Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:14:36 (201681): wrapper (7.7.26015): starting
17:14:36 (201681): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 17:14:36] Arguments: --nthreads 4
[2024-06-20 17:14:36] Threads: 4
[2024-06-20 17:14:36] Checking for CVMFS
[2024-06-20 17:14:36] No cvmfs_config command found, will try listing directly
[2024-06-20 17:14:36] CVMFS is ok
[2024-06-20 17:14:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 17:14:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 17:14:36] Further information can be found at the LHC@home message board.
[2024-06-20 17:14:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 17:14:36] Checking for apptainer binary...
[2024-06-20 17:14:36] which: no apptainer in ((null))
[2024-06-20 17:14:36] apptainer is not installed, using version from CVMFS
[2024-06-20 17:14:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 17:14:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-20 17:14:37] apptainer works
[2024-06-20 17:14:37] Set ATHENA_PROC_NUMBER=4
[2024-06-20 17:14:37] Set ATHENA_CORE_NUMBER=4
[2024-06-20 17:14:37] Starting ATLAS job with PandaID=6238830028
[2024-06-20 17:14:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 07:57:33]  *** The last 200 lines of the pilot log: ***
[2024-06-21 07:57:33] 2024-06-21 05:57:12,246 | INFO     | fitting pss+swap vs Time
[2024-06-21 07:57:33] 2024-06-21 05:57:12,247 | INFO     | model: linear, x: [1718896505.0, 1718896566.0, 1718896627.0, 1718896688.0, 1718896749.0, 1718896810.0, 1718896871.0, 1718896932.0, 1718896993.0, 1718897054.0, 1718
[2024-06-21 07:57:33] 2024-06-21 05:57:12,247 | INFO     | sum of square deviations: 202785558437.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,258 | INFO     | sum of deviations: 540135677731.5001
[2024-06-21 07:57:33] 2024-06-21 05:57:12,258 | INFO     | mean x: 1718922948.5
[2024-06-21 07:57:33] 2024-06-21 05:57:12,258 | INFO     | mean y: 2350389.9458525344
[2024-06-21 07:57:33] 2024-06-21 05:57:12,258 | INFO     | -- intersect: -4576139414.320563
[2024-06-21 07:57:33] 2024-06-21 05:57:12,258 | INFO     | intersect: -4576139414.320563
[2024-06-21 07:57:33] 2024-06-21 05:57:12,259 | INFO     | chi2: 4.960497269851996
[2024-06-21 07:57:33] 2024-06-21 05:57:12,259 | INFO     | model: linear, x: [1718896505.0, 1718896566.0, 1718896627.0, 1718896688.0, 1718896749.0, 1718896810.0, 1718896871.0, 1718896932.0, 1718896993.0, 1718897054.0, 1718
[2024-06-21 07:57:33] 2024-06-21 05:57:12,260 | INFO     | sum of square deviations: 199301344272.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,267 | INFO     | monitor loop #3983: job 0:6238830028 is in state 'finished'
[2024-06-21 07:57:33] 2024-06-21 05:57:12,271 | INFO     | sum of deviations: 592494798463.0001
[2024-06-21 07:57:33] 2024-06-21 05:57:12,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,272 | INFO     | mean x: 1718922796.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,272 | INFO     | mean y: 2352670.232908459
[2024-06-21 07:57:33] 2024-06-21 05:57:12,272 | INFO     | -- intersect: -5107762463.759993
[2024-06-21 07:57:33] 2024-06-21 05:57:12,272 | INFO     | intersect: -5107762463.759993
[2024-06-21 07:57:33] 2024-06-21 05:57:12,273 | INFO     | chi2: 4.162921927233697
[2024-06-21 07:57:33] 2024-06-21 05:57:12,273 | INFO     | current chi2=4.162921927233697 (change=16.078536066649143 %)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,273 | INFO     | right removable region: 862
[2024-06-21 07:57:33] 2024-06-21 05:57:12,274 | INFO     | model: linear, x: [1718896810.0, 1718896871.0, 1718896932.0, 1718896993.0, 1718897054.0, 1718897115.0, 1718897176.0, 1718897237.0, 1718897298.0, 1718897359.0, 1718
