Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:49:02 (3953427): wrapper (7.7.26015): starting
09:49:02 (3953427): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 09:49:02] Arguments: --nthreads 4
[2024-06-22 09:49:02] Threads: 4
[2024-06-22 09:49:02] Checking for CVMFS
[2024-06-22 09:49:02] No cvmfs_config command found, will try listing directly
[2024-06-22 09:49:02] CVMFS is ok
[2024-06-22 09:49:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 09:49:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 09:49:02] Further information can be found at the LHC@home message board.
[2024-06-22 09:49:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 09:49:02] Checking for apptainer binary...
[2024-06-22 09:49:02] which: no apptainer in ((null))
[2024-06-22 09:49:02] apptainer is not installed, using version from CVMFS
[2024-06-22 09:49:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 09:49:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-06-22 09:49:03] apptainer works
[2024-06-22 09:49:03] Set ATHENA_PROC_NUMBER=4
[2024-06-22 09:49:03] Set ATHENA_CORE_NUMBER=4
[2024-06-22 09:49:03] Starting ATLAS job with PandaID=6238817712
[2024-06-22 09:49:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 23:33:15]  *** The last 200 lines of the pilot log: ***
[2024-06-22 23:33:15] 2024-06-22 21:32:58,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 23:33:15] 2024-06-22 21:32:58,427 | INFO     | fitting pss+swap vs Time
[2024-06-22 23:33:15] 2024-06-22 21:32:58,428 | INFO     | model: linear, x: [1719042591.0, 1719042652.0, 1719042713.0, 1719042774.0, 1719042835.0, 1719042896.0, 1719042957.0, 1719043018.0, 1719043079.0, 1719043140.0, 1719
[2024-06-22 23:33:15] 2024-06-22 21:32:58,428 | INFO     | sum of square deviations: 164790745582.5
[2024-06-22 23:33:15] 2024-06-22 21:32:58,437 | INFO     | sum of deviations: 339235345339.5
[2024-06-22 23:33:15] 2024-06-22 21:32:58,437 | INFO     | mean x: 1719067265.5
[2024-06-22 23:33:15] 2024-06-22 21:32:58,437 | INFO     | mean y: 2361193.087654321
[2024-06-22 23:33:15] 2024-06-22 21:32:58,438 | INFO     | -- intersect: -3536480599.3464236
[2024-06-22 23:33:15] 2024-06-22 21:32:58,438 | INFO     | intersect: -3536480599.3464236
[2024-06-22 23:33:15] 2024-06-22 21:32:58,438 | INFO     | chi2: 4.084885767136644
[2024-06-22 23:33:15] 2024-06-22 21:32:58,439 | INFO     | model: linear, x: [1719042591.0, 1719042652.0, 1719042713.0, 1719042774.0, 1719042835.0, 1719042896.0, 1719042957.0, 1719043018.0, 1719043079.0, 1719043140.0, 1719
[2024-06-22 23:33:15] 2024-06-22 21:32:58,439 | INFO     | sum of square deviations: 161757860810.0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,448 | INFO     | sum of deviations: 389312137956.0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,448 | INFO     | mean x: 1719067113.0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,448 | INFO     | mean y: 2363697.9763975157
[2024-06-22 23:33:15] 2024-06-22 21:32:58,448 | INFO     | -- intersect: -4135016023.173481
[2024-06-22 23:33:15] 2024-06-22 21:32:58,448 | INFO     | intersect: -4135016023.173481
[2024-06-22 23:33:15] 2024-06-22 21:32:58,449 | INFO     | chi2: 3.2891562762907887
[2024-06-22 23:33:15] 2024-06-22 21:32:58,449 | INFO     | current chi2=3.2891562762907887 (change=19.479846835561148 %)
[2024-06-22 23:33:15] 2024-06-22 21:32:58,449 | INFO     | right removable region: 804
[2024-06-22 23:33:15] 2024-06-22 21:32:58,449 | INFO     | model: linear, x: [1719042896.0, 1719042957.0, 1719043018.0, 1719043079.0, 1719043140.0, 1719043201.0, 1719043262.0, 1719043323.0, 1719043384.0, 1719043445.0, 1719
[2024-06-22 23:33:15] 2024-06-22 21:32:58,449 | INFO     | sum of square deviations: 161757860810.0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,458 | INFO     | sum of deviations: 158569588816.00003
