Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:55:56 (3994895): wrapper (7.7.26015): starting
10:55:56 (3994895): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 10:55:56] Arguments: --nthreads 4
[2024-06-24 10:55:56] Threads: 4
[2024-06-24 10:55:56] Checking for CVMFS
[2024-06-24 10:55:56] No cvmfs_config command found, will try listing directly
[2024-06-24 10:55:56] CVMFS is ok
[2024-06-24 10:55:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 10:55:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 10:55:56] Further information can be found at the LHC@home message board.
[2024-06-24 10:55:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 10:55:56] Checking for apptainer binary...
[2024-06-24 10:55:56] which: no apptainer in ((null))
[2024-06-24 10:55:56] apptainer is not installed, using version from CVMFS
[2024-06-24 10:55:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 10:55:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2024-06-24 10:55:57] apptainer works
[2024-06-24 10:55:57] Set ATHENA_PROC_NUMBER=4
[2024-06-24 10:55:57] Set ATHENA_CORE_NUMBER=4
[2024-06-24 10:55:57] Starting ATLAS job with PandaID=6238822196
[2024-06-24 10:55:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 22:35:29]  *** The last 200 lines of the pilot log: ***
[2024-06-24 22:35:29] 2024-06-24 20:35:07,567 | INFO     | chi2: 3.396074552754598
[2024-06-24 22:35:29] 2024-06-24 20:35:07,567 | INFO     | current chi2=3.396074552754598 (change=0.007319978324972255 %)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,568 | INFO     | right removable region: 681
[2024-06-24 22:35:29] 2024-06-24 20:35:07,568 | INFO     | model: linear, x: [1719219704.0, 1719219765.0, 1719219826.0, 1719219887.0, 1719219948.0, 1719220009.0, 1719220070.0, 1719220131.0, 1719220192.0, 1719220253.0, 1719
[2024-06-24 22:35:29] 2024-06-24 20:35:07,568 | INFO     | sum of square deviations: 98362739150.5
[2024-06-24 22:35:29] 2024-06-24 20:35:07,574 | INFO     | sum of deviations: 205398411666.50003
[2024-06-24 22:35:29] 2024-06-24 20:35:07,575 | INFO     | mean x: 1719240474.5
[2024-06-24 22:35:29] 2024-06-24 20:35:07,575 | INFO     | mean y: 2376757.802052786
[2024-06-24 22:35:29] 2024-06-24 20:35:07,575 | INFO     | -- intersect: -3587694704.0627294
[2024-06-24 22:35:29] 2024-06-24 20:35:07,575 | INFO     | intersect: -3587694704.0627294
[2024-06-24 22:35:29] 2024-06-24 20:35:07,575 | INFO     | chi2: 1.2075808730496744
[2024-06-24 22:35:29] 2024-06-24 20:35:07,575 | INFO     | current chi2=1.2075808730496744 (change=64.44446493637489 %)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,576 | INFO     | model: linear, x: [1719220009.0, 1719220070.0, 1719220131.0, 1719220192.0, 1719220253.0, 1719220314.0, 1719220375.0, 1719220436.0, 1719220497.0, 1719220558.0, 1719
[2024-06-24 22:35:29] 2024-06-24 20:35:07,576 | INFO     | sum of square deviations: 96215154698.0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,583 | INFO     | sum of deviations: 87441457964.0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,583 | INFO     | mean x: 1719240627.0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,583 | INFO     | mean y: 2385133.8020679466
[2024-06-24 22:35:29] 2024-06-24 20:35:07,583 | INFO     | -- intersect: -1560080857.0045385
[2024-06-24 22:35:29] 2024-06-24 20:35:07,583 | INFO     | intersect: -1560080857.0045385
[2024-06-24 22:35:29] 2024-06-24 20:35:07,584 | INFO     | chi2: 0.08103042267110311
[2024-06-24 22:35:29] 2024-06-24 20:35:07,584 | INFO     | current chi2=0.08103042267110311 (change=93.28985540600145 %)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,584 | INFO     | model: linear, x: [1719220314.0, 1719220375.0, 1719220436.0, 1719220497.0, 1719220558.0, 1719220619.0, 1719220680.0, 1719220741.0, 1719220802.0, 1719220863.0, 1719
