Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:40:42 (997912): wrapper (7.7.26015): starting
03:40:42 (997912): wrapper: running run_atlas (--nthreads 4)
[2024-06-25 03:40:42] Arguments: --nthreads 4
[2024-06-25 03:40:42] Threads: 4
[2024-06-25 03:40:42] Checking for CVMFS
[2024-06-25 03:40:42] No cvmfs_config command found, will try listing directly
[2024-06-25 03:40:42] CVMFS is ok
[2024-06-25 03:40:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-25 03:40:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-25 03:40:42] Further information can be found at the LHC@home message board.
[2024-06-25 03:40:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-25 03:40:42] Checking for apptainer binary...
[2024-06-25 03:40:42] which: no apptainer in ((null))
[2024-06-25 03:40:42] apptainer is not installed, using version from CVMFS
[2024-06-25 03:40:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-25 03:40:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-25 03:40:43] apptainer works
[2024-06-25 03:40:43] Set ATHENA_PROC_NUMBER=4
[2024-06-25 03:40:43] Set ATHENA_CORE_NUMBER=4
[2024-06-25 03:40:43] Starting ATLAS job with PandaID=6238830026
[2024-06-25 03:40:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-25 18:28:14]  *** The last 200 lines of the pilot log: ***
[2024-06-25 18:28:14] 2024-06-25 16:27:58,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-25 18:28:14] 2024-06-25 16:27:58,744 | INFO     | fitting pss+swap vs Time
[2024-06-25 18:28:14] 2024-06-25 16:27:58,745 | INFO     | model: linear, x: [1719279681.0, 1719279742.0, 1719279803.0, 1719279864.0, 1719279925.0, 1719279986.0, 1719280047.0, 1719280108.0, 1719280169.0, 1719280230.0, 1719
[2024-06-25 18:28:14] 2024-06-25 16:27:58,745 | INFO     | sum of square deviations: 205601987058.0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,764 | INFO     | sum of deviations: 386844930888.49994
[2024-06-25 18:28:14] 2024-06-25 16:27:58,764 | INFO     | mean x: 1719306246.5
[2024-06-25 18:28:14] 2024-06-25 16:27:58,764 | INFO     | mean y: 2365656.4323394494
[2024-06-25 18:28:14] 2024-06-25 16:27:58,764 | INFO     | -- intersect: -3232549120.514022
[2024-06-25 18:28:14] 2024-06-25 16:27:58,764 | INFO     | intersect: -3232549120.514022
[2024-06-25 18:28:14] 2024-06-25 16:27:58,766 | INFO     | chi2: 3.481913806185523
[2024-06-25 18:28:14] 2024-06-25 16:27:58,767 | INFO     | model: linear, x: [1719279681.0, 1719279742.0, 1719279803.0, 1719279864.0, 1719279925.0, 1719279986.0, 1719280047.0, 1719280108.0, 1719280169.0, 1719280230.0, 1719
[2024-06-25 18:28:14] 2024-06-25 16:27:58,767 | INFO     | sum of square deviations: 202085493218.0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,785 | INFO     | sum of deviations: 384009021216.00006
[2024-06-25 18:28:14] 2024-06-25 16:27:58,786 | INFO     | mean x: 1719306094.0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,786 | INFO     | mean y: 2365533.4475201843
[2024-06-25 18:28:14] 2024-06-25 16:27:58,786 | INFO     | -- intersect: -3264712374.0963984
[2024-06-25 18:28:14] 2024-06-25 16:27:58,786 | INFO     | intersect: -3264712374.0963984
[2024-06-25 18:28:14] 2024-06-25 16:27:58,787 | INFO     | chi2: 3.4820972962335976
[2024-06-25 18:28:14] 2024-06-25 16:27:58,787 | INFO     | current chi2=3.4820972962335976 (change=-0.0052698044319438725 %)
[2024-06-25 18:28:14] 2024-06-25 16:27:58,788 | INFO     | right removable region: 866
[2024-06-25 18:28:14] 2024-06-25 16:27:58,788 | INFO     | model: linear, x: [1719279986.0, 1719280047.0, 1719280108.0, 1719280169.0, 1719280230.0, 1719280291.0, 1719280352.0, 1719280413.0, 1719280474.0, 1719280535.0, 1719
[2024-06-25 18:28:14] 2024-06-25 16:27:58,789 | INFO     | sum of square deviations: 202085493218.0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,807 | INFO     | sum of deviations: 187130113518.99994