[2024-06-22 23:33:15] 2024-06-22 21:32:58,458 | INFO     | mean x: 1719067418.0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,458 | INFO     | mean y: 2370268.7167701866
[2024-06-22 23:33:15] 2024-06-22 21:32:58,458 | INFO     | -- intersect: -1682814069.4924738
[2024-06-22 23:33:15] 2024-06-22 21:32:58,458 | INFO     | intersect: -1682814069.4924738
[2024-06-22 23:33:15] 2024-06-22 21:32:58,459 | INFO     | chi2: 1.9521520217378039
[2024-06-22 23:33:15] 2024-06-22 21:32:58,459 | INFO     | current chi2=1.9521520217378039 (change=52.21036442577949 %)
[2024-06-22 23:33:15] 2024-06-22 21:32:58,459 | INFO     | model: linear, x: [1719043201.0, 1719043262.0, 1719043323.0, 1719043384.0, 1719043445.0, 1719043506.0, 1719043567.0, 1719043628.0, 1719043689.0, 1719043750.0, 1719
[2024-06-22 23:33:15] 2024-06-22 21:32:58,460 | INFO     | sum of square deviations: 158762418600.0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,468 | INFO     | sum of deviations: 25105309328.00004
[2024-06-22 23:33:15] 2024-06-22 21:32:58,468 | INFO     | mean x: 1719067570.5
[2024-06-22 23:33:15] 2024-06-22 21:32:58,468 | INFO     | mean y: 2377063.3375
[2024-06-22 23:33:15] 2024-06-22 21:32:58,468 | INFO     | -- intersect: -269461344.60381126
[2024-06-22 23:33:15] 2024-06-22 21:32:58,468 | INFO     | intersect: -269461344.60381126
[2024-06-22 23:33:15] 2024-06-22 21:32:58,469 | INFO     | chi2: 0.9067614972752345
[2024-06-22 23:33:15] 2024-06-22 21:32:58,469 | INFO     | current chi2=0.9067614972752345 (change=53.550671916010096 %)
[2024-06-22 23:33:15] 2024-06-22 21:32:58,469 | INFO     | model: linear, x: [1719043506.0, 1719043567.0, 1719043628.0, 1719043689.0, 1719043750.0, 1719043811.0, 1719043872.0, 1719043933.0, 1719043994.0, 1719044055.0, 1719
[2024-06-22 23:33:15] 2024-06-22 21:32:58,470 | INFO     | sum of square deviations: 155804186390.0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,478 | INFO     | sum of deviations: 15705289115.999992
[2024-06-22 23:33:15] 2024-06-22 21:32:58,478 | INFO     | mean x: 1719067723.0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,478 | INFO     | mean y: 2377544.4918238996
[2024-06-22 23:33:15] 2024-06-22 21:32:58,478 | INFO     | -- intersect: -170906988.00538272
[2024-06-22 23:33:15] 2024-06-22 21:32:58,478 | INFO     | intersect: -170906988.00538272
[2024-06-22 23:33:15] 2024-06-22 21:32:58,479 | INFO     | chi2: 0.8749943392217696
[2024-06-22 23:33:15] 2024-06-22 21:32:58,479 | INFO     | current chi2=0.8749943392217696 (change=3.5033642417464046 %)
[2024-06-22 23:33:15] 2024-06-22 21:32:58,479 | INFO     | left removable region: 30
[2024-06-22 23:33:15] 2024-06-22 21:32:58,480 | INFO     | model: linear, x: [1719044421.0, 1719044482.0, 1719044543.0, 1719044604.0, 1719044665.0, 1719044726.0, 1719044787.0, 1719044848.0, 1719044909.0, 1719044970.0, 1719
[2024-06-22 23:33:15] 2024-06-22 21:32:58,480 | INFO     | sum of square deviations: 143780695837.5
[2024-06-22 23:33:15] 2024-06-22 21:32:58,488 | INFO     | sum of deviations: 90950693261.5
[2024-06-22 23:33:15] 2024-06-22 21:32:58,488 | INFO     | mean x: 1719067997.5
[2024-06-22 23:33:15] 2024-06-22 21:32:58,488 | INFO     | mean y: 2378909.918604651
[2024-06-22 23:33:15] 2024-06-22 21:32:58,488 | INFO     | -- intersect: -1085044024.1934252
[2024-06-22 23:33:15] 2024-06-22 21:32:58,488 | INFO     | intersect: -1085044024.1934252
[2024-06-22 23:33:15] 2024-06-22 21:32:58,488 | INFO     | chi2: 0.01000322267789453
[2024-06-22 23:33:15] 2024-06-22 21:32:58,489 | INFO     | -- intersect: -1085044024.1934252
[2024-06-22 23:33:15] 2024-06-22 21:32:58,489 | INFO     | current memory leak: 0.63 B/s (using 774 data points, chi2=0.01)
[2024-06-22 23:33:15] 2024-06-22 21:32:58,489 | INFO     | ..............................