[2024-06-24 22:35:29] 2024-06-24 20:35:07,585 | INFO     | sum of square deviations: 94099059208.0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,591 | INFO     | sum of deviations: 74720658568.99998
[2024-06-24 22:35:29] 2024-06-24 20:35:07,591 | INFO     | mean x: 1719240779.5
[2024-06-24 22:35:29] 2024-06-24 20:35:07,591 | INFO     | mean y: 2386045.7351190476
[2024-06-24 22:35:29] 2024-06-24 20:35:07,591 | INFO     | -- intersect: -1362800857.9826112
[2024-06-24 22:35:29] 2024-06-24 20:35:07,591 | INFO     | intersect: -1362800857.9826112
[2024-06-24 22:35:29] 2024-06-24 20:35:07,592 | INFO     | chi2: 0.043235606161112966
[2024-06-24 22:35:29] 2024-06-24 20:35:07,592 | INFO     | current chi2=0.043235606161112966 (change=46.64274881472196 %)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,592 | INFO     | model: linear, x: [1719220619.0, 1719220680.0, 1719220741.0, 1719220802.0, 1719220863.0, 1719220924.0, 1719220985.0, 1719221046.0, 1719221107.0, 1719221168.0, 1719
[2024-06-24 22:35:29] 2024-06-24 20:35:07,592 | INFO     | sum of square deviations: 92014220118.0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,599 | INFO     | sum of deviations: 89836181202.00002
[2024-06-24 22:35:29] 2024-06-24 20:35:07,599 | INFO     | mean x: 1719240932.0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,600 | INFO     | mean y: 2384939.8140929537
[2024-06-24 22:35:29] 2024-06-24 20:35:07,600 | INFO     | -- intersect: -1676160394.7980902
[2024-06-24 22:35:29] 2024-06-24 20:35:07,600 | INFO     | intersect: -1676160394.7980902
[2024-06-24 22:35:29] 2024-06-24 20:35:07,600 | INFO     | chi2: 0.0186368288010229
[2024-06-24 22:35:29] 2024-06-24 20:35:07,600 | INFO     | current chi2=0.0186368288010229 (change=56.89472068097137 %)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,601 | INFO     | model: linear, x: [1719220924.0, 1719220985.0, 1719221046.0, 1719221107.0, 1719221168.0, 1719221229.0, 1719221290.0, 1719221351.0, 1719221412.0, 1719221473.0, 1719
[2024-06-24 22:35:29] 2024-06-24 20:35:07,601 | INFO     | sum of square deviations: 89960404865.5
[2024-06-24 22:35:29] 2024-06-24 20:35:07,607 | INFO     | sum of deviations: 81527562650.5
[2024-06-24 22:35:29] 2024-06-24 20:35:07,607 | INFO     | mean x: 1719241084.5
[2024-06-24 22:35:29] 2024-06-24 20:35:07,607 | INFO     | mean y: 2385556.7507552872
[2024-06-24 22:35:29] 2024-06-24 20:35:07,607 | INFO     | -- intersect: -1555694750.218173
[2024-06-24 22:35:29] 2024-06-24 20:35:07,607 | INFO     | intersect: -1555694750.218173
[2024-06-24 22:35:29] 2024-06-24 20:35:07,608 | INFO     | chi2: 0.015097099519707632
[2024-06-24 22:35:29] 2024-06-24 20:35:07,608 | INFO     | current chi2=0.015097099519707632 (change=18.993195243178846 %)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,608 | INFO     | left removable region: 50
[2024-06-24 22:35:29] 2024-06-24 20:35:07,608 | INFO     | model: linear, x: [1719222449.0, 1719222510.0, 1719222571.0, 1719222632.0, 1719222693.0, 1719222754.0, 1719222815.0, 1719222876.0, 1719222937.0, 1719222998.0, 1719
[2024-06-24 22:35:29] 2024-06-24 20:35:07,609 | INFO     | sum of square deviations: 77905014180.0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,614 | INFO     | sum of deviations: 50084953288.00001
[2024-06-24 22:35:29] 2024-06-24 20:35:07,614 | INFO     | mean x: 1719241664.0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,614 | INFO     | mean y: 2387891.5499207606
[2024-06-24 22:35:29] 2024-06-24 20:35:07,614 | INFO     | -- intersect: -1102908594.6720061
[2024-06-24 22:35:29] 2024-06-24 20:35:07,614 | INFO     | intersect: -1102908594.6720061
[2024-06-24 22:35:29] 2024-06-24 20:35:07,615 | INFO     | chi2: 0.004240697317331397
[2024-06-24 22:35:29] 2024-06-24 20:35:07,615 | INFO     | -- intersect: -1102908594.6720061
[2024-06-24 22:35:29] 2024-06-24 20:35:07,615 | INFO     | current memory leak: 0.64 B/s (using 631 data points, chi2=0.00)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | ..............................