[2024-06-25 18:28:14] 2024-06-25 16:27:58,807 | INFO     | mean x: 1719306399.0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,808 | INFO     | mean y: 2374310.0911188005
[2024-06-25 18:28:14] 2024-06-25 16:27:58,808 | INFO     | -- intersect: -1589694454.9426088
[2024-06-25 18:28:14] 2024-06-25 16:27:58,808 | INFO     | intersect: -1589694454.9426088
[2024-06-25 18:28:14] 2024-06-25 16:27:58,809 | INFO     | chi2: 1.2491470076629352
[2024-06-25 18:28:14] 2024-06-25 16:27:58,809 | INFO     | current chi2=1.2491470076629352 (change=64.12470046088274 %)
[2024-06-25 18:28:14] 2024-06-25 16:27:58,810 | INFO     | model: linear, x: [1719280291.0, 1719280352.0, 1719280413.0, 1719280474.0, 1719280535.0, 1719280596.0, 1719280657.0, 1719280718.0, 1719280779.0, 1719280840.0, 1719
[2024-06-25 18:28:14] 2024-06-25 16:27:58,811 | INFO     | sum of square deviations: 198609325715.5
[2024-06-25 18:28:14] 2024-06-25 16:27:58,829 | INFO     | sum of deviations: 42912266061.49996
[2024-06-25 18:28:14] 2024-06-25 16:27:58,829 | INFO     | mean x: 1719306551.5
[2024-06-25 18:28:14] 2024-06-25 16:27:58,829 | INFO     | mean y: 2380636.8039443158
[2024-06-25 18:28:14] 2024-06-25 16:27:58,829 | INFO     | -- intersect: -369099100.682975
[2024-06-25 18:28:14] 2024-06-25 16:27:58,829 | INFO     | intersect: -369099100.682975
[2024-06-25 18:28:14] 2024-06-25 16:27:58,831 | INFO     | chi2: 0.191558636215336
[2024-06-25 18:28:14] 2024-06-25 16:27:58,831 | INFO     | current chi2=0.191558636215336 (change=84.66484448666066 %)
[2024-06-25 18:28:14] 2024-06-25 16:27:58,832 | INFO     | model: linear, x: [1719280596.0, 1719280657.0, 1719280718.0, 1719280779.0, 1719280840.0, 1719280901.0, 1719280962.0, 1719281023.0, 1719281084.0, 1719281145.0, 1719
[2024-06-25 18:28:14] 2024-06-25 16:27:58,832 | INFO     | sum of square deviations: 195173251988.0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,849 | INFO     | sum of deviations: 30626067540.99999
[2024-06-25 18:28:14] 2024-06-25 16:27:58,849 | INFO     | mean x: 1719306704.0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,850 | INFO     | mean y: 2381179.0350058344
[2024-06-25 18:28:14] 2024-06-25 16:27:58,853 | WARNING  | process 1009036 is no longer using CPU - aborting
[2024-06-25 18:28:14] 2024-06-25 16:27:58,853 | INFO     | -- intersect: -267407855.59990177
[2024-06-25 18:28:14] 2024-06-25 16:27:58,853 | INFO     | intersect: -267407855.59990177
[2024-06-25 18:28:14] 2024-06-25 16:27:58,854 | INFO     | chi2: 0.15598868567116708
[2024-06-25 18:28:14] 2024-06-25 16:27:58,854 | INFO     | current chi2=0.15598868567116708 (change=18.56870107604223 %)
[2024-06-25 18:28:14] 2024-06-25 16:27:58,854 | INFO     | left removable region: 30
[2024-06-25 18:28:14] 2024-06-25 16:27:58,855 | INFO     | model: linear, x: [1719281511.0, 1719281572.0, 1719281633.0, 1719281694.0, 1719281755.0, 1719281816.0, 1719281877.0, 1719281938.0, 1719281999.0, 1719282060.0, 1719
[2024-06-25 18:28:14] 2024-06-25 16:27:58,855 | INFO     | sum of square deviations: 181174317885.0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,865 | INFO     | sum of deviations: 101994529578.5
[2024-06-25 18:28:14] 2024-06-25 16:27:58,865 | INFO     | mean x: 1719306978.5
[2024-06-25 18:28:14] 2024-06-25 16:27:58,865 | INFO     | mean y: 2377799.321770335
[2024-06-25 18:28:14] 2024-06-25 16:27:58,865 | INFO     | -- intersect: -965529288.8365471
[2024-06-25 18:28:14] 2024-06-25 16:27:58,865 | INFO     | intersect: -965529288.8365471
[2024-06-25 18:28:14] 2024-06-25 16:27:58,866 | INFO     | chi2: 0.04506346195583673
[2024-06-25 18:28:14] 2024-06-25 16:27:58,866 | INFO     | -- intersect: -965529288.8365471
[2024-06-25 18:28:14] 2024-06-25 16:27:58,866 | INFO     | current memory leak: 0.56 B/s (using 836 data points, chi2=0.05)
[2024-06-25 18:28:14] 2024-06-25 16:27:58,867 | INFO     | ..............................
