Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:45:11 (3801130): wrapper (7.7.26015): starting
11:45:11 (3801130): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 11:45:11] Arguments: --nthreads 4
[2024-06-24 11:45:11] Threads: 4
[2024-06-24 11:45:11] Checking for CVMFS
[2024-06-24 11:45:11] No cvmfs_config command found, will try listing directly
[2024-06-24 11:45:11] CVMFS is ok
[2024-06-24 11:45:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 11:45:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 11:45:11] Further information can be found at the LHC@home message board.
[2024-06-24 11:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 11:45:11] Checking for apptainer binary...
[2024-06-24 11:45:11] which: no apptainer in ((null))
[2024-06-24 11:45:11] apptainer is not installed, using version from CVMFS
[2024-06-24 11:45:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 11:45:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-24 11:45:13] apptainer works
[2024-06-24 11:45:13] Set ATHENA_PROC_NUMBER=4
[2024-06-24 11:45:13] Set ATHENA_CORE_NUMBER=4
[2024-06-24 11:45:13] Starting ATLAS job with PandaID=6238831252
[2024-06-24 11:45:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-25 02:28:58]  *** The last 200 lines of the pilot log: ***
[2024-06-25 02:28:58] 2024-06-25 00:28:36,535 | INFO     | intersect: -3279090367.203742
[2024-06-25 02:28:58] 2024-06-25 00:28:36,536 | INFO     | chi2: 3.4723784668236597
[2024-06-25 02:28:58] 2024-06-25 00:28:36,536 | INFO     | model: linear, x: [1719222376.0, 1719222437.0, 1719222498.0, 1719222559.0, 1719222620.0, 1719222681.0, 1719222742.0, 1719222803.0, 1719222864.0, 1719222925.0, 1719
[2024-06-25 02:28:58] 2024-06-25 00:28:36,537 | INFO     | sum of square deviations: 199301344272.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,548 | INFO     | sum of deviations: 383560612046.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,548 | INFO     | mean x: 1719248667.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,548 | INFO     | mean y: 2370209.7230590964
[2024-06-25 02:28:58] 2024-06-25 00:28:36,548 | INFO     | -- intersect: -3306368491.375779
[2024-06-25 02:28:58] 2024-06-25 00:28:36,549 | INFO     | intersect: -3306368491.375779
[2024-06-25 02:28:58] 2024-06-25 00:28:36,549 | INFO     | chi2: 3.4724476455868403
[2024-06-25 02:28:58] 2024-06-25 00:28:36,549 | INFO     | current chi2=3.4724476455868403 (change=-0.0019922587310552665 %)
[2024-06-25 02:28:58] 2024-06-25 00:28:36,549 | INFO     | right removable region: 862
[2024-06-25 02:28:58] 2024-06-25 00:28:36,550 | INFO     | model: linear, x: [1719222681.0, 1719222742.0, 1719222803.0, 1719222864.0, 1719222925.0, 1719222986.0, 1719223047.0, 1719223108.0, 1719223169.0, 1719223230.0, 1719
[2024-06-25 02:28:58] 2024-06-25 00:28:36,550 | INFO     | sum of square deviations: 199301344272.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,561 | INFO     | sum of deviations: 184762954656.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,562 | INFO     | mean x: 1719248972.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,562 | INFO     | mean y: 2379208.466975666
[2024-06-25 02:28:58] 2024-06-25 00:28:36,562 | INFO     | -- intersect: -1591456101.6576135
[2024-06-25 02:28:58] 2024-06-25 00:28:36,562 | INFO     | intersect: -1591456101.6576135
[2024-06-25 02:28:58] 2024-06-25 00:28:36,562 | INFO     | chi2: 1.1797301515885015
[2024-06-25 02:28:58] 2024-06-25 00:28:36,563 | INFO     | current chi2=1.1797301515885015 (change=66.02530044290785 %)
[2024-06-25 02:28:58] 2024-06-25 00:28:36,563 | INFO     | model: linear, x: [1719222986.0, 1719223047.0, 1719223108.0, 1719223169.0, 1719223230.0, 1719223291.0, 1719223352.0, 1719223413.0, 1719223474.0, 1719223535.0, 1719