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | . Timing measurements:
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | . get job = 0 s
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | . initial setup = 1 s
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | . payload setup = 7 s
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | . stage-in = 0 s
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | . payload execution = 41903 s
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | . stage-out = 1 s
[2024-06-24 22:35:29] 2024-06-24 20:35:07,616 | INFO     | . log creation = 0 s
[2024-06-24 22:35:29] 2024-06-24 20:35:07,617 | INFO     | ..............................
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | 
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | job summary report
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | --------------------------------------------------
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | PanDA job id: 6238822196
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | task id: 38921001
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | errors: (none)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | pilot state: finished 
[2024-06-24 22:35:29] 2024-06-24 20:35:07,675 | INFO     | transexitcode: 0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | exeerrorcode: 0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | exeerrordiag: 
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | exitcode: 0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | exitmsg: OK
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | cpuconsumptiontime: 161124 s
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | nevents: 400
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | neventsw: 0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | pid: 4006034
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | pgrp: 4006034
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | corecount: 4
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | event service: False
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | sizes: {0: 2385573, 1: 2387006, 4: 2387326, 12: 2387354, 41914: 2430837, 41915: 2430836, 41916: 2440058, 41922: 2440172}
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | --------------------------------------------------
[2024-06-24 22:35:29] 2024-06-24 20:35:07,676 | INFO     | 
[2024-06-24 22:35:29] 2024-06-24 20:35:07,677 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-06-24 22:35:29] 2024-06-24 20:35:07,696 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,697 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,697 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,697 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,699 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,699 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 22:35:29] 2024-06-24 20:35:07,699 | INFO     | job 6238822196 has completed (purged errors)
[2024-06-24 22:35:29] 2024-06-24 20:35:07,699 | INFO     | overall cleanup function is called
[2024-06-24 22:35:29] 2024-06-24 20:35:08,707 | INFO     | --- collectZombieJob: --- 10, [4006034]
[2024-06-24 22:35:29] 2024-06-24 20:35:08,707 | INFO     | zombie collector waiting for pid 4006034
[2024-06-24 22:35:29] 2024-06-24 20:35:08,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 22:35:29] 2024-06-24 20:35:09,713 | INFO     | collected zombie processes
[2024-06-24 22:35:29] 2024-06-24 20:35:09,713 | INFO     | will now attempt to kill all subprocesses of pid=4006034
[2024-06-24 22:35:29] 2024-06-24 20:35:09,805 | INFO     | process IDs to be killed: [4006034] (in reverse order)
[2024-06-24 22:35:29] 2024-06-24 20:35:09,890 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 22:35:29] 2024-06-24 20:35:09,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 22:35:29] 2024-06-24 20:35:09,895 | INFO     | did not find any defunct processes belonging to 4006034
[2024-06-24 22:35:29] 2024-06-24 20:35:09,898 | INFO     | did not find any defunct processes belonging to 4006034
[2024-06-24 22:35:29] 2024-06-24 20:35:09,898 | INFO     | ready for new job
[2024-06-24 22:35:29] 2024-06-24 20:35:09,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 22:35:29] 2024-06-24 20:35:09,900 | INFO     | *************************************
[2024-06-24 22:35:29] 2024-06-24 20:35:09,901 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 22:35:29] 2024-06-24 20:35:09,901 | INFO     | *************************************
[2024-06-24 22:35:29] 2024-06-24 20:35:09,901 | INFO     | 
[2024-06-24 22:35:29] 2024-06-24 20:35:09,902 | INFO     | architecture information:
[2024-06-24 22:35:29] 2024-06-24 20:35:09,902 | INFO     | executing command: cat /etc/os-release