[2024-06-25 18:28:14] 2024-06-25 16:27:58,867 | INFO     | . Timing measurements:
[2024-06-25 18:28:14] 2024-06-25 16:27:58,867 | INFO     | . get job = 0 s
[2024-06-25 18:28:14] 2024-06-25 16:27:58,867 | INFO     | . initial setup = 1 s
[2024-06-25 18:28:14] 2024-06-25 16:27:58,867 | INFO     | . payload setup = 5 s
[2024-06-25 18:28:14] 2024-06-25 16:27:58,867 | INFO     | . stage-in = 0 s
[2024-06-25 18:28:14] 2024-06-25 16:27:58,867 | INFO     | . payload execution = 53193 s
[2024-06-25 18:28:14] 2024-06-25 16:27:58,868 | INFO     | . stage-out = 1 s
[2024-06-25 18:28:14] 2024-06-25 16:27:58,868 | INFO     | . log creation = 0 s
[2024-06-25 18:28:14] 2024-06-25 16:27:58,868 | INFO     | ..............................
[2024-06-25 18:28:14] 2024-06-25 16:27:58,927 | INFO     | 
[2024-06-25 18:28:14] 2024-06-25 16:27:58,927 | INFO     | job summary report
[2024-06-25 18:28:14] 2024-06-25 16:27:58,927 | INFO     | --------------------------------------------------
[2024-06-25 18:28:14] 2024-06-25 16:27:58,927 | INFO     | PanDA job id: 6238830026
[2024-06-25 18:28:14] 2024-06-25 16:27:58,927 | INFO     | task id: 38921013
[2024-06-25 18:28:14] 2024-06-25 16:27:58,928 | INFO     | errors: (none)
[2024-06-25 18:28:14] 2024-06-25 16:27:58,928 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-25 18:28:14] 2024-06-25 16:27:58,928 | INFO     | pilot state: finished 
[2024-06-25 18:28:14] 2024-06-25 16:27:58,928 | INFO     | transexitcode: 0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,928 | INFO     | exeerrorcode: 0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,928 | INFO     | exeerrordiag: 
[2024-06-25 18:28:14] 2024-06-25 16:27:58,929 | INFO     | exitcode: 0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,929 | INFO     | exitmsg: OK
[2024-06-25 18:28:14] 2024-06-25 16:27:58,929 | INFO     | cpuconsumptiontime: 207441 s
[2024-06-25 18:28:14] 2024-06-25 16:27:58,929 | INFO     | nevents: 400
[2024-06-25 18:28:14] 2024-06-25 16:27:58,929 | INFO     | neventsw: 0
[2024-06-25 18:28:14] 2024-06-25 16:27:58,929 | INFO     | pid: 1009036
[2024-06-25 18:28:14] 2024-06-25 16:27:58,930 | INFO     | pgrp: 1009036
[2024-06-25 18:28:14] 2024-06-25 16:27:58,930 | INFO     | corecount: 4
[2024-06-25 18:28:14] 2024-06-25 16:27:58,930 | INFO     | event service: False
[2024-06-25 18:28:14] 2024-06-25 16:27:58,930 | INFO     | sizes: {0: 2387093, 5: 2387299, 11: 2387355, 53203: 2435503, 53204: 2444541, 53209: 2444655}
[2024-06-25 18:28:14] 2024-06-25 16:27:58,930 | INFO     | --------------------------------------------------
[2024-06-25 18:28:14] 2024-06-25 16:27:58,930 | INFO     | 
[2024-06-25 18:28:14] 2024-06-25 16:27:58,931 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-06-25 18:28:14] 2024-06-25 16:27:58,947 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,947 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,947 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,947 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,950 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-25 18:28:14] 2024-06-25 16:27:58,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,950 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-25 18:28:14] 2024-06-25 16:27:58,950 | INFO     | job 6238830026 has completed (purged errors)
[2024-06-25 18:28:14] 2024-06-25 16:27:58,951 | INFO     | overall cleanup function is called
[2024-06-25 18:28:14] 2024-06-25 16:27:59,958 | INFO     | --- collectZombieJob: --- 10, [1009036]
[2024-06-25 18:28:14] 2024-06-25 16:27:59,959 | INFO     | zombie collector waiting for pid 1009036
[2024-06-25 18:28:14] 2024-06-25 16:27:59,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-25 18:28:14] 2024-06-25 16:28:00,964 | INFO     | collected zombie processes