[2024-06-22 23:33:15] 2024-06-22 21:32:58,489 | INFO     | . Timing measurements:
[2024-06-22 23:33:15] 2024-06-22 21:32:58,489 | INFO     | . get job = 0 s
[2024-06-22 23:33:15] 2024-06-22 21:32:58,490 | INFO     | . initial setup = 1 s
[2024-06-22 23:33:15] 2024-06-22 21:32:58,490 | INFO     | . payload setup = 8 s
[2024-06-22 23:33:15] 2024-06-22 21:32:58,490 | INFO     | . stage-in = 0 s
[2024-06-22 23:33:15] 2024-06-22 21:32:58,490 | INFO     | . payload execution = 49383 s
[2024-06-22 23:33:15] 2024-06-22 21:32:58,490 | INFO     | . stage-out = 1 s
[2024-06-22 23:33:15] 2024-06-22 21:32:58,490 | INFO     | . log creation = 0 s
[2024-06-22 23:33:15] 2024-06-22 21:32:58,490 | INFO     | ..............................
[2024-06-22 23:33:15] 2024-06-22 21:32:58,545 | WARNING  | process 3964615 is no longer using CPU - aborting
[2024-06-22 23:33:15] 2024-06-22 21:32:58,556 | INFO     | aborting job monitoring since job object (job id=6238817712) has expired
[2024-06-22 23:33:15] 2024-06-22 21:32:58,556 | INFO     | 
[2024-06-22 23:33:15] 2024-06-22 21:32:58,557 | INFO     | job summary report
[2024-06-22 23:33:15] 2024-06-22 21:32:58,557 | INFO     | --------------------------------------------------
[2024-06-22 23:33:15] 2024-06-22 21:32:58,557 | INFO     | PanDA job id: 6238817712
[2024-06-22 23:33:15] 2024-06-22 21:32:58,557 | INFO     | task id: 38921013
[2024-06-22 23:33:15] 2024-06-22 21:32:58,557 | INFO     | errors: (none)
[2024-06-22 23:33:15] 2024-06-22 21:32:58,557 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 23:33:15] 2024-06-22 21:32:58,557 | INFO     | pilot state: finished 
[2024-06-22 23:33:15] 2024-06-22 21:32:58,558 | INFO     | transexitcode: 0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,558 | INFO     | exeerrorcode: 0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,558 | INFO     | exeerrordiag: 
[2024-06-22 23:33:15] 2024-06-22 21:32:58,558 | INFO     | exitcode: 0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,558 | INFO     | exitmsg: OK
[2024-06-22 23:33:15] 2024-06-22 21:32:58,558 | INFO     | cpuconsumptiontime: 193171 s
[2024-06-22 23:33:15] 2024-06-22 21:32:58,558 | INFO     | nevents: 400
[2024-06-22 23:33:15] 2024-06-22 21:32:58,558 | INFO     | neventsw: 0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,559 | INFO     | pid: 3964615
[2024-06-22 23:33:15] 2024-06-22 21:32:58,559 | INFO     | pgrp: 3964615
[2024-06-22 23:33:15] 2024-06-22 21:32:58,559 | INFO     | corecount: 4
[2024-06-22 23:33:15] 2024-06-22 21:32:58,559 | INFO     | event service: False
[2024-06-22 23:33:15] 2024-06-22 21:32:58,559 | INFO     | sizes: {0: 2387093, 7: 2387299, 11: 2387327, 49396: 2434103, 49397: 2443085, 49398: 2443141, 49403: 2443439}
[2024-06-22 23:33:15] 2024-06-22 21:32:58,559 | INFO     | --------------------------------------------------
[2024-06-22 23:33:15] 2024-06-22 21:32:58,559 | INFO     | 
[2024-06-22 23:33:15] 2024-06-22 21:32:58,560 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2024-06-22 23:33:15] 2024-06-22 21:32:58,574 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,575 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,575 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,575 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,575 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,577 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 23:33:15] 2024-06-22 21:32:58,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,577 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 23:33:15] 2024-06-22 21:32:58,577 | INFO     | job 6238817712 has completed (purged errors)
[2024-06-22 23:33:15] 2024-06-22 21:32:58,577 | INFO     | overall cleanup function is called