[2024-06-25 02:28:58] 2024-06-25 00:28:36,564 | INFO     | sum of square deviations: 195857270394.5
[2024-06-25 02:28:58] 2024-06-25 00:28:36,574 | INFO     | sum of deviations: 41144630448.49999
[2024-06-25 02:28:58] 2024-06-25 00:28:36,575 | INFO     | mean x: 1719249124.5
[2024-06-25 02:28:58] 2024-06-25 00:28:36,575 | INFO     | mean y: 2385567.583916084
[2024-06-25 02:28:58] 2024-06-25 00:28:36,575 | INFO     | -- intersect: -358784940.5824537
[2024-06-25 02:28:58] 2024-06-25 00:28:36,575 | INFO     | intersect: -358784940.5824537
[2024-06-25 02:28:58] 2024-06-25 00:28:36,575 | INFO     | chi2: 0.12667393120110734
[2024-06-25 02:28:58] 2024-06-25 00:28:36,576 | INFO     | current chi2=0.12667393120110734 (change=89.26246557057634 %)
[2024-06-25 02:28:58] 2024-06-25 00:28:36,576 | INFO     | model: linear, x: [1719223291.0, 1719223352.0, 1719223413.0, 1719223474.0, 1719223535.0, 1719223596.0, 1719223657.0, 1719223718.0, 1719223779.0, 1719223840.0, 1719
[2024-06-25 02:28:58] 2024-06-25 00:28:36,576 | INFO     | sum of square deviations: 192453104242.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,587 | INFO     | sum of deviations: 28922227863.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,588 | INFO     | mean x: 1719249277.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,588 | INFO     | mean y: 2386111.9871043377
[2024-06-25 02:28:58] 2024-06-25 00:28:36,588 | INFO     | -- intersect: -255986022.55724657
[2024-06-25 02:28:58] 2024-06-25 00:28:36,588 | INFO     | intersect: -255986022.55724657
[2024-06-25 02:28:58] 2024-06-25 00:28:36,588 | INFO     | chi2: 0.09031502942944734
[2024-06-25 02:28:58] 2024-06-25 00:28:36,589 | INFO     | current chi2=0.09031502942944734 (change=28.702749987238228 %)
[2024-06-25 02:28:58] 2024-06-25 00:28:36,589 | INFO     | model: linear, x: [1719223596.0, 1719223657.0, 1719223718.0, 1719223779.0, 1719223840.0, 1719223901.0, 1719223962.0, 1719224023.0, 1719224084.0, 1719224145.0, 1719
[2024-06-25 02:28:58] 2024-06-25 00:28:36,590 | INFO     | sum of square deviations: 189088613252.0
[2024-06-25 02:28:58] 2024-06-25 00:28:36,600 | INFO     | sum of deviations: 43236329080.00001
[2024-06-25 02:28:58] 2024-06-25 00:28:36,600 | INFO     | mean x: 1719249429.5
[2024-06-25 02:28:58] 2024-06-25 00:28:36,600 | INFO     | mean y: 2385461.9150943398
[2024-06-25 02:28:58] 2024-06-25 00:28:36,600 | INFO     | -- intersect: -390731991.4632256
[2024-06-25 02:28:58] 2024-06-25 00:28:36,601 | INFO     | intersect: -390731991.4632256
[2024-06-25 02:28:58] 2024-06-25 00:28:36,601 | INFO     | chi2: 0.07398681288142754
[2024-06-25 02:28:58] 2024-06-25 00:28:36,601 | INFO     | current chi2=0.07398681288142754 (change=18.079179790087036 %)
[2024-06-25 02:28:58] 2024-06-25 00:28:36,601 | INFO     | left removable region: 40
[2024-06-25 02:28:58] 2024-06-25 00:28:36,602 | INFO     | model: linear, x: [1719224816.0, 1719224877.0, 1719224938.0, 1719224999.0, 1719225060.0, 1719225121.0, 1719225182.0, 1719225243.0, 1719225304.0, 1719225365.0, 1719
[2024-06-25 02:28:58] 2024-06-25 00:28:36,602 | INFO     | sum of square deviations: 172223826345.5
[2024-06-25 02:28:58] 2024-06-25 00:28:36,612 | INFO     | sum of deviations: 69143519184.50002
[2024-06-25 02:28:58] 2024-06-25 00:28:36,612 | INFO     | mean x: 1719249856.5
[2024-06-25 02:28:58] 2024-06-25 00:28:36,612 | INFO     | mean y: 2384123.697080292
[2024-06-25 02:28:58] 2024-06-25 00:28:36,613 | INFO     | -- intersect: -687851298.1857219
[2024-06-25 02:28:58] 2024-06-25 00:28:36,613 | INFO     | intersect: -687851298.1857219
[2024-06-25 02:28:58] 2024-06-25 00:28:36,613 | INFO     | chi2: 0.00418893260040131
[2024-06-25 02:28:58] 2024-06-25 00:28:36,613 | INFO     | -- intersect: -687851298.1857219
