Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:01:17 (582205): wrapper (7.7.26015): starting
20:01:17 (582205): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 20:01:17] Arguments: --nthreads 4
[2024-06-22 20:01:17] Threads: 4
[2024-06-22 20:01:17] Checking for CVMFS
[2024-06-22 20:01:17] No cvmfs_config command found, will try listing directly
[2024-06-22 20:01:17] CVMFS is ok
[2024-06-22 20:01:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 20:01:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 20:01:17] Further information can be found at the LHC@home message board.
[2024-06-22 20:01:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 20:01:17] Checking for apptainer binary...
[2024-06-22 20:01:17] which: no apptainer in ((null))
[2024-06-22 20:01:17] apptainer is not installed, using version from CVMFS
[2024-06-22 20:01:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 20:01:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2024-06-22 20:01:18] apptainer works
[2024-06-22 20:01:18] Set ATHENA_PROC_NUMBER=4
[2024-06-22 20:01:18] Set ATHENA_CORE_NUMBER=4
[2024-06-22 20:01:18] Starting ATLAS job with PandaID=6238817232
[2024-06-22 20:01:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 01:41:11]  *** The last 200 lines of the pilot log: ***
[2024-06-23 01:41:11] 2024-06-22 23:40:48,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 01:41:11] 2024-06-22 23:40:48,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 01:41:11] 2024-06-22 23:40:48,600 | INFO     | fitting pss+swap vs Time
[2024-06-23 01:41:11] 2024-06-22 23:40:48,601 | INFO     | model: linear, x: [1719079368.0, 1719079429.0, 1719079490.0, 1719079551.0, 1719079612.0, 1719079673.0, 1719079734.0, 1719079795.0, 1719079856.0, 1719079917.0, 1719
[2024-06-23 01:41:11] 2024-06-22 23:40:48,601 | INFO     | sum of square deviations: 11450045382.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,604 | INFO     | sum of deviations: 146946052357.99988
[2024-06-23 01:41:11] 2024-06-22 23:40:48,604 | INFO     | mean x: 1719089494.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,605 | INFO     | mean y: 2336107.966966967
[2024-06-23 01:41:11] 2024-06-22 23:40:48,605 | INFO     | -- intersect: -22059883417.427357
[2024-06-23 01:41:11] 2024-06-22 23:40:48,605 | INFO     | intersect: -22059883417.427357
[2024-06-23 01:41:11] 2024-06-22 23:40:48,605 | INFO     | chi2: 4.704858337564919
[2024-06-23 01:41:11] 2024-06-22 23:40:48,606 | INFO     | model: linear, x: [1719079368.0, 1719079429.0, 1719079490.0, 1719079551.0, 1719079612.0, 1719079673.0, 1719079734.0, 1719079795.0, 1719079856.0, 1719079917.0, 1719
[2024-06-23 01:41:11] 2024-06-22 23:40:48,606 | INFO     | sum of square deviations: 10941980042.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,609 | INFO     | sum of deviations: 165320643096.99997
[2024-06-23 01:41:11] 2024-06-22 23:40:48,610 | INFO     | mean x: 1719089341.5
[2024-06-23 01:41:11] 2024-06-22 23:40:48,610 | INFO     | mean y: 2341547.3353658537
[2024-06-23 01:41:11] 2024-06-22 23:40:48,610 | INFO     | -- intersect: -25971106986.393757
[2024-06-23 01:41:11] 2024-06-22 23:40:48,610 | INFO     | intersect: -25971106986.393757
[2024-06-23 01:41:11] 2024-06-22 23:40:48,611 | INFO     | chi2: 3.9644218939272413
[2024-06-23 01:41:11] 2024-06-22 23:40:48,611 | INFO     | current chi2=3.9644218939272413 (change=15.73769900202571 %)
[2024-06-23 01:41:11] 2024-06-22 23:40:48,611 | INFO     | right removable region: 327
[2024-06-23 01:41:11] 2024-06-22 23:40:48,611 | INFO     | model: linear, x: [1719079673.0, 1719079734.0, 1719079795.0, 1719079856.0, 1719079917.0, 1719079978.0, 1719080039.0, 1719080100.0, 1719080161.0, 1719080222.0, 1719
[2024-06-23 01:41:11] 2024-06-22 23:40:48,612 | INFO     | sum of square deviations: 10941980042.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,615 | INFO     | sum of deviations: 71512959081.50002