[2024-06-24 22:35:29] 2024-06-24 20:35:09,913 | INFO     | cat /etc/os-release:
[2024-06-24 22:35:29] NAME="CentOS Linux"
[2024-06-24 22:35:29] VERSION="7 (Core)"
[2024-06-24 22:35:29] ID="centos"
[2024-06-24 22:35:29] ID_LIKE="rhel fedora"
[2024-06-24 22:35:29] VERSION_ID="7"
[2024-06-24 22:35:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 22:35:29] ANSI_COLOR="0;31"
[2024-06-24 22:35:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 22:35:29] HOME_URL="https://www.centos.org/"
[2024-06-24 22:35:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 22:35:29] 
[2024-06-24 22:35:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 22:35:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 22:35:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 22:35:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 22:35:29] 
[2024-06-24 22:35:29] 2024-06-24 20:35:09,913 | INFO     | *************************************
[2024-06-24 22:35:29] 2024-06-24 20:35:10,415 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-06-24 22:35:29] 2024-06-24 20:35:10,429 | INFO     | sufficient remaining disk space (1681824677888 B)
[2024-06-24 22:35:29] 2024-06-24 20:35:10,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 22:35:29] 2024-06-24 20:35:10,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 22:35:29] 2024-06-24 20:35:10,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 22:35:29] 2024-06-24 20:35:10,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 22:35:29] 2024-06-24 20:35:10,430 | INFO     | aborting loop
[2024-06-24 22:35:29] 2024-06-24 20:35:10,454 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 22:35:29] 2024-06-24 20:35:10,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 22:35:29] 2024-06-24 20:35:10,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 22:35:29] 2024-06-24 20:35:10,727 | INFO     | all payload control threads have been joined
[2024-06-24 22:35:29] 2024-06-24 20:35:10,987 | INFO     | all data control threads have been joined
[2024-06-24 22:35:29] 2024-06-24 20:35:11,433 | INFO     | [job] retrieve thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:11,435 | INFO     | [job] job monitor thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:11,680 | INFO     | all job control threads have been joined
[2024-06-24 22:35:29] 2024-06-24 20:35:11,698 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:11,732 | INFO     | [payload] control thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:11,739 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:11,992 | INFO     | [data] control thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:12,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 22:35:29] 2024-06-24 20:35:12,196 | INFO     | [job] validate thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:12,435 | INFO     | [data] copytool_out thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:12,496 | INFO     | [payload] validate_post thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:12,566 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:12,608 | INFO     | [data] copytool_in thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:12,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 22:35:29] 2024-06-24 20:35:12,685 | INFO     | [job] control thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:12,721 | INFO     | [payload] failed_post thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:13,689 | INFO     | [job] queue monitor thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:16,189 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:21,006 | INFO     | job.realtimelogging is not enabled
[2024-06-24 22:35:29] 2024-06-24 20:35:22,011 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 22:35:29] 2024-06-24 20:35:23,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47710786368576)>', '<ExcThread(monitor, started 47710975047424)>']
[2024-06-24 22:35:29] 2024-06-24 20:35:23,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 22:35:29] 2024-06-24 20:35:23,519 | INFO     | [monitor] control thread has ended
[2024-06-24 22:35:29] 2024-06-24 20:35:28,109 | INFO     | all workflow threads have been joined
[2024-06-24 22:35:29] 2024-06-24 20:35:28,109 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 22:35:29] 2024-06-24 20:35:28,109 | INFO     | traces error code: 0
[2024-06-24 22:35:29] 2024-06-24 20:35:28,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 22:35:29] 2024-06-24 20:35:28,200 [wrapper] ==== pilot stdout END ====
[2024-06-24 22:35:29] 2024-06-24 20:35:28,203 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 22:35:29] 2024-06-24 20:35:28,205 [wrapper] pilotpid: 3999145
[2024-06-24 22:35:29] 2024-06-24 20:35:28,209 [wrapper] Pilot exit status: 0
[2024-06-24 22:35:29] 2024-06-24 20:35:28,217 [wrapper] pandaids: 6238822196