[2024-06-25 18:28:14] 2024-06-25 16:28:00,964 | INFO     | will now attempt to kill all subprocesses of pid=1009036
[2024-06-25 18:28:14] 2024-06-25 16:28:01,068 | INFO     | process IDs to be killed: [1009036] (in reverse order)
[2024-06-25 18:28:14] 2024-06-25 16:28:01,132 | WARNING  | found no corresponding commands to process id(s)
[2024-06-25 18:28:14] 2024-06-25 16:28:01,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-25 18:28:14] 2024-06-25 16:28:01,136 | INFO     | did not find any defunct processes belonging to 1009036
[2024-06-25 18:28:14] 2024-06-25 16:28:01,139 | INFO     | did not find any defunct processes belonging to 1009036
[2024-06-25 18:28:14] 2024-06-25 16:28:01,139 | INFO     | ready for new job
[2024-06-25 18:28:14] 2024-06-25 16:28:01,140 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-25 18:28:14] 2024-06-25 16:28:01,142 | INFO     | *************************************
[2024-06-25 18:28:14] 2024-06-25 16:28:01,142 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-25 18:28:14] 2024-06-25 16:28:01,142 | INFO     | *************************************
[2024-06-25 18:28:14] 2024-06-25 16:28:01,142 | INFO     | 
[2024-06-25 18:28:14] 2024-06-25 16:28:01,144 | INFO     | architecture information:
[2024-06-25 18:28:14] 2024-06-25 16:28:01,144 | INFO     | executing command: cat /etc/os-release
[2024-06-25 18:28:14] 2024-06-25 16:28:01,153 | INFO     | cat /etc/os-release:
[2024-06-25 18:28:14] NAME="CentOS Linux"
[2024-06-25 18:28:14] VERSION="7 (Core)"
[2024-06-25 18:28:14] ID="centos"
[2024-06-25 18:28:14] ID_LIKE="rhel fedora"
[2024-06-25 18:28:14] VERSION_ID="7"
[2024-06-25 18:28:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-25 18:28:14] ANSI_COLOR="0;31"
[2024-06-25 18:28:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-25 18:28:14] HOME_URL="https://www.centos.org/"
[2024-06-25 18:28:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-25 18:28:14] 
[2024-06-25 18:28:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-25 18:28:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-25 18:28:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-25 18:28:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-25 18:28:14] 
[2024-06-25 18:28:14] 2024-06-25 16:28:01,153 | INFO     | *************************************
[2024-06-25 18:28:14] 2024-06-25 16:28:01,656 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-06-25 18:28:14] 2024-06-25 16:28:01,674 | INFO     | sufficient remaining disk space (1687674683392 B)
[2024-06-25 18:28:14] 2024-06-25 16:28:01,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-25 18:28:14] 2024-06-25 16:28:01,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-25 18:28:14] 2024-06-25 16:28:01,675 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-25 18:28:14] 2024-06-25 16:28:01,676 | INFO     | found 0 job(s) in 20 queues
[2024-06-25 18:28:14] 2024-06-25 16:28:01,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-25 18:28:14] 2024-06-25 16:28:01,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-25 18:28:14] 2024-06-25 16:28:01,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-25 18:28:14] 2024-06-25 16:28:02,185 | INFO     | all data control threads have been joined
[2024-06-25 18:28:14] 2024-06-25 16:28:02,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-25 18:28:14] 2024-06-25 16:28:02,361 | INFO     | aborting loop
[2024-06-25 18:28:14] 2024-06-25 16:28:02,679 | INFO     | [job] retrieve thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:02,764 | INFO     | [data] copytool_in thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:02,805 | INFO     | all job control threads have been joined