[2024-06-23 01:41:11] 2024-06-22 23:40:48,615 | INFO     | mean x: 1719089646.5
[2024-06-23 01:41:11] 2024-06-22 23:40:48,615 | INFO     | mean y: 2358707.7469512196
[2024-06-23 01:41:11] 2024-06-22 23:40:48,615 | INFO     | -- intersect: -11233010674.732208
[2024-06-23 01:41:11] 2024-06-22 23:40:48,615 | INFO     | intersect: -11233010674.732208
[2024-06-23 01:41:11] 2024-06-22 23:40:48,616 | INFO     | chi2: 2.4322644287669792
[2024-06-23 01:41:11] 2024-06-22 23:40:48,616 | INFO     | current chi2=2.4322644287669792 (change=48.303131481194825 %)
[2024-06-23 01:41:11] 2024-06-22 23:40:48,617 | INFO     | model: linear, x: [1719079978.0, 1719080039.0, 1719080100.0, 1719080161.0, 1719080222.0, 1719080283.0, 1719080344.0, 1719080405.0, 1719080466.0, 1719080527.0, 1719
[2024-06-23 01:41:11] 2024-06-22 23:40:48,617 | INFO     | sum of square deviations: 10449170802.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,620 | INFO     | sum of deviations: 5740482043.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,620 | INFO     | mean x: 1719089799.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,620 | INFO     | mean y: 2379061.133126935
[2024-06-23 01:41:11] 2024-06-22 23:40:48,620 | INFO     | -- intersect: -942040769.7280108
[2024-06-23 01:41:11] 2024-06-22 23:40:48,620 | INFO     | intersect: -942040769.7280108
[2024-06-23 01:41:11] 2024-06-22 23:40:48,621 | INFO     | chi2: 0.8750592160819505
[2024-06-23 01:41:11] 2024-06-22 23:40:48,621 | INFO     | current chi2=0.8750592160819505 (change=64.02285846339676 %)
[2024-06-23 01:41:11] 2024-06-22 23:40:48,622 | INFO     | model: linear, x: [1719080283.0, 1719080344.0, 1719080405.0, 1719080466.0, 1719080527.0, 1719080588.0, 1719080649.0, 1719080710.0, 1719080771.0, 1719080832.0, 1719
[2024-06-23 01:41:11] 2024-06-22 23:40:48,622 | INFO     | sum of square deviations: 9971385099.5
[2024-06-23 01:41:11] 2024-06-22 23:40:48,625 | INFO     | sum of deviations: -8918798288.000002
[2024-06-23 01:41:11] 2024-06-22 23:40:48,625 | INFO     | mean x: 1719089951.5
[2024-06-23 01:41:11] 2024-06-22 23:40:48,625 | INFO     | mean y: 2383714.2075471696
[2024-06-23 01:41:11] 2024-06-22 23:40:48,625 | INFO     | -- intersect: 1540005254.581614
[2024-06-23 01:41:11] 2024-06-22 23:40:48,625 | INFO     | intersect: 1540005254.581614
[2024-06-23 01:41:11] 2024-06-22 23:40:48,626 | INFO     | chi2: 0.7661721092613424
[2024-06-23 01:41:11] 2024-06-22 23:40:48,626 | INFO     | current chi2=0.7661721092613424 (change=12.44339866599504 %)
[2024-06-23 01:41:11] 2024-06-22 23:40:48,626 | INFO     | left removable region: 30
[2024-06-23 01:41:11] 2024-06-22 23:40:48,627 | INFO     | model: linear, x: [1719081198.0, 1719081259.0, 1719081320.0, 1719081381.0, 1719081442.0, 1719081503.0, 1719081564.0, 1719081625.0, 1719081686.0, 1719081747.0, 1719
[2024-06-23 01:41:11] 2024-06-22 23:40:48,627 | INFO     | sum of square deviations: 8123493708.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,629 | INFO     | sum of deviations: 6496756993.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,630 | INFO     | mean x: 1719090226.0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,630 | INFO     | mean y: 2391695.65993266
[2024-06-23 01:41:11] 2024-06-22 23:40:48,630 | INFO     | -- intersect: -1372449210.090351
[2024-06-23 01:41:11] 2024-06-22 23:40:48,630 | INFO     | intersect: -1372449210.090351
[2024-06-23 01:41:11] 2024-06-22 23:40:48,631 | INFO     | chi2: 0.0005006699508600813
[2024-06-23 01:41:11] 2024-06-22 23:40:48,631 | INFO     | -- intersect: -1372449210.090351
[2024-06-23 01:41:11] 2024-06-22 23:40:48,631 | INFO     | current memory leak: 0.80 B/s (using 297 data points, chi2=0.00)
[2024-06-23 01:41:11] 2024-06-22 23:40:48,631 | INFO     | ..............................