[2024-06-25 02:28:58] 2024-06-25 00:28:36,614 | INFO     | current memory leak: 0.40 B/s (using 822 data points, chi2=0.00)
[2024-06-25 02:28:58] 2024-06-25 00:28:36,614 | INFO     | ..............................
[2024-06-25 02:28:58] 2024-06-25 00:28:36,614 | INFO     | . Timing measurements:
[2024-06-25 02:28:58] 2024-06-25 00:28:36,614 | INFO     | . get job = 0 s
[2024-06-25 02:28:58] 2024-06-25 00:28:36,614 | INFO     | . initial setup = 1 s
[2024-06-25 02:28:58] 2024-06-25 00:28:36,615 | INFO     | . payload setup = 8 s
[2024-06-25 02:28:58] 2024-06-25 00:28:36,615 | INFO     | . stage-in = 0 s
[2024-06-25 02:28:58] 2024-06-25 00:28:36,615 | INFO     | . payload execution = 52937 s
[2024-06-25 02:28:58] 2024-06-25 00:28:36,615 | INFO     | . stage-out = 1 s
[2024-06-25 02:28:58] 2024-06-25 00:28:36,615 | INFO     | . log creation = 0 s
[2024-06-25 02:28:58] 2024-06-25 00:28:36,615 | INFO     | ..............................
[2024-06-25 02:28:58] 2024-06-25 00:28:37,128 | INFO     | 
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | job summary report
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | --------------------------------------------------
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | PanDA job id: 6238831252
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | task id: 38921013
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | errors: (none)
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | pilot state: finished 
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | transexitcode: 0
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | exeerrorcode: 0
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | exeerrordiag: 
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | exitcode: 0
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | exitmsg: OK
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | cpuconsumptiontime: 205911 s
[2024-06-25 02:28:58] 2024-06-25 00:28:37,129 | INFO     | nevents: 400
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | neventsw: 0
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | pid: 3812604
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | pgrp: 3812604
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | corecount: 4
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | event service: False
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | sizes: {0: 2385602, 1: 2387149, 6: 2387355, 12: 2387383, 52949: 2435420, 52950: 2435419, 52952: 2444585, 52953: 2444641, 52960: 2444811}
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | --------------------------------------------------
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | 
[2024-06-25 02:28:58] 2024-06-25 00:28:37,130 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2024-06-25 02:28:58] 2024-06-25 00:28:37,148 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,148 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,148 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,148 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,151 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-25 02:28:58] 2024-06-25 00:28:37,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,151 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-25 02:28:58] 2024-06-25 00:28:37,151 | INFO     | job 6238831252 has completed (purged errors)
[2024-06-25 02:28:58] 2024-06-25 00:28:37,152 | INFO     | overall cleanup function is called
[2024-06-25 02:28:58] 2024-06-25 00:28:38,159 | INFO     | --- collectZombieJob: --- 10, [3812604]
[2024-06-25 02:28:58] 2024-06-25 00:28:38,160 | INFO     | zombie collector waiting for pid 3812604