[2024-06-25 18:28:14] 2024-06-25 16:28:03,144 | INFO     | all payload control threads have been joined
[2024-06-25 18:28:14] 2024-06-25 16:28:03,190 | INFO     | [data] control thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,215 | INFO     | [job] create_data_payload thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,267 | INFO     | [payload] validate_post thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,338 | INFO     | [job] validate thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,365 | INFO     | [job] job monitor thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,576 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,734 | INFO     | [payload] validate_pre thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,743 | INFO     | [payload] failed_post thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,810 | INFO     | [job] control thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,908 | INFO     | [data] copytool_out thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:03,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-25 18:28:14] 2024-06-25 16:28:04,112 | INFO     | [payload] execute_payloads thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:04,150 | INFO     | [payload] control thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:04,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-25 18:28:14] 2024-06-25 16:28:04,941 | INFO     | [job] queue monitor thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:08,458 | INFO     | [data] queue_monitor thread has finished
[2024-06-25 18:28:14] 2024-06-25 16:28:08,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47191340831808)>', '<ExcThread(monitor, started 47191527409408)>']
[2024-06-25 18:28:14] 2024-06-25 16:28:09,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-25 18:28:14] 2024-06-25 16:28:09,716 | INFO     | [monitor] control thread has ended
[2024-06-25 18:28:14] 2024-06-25 16:28:14,007 | INFO     | all workflow threads have been joined
[2024-06-25 18:28:14] 2024-06-25 16:28:14,008 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-25 18:28:14] 2024-06-25 16:28:14,008 | INFO     | traces error code: 0
[2024-06-25 18:28:14] 2024-06-25 16:28:14,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-25 18:28:14] 2024-06-25 16:28:14,137 [wrapper] ==== pilot stdout END ====
[2024-06-25 18:28:14] 2024-06-25 16:28:14,139 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-25 18:28:14] 2024-06-25 16:28:14,142 [wrapper] pilotpid: 1002145
[2024-06-25 18:28:14] 2024-06-25 16:28:14,144 [wrapper] Pilot exit status: 0
[2024-06-25 18:28:14] 2024-06-25 16:28:14,179 [wrapper] pandaids: 6238830026
[2024-06-25 18:28:14] 2024-06-25 16:28:14,239 [wrapper] cleanup supervisor_pilot 2200088 1002146
[2024-06-25 18:28:14] 2024-06-25 16:28:14,242 [wrapper] Test setup, not cleaning
[2024-06-25 18:28:14] 2024-06-25 16:28:14,244 [wrapper] ==== wrapper stdout END ====
[2024-06-25 18:28:14] 2024-06-25 16:28:14,246 [wrapper] ==== wrapper stderr END ====
[2024-06-25 18:28:14] 2024-06-25 16:28:14,249 [wrapper] apfmon messages muted
[2024-06-25 18:28:14]  *** Error codes and diagnostics ***
[2024-06-25 18:28:14]     "exeErrorCode": 0,
[2024-06-25 18:28:14]     "exeErrorDiag": "",
[2024-06-25 18:28:14]     "pilotErrorCode": 0,
[2024-06-25 18:28:14]     "pilotErrorDiag": "",
[2024-06-25 18:28:14]  *** Listing of results directory ***
[2024-06-25 18:28:15] total 889348
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-25 18:28:15] -rwx------ 1 boinc boinc     32308 Jun 20 11:05 runpilot2-wrapper.sh
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:05 queuedata.json