[2024-06-23 01:41:11] 2024-06-22 23:40:48,632 | INFO     | . Timing measurements:
[2024-06-23 01:41:11] 2024-06-22 23:40:48,632 | INFO     | . get job = 0 s
[2024-06-23 01:41:11] 2024-06-22 23:40:48,632 | INFO     | . initial setup = 1 s
[2024-06-23 01:41:11] 2024-06-22 23:40:48,632 | INFO     | . payload setup = 12 s
[2024-06-23 01:41:11] 2024-06-22 23:40:48,632 | INFO     | . stage-in = 0 s
[2024-06-23 01:41:11] 2024-06-22 23:40:48,632 | INFO     | . payload execution = 20275 s
[2024-06-23 01:41:11] 2024-06-22 23:40:48,632 | INFO     | . stage-out = 1 s
[2024-06-23 01:41:11] 2024-06-22 23:40:48,632 | INFO     | . log creation = 0 s
[2024-06-23 01:41:11] 2024-06-22 23:40:48,633 | INFO     | ..............................
[2024-06-23 01:41:11] 2024-06-22 23:40:48,742 | INFO     | 
[2024-06-23 01:41:11] 2024-06-22 23:40:48,742 | INFO     | job summary report
[2024-06-23 01:41:11] 2024-06-22 23:40:48,742 | INFO     | --------------------------------------------------
[2024-06-23 01:41:11] 2024-06-22 23:40:48,743 | INFO     | PanDA job id: 6238817232
[2024-06-23 01:41:11] 2024-06-22 23:40:48,743 | INFO     | task id: 40024040
[2024-06-23 01:41:11] 2024-06-22 23:40:48,743 | INFO     | errors: (none)
[2024-06-23 01:41:11] 2024-06-22 23:40:48,743 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 01:41:11] 2024-06-22 23:40:48,743 | INFO     | pilot state: finished 
[2024-06-23 01:41:11] 2024-06-22 23:40:48,743 | INFO     | transexitcode: 0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,743 | INFO     | exeerrorcode: 0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,743 | INFO     | exeerrordiag: 
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | exitcode: 0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | exitmsg: OK
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | cpuconsumptiontime: 76261 s
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | nevents: 400
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | neventsw: 0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | pid: 593690
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | pgrp: 593690
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | corecount: 4
[2024-06-23 01:41:11] 2024-06-22 23:40:48,744 | INFO     | event service: False
[2024-06-23 01:41:11] 2024-06-22 23:40:48,745 | INFO     | sizes: {0: 2386695, 1: 2386894, 12: 2386894, 15: 2387128, 23: 2387156, 20291: 2420518, 20293: 2429556, 20305: 2429670}
[2024-06-23 01:41:11] 2024-06-22 23:40:48,745 | INFO     | --------------------------------------------------
[2024-06-23 01:41:11] 2024-06-22 23:40:48,745 | INFO     | 
[2024-06-23 01:41:11] 2024-06-22 23:40:48,745 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-06-23 01:41:11] 2024-06-22 23:40:48,768 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,768 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,768 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,768 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,770 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 01:41:11] 2024-06-22 23:40:48,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,771 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 01:41:11] 2024-06-22 23:40:48,771 | INFO     | job 6238817232 has completed (purged errors)
[2024-06-23 01:41:11] 2024-06-22 23:40:48,771 | INFO     | overall cleanup function is called
[2024-06-23 01:41:11] 2024-06-22 23:40:49,778 | INFO     | --- collectZombieJob: --- 10, [593690]
[2024-06-23 01:41:11] 2024-06-22 23:40:49,778 | INFO     | zombie collector waiting for pid 593690