[2024-06-21 07:57:33] 2024-06-21 05:57:12,274 | INFO     | sum of square deviations: 199301344272.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,286 | INFO     | sum of deviations: 331942599804.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,286 | INFO     | mean x: 1718923101.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,286 | INFO     | mean y: 2359496.0637311703
[2024-06-21 07:57:33] 2024-06-21 05:57:12,286 | INFO     | -- intersect: -2860560496.238877
[2024-06-21 07:57:33] 2024-06-21 05:57:12,286 | INFO     | intersect: -2860560496.238877
[2024-06-21 07:57:33] 2024-06-21 05:57:12,287 | INFO     | chi2: 2.5528305592253027
[2024-06-21 07:57:33] 2024-06-21 05:57:12,287 | INFO     | current chi2=2.5528305592253027 (change=48.53680144649147 %)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,288 | INFO     | model: linear, x: [1718897115.0, 1718897176.0, 1718897237.0, 1718897298.0, 1718897359.0, 1718897420.0, 1718897481.0, 1718897542.0, 1718897603.0, 1718897664.0, 1718
[2024-06-21 07:57:33] 2024-06-21 05:57:12,288 | INFO     | sum of square deviations: 195857270394.5
[2024-06-21 07:57:33] 2024-06-21 05:57:12,299 | INFO     | sum of deviations: 154386627337.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,299 | INFO     | mean x: 1718923253.5
[2024-06-21 07:57:33] 2024-06-21 05:57:12,299 | INFO     | mean y: 2367357.9067599066
[2024-06-21 07:57:33] 2024-06-21 05:57:12,299 | INFO     | -- intersect: -1352592625.066945
[2024-06-21 07:57:33] 2024-06-21 05:57:12,300 | INFO     | intersect: -1352592625.066945
[2024-06-21 07:57:33] 2024-06-21 05:57:12,300 | INFO     | chi2: 0.9352491014837522
[2024-06-21 07:57:33] 2024-06-21 05:57:12,300 | INFO     | current chi2=0.9352491014837522 (change=63.36423120194986 %)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,301 | INFO     | model: linear, x: [1718897420.0, 1718897481.0, 1718897542.0, 1718897603.0, 1718897664.0, 1718897725.0, 1718897786.0, 1718897847.0, 1718897908.0, 1718897969.0, 1718
[2024-06-21 07:57:33] 2024-06-21 05:57:12,301 | INFO     | sum of square deviations: 192453104242.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,312 | INFO     | sum of deviations: 111009730222.99997
[2024-06-21 07:57:33] 2024-06-21 05:57:12,312 | INFO     | mean x: 1718923406.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,312 | INFO     | mean y: 2369298.773739742
[2024-06-21 07:57:33] 2024-06-21 05:57:12,312 | INFO     | -- intersect: -989130549.0755177
[2024-06-21 07:57:33] 2024-06-21 05:57:12,312 | INFO     | intersect: -989130549.0755177
[2024-06-21 07:57:33] 2024-06-21 05:57:12,313 | INFO     | chi2: 0.8264160191000903
[2024-06-21 07:57:33] 2024-06-21 05:57:12,313 | INFO     | current chi2=0.8264160191000903 (change=11.636801597670669 %)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,313 | INFO     | left removable region: 30
[2024-06-21 07:57:33] 2024-06-21 05:57:12,313 | INFO     | model: linear, x: [1718898335.0, 1718898396.0, 1718898457.0, 1718898518.0, 1718898579.0, 1718898640.0, 1718898701.0, 1718898762.0, 1718898823.0, 1718898884.0, 1718
[2024-06-21 07:57:33] 2024-06-21 05:57:12,314 | INFO     | sum of square deviations: 178586150288.0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,324 | INFO     | sum of deviations: 138663998147.50006
[2024-06-21 07:57:33] 2024-06-21 05:57:12,324 | INFO     | mean x: 1718923680.5
[2024-06-21 07:57:33] 2024-06-21 05:57:12,324 | INFO     | mean y: 2372915.3521634615
[2024-06-21 07:57:33] 2024-06-21 05:57:12,324 | INFO     | -- intersect: -1332292900.9172516
[2024-06-21 07:57:33] 2024-06-21 05:57:12,324 | INFO     | intersect: -1332292900.9172516
[2024-06-21 07:57:33] 2024-06-21 05:57:12,325 | INFO     | chi2: 0.004396800459811811
[2024-06-21 07:57:33] 2024-06-21 05:57:12,325 | INFO     | -- intersect: -1332292900.9172516
[2024-06-21 07:57:33] 2024-06-21 05:57:12,325 | INFO     | current memory leak: 0.78 B/s (using 832 data points, chi2=0.00)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,326 | INFO     | ..............................
