450 Jun 24 14:47 init_data.xml
[2024-06-25 05:45:09] -rw-r--r-- 2 boinc boinc 543749754 Jun 24 14:47 EVNT.38776210._000658.pool.root.1
[2024-06-25 05:45:09] -rw-r--r-- 2 boinc boinc     17537 Jun 24 14:47 start_atlas.sh
[2024-06-25 05:45:09] drwxrwx--x 2 boinc boinc      4096 Jun 24 14:47 shared
[2024-06-25 05:45:09] -rw-r--r-- 2 boinc boinc    482523 Jun 24 14:47 input.tar.gz
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc         0 Jun 24 14:47 boinc_lockfile
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc      2645 Jun 24 14:47 pandaJob.out
[2024-06-25 05:45:09] -rw------- 1 boinc boinc       424 Jun 24 14:47 setup.sh.local
[2024-06-25 05:45:09] -rw------- 1 boinc boinc   1017798 Jun 24 14:47 agis_schedconf.cvmfs.json
[2024-06-25 05:45:09] -rw------- 1 boinc boinc   1321363 Jun 24 14:47 cric_ddmendpoints.json
[2024-06-25 05:45:09] drwx------ 4 boinc boinc      4096 Jun 24 14:47 pilot3
[2024-06-25 05:45:09] -rw------- 1 boinc boinc        95 Jun 25 05:43 pilot_heartbeat.json
[2024-06-25 05:45:09] -rw------- 1 boinc boinc 347815566 Jun 25 05:43 HITS.38921013._050173.pool.root.1
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc       533 Jun 25 05:44 boinc_task_state.xml
[2024-06-25 05:45:09] -rw------- 1 boinc boinc      1044 Jun 25 05:44 memory_monitor_summary.json
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc      8192 Jun 25 05:44 boinc_mmap_file
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc        29 Jun 25 05:44 wrapper_checkpoint.txt
[2024-06-25 05:45:09] -rw------- 1 boinc boinc         0 Jun 25 05:44 agis_ddmendpoints.agis.ALL.json
[2024-06-25 05:45:09] -rw------- 1 boinc boinc    798709 Jun 25 05:44 log.38921013._050173.job.log.tgz.1
[2024-06-25 05:45:09] -rw------- 1 boinc boinc      7768 Jun 25 05:44 heartbeat.json
[2024-06-25 05:45:09] -rw------- 1 boinc boinc      4416 Jun 25 05:45 pilotlog.txt
[2024-06-25 05:45:09] -rw------- 1 boinc boinc   6638965 Jun 25 05:45 log.38921013._050173.job.log.1
[2024-06-25 05:45:09] -rw------- 1 boinc boinc       357 Jun 25 05:45 output.list
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc       620 Jun 25 05:45 runtime_log
[2024-06-25 05:45:09] -rw------- 1 boinc boinc   7454720 Jun 25 05:45 result.tar.gz
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc     11391 Jun 25 05:45 runtime_log.err
[2024-06-25 05:45:09] -rw------- 1 boinc boinc       662 Jun 25 05:45 q3mMDmBvSe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmB2kKDmFQ4gUm.diag
[2024-06-25 05:45:09] -rw-r--r-- 1 boinc boinc     21418 Jun 25 05:45 stderr.txt
[2024-06-25 05:45:09] HITS file was successfully produced:
[2024-06-25 05:45:09] -rw------- 1 boinc boinc 347815566 Jun 25 05:43 shared/HITS.pool.root.1
[2024-06-25 05:45:09]  *** Contents of shared directory: ***
[2024-06-25 05:45:09] total 878452
[2024-06-25 05:45:09] -rw-r--r-- 2 boinc boinc 543749754 Jun 24 14:47 ATLAS.root_0
[2024-06-25 05:45:09] -rw-r--r-- 2 boinc boinc     17537 Jun 24 14:47 start_atlas.sh
[2024-06-25 05:45:09] -rw-r--r-- 2 boinc boinc    482523 Jun 24 14:47 input.tar.gz
[2024-06-25 05:45:09] -rw------- 1 boinc boinc 347815566 Jun 25 05:43 HITS.pool.root.1
[2024-06-25 05:45:09] -rw------- 1 boinc boinc   7454720 Jun 25 05:45 result.tar.gz
05:45:11 (165957): run_atlas exited; CPU time 205561.726855
05:45:11 (165957): called boinc_finish(0)

</stderr_txt>
]]>

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