[2024-06-23 01:41:11] 2024-06-22 23:40:49,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 01:41:11] 2024-06-22 23:40:50,783 | INFO     | collected zombie processes
[2024-06-23 01:41:11] 2024-06-22 23:40:50,783 | INFO     | will now attempt to kill all subprocesses of pid=593690
[2024-06-23 01:41:11] 2024-06-22 23:40:50,921 | INFO     | process IDs to be killed: [593690] (in reverse order)
[2024-06-23 01:41:11] 2024-06-22 23:40:51,016 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 01:41:11] 2024-06-22 23:40:51,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 01:41:11] 2024-06-22 23:40:51,022 | INFO     | did not find any defunct processes belonging to 593690
[2024-06-23 01:41:11] 2024-06-22 23:40:51,027 | INFO     | did not find any defunct processes belonging to 593690
[2024-06-23 01:41:11] 2024-06-22 23:40:51,028 | INFO     | ready for new job
[2024-06-23 01:41:11] 2024-06-22 23:40:51,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 01:41:11] 2024-06-22 23:40:51,030 | INFO     | *************************************
[2024-06-23 01:41:11] 2024-06-22 23:40:51,030 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 01:41:11] 2024-06-22 23:40:51,030 | INFO     | *************************************
[2024-06-23 01:41:11] 2024-06-22 23:40:51,030 | INFO     | 
[2024-06-23 01:41:11] 2024-06-22 23:40:51,032 | INFO     | architecture information:
[2024-06-23 01:41:11] 2024-06-22 23:40:51,033 | INFO     | executing command: cat /etc/os-release
[2024-06-23 01:41:11] 2024-06-22 23:40:51,055 | INFO     | cat /etc/os-release:
[2024-06-23 01:41:11] NAME="CentOS Linux"
[2024-06-23 01:41:11] VERSION="7 (Core)"
[2024-06-23 01:41:11] ID="centos"
[2024-06-23 01:41:11] ID_LIKE="rhel fedora"
[2024-06-23 01:41:11] VERSION_ID="7"
[2024-06-23 01:41:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 01:41:11] ANSI_COLOR="0;31"
[2024-06-23 01:41:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 01:41:11] HOME_URL="https://www.centos.org/"
[2024-06-23 01:41:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 01:41:11] 
[2024-06-23 01:41:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 01:41:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 01:41:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 01:41:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 01:41:11] 
[2024-06-23 01:41:11] 2024-06-22 23:40:51,056 | INFO     | *************************************
[2024-06-23 01:41:11] 2024-06-22 23:40:51,558 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-06-23 01:41:11] 2024-06-22 23:40:51,576 | INFO     | sufficient remaining disk space (1661930045440 B)
[2024-06-23 01:41:11] 2024-06-22 23:40:51,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 01:41:11] 2024-06-22 23:40:51,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 01:41:11] 2024-06-22 23:40:51,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 01:41:11] 2024-06-22 23:40:51,699 | INFO     | all job control threads have been joined
[2024-06-23 01:41:11] 2024-06-22 23:40:51,766 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 01:41:11] 2024-06-22 23:40:51,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 01:41:11] 2024-06-22 23:40:51,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 01:41:11] 2024-06-22 23:40:51,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 01:41:11] 2024-06-22 23:40:52,152 | INFO     | all data control threads have been joined
[2024-06-23 01:41:11] 2024-06-22 23:40:52,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 01:41:11] 2024-06-22 23:40:52,267 | INFO     | aborting loop
[2024-06-23 01:41:11] 2024-06-22 23:40:52,473 | INFO     | all payload control threads have been joined