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc       100 Jun 25 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-25 18:28:15] -rwxr-xr-x 1 boinc boinc      7986 Jun 25 03:40 run_atlas
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc       105 Jun 25 03:40 job.xml
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc      6455 Jun 25 03:40 init_data.xml
[2024-06-25 18:28:15] -rw-r--r-- 2 boinc boinc 543488401 Jun 25 03:40 EVNT.38776210._000673.pool.root.1
[2024-06-25 18:28:15] -rw-r--r-- 2 boinc boinc     17537 Jun 25 03:40 start_atlas.sh
[2024-06-25 18:28:15] drwxrwx--x 2 boinc boinc      4096 Jun 25 03:40 shared
[2024-06-25 18:28:15] -rw-r--r-- 2 boinc boinc    482532 Jun 25 03:40 input.tar.gz
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc         0 Jun 25 03:40 boinc_lockfile
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc      2646 Jun 25 03:40 pandaJob.out
[2024-06-25 18:28:15] -rw------- 1 boinc boinc       424 Jun 25 03:40 setup.sh.local
[2024-06-25 18:28:15] -rw------- 1 boinc boinc   1022463 Jun 25 03:40 agis_schedconf.cvmfs.json
[2024-06-25 18:28:15] -rw------- 1 boinc boinc   1321363 Jun 25 03:40 cric_ddmendpoints.json
[2024-06-25 18:28:15] drwx------ 4 boinc boinc      4096 Jun 25 03:40 pilot3
[2024-06-25 18:28:15] -rw------- 1 boinc boinc        95 Jun 25 18:27 pilot_heartbeat.json
[2024-06-25 18:28:15] -rw------- 1 boinc boinc 348800189 Jun 25 18:27 HITS.38921013._050166.pool.root.1
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc       533 Jun 25 18:27 boinc_task_state.xml
[2024-06-25 18:28:15] -rw------- 1 boinc boinc      1040 Jun 25 18:27 memory_monitor_summary.json
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc      8192 Jun 25 18:27 boinc_mmap_file
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc        29 Jun 25 18:27 wrapper_checkpoint.txt
[2024-06-25 18:28:15] -rw------- 1 boinc boinc         0 Jun 25 18:27 agis_ddmendpoints.agis.ALL.json
[2024-06-25 18:28:15] -rw------- 1 boinc boinc    799390 Jun 25 18:27 log.38921013._050166.job.log.tgz.1
[2024-06-25 18:28:15] -rw------- 1 boinc boinc      7762 Jun 25 18:27 heartbeat.json
[2024-06-25 18:28:15] -rw------- 1 boinc boinc      4345 Jun 25 18:28 pilotlog.txt
[2024-06-25 18:28:15] -rw------- 1 boinc boinc   6634408 Jun 25 18:28 log.38921013._050166.job.log.1
[2024-06-25 18:28:15] -rw------- 1 boinc boinc       357 Jun 25 18:28 output.list
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc       620 Jun 25 18:28 runtime_log
[2024-06-25 18:28:15] -rw------- 1 boinc boinc   7454720 Jun 25 18:28 result.tar.gz
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc     11410 Jun 25 18:28 runtime_log.err
[2024-06-25 18:28:15] -rw------- 1 boinc boinc       661 Jun 25 18:28 OMyMDmuuSe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmz1kKDmkixO1n.diag
[2024-06-25 18:28:15] -rw-r--r-- 1 boinc boinc     21340 Jun 25 18:28 stderr.txt
[2024-06-25 18:28:15] HITS file was successfully produced:
[2024-06-25 18:28:15] -rw------- 1 boinc boinc 348800189 Jun 25 18:27 shared/HITS.pool.root.1
[2024-06-25 18:28:15]  *** Contents of shared directory: ***
[2024-06-25 18:28:15] total 879160
[2024-06-25 18:28:15] -rw-r--r-- 2 boinc boinc 543488401 Jun 25 03:40 ATLAS.root_0
[2024-06-25 18:28:15] -rw-r--r-- 2 boinc boinc     17537 Jun 25 03:40 start_atlas.sh
[2024-06-25 18:28:15] -rw-r--r-- 2 boinc boinc    482532 Jun 25 03:40 input.tar.gz
[2024-06-25 18:28:15] -rw------- 1 boinc boinc 348800189 Jun 25 18:27 HITS.pool.root.1
[2024-06-25 18:28:15] -rw------- 1 boinc boinc   7454720 Jun 25 18:28 result.tar.gz
18:28:16 (997912): run_atlas exited; CPU time 206987.057221
18:28:16 (997912): called boinc_finish(0)

</stderr_txt>
]]>

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