[2024-06-25 02:28:58] 2024-06-25 00:28:38,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-25 02:28:58] 2024-06-25 00:28:39,164 | INFO     | collected zombie processes
[2024-06-25 02:28:58] 2024-06-25 00:28:39,165 | INFO     | will now attempt to kill all subprocesses of pid=3812604
[2024-06-25 02:28:58] 2024-06-25 00:28:39,285 | INFO     | process IDs to be killed: [3812604] (in reverse order)
[2024-06-25 02:28:58] 2024-06-25 00:28:39,379 | WARNING  | found no corresponding commands to process id(s)
[2024-06-25 02:28:58] 2024-06-25 00:28:39,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-25 02:28:58] 2024-06-25 00:28:39,385 | INFO     | did not find any defunct processes belonging to 3812604
[2024-06-25 02:28:58] 2024-06-25 00:28:39,390 | INFO     | did not find any defunct processes belonging to 3812604
[2024-06-25 02:28:58] 2024-06-25 00:28:39,391 | INFO     | ready for new job
[2024-06-25 02:28:58] 2024-06-25 00:28:39,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-25 02:28:58] 2024-06-25 00:28:39,395 | INFO     | *************************************
[2024-06-25 02:28:58] 2024-06-25 00:28:39,395 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-25 02:28:58] 2024-06-25 00:28:39,395 | INFO     | *************************************
[2024-06-25 02:28:58] 2024-06-25 00:28:39,395 | INFO     | 
[2024-06-25 02:28:58] 2024-06-25 00:28:39,398 | INFO     | architecture information:
[2024-06-25 02:28:58] 2024-06-25 00:28:39,398 | INFO     | executing command: cat /etc/os-release
[2024-06-25 02:28:58] 2024-06-25 00:28:39,411 | INFO     | cat /etc/os-release:
[2024-06-25 02:28:58] NAME="CentOS Linux"
[2024-06-25 02:28:58] VERSION="7 (Core)"
[2024-06-25 02:28:58] ID="centos"
[2024-06-25 02:28:58] ID_LIKE="rhel fedora"
[2024-06-25 02:28:58] VERSION_ID="7"
[2024-06-25 02:28:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-25 02:28:58] ANSI_COLOR="0;31"
[2024-06-25 02:28:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-25 02:28:58] HOME_URL="https://www.centos.org/"
[2024-06-25 02:28:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-25 02:28:58] 
[2024-06-25 02:28:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-25 02:28:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-25 02:28:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-25 02:28:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-25 02:28:58] 
[2024-06-25 02:28:58] 2024-06-25 00:28:39,411 | INFO     | *************************************
[2024-06-25 02:28:58] 2024-06-25 00:28:39,914 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2024-06-25 02:28:58] 2024-06-25 00:28:39,932 | INFO     | sufficient remaining disk space (1681789026304 B)
[2024-06-25 02:28:58] 2024-06-25 00:28:39,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-25 02:28:58] 2024-06-25 00:28:39,933 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-25 02:28:58] 2024-06-25 00:28:39,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-25 02:28:58] 2024-06-25 00:28:40,063 | INFO     | all data control threads have been joined
[2024-06-25 02:28:58] 2024-06-25 00:28:40,281 | INFO     | found 0 job(s) in 20 queues
[2024-06-25 02:28:58] 2024-06-25 00:28:40,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-25 02:28:58] 2024-06-25 00:28:40,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-25 02:28:58] 2024-06-25 00:28:40,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-25 02:28:58] 2024-06-25 00:28:40,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-25 02:28:58] 2024-06-25 00:28:40,408 | INFO     | aborting loop
[2024-06-25 02:28:58] 2024-06-25 00:28:40,937 | INFO     | [job] retrieve thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:41,067 | INFO     | [data] control thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:41,184 | INFO     | [data] copytool_in thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:41,290 | INFO     | [job] validate thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:41,377 | INFO     | all payload control threads have been joined