[2024-06-21 07:57:33] 2024-06-21 05:57:12,326 | INFO     | . Timing measurements:
[2024-06-21 07:57:33] 2024-06-21 05:57:12,326 | INFO     | . get job = 0 s
[2024-06-21 07:57:33] 2024-06-21 05:57:12,326 | INFO     | . initial setup = 1 s
[2024-06-21 07:57:33] 2024-06-21 05:57:12,326 | INFO     | . payload setup = 3 s
[2024-06-21 07:57:33] 2024-06-21 05:57:12,326 | INFO     | . stage-in = 0 s
[2024-06-21 07:57:33] 2024-06-21 05:57:12,326 | INFO     | . payload execution = 52917 s
[2024-06-21 07:57:33] 2024-06-21 05:57:12,326 | INFO     | . stage-out = 1 s
[2024-06-21 07:57:33] 2024-06-21 05:57:12,327 | INFO     | . log creation = 0 s
[2024-06-21 07:57:33] 2024-06-21 05:57:12,327 | INFO     | ..............................
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | 
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | job summary report
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | --------------------------------------------------
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | PanDA job id: 6238830028
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | task id: 38921013
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | errors: (none)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | pilot state: finished 
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | transexitcode: 0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,386 | INFO     | exeerrorcode: 0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | exeerrordiag: 
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | exitcode: 0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | exitmsg: OK
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | cpuconsumptiontime: 206800 s
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | nevents: 400
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | neventsw: 0
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | pid: 213364
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | pgrp: 213364
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | corecount: 4
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | event service: False
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | sizes: {0: 2387104, 3: 2387310, 11: 2387338, 52925: 2435345, 52926: 2444327, 52927: 2444383, 52935: 2444681}
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | --------------------------------------------------
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | 
[2024-06-21 07:57:33] 2024-06-21 05:57:12,387 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-06-21 07:57:33] 2024-06-21 05:57:12,406 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,406 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,406 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,406 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,407 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 07:57:33] 2024-06-21 05:57:12,408 | INFO     | job 6238830028 has completed (purged errors)
[2024-06-21 07:57:33] 2024-06-21 05:57:12,408 | INFO     | overall cleanup function is called
[2024-06-21 07:57:33] 2024-06-21 05:57:13,414 | INFO     | --- collectZombieJob: --- 10, [213364]
[2024-06-21 07:57:33] 2024-06-21 05:57:13,415 | INFO     | zombie collector waiting for pid 213364
[2024-06-21 07:57:33] 2024-06-21 05:57:13,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 07:57:33] 2024-06-21 05:57:14,419 | INFO     | collected zombie processes
[2024-06-21 07:57:33] 2024-06-21 05:57:14,419 | INFO     | will now attempt to kill all subprocesses of pid=213364
[2024-06-21 07:57:33] 2024-06-21 05:57:14,549 | INFO     | process IDs to be killed: [213364] (in reverse order)
[2024-06-21 07:57:33] 2024-06-21 05:57:14,613 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 07:57:33] 2024-06-21 05:57:14,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 07:57:33] 2024-06-21 05:57:14,618 | INFO     | did not find any defunct processes belonging to 213364
[2024-06-21 07:57:33] 2024-06-21 05:57:14,620 | INFO     | did not find any defunct processes belonging to 213364
[2024-06-21 07:57:33] 2024-06-21 05:57:14,621 | INFO     | ready for new job
[2024-06-21 07:57:33] 2024-06-21 05:57:14,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 07:57:33] 2024-06-21 05:57:14,624 | INFO     | *************************************
[2024-06-21 07:57:33] 2024-06-21 05:57:14,624 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 07:57:33] 2024-06-21 05:57:14,624 | INFO     | *************************************
[2024-06-21 07:57:33] 2024-06-21 05:57:14,624 | INFO     | 
[2024-06-21 07:57:33] 2024-06-21 05:57:14,625 | INFO     | architecture information:
[2024-06-21 07:57:33] 2024-06-21 05:57:14,626 | INFO     | executing command: cat /etc/os-release