[2024-06-22 23:33:15] 2024-06-22 21:32:59,585 | INFO     | --- collectZombieJob: --- 10, [3964615]
[2024-06-22 23:33:15] 2024-06-22 21:32:59,585 | INFO     | zombie collector waiting for pid 3964615
[2024-06-22 23:33:15] 2024-06-22 21:32:59,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 23:33:15] 2024-06-22 21:33:00,590 | INFO     | collected zombie processes
[2024-06-22 23:33:15] 2024-06-22 21:33:00,591 | INFO     | will now attempt to kill all subprocesses of pid=3964615
[2024-06-22 23:33:15] 2024-06-22 21:33:00,677 | INFO     | process IDs to be killed: [3964615] (in reverse order)
[2024-06-22 23:33:15] 2024-06-22 21:33:00,761 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 23:33:15] 2024-06-22 21:33:00,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 23:33:15] 2024-06-22 21:33:00,765 | INFO     | did not find any defunct processes belonging to 3964615
[2024-06-22 23:33:15] 2024-06-22 21:33:00,768 | INFO     | did not find any defunct processes belonging to 3964615
[2024-06-22 23:33:15] 2024-06-22 21:33:00,768 | INFO     | ready for new job
[2024-06-22 23:33:15] 2024-06-22 21:33:00,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 23:33:15] 2024-06-22 21:33:00,771 | INFO     | *************************************
[2024-06-22 23:33:15] 2024-06-22 21:33:00,771 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 23:33:15] 2024-06-22 21:33:00,771 | INFO     | *************************************
[2024-06-22 23:33:15] 2024-06-22 21:33:00,771 | INFO     | 
[2024-06-22 23:33:15] 2024-06-22 21:33:00,772 | INFO     | architecture information:
[2024-06-22 23:33:15] 2024-06-22 21:33:00,772 | INFO     | executing command: cat /etc/os-release
[2024-06-22 23:33:15] 2024-06-22 21:33:00,785 | INFO     | cat /etc/os-release:
[2024-06-22 23:33:15] NAME="CentOS Linux"
[2024-06-22 23:33:15] VERSION="7 (Core)"
[2024-06-22 23:33:15] ID="centos"
[2024-06-22 23:33:15] ID_LIKE="rhel fedora"
[2024-06-22 23:33:15] VERSION_ID="7"
[2024-06-22 23:33:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 23:33:15] ANSI_COLOR="0;31"
[2024-06-22 23:33:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 23:33:15] HOME_URL="https://www.centos.org/"
[2024-06-22 23:33:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 23:33:15] 
[2024-06-22 23:33:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 23:33:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 23:33:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 23:33:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 23:33:15] 
[2024-06-22 23:33:15] 2024-06-22 21:33:00,785 | INFO     | *************************************
[2024-06-22 23:33:15] 2024-06-22 21:33:01,288 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2024-06-22 23:33:15] 2024-06-22 21:33:01,307 | INFO     | sufficient remaining disk space (1666615083008 B)
[2024-06-22 23:33:15] 2024-06-22 21:33:01,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 23:33:15] 2024-06-22 21:33:01,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 23:33:15] 2024-06-22 21:33:01,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 23:33:15] 2024-06-22 21:33:01,381 | INFO     | all payload control threads have been joined
[2024-06-22 23:33:15] 2024-06-22 21:33:01,668 | INFO     | all data control threads have been joined
[2024-06-22 23:33:15] 2024-06-22 21:33:01,713 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 23:33:15] 2024-06-22 21:33:01,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 23:33:15] 2024-06-22 21:33:01,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 23:33:15] 2024-06-22 21:33:01,752 | INFO     | all job control threads have been joined