[2024-06-23 01:41:11] 2024-06-22 23:40:52,582 | INFO     | [job] retrieve thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:52,704 | INFO     | [job] control thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:52,882 | INFO     | [payload] failed_post thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,022 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,033 | INFO     | [payload] validate_post thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,114 | INFO     | [job] validate thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,157 | INFO     | [data] control thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,272 | INFO     | [job] job monitor thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,375 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,478 | INFO     | [payload] control thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,562 | INFO     | [data] copytool_in thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:53,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 01:41:11] 2024-06-22 23:40:53,940 | INFO     | [data] copytool_out thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:54,024 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:54,757 | INFO     | [job] queue monitor thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:40:55,583 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:41:02,274 | INFO     | job.realtimelogging is not enabled
[2024-06-23 01:41:11] 2024-06-22 23:41:03,279 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 01:41:11] 2024-06-22 23:41:05,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47102175450176)>', '<ExcThread(monitor, started 47102355724032)>']
[2024-06-23 01:41:11] 2024-06-22 23:41:05,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 01:41:11] 2024-06-22 23:41:05,836 | INFO     | [monitor] control thread has ended
[2024-06-23 01:41:11] 2024-06-22 23:41:10,170 | INFO     | all workflow threads have been joined
[2024-06-23 01:41:11] 2024-06-22 23:41:10,170 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 01:41:11] 2024-06-22 23:41:10,170 | INFO     | traces error code: 0
[2024-06-23 01:41:11] 2024-06-22 23:41:10,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 01:41:11] 2024-06-22 23:41:10,280 [wrapper] ==== pilot stdout END ====
[2024-06-23 01:41:11] 2024-06-22 23:41:10,290 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 01:41:11] 2024-06-22 23:41:10,300 [wrapper] pilotpid: 586518
[2024-06-23 01:41:11] 2024-06-22 23:41:10,320 [wrapper] Pilot exit status: 0
[2024-06-23 01:41:11] 2024-06-22 23:41:10,358 [wrapper] pandaids: 6238817232
[2024-06-23 01:41:11] 2024-06-22 23:41:10,426 [wrapper] cleanup supervisor_pilot 1140216 586519
[2024-06-23 01:41:11] 2024-06-22 23:41:10,429 [wrapper] Test setup, not cleaning
[2024-06-23 01:41:11] 2024-06-22 23:41:10,435 [wrapper] ==== wrapper stdout END ====
[2024-06-23 01:41:11] 2024-06-22 23:41:10,437 [wrapper] ==== wrapper stderr END ====
[2024-06-23 01:41:11] 2024-06-22 23:41:10,442 [wrapper] apfmon messages muted
[2024-06-23 01:41:11]  *** Error codes and diagnostics ***
[2024-06-23 01:41:11]     "exeErrorCode": 0,
[2024-06-23 01:41:11]     "exeErrorDiag": "",
[2024-06-23 01:41:11]     "pilotErrorCode": 0,
[2024-06-23 01:41:11]     "pilotErrorDiag": "",
[2024-06-23 01:41:11]  *** Listing of results directory ***
[2024-06-23 01:41:11] total 878556
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc      5654 Jun 20 10:44 queuedata.json
[2024-06-23 01:41:11] -rwx------ 1 boinc boinc     32308 Jun 20 10:46 runpilot2-wrapper.sh
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc       100 Jun 22 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 01:41:11] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 20:01 run_atlas