[2024-06-21 07:57:33] 2024-06-21 05:57:14,644 | INFO     | cat /etc/os-release:
[2024-06-21 07:57:33] NAME="CentOS Linux"
[2024-06-21 07:57:33] VERSION="7 (Core)"
[2024-06-21 07:57:33] ID="centos"
[2024-06-21 07:57:33] ID_LIKE="rhel fedora"
[2024-06-21 07:57:33] VERSION_ID="7"
[2024-06-21 07:57:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 07:57:33] ANSI_COLOR="0;31"
[2024-06-21 07:57:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 07:57:33] HOME_URL="https://www.centos.org/"
[2024-06-21 07:57:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 07:57:33] 
[2024-06-21 07:57:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 07:57:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 07:57:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 07:57:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 07:57:33] 
[2024-06-21 07:57:33] 2024-06-21 05:57:14,644 | INFO     | *************************************
[2024-06-21 07:57:33] 2024-06-21 05:57:15,147 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-06-21 07:57:33] 2024-06-21 05:57:15,170 | INFO     | sufficient remaining disk space (1655312482304 B)
[2024-06-21 07:57:33] 2024-06-21 05:57:15,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 07:57:33] 2024-06-21 05:57:15,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 07:57:33] 2024-06-21 05:57:15,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 07:57:33] 2024-06-21 05:57:15,171 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 07:57:33] 2024-06-21 05:57:15,173 | INFO     | all data control threads have been joined
[2024-06-21 07:57:33] 2024-06-21 05:57:15,289 | INFO     | all payload control threads have been joined
[2024-06-21 07:57:33] 2024-06-21 05:57:15,412 | INFO     | all job control threads have been joined
[2024-06-21 07:57:33] 2024-06-21 05:57:15,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 07:57:33] 2024-06-21 05:57:15,780 | INFO     | aborting loop
[2024-06-21 07:57:33] 2024-06-21 05:57:16,072 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 07:57:33] 2024-06-21 05:57:16,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 07:57:33] 2024-06-21 05:57:16,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 07:57:33] 2024-06-21 05:57:16,175 | INFO     | [job] retrieve thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,178 | INFO     | [data] control thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,295 | INFO     | [payload] control thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,331 | INFO     | [data] copytool_in thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,341 | INFO     | [payload] failed_post thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,417 | INFO     | [job] control thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,581 | INFO     | [job] validate thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,784 | INFO     | [job] job monitor thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,815 | INFO     | [payload] validate_post thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:16,874 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:17,174 | INFO     | [data] copytool_out thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:17,198 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:17,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 07:57:33] 2024-06-21 05:57:17,422 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:18,400 | INFO     | [job] queue monitor thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:19,178 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:25,361 | INFO     | job.realtimelogging is not enabled
[2024-06-21 07:57:33] 2024-06-21 05:57:26,366 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 07:57:33] 2024-06-21 05:57:27,771 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47063800046656)>', '<ExcThread(monitor, started 47063982421760)>']
[2024-06-21 07:57:33] 2024-06-21 05:57:28,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 07:57:33] 2024-06-21 05:57:28,130 | INFO     | [monitor] control thread has ended
[2024-06-21 07:57:33] 2024-06-21 05:57:32,797 | INFO     | all workflow threads have been joined
[2024-06-21 07:57:33] 2024-06-21 05:57:32,797 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 07:57:33] 2024-06-21 05:57:32,797 | INFO     | traces error code: 0
[2024-06-21 07:57:33] 2024-06-21 05:57:32,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 07:57:33] 2024-06-21 05:57:32,891 [wrapper] ==== pilot stdout END ====
[2024-06-21 07:57:33] 2024-06-21 05:57:32,893 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 07:57:33] 2024-06-21 05:57:32,895 [wrapper] pilotpid: 205929
[2024-06-21 07:57:33] 2024-06-21 05:57:32,897 [wrapper] Pilot exit status: 0
[2024-06-21 07:57:33] 2024-06-21 05:57:32,913 [wrapper] pandaids: 6238830028