[2024-06-25 02:28:58] 2024-06-25 00:28:41,412 | INFO     | [job] job monitor thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:41,518 | INFO     | all job control threads have been joined
[2024-06-25 02:28:58] 2024-06-25 00:28:41,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-25 02:28:58] 2024-06-25 00:28:41,743 | INFO     | [payload] validate_post thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:41,939 | INFO     | [data] copytool_out thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:41,972 | INFO     | [payload] failed_post thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:42,138 | INFO     | [payload] validate_pre thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:42,237 | INFO     | [payload] execute_payloads thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:42,269 | INFO     | [job] create_data_payload thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:42,382 | INFO     | [payload] control thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:42,522 | INFO     | [job] control thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:42,689 | INFO     | [job] queue monitor thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:44,339 | INFO     | [data] queue_monitor thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:50,399 | INFO     | job.realtimelogging is not enabled
[2024-06-25 02:28:58] 2024-06-25 00:28:51,404 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-25 02:28:58] 2024-06-25 00:28:52,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47828275983424)>', '<ExcThread(monitor, started 47828462561024)>']
[2024-06-25 02:28:58] 2024-06-25 00:28:53,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-25 02:28:58] 2024-06-25 00:28:53,347 | INFO     | [monitor] control thread has ended
[2024-06-25 02:28:58] 2024-06-25 00:28:57,887 | INFO     | all workflow threads have been joined
[2024-06-25 02:28:58] 2024-06-25 00:28:57,888 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-25 02:28:58] 2024-06-25 00:28:57,888 | INFO     | traces error code: 0
[2024-06-25 02:28:58] 2024-06-25 00:28:57,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-25 02:28:58] 2024-06-25 00:28:57,996 [wrapper] ==== pilot stdout END ====
[2024-06-25 02:28:58] 2024-06-25 00:28:57,998 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-25 02:28:58] 2024-06-25 00:28:58,000 [wrapper] pilotpid: 3805409
[2024-06-25 02:28:58] 2024-06-25 00:28:58,003 [wrapper] Pilot exit status: 0
[2024-06-25 02:28:58] 2024-06-25 00:28:58,031 [wrapper] pandaids: 6238831252
[2024-06-25 02:28:58] 2024-06-25 00:28:58,084 [wrapper] cleanup supervisor_pilot  859599 3805410
[2024-06-25 02:28:58] 2024-06-25 00:28:58,087 [wrapper] Test setup, not cleaning
[2024-06-25 02:28:58] 2024-06-25 00:28:58,089 [wrapper] ==== wrapper stdout END ====
[2024-06-25 02:28:58] 2024-06-25 00:28:58,090 [wrapper] ==== wrapper stderr END ====
[2024-06-25 02:28:58] 2024-06-25 00:28:58,094 [wrapper] apfmon messages muted
[2024-06-25 02:28:58]  *** Error codes and diagnostics ***
[2024-06-25 02:28:58]     "exeErrorCode": 0,
[2024-06-25 02:28:58]     "exeErrorDiag": "",
[2024-06-25 02:28:58]     "pilotErrorCode": 0,
[2024-06-25 02:28:58]     "pilotErrorDiag": "",
[2024-06-25 02:28:58]  *** Listing of results directory ***
[2024-06-25 02:28:58] total 886100
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-25 02:28:58] -rwx------ 1 boinc boinc     32308 Jun 20 11:05 runpilot2-wrapper.sh
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:05 queuedata.json