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc       105 Jun 22 20:01 job.xml
[2024-06-23 01:41:11] -rw-r--r-- 2 boinc boinc 612546211 Jun 22 20:01 EVNT.40024038._000009.pool.root.1
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc      6455 Jun 22 20:01 init_data.xml
[2024-06-23 01:41:11] -rw-r--r-- 2 boinc boinc     17537 Jun 22 20:01 start_atlas.sh
[2024-06-23 01:41:11] drwxrwx--x 2 boinc boinc      4096 Jun 22 20:01 shared
[2024-06-23 01:41:11] -rw-r--r-- 2 boinc boinc    482476 Jun 22 20:01 input.tar.gz
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc         0 Jun 22 20:01 boinc_lockfile
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc      2484 Jun 22 20:01 pandaJob.out
[2024-06-23 01:41:11] -rw------- 1 boinc boinc       424 Jun 22 20:01 setup.sh.local
[2024-06-23 01:41:11] -rw------- 1 boinc boinc   1025675 Jun 22 20:01 agis_schedconf.cvmfs.json
[2024-06-23 01:41:11] -rw------- 1 boinc boinc   1321363 Jun 22 20:01 cric_ddmendpoints.json
[2024-06-23 01:41:11] drwx------ 4 boinc boinc      4096 Jun 22 20:01 pilot3
[2024-06-23 01:41:11] -rw------- 1 boinc boinc 278346534 Jun 23 01:39 HITS.40024040._000226.pool.root.1
[2024-06-23 01:41:11] -rw------- 1 boinc boinc        95 Jun 23 01:39 pilot_heartbeat.json
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc       532 Jun 23 01:39 boinc_task_state.xml
[2024-06-23 01:41:11] -rw------- 1 boinc boinc      1061 Jun 23 01:40 memory_monitor_summary.json
[2024-06-23 01:41:11] -rw------- 1 boinc boinc         0 Jun 23 01:40 agis_ddmendpoints.agis.ALL.json
[2024-06-23 01:41:11] -rw------- 1 boinc boinc    393421 Jun 23 01:40 log.40024040._000226.job.log.tgz.1
[2024-06-23 01:41:11] -rw------- 1 boinc boinc      7759 Jun 23 01:40 heartbeat.json
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc        28 Jun 23 01:41 wrapper_checkpoint.txt
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc      8192 Jun 23 01:41 boinc_mmap_file
[2024-06-23 01:41:11] -rw------- 1 boinc boinc      4294 Jun 23 01:41 pilotlog.txt
[2024-06-23 01:41:11] -rw------- 1 boinc boinc   2213721 Jun 23 01:41 log.40024040._000226.job.log.1
[2024-06-23 01:41:11] -rw------- 1 boinc boinc       357 Jun 23 01:41 output.list
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc       620 Jun 23 01:41 runtime_log
[2024-06-23 01:41:11] -rw------- 1 boinc boinc   2621440 Jun 23 01:41 result.tar.gz
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc     11410 Jun 23 01:41 runtime_log.err
[2024-06-23 01:41:11] -rw------- 1 boinc boinc       659 Jun 23 01:41 2bSMDm6bSe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmwBXKDmSqy9Un.diag
[2024-06-23 01:41:11] -rw-r--r-- 1 boinc boinc     21031 Jun 23 01:41 stderr.txt
[2024-06-23 01:41:11] HITS file was successfully produced:
[2024-06-23 01:41:11] -rw------- 1 boinc boinc 278346534 Jun 23 01:39 shared/HITS.pool.root.1
[2024-06-23 01:41:11]  *** Contents of shared directory: ***
[2024-06-23 01:41:11] total 873076
[2024-06-23 01:41:11] -rw-r--r-- 2 boinc boinc 612546211 Jun 22 20:01 ATLAS.root_0
[2024-06-23 01:41:11] -rw-r--r-- 2 boinc boinc     17537 Jun 22 20:01 start_atlas.sh
[2024-06-23 01:41:11] -rw-r--r-- 2 boinc boinc    482476 Jun 22 20:01 input.tar.gz
[2024-06-23 01:41:11] -rw------- 1 boinc boinc 278346534 Jun 23 01:39 HITS.pool.root.1
[2024-06-23 01:41:11] -rw------- 1 boinc boinc   2621440 Jun 23 01:41 result.tar.gz
01:41:12 (582205): run_atlas exited; CPU time 76073.851295
01:41:12 (582205): called boinc_finish(0)

</stderr_txt>
]]>

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