[2024-06-21 07:57:33] 2024-06-21 05:57:32,954 [wrapper] cleanup supervisor_pilot 1501268 205930
[2024-06-21 07:57:33] 2024-06-21 05:57:32,960 [wrapper] Test setup, not cleaning
[2024-06-21 07:57:33] 2024-06-21 05:57:32,962 [wrapper] ==== wrapper stdout END ====
[2024-06-21 07:57:33] 2024-06-21 05:57:32,964 [wrapper] ==== wrapper stderr END ====
[2024-06-21 07:57:33] 2024-06-21 05:57:32,968 [wrapper] apfmon messages muted
[2024-06-21 07:57:33]  *** Error codes and diagnostics ***
[2024-06-21 07:57:33]     "exeErrorCode": 0,
[2024-06-21 07:57:33]     "exeErrorDiag": "",
[2024-06-21 07:57:33]     "pilotErrorCode": 0,
[2024-06-21 07:57:33]     "pilotErrorDiag": "",
[2024-06-21 07:57:33]  *** Listing of results directory ***
[2024-06-21 07:57:33] total 886660
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-21 07:57:33] -rwx------ 1 boinc boinc     32308 Jun 20 11:05 runpilot2-wrapper.sh
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:05 queuedata.json
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc       100 Jun 20 17:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 07:57:33] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 17:12 run_atlas
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc       105 Jun 20 17:12 job.xml
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc      6455 Jun 20 17:14 init_data.xml
[2024-06-21 07:57:33] -rw-r--r-- 2 boinc boinc 541146743 Jun 20 17:14 EVNT.38776210._000680.pool.root.1
[2024-06-21 07:57:33] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:14 start_atlas.sh
[2024-06-21 07:57:33] drwxrwx--x 2 boinc boinc      4096 Jun 20 17:14 shared
[2024-06-21 07:57:33] -rw-r--r-- 2 boinc boinc    482526 Jun 20 17:14 input.tar.gz
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc         0 Jun 20 17:14 boinc_lockfile
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc      2646 Jun 20 17:14 pandaJob.out
[2024-06-21 07:57:33] -rw------- 1 boinc boinc       424 Jun 20 17:14 setup.sh.local
[2024-06-21 07:57:33] -rw------- 1 boinc boinc   1015545 Jun 20 17:14 agis_schedconf.cvmfs.json
[2024-06-21 07:57:33] -rw------- 1 boinc boinc   1321254 Jun 20 17:14 cric_ddmendpoints.json
[2024-06-21 07:57:33] drwx------ 4 boinc boinc      4096 Jun 20 17:14 pilot3
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc       533 Jun 21 07:56 boinc_task_state.xml
[2024-06-21 07:57:33] -rw------- 1 boinc boinc 347582052 Jun 21 07:56 HITS.38921013._050168.pool.root.1
[2024-06-21 07:57:33] -rw------- 1 boinc boinc        95 Jun 21 07:56 pilot_heartbeat.json
[2024-06-21 07:57:33] -rw------- 1 boinc boinc      1039 Jun 21 07:56 memory_monitor_summary.json
[2024-06-21 07:57:33] -rw------- 1 boinc boinc         0 Jun 21 07:57 agis_ddmendpoints.agis.ALL.json
[2024-06-21 07:57:33] -rw------- 1 boinc boinc    784795 Jun 21 07:57 log.38921013._050168.job.log.tgz.1
[2024-06-21 07:57:33] -rw------- 1 boinc boinc      7762 Jun 21 07:57 heartbeat.json
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc      8192 Jun 21 07:57 boinc_mmap_file
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc        29 Jun 21 07:57 wrapper_checkpoint.txt
[2024-06-21 07:57:33] -rw------- 1 boinc boinc      4294 Jun 21 07:57 pilotlog.txt
[2024-06-21 07:57:33] -rw------- 1 boinc boinc   7057551 Jun 21 07:57 log.38921013._050168.job.log.1
[2024-06-21 07:57:33] -rw------- 1 boinc boinc       357 Jun 21 07:57 output.list
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc       620 Jun 21 07:57 runtime_log
[2024-06-21 07:57:33] -rw------- 1 boinc boinc   7864320 Jun 21 07:57 result.tar.gz
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc     11410 Jun 21 07:57 runtime_log.err
[2024-06-21 07:57:33] -rw------- 1 boinc boinc       660 Jun 21 07:57 fU1MDmuuSe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm11kKDmgw4ern.diag
[2024-06-21 07:57:33] -rw-r--r-- 1 boinc boinc     21333 Jun 21 07:57 stderr.txt
[2024-06-21 07:57:33] HITS file was successfully produced:
[2024-06-21 07:57:33] -rw------- 1 boinc boinc 347582052 Jun 21 07:56 shared/HITS.pool.root.1
[2024-06-21 07:57:33]  *** Contents of shared directory: ***
[2024-06-21 07:57:33] total 876080
[2024-06-21 07:57:33] -rw-r--r-- 2 boinc boinc 541146743 Jun 20 17:14 ATLAS.root_0
[2024-06-21 07:57:33] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:14 start_atlas.sh
[2024-06-21 07:57:33] -rw-r--r-- 2 boinc boinc    482526 Jun 20 17:14 input.tar.gz
[2024-06-21 07:57:33] -rw------- 1 boinc boinc 347582052 Jun 21 07:56 HITS.pool.root.1
[2024-06-21 07:57:33] -rw------- 1 boinc boinc   7864320 Jun 21 07:57 result.tar.gz
07:57:35 (201681): run_atlas exited; CPU time 206331.934592
07:57:35 (201681): called boinc_finish(0)

</stderr_txt>
]]>

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