[2024-06-24 22:35:29] 2024-06-24 20:35:28,283 [wrapper] cleanup supervisor_pilot  882757 3999146
[2024-06-24 22:35:29] 2024-06-24 20:35:28,287 [wrapper] Test setup, not cleaning
[2024-06-24 22:35:29] 2024-06-24 20:35:28,289 [wrapper] ==== wrapper stdout END ====
[2024-06-24 22:35:29] 2024-06-24 20:35:28,291 [wrapper] ==== wrapper stderr END ====
[2024-06-24 22:35:29] 2024-06-24 20:35:28,302 [wrapper] apfmon messages muted
[2024-06-24 22:35:29]  *** Error codes and diagnostics ***
[2024-06-24 22:35:29]     "exeErrorCode": 0,
[2024-06-24 22:35:29]     "exeErrorDiag": "",
[2024-06-24 22:35:29]     "pilotErrorCode": 0,
[2024-06-24 22:35:29]     "pilotErrorDiag": "",
[2024-06-24 22:35:29]  *** Listing of results directory ***
[2024-06-24 22:35:29] total 959940
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-24 22:35:29] -rwx------ 1 boinc boinc     32308 Jun 20 10:54 runpilot2-wrapper.sh
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc      5654 Jun 20 10:54 queuedata.json
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc       100 Jun 24 10:55 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 22:35:29] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 10:55 run_atlas
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc       105 Jun 24 10:55 job.xml
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc      6454 Jun 24 10:55 init_data.xml
[2024-06-24 22:35:29] -rw-r--r-- 2 boinc boinc 614496625 Jun 24 10:55 EVNT.38776190._000935.pool.root.1
[2024-06-24 22:35:29] -rw-r--r-- 2 boinc boinc     17537 Jun 24 10:55 start_atlas.sh
[2024-06-24 22:35:29] drwxrwx--x 2 boinc boinc      4096 Jun 24 10:55 shared
[2024-06-24 22:35:29] -rw-r--r-- 2 boinc boinc    482527 Jun 24 10:55 input.tar.gz
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc         0 Jun 24 10:55 boinc_lockfile
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc      2653 Jun 24 10:55 pandaJob.out
[2024-06-24 22:35:29] -rw------- 1 boinc boinc       424 Jun 24 10:55 setup.sh.local
[2024-06-24 22:35:29] -rw------- 1 boinc boinc   1018482 Jun 24 10:56 agis_schedconf.cvmfs.json
[2024-06-24 22:35:29] -rw------- 1 boinc boinc   1321363 Jun 24 10:56 cric_ddmendpoints.json
[2024-06-24 22:35:29] drwx------ 4 boinc boinc      4096 Jun 24 10:56 pilot3
[2024-06-24 22:35:29] -rw------- 1 boinc boinc 353201016 Jun 24 22:34 HITS.38921001._063058.pool.root.1
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc       533 Jun 24 22:34 boinc_task_state.xml
[2024-06-24 22:35:29] -rw------- 1 boinc boinc        95 Jun 24 22:34 pilot_heartbeat.json
[2024-06-24 22:35:29] -rw------- 1 boinc boinc      1043 Jun 24 22:34 memory_monitor_summary.json
[2024-06-24 22:35:29] -rw------- 1 boinc boinc         0 Jun 24 22:35 agis_ddmendpoints.agis.ALL.json
[2024-06-24 22:35:29] -rw------- 1 boinc boinc    658763 Jun 24 22:35 log.38921001._063058.job.log.tgz.1
[2024-06-24 22:35:29] -rw------- 1 boinc boinc      7761 Jun 24 22:35 heartbeat.json
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc        29 Jun 24 22:35 wrapper_checkpoint.txt
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc      8192 Jun 24 22:35 boinc_mmap_file
[2024-06-24 22:35:29] -rw------- 1 boinc boinc      4294 Jun 24 22:35 pilotlog.txt
[2024-06-24 22:35:29] -rw------- 1 boinc boinc   5216161 Jun 24 22:35 log.38921001._063058.job.log.1
[2024-06-24 22:35:29] -rw------- 1 boinc boinc       357 Jun 24 22:35 output.list
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc       620 Jun 24 22:35 runtime_log
[2024-06-24 22:35:29] -rw------- 1 boinc boinc   5898240 Jun 24 22:35 result.tar.gz
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc     11410 Jun 24 22:35 runtime_log.err
[2024-06-24 22:35:29] -rw------- 1 boinc boinc       660 Jun 24 22:35 BibNDmyjSe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmajqKDmC15FQo.diag
[2024-06-24 22:35:29] -rw-r--r-- 1 boinc boinc     21352 Jun 24 22:35 stderr.txt
[2024-06-24 22:35:29] HITS file was successfully produced:
[2024-06-24 22:35:29] -rw------- 1 boinc boinc 353201016 Jun 24 22:34 shared/HITS.pool.root.1
[2024-06-24 22:35:29]  *** Contents of shared directory: ***
[2024-06-24 22:35:29] total 951280
[2024-06-24 22:35:29] -rw-r--r-- 2 boinc boinc 614496625 Jun 24 10:55 ATLAS.root_0
[2024-06-24 22:35:29] -rw-r--r-- 2 boinc boinc     17537 Jun 24 10:55 start_atlas.sh
[2024-06-24 22:35:29] -rw-r--r-- 2 boinc boinc    482527 Jun 24 10:55 input.tar.gz
[2024-06-24 22:35:29] -rw------- 1 boinc boinc 353201016 Jun 24 22:34 HITS.pool.root.1
[2024-06-24 22:35:29] -rw------- 1 boinc boinc   5898240 Jun 24 22:35 result.tar.gz
22:35:30 (3994895): run_atlas exited; CPU time 160738.766092
22:35:30 (3994895): called boinc_finish(0)

</stderr_txt>
]]>

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