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc       100 Jun 24 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-25 02:28:58] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 11:45 run_atlas
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc       105 Jun 24 11:45 job.xml
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc      6455 Jun 24 11:45 init_data.xml
[2024-06-25 02:28:58] -rw-r--r-- 2 boinc boinc 543632989 Jun 24 11:45 EVNT.38776210._000660.pool.root.1
[2024-06-25 02:28:58] -rw-r--r-- 2 boinc boinc     17537 Jun 24 11:45 start_atlas.sh
[2024-06-25 02:28:58] drwxrwx--x 2 boinc boinc      4096 Jun 24 11:45 shared
[2024-06-25 02:28:58] -rw-r--r-- 2 boinc boinc    482532 Jun 24 11:45 input.tar.gz
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc         0 Jun 24 11:45 boinc_lockfile
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc      2646 Jun 24 11:45 pandaJob.out
[2024-06-25 02:28:58] -rw------- 1 boinc boinc       424 Jun 24 11:45 setup.sh.local
[2024-06-25 02:28:58] -rw------- 1 boinc boinc   1018498 Jun 24 11:45 agis_schedconf.cvmfs.json
[2024-06-25 02:28:58] -rw------- 1 boinc boinc   1321363 Jun 24 11:45 cric_ddmendpoints.json
[2024-06-25 02:28:58] drwx------ 4 boinc boinc      4096 Jun 24 11:45 pilot3
[2024-06-25 02:28:58] -rw------- 1 boinc boinc 345023892 Jun 25 02:27 HITS.38921013._050171.pool.root.1
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc       533 Jun 25 02:27 boinc_task_state.xml
[2024-06-25 02:28:58] -rw------- 1 boinc boinc      1042 Jun 25 02:28 memory_monitor_summary.json
[2024-06-25 02:28:58] -rw------- 1 boinc boinc         0 Jun 25 02:28 agis_ddmendpoints.agis.ALL.json
[2024-06-25 02:28:58] -rw------- 1 boinc boinc    788778 Jun 25 02:28 log.38921013._050171.job.log.tgz.1
[2024-06-25 02:28:58] -rw------- 1 boinc boinc      7763 Jun 25 02:28 heartbeat.json
[2024-06-25 02:28:58] -rw------- 1 boinc boinc        95 Jun 25 02:28 pilot_heartbeat.json
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc      8192 Jun 25 02:28 boinc_mmap_file
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc        29 Jun 25 02:28 wrapper_checkpoint.txt
[2024-06-25 02:28:58] -rw------- 1 boinc boinc      4294 Jun 25 02:28 pilotlog.txt
[2024-06-25 02:28:58] -rw------- 1 boinc boinc   6800832 Jun 25 02:28 log.38921013._050171.job.log.1
[2024-06-25 02:28:58] -rw------- 1 boinc boinc       357 Jun 25 02:28 output.list
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc       620 Jun 25 02:28 runtime_log
[2024-06-25 02:28:58] -rw------- 1 boinc boinc   7608320 Jun 25 02:28 result.tar.gz
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc     11410 Jun 25 02:28 runtime_log.err
[2024-06-25 02:28:58] -rw------- 1 boinc boinc       662 Jun 25 02:28 j57MDmuuSe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm41kKDmZUOVqn.diag
[2024-06-25 02:28:58] -rw-r--r-- 1 boinc boinc     21331 Jun 25 02:28 stderr.txt
[2024-06-25 02:28:58] HITS file was successfully produced:
[2024-06-25 02:28:58] -rw------- 1 boinc boinc 345023892 Jun 25 02:27 shared/HITS.pool.root.1
[2024-06-25 02:28:58]  *** Contents of shared directory: ***
[2024-06-25 02:28:58] total 875764
[2024-06-25 02:28:58] -rw-r--r-- 2 boinc boinc 543632989 Jun 24 11:45 ATLAS.root_0
[2024-06-25 02:28:58] -rw-r--r-- 2 boinc boinc     17537 Jun 24 11:45 start_atlas.sh
[2024-06-25 02:28:58] -rw-r--r-- 2 boinc boinc    482532 Jun 24 11:45 input.tar.gz
[2024-06-25 02:28:58] -rw------- 1 boinc boinc 345023892 Jun 25 02:27 HITS.pool.root.1
[2024-06-25 02:28:58] -rw------- 1 boinc boinc   7608320 Jun 25 02:28 result.tar.gz
02:29:00 (3801130): run_atlas exited; CPU time 205465.274200
02:29:00 (3801130): called boinc_finish(0)

</stderr_txt>
]]>

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