[2024-06-22 23:33:15] 2024-06-22 21:33:02,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 23:33:15] 2024-06-22 21:33:02,064 | INFO     | aborting loop
[2024-06-22 23:33:15] 2024-06-22 21:33:02,313 | INFO     | [job] retrieve thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:02,386 | INFO     | [payload] control thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:02,444 | INFO     | [job] validate thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:02,673 | INFO     | [data] control thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:02,757 | INFO     | [job] control thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:02,801 | INFO     | [payload] failed_post thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:02,865 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:03,069 | INFO     | [job] job monitor thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:03,092 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:03,092 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:03,170 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:03,313 | INFO     | [data] copytool_out thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:03,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 23:33:15] 2024-06-22 21:33:03,616 | INFO     | [data] copytool_in thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:03,885 | INFO     | [payload] validate_post thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:04,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 23:33:15] 2024-06-22 21:33:04,571 | INFO     | [job] queue monitor thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:08,260 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 23:33:15] 2024-06-22 21:33:09,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47898079499328)>', '<ExcThread(monitor, started 47898263975680)>']
[2024-06-22 23:33:15] 2024-06-22 21:33:09,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 23:33:15] 2024-06-22 21:33:09,748 | INFO     | [monitor] control thread has ended
[2024-06-22 23:33:15] 2024-06-22 21:33:14,482 | INFO     | all workflow threads have been joined
[2024-06-22 23:33:15] 2024-06-22 21:33:14,482 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 23:33:15] 2024-06-22 21:33:14,482 | INFO     | traces error code: 0
[2024-06-22 23:33:15] 2024-06-22 21:33:14,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 23:33:15] 2024-06-22 21:33:14,555 [wrapper] ==== pilot stdout END ====
[2024-06-22 23:33:15] 2024-06-22 21:33:14,557 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 23:33:15] 2024-06-22 21:33:14,560 [wrapper] pilotpid: 3957653
[2024-06-22 23:33:15] 2024-06-22 21:33:14,562 [wrapper] Pilot exit status: 0
[2024-06-22 23:33:15] 2024-06-22 21:33:14,569 [wrapper] pandaids: 6238817712
[2024-06-22 23:33:15] 2024-06-22 21:33:14,623 [wrapper] cleanup supervisor_pilot  969357 3957654
[2024-06-22 23:33:15] 2024-06-22 21:33:14,626 [wrapper] Test setup, not cleaning
[2024-06-22 23:33:15] 2024-06-22 21:33:14,627 [wrapper] ==== wrapper stdout END ====
[2024-06-22 23:33:15] 2024-06-22 21:33:14,630 [wrapper] ==== wrapper stderr END ====
[2024-06-22 23:33:15] 2024-06-22 21:33:14,634 [wrapper] apfmon messages muted
[2024-06-22 23:33:15]  *** Error codes and diagnostics ***
[2024-06-22 23:33:15]     "exeErrorCode": 0,
[2024-06-22 23:33:15]     "exeErrorDiag": "",
[2024-06-22 23:33:15]     "pilotErrorCode": 0,
[2024-06-22 23:33:15]     "pilotErrorDiag": "",
[2024-06-22 23:33:15]  *** Listing of results directory ***
[2024-06-22 23:33:15] total 883756
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-22 23:33:15] -rwx------ 1 boinc boinc     32308 Jun 20 10:48 runpilot2-wrapper.sh
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc      5654 Jun 20 10:48 queuedata.json
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc       100 Jun 22 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 23:33:15] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 09:48 run_atlas
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc       105 Jun 22 09:48 job.xml
[2024-06-22 23:33:15] -rw-r--r-- 2 boinc boinc 543132744 Jun 22 09:49 EVNT.38776210._000938.pool.root.1
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc      6454 Jun 22 09:49 init_data.xml
[2024-06-22 23:33:15] -rw-r--r-- 2 boinc boinc     17537 Jun 22 09:49 start_atlas.sh
[2024-06-22 23:33:15] drwxrwx--x 2 boinc boinc      4096 Jun 22 09:49 shared
[2024-06-22 23:33:15] -rw-r--r-- 2 boinc boinc    482533 Jun 22 09:49 input.tar.gz
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc         0 Jun 22 09:49 boinc_lockfile
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc      2646 Jun 22 09:49 pandaJob.out
[2024-06-22 23:33:15] -rw------- 1 boinc boinc       424 Jun 22 09:49 setup.sh.local
[2024-06-22 23:33:15] -rw------- 1 boinc boinc   1025953 Jun 22 09:49 agis_schedconf.cvmfs.json
[2024-06-22 23:33:15] -rw------- 1 boinc boinc   1321363 Jun 22 09:49 cric_ddmendpoints.json
[2024-06-22 23:33:15] drwx------ 4 boinc boinc      4096 Jun 22 09:49 pilot3
[2024-06-22 23:33:15] -rw------- 1 boinc boinc        95 Jun 22 23:32 pilot_heartbeat.json
[2024-06-22 23:33:15] -rw------- 1 boinc boinc 342379434 Jun 22 23:32 HITS.38921013._050145.pool.root.1
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc       533 Jun 22 23:32 boinc_task_state.xml
[2024-06-22 23:33:15] -rw------- 1 boinc boinc      1045 Jun 22 23:32 memory_monitor_summary.json
[2024-06-22 23:33:15] -rw------- 1 boinc boinc         0 Jun 22 23:32 agis_ddmendpoints.agis.ALL.json
[2024-06-22 23:33:15] -rw------- 1 boinc boinc    776327 Jun 22 23:32 log.38921013._050145.job.log.tgz.1
[2024-06-22 23:33:15] -rw------- 1 boinc boinc      7767 Jun 22 23:32 heartbeat.json
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc      8192 Jun 22 23:33 boinc_mmap_file
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc        29 Jun 22 23:33 wrapper_checkpoint.txt
[2024-06-22 23:33:15] -rw------- 1 boinc boinc      4222 Jun 22 23:33 pilotlog.txt
[2024-06-22 23:33:15] -rw------- 1 boinc boinc   7181881 Jun 22 23:33 log.38921013._050145.job.log.1
[2024-06-22 23:33:15] -rw------- 1 boinc boinc       357 Jun 22 23:33 output.list
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc       620 Jun 22 23:33 runtime_log
[2024-06-22 23:33:15] -rw------- 1 boinc boinc   7976960 Jun 22 23:33 result.tar.gz
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc     11410 Jun 22 23:33 runtime_log.err
[2024-06-22 23:33:15] -rw------- 1 boinc boinc       660 Jun 22 23:33 1Z5MDm1dSe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm5BXKDmjYUeKo.diag
[2024-06-22 23:33:15] -rw-r--r-- 1 boinc boinc     21335 Jun 22 23:33 stderr.txt
[2024-06-22 23:33:15] HITS file was successfully produced:
[2024-06-22 23:33:15] -rw------- 1 boinc boinc 342379434 Jun 22 23:32 shared/HITS.pool.root.1
[2024-06-22 23:33:15]  *** Contents of shared directory: ***
[2024-06-22 23:33:15] total 873052
[2024-06-22 23:33:15] -rw-r--r-- 2 boinc boinc 543132744 Jun 22 09:49 ATLAS.root_0
[2024-06-22 23:33:15] -rw-r--r-- 2 boinc boinc     17537 Jun 22 09:49 start_atlas.sh
[2024-06-22 23:33:15] -rw-r--r-- 2 boinc boinc    482533 Jun 22 09:49 input.tar.gz
[2024-06-22 23:33:15] -rw------- 1 boinc boinc 342379434 Jun 22 23:32 HITS.pool.root.1
[2024-06-22 23:33:15] -rw------- 1 boinc boinc   7976960 Jun 22 23:33 result.tar.gz
23:33:16 (3953427): run_atlas exited; CPU time 192744.070742
23:33:16 (3953427): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN