Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:25 (3080171): wrapper (7.7.26015): starting
05:47:25 (3080171): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 05:47:25] Arguments: --nthreads 4
[2024-06-27 05:47:25] Threads: 4
[2024-06-27 05:47:25] Checking for CVMFS
[2024-06-27 05:47:25] No cvmfs_config command found, will try listing directly
[2024-06-27 05:47:25] CVMFS is ok
[2024-06-27 05:47:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 05:47:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 05:47:25] Further information can be found at the LHC@home message board.
[2024-06-27 05:47:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 05:47:25] Checking for apptainer binary...
[2024-06-27 05:47:25] which: no apptainer in ((null))
[2024-06-27 05:47:25] apptainer is not installed, using version from CVMFS
[2024-06-27 05:47:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 05:47:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-06-27 05:47:26] apptainer works
[2024-06-27 05:47:26] Set ATHENA_PROC_NUMBER=4
[2024-06-27 05:47:26] Set ATHENA_CORE_NUMBER=4
[2024-06-27 05:47:26] Starting ATLAS job with PandaID=6238817206
[2024-06-27 05:47:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 08:56:34]  *** The last 200 lines of the pilot log: ***
[2024-06-27 08:56:34] 2024-06-27 06:56:19,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 08:56:34] 2024-06-27 06:56:19,469 | INFO     | fitting pss+swap vs Time
[2024-06-27 08:56:34] 2024-06-27 06:56:19,469 | INFO     | model: linear, x: [1719460078.0, 1719460139.0, 1719460200.0, 1719460261.0, 1719460322.0, 1719460383.0, 1719460444.0, 1719460505.0, 1719460566.0, 1719460627.0, 1719
[2024-06-27 08:56:34] 2024-06-27 06:56:19,469 | INFO     | sum of square deviations: 1995283922.5
[2024-06-27 08:56:34] 2024-06-27 06:56:19,470 | INFO     | sum of deviations: 43786987426.00001
[2024-06-27 08:56:34] 2024-06-27 06:56:19,470 | INFO     | mean x: 1719465720.5
[2024-06-27 08:56:34] 2024-06-27 06:56:19,470 | INFO     | mean y: 2325061.2473118277
[2024-06-27 08:56:34] 2024-06-27 06:56:19,470 | INFO     | -- intersect: -37731765327.57129
[2024-06-27 08:56:34] 2024-06-27 06:56:19,470 | INFO     | intersect: -37731765327.57129
[2024-06-27 08:56:34] 2024-06-27 06:56:19,470 | INFO     | chi2: 4.343819298691264
[2024-06-27 08:56:34] 2024-06-27 06:56:19,471 | INFO     | model: linear, x: [1719460078.0, 1719460139.0, 1719460200.0, 1719460261.0, 1719460322.0, 1719460383.0, 1719460444.0, 1719460505.0, 1719460566.0, 1719460627.0, 1719
[2024-06-27 08:56:34] 2024-06-27 06:56:19,471 | INFO     | sum of square deviations: 1838657730.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,471 | INFO     | sum of deviations: 54272781346.999985
[2024-06-27 08:56:34] 2024-06-27 06:56:19,471 | INFO     | mean x: 1719465568.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,471 | INFO     | mean y: 2335017.8121546963
[2024-06-27 08:56:34] 2024-06-27 06:56:19,472 | INFO     | -- intersect: -50752178605.427086
[2024-06-27 08:56:34] 2024-06-27 06:56:19,472 | INFO     | intersect: -50752178605.427086
[2024-06-27 08:56:34] 2024-06-27 06:56:19,472 | INFO     | chi2: 3.5754834797581503
[2024-06-27 08:56:34] 2024-06-27 06:56:19,472 | INFO     | current chi2=3.5754834797581503 (change=17.68802443427154 %)
[2024-06-27 08:56:34] 2024-06-27 06:56:19,472 | INFO     | right removable region: 180
[2024-06-27 08:56:34] 2024-06-27 06:56:19,472 | INFO     | model: linear, x: [1719460383.0, 1719460444.0, 1719460505.0, 1719460566.0, 1719460627.0, 1719460688.0, 1719460749.0, 1719460810.0, 1719460871.0, 1719460932.0, 1719
[2024-06-27 08:56:34] 2024-06-27 06:56:19,472 | INFO     | sum of square deviations: 1838657730.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,473 | INFO     | sum of deviations: 3473086301.000002
[2024-06-27 08:56:34] 2024-06-27 06:56:19,473 | INFO     | mean x: 1719465873.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,473 | INFO     | mean y: 2364154.099447514
[2024-06-27 08:56:34] 2024-06-27 06:56:19,473 | INFO     | -- intersect: -3245577684.7295275
[2024-06-27 08:56:34] 2024-06-27 06:56:19,473 | INFO     | intersect: -3245577684.7295275
[2024-06-27 08:56:34] 2024-06-27 06:56:19,473 | INFO     | chi2: 2.098844922078583
[2024-06-27 08:56:34] 2024-06-27 06:56:19,473 | INFO     | current chi2=2.098844922078583 (change=51.68203882903376 %)
[2024-06-27 08:56:34] 2024-06-27 06:56:19,474 | INFO     | model: linear, x: [1719460688.0, 1719460749.0, 1719460810.0, 1719460871.0, 1719460932.0, 1719460993.0, 1719461054.0, 1719461115.0, 1719461176.0, 1719461237.0, 1719
[2024-06-27 08:56:34] 2024-06-27 06:56:19,474 | INFO     | sum of square deviations: 1690450300.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,474 | INFO     | sum of deviations: -26292224483.5
[2024-06-27 08:56:34] 2024-06-27 06:56:19,474 | INFO     | mean x: 1719466025.5
[2024-06-27 08:56:34] 2024-06-27 06:56:19,474 | INFO     | mean y: 2394784.710227273
[2024-06-27 08:56:34] 2024-06-27 06:56:19,475 | INFO     | -- intersect: 26745912020.441757
[2024-06-27 08:56:34] 2024-06-27 06:56:19,475 | INFO     | intersect: 26745912020.441757
[2024-06-27 08:56:34] 2024-06-27 06:56:19,475 | INFO     | chi2: 0.977246547333348
[2024-06-27 08:56:34] 2024-06-27 06:56:19,475 | INFO     | current chi2=0.977246547333348 (change=53.43883976117989 %)
[2024-06-27 08:56:34] 2024-06-27 06:56:19,475 | INFO     | model: linear, x: [1719460993.0, 1719461054.0, 1719461115.0, 1719461176.0, 1719461237.0, 1719461298.0, 1719461359.0, 1719461420.0, 1719461481.0, 1719461542.0, 1719
[2024-06-27 08:56:34] 2024-06-27 06:56:19,475 | INFO     | sum of square deviations: 1550429070.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | sum of deviations: -25852802352.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | mean x: 1719466178.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | mean y: 2394221.1461988306
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | -- intersect: 28673824672.83584
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | intersect: 28673824672.83584
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | chi2: 0.945148347914988
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | current chi2=0.945148347914988 (change=3.284554906430486 %)
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | left removable region: 30
[2024-06-27 08:56:34] 2024-06-27 06:56:19,476 | INFO     | model: linear, x: [1719461908.0, 1719461969.0, 1719462030.0, 1719462091.0, 1719462152.0, 1719462213.0, 1719462274.0, 1719462335.0, 1719462396.0, 1719462457.0, 1719
[2024-06-27 08:56:34] 2024-06-27 06:56:19,477 | INFO     | sum of square deviations: 1046484737.5
[2024-06-27 08:56:34] 2024-06-27 06:56:19,477 | INFO     | sum of deviations: 3183991197.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,477 | INFO     | mean x: 1719466452.5
[2024-06-27 08:56:34] 2024-06-27 06:56:19,477 | INFO     | mean y: 2383950.0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,477 | INFO     | -- intersect: -5229193589.655058
[2024-06-27 08:56:34] 2024-06-27 06:56:19,477 | INFO     | intersect: -5229193589.655058
[2024-06-27 08:56:34] 2024-06-27 06:56:19,477 | INFO     | chi2: 0.0004080441011190663
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | -- intersect: -5229193589.655058
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | current memory leak: 3.04 B/s (using 150 data points, chi2=0.00)
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | ..............................
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | . Timing measurements:
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | . get job = 0 s
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | . initial setup = 1 s
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | . payload setup = 4 s
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | . stage-in = 0 s
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | . payload execution = 11291 s
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | . stage-out = 0 s
[2024-06-27 08:56:34] 2024-06-27 06:56:19,478 | INFO     | . log creation = 0 s
[2024-06-27 08:56:34] 2024-06-27 06:56:19,479 | INFO     | ..............................
[2024-06-27 08:56:34] 2024-06-27 06:56:19,537 | INFO     | 
[2024-06-27 08:56:34] 2024-06-27 06:56:19,537 | INFO     | job summary report
[2024-06-27 08:56:34] 2024-06-27 06:56:19,537 | INFO     | --------------------------------------------------
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | PanDA job id: 6238817206
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | task id: 40024040
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | errors: (none)
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | pilot state: finished 
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | transexitcode: 0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | exeerrorcode: 0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | exeerrordiag: 
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | exitcode: 0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | exitmsg: OK
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | cpuconsumptiontime: 42035 s
[2024-06-27 08:56:34] 2024-06-27 06:56:19,538 | INFO     | nevents: 400
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | neventsw: 0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | pid: 3091197
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | pgrp: 3091197
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | corecount: 4
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | event service: False
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | sizes: {0: 2386813, 4: 2387019, 11: 2387047, 11300: 2416288, 11301: 2425268, 11304: 2425324, 11310: 2425622}
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | --------------------------------------------------
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | 
[2024-06-27 08:56:34] 2024-06-27 06:56:19,539 | INFO     | executing command: ls -lF /scratch/boinc/var/slot8/slots/0
[2024-06-27 08:56:34] 2024-06-27 06:56:19,548 | WARNING  | process 3091197 is no longer using CPU - aborting
[2024-06-27 08:56:34] 2024-06-27 06:56:19,548 | INFO     | aborting job monitoring since job object (job id=6238817206) has expired
[2024-06-27 08:56:34] 2024-06-27 06:56:19,571 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,571 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,571 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,571 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,573 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 08:56:34] 2024-06-27 06:56:19,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,573 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 08:56:34] 2024-06-27 06:56:19,573 | INFO     | job 6238817206 has completed (purged errors)
[2024-06-27 08:56:34] 2024-06-27 06:56:19,573 | INFO     | overall cleanup function is called
[2024-06-27 08:56:34] 2024-06-27 06:56:20,580 | INFO     | --- collectZombieJob: --- 10, [3091197]
[2024-06-27 08:56:34] 2024-06-27 06:56:20,580 | INFO     | zombie collector waiting for pid 3091197
[2024-06-27 08:56:34] 2024-06-27 06:56:20,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 08:56:34] 2024-06-27 06:56:21,582 | INFO     | collected zombie processes
[2024-06-27 08:56:34] 2024-06-27 06:56:21,583 | INFO     | will now attempt to kill all subprocesses of pid=3091197
[2024-06-27 08:56:34] 2024-06-27 06:56:21,677 | INFO     | process IDs to be killed: [3091197] (in reverse order)
[2024-06-27 08:56:34] 2024-06-27 06:56:21,744 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 08:56:34] 2024-06-27 06:56:21,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 08:56:34] 2024-06-27 06:56:21,749 | INFO     | did not find any defunct processes belonging to 3091197
[2024-06-27 08:56:34] 2024-06-27 06:56:21,753 | INFO     | did not find any defunct processes belonging to 3091197
[2024-06-27 08:56:34] 2024-06-27 06:56:21,753 | INFO     | ready for new job
[2024-06-27 08:56:34] 2024-06-27 06:56:21,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 08:56:34] 2024-06-27 06:56:21,755 | INFO     | *************************************
[2024-06-27 08:56:34] 2024-06-27 06:56:21,756 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 08:56:34] 2024-06-27 06:56:21,756 | INFO     | *************************************
[2024-06-27 08:56:34] 2024-06-27 06:56:21,756 | INFO     | 
[2024-06-27 08:56:34] 2024-06-27 06:56:21,758 | INFO     | architecture information:
[2024-06-27 08:56:34] 2024-06-27 06:56:21,759 | INFO     | executing command: cat /etc/os-release
[2024-06-27 08:56:34] 2024-06-27 06:56:21,771 | INFO     | cat /etc/os-release:
[2024-06-27 08:56:34] NAME="CentOS Linux"
[2024-06-27 08:56:34] VERSION="7 (Core)"
[2024-06-27 08:56:34] ID="centos"
[2024-06-27 08:56:34] ID_LIKE="rhel fedora"
[2024-06-27 08:56:34] VERSION_ID="7"
[2024-06-27 08:56:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 08:56:34] ANSI_COLOR="0;31"
[2024-06-27 08:56:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 08:56:34] HOME_URL="https://www.centos.org/"
[2024-06-27 08:56:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 08:56:34] 
[2024-06-27 08:56:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 08:56:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 08:56:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 08:56:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 08:56:34] 
[2024-06-27 08:56:34] 2024-06-27 06:56:21,772 | INFO     | *************************************
[2024-06-27 08:56:34] 2024-06-27 06:56:22,275 | INFO     | executing command: df -mP /scratch/boinc/var/slot8/slots/0
[2024-06-27 08:56:34] 2024-06-27 06:56:22,296 | INFO     | sufficient remaining disk space (1703249182720 B)
[2024-06-27 08:56:34] 2024-06-27 06:56:22,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 08:56:34] 2024-06-27 06:56:22,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 08:56:34] 2024-06-27 06:56:22,375 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 08:56:34] 2024-06-27 06:56:22,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 08:56:34] 2024-06-27 06:56:22,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 08:56:34] 2024-06-27 06:56:23,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 08:56:34] 2024-06-27 06:56:23,061 | INFO     | aborting loop
[2024-06-27 08:56:34] 2024-06-27 06:56:23,061 | INFO     | all data control threads have been joined
[2024-06-27 08:56:34] 2024-06-27 06:56:23,263 | INFO     | all payload control threads have been joined
[2024-06-27 08:56:34] 2024-06-27 06:56:23,302 | INFO     | [job] retrieve thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:23,392 | INFO     | [payload] validate_post thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:23,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 08:56:34] 2024-06-27 06:56:23,620 | INFO     | [job] validate thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:23,666 | INFO     | all job control threads have been joined
[2024-06-27 08:56:34] 2024-06-27 06:56:23,771 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:23,901 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:23,989 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:24,066 | INFO     | [job] job monitor thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:24,066 | INFO     | [data] control thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:24,269 | INFO     | [payload] control thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:24,336 | INFO     | [payload] failed_post thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:24,432 | INFO     | [data] copytool_in thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:24,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 08:56:34] 2024-06-27 06:56:24,543 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:24,548 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 08:56:34] 2024-06-27 06:56:24,672 | INFO     | [job] control thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:25,553 | INFO     | [job] queue monitor thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:25,621 | INFO     | [data] copytool_out thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:28,511 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 08:56:34] 2024-06-27 06:56:28,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47682041300032)>', '<ExcThread(monitor, started 47682221573888)>']
[2024-06-27 08:56:34] 2024-06-27 06:56:29,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 08:56:34] 2024-06-27 06:56:29,411 | INFO     | [monitor] control thread has ended
[2024-06-27 08:56:34] 2024-06-27 06:56:33,572 | INFO     | all workflow threads have been joined
[2024-06-27 08:56:34] 2024-06-27 06:56:33,573 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 08:56:34] 2024-06-27 06:56:33,573 | INFO     | traces error code: 0
[2024-06-27 08:56:34] 2024-06-27 06:56:33,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 08:56:34] 2024-06-27 06:56:33,631 [wrapper] ==== pilot stdout END ====
[2024-06-27 08:56:34] 2024-06-27 06:56:33,634 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 08:56:34] 2024-06-27 06:56:33,637 [wrapper] pilotpid: 3084396
[2024-06-27 08:56:34] 2024-06-27 06:56:33,641 [wrapper] Pilot exit status: 0
[2024-06-27 08:56:34] 2024-06-27 06:56:33,651 [wrapper] pandaids: 6238817206
[2024-06-27 08:56:34] 2024-06-27 06:56:33,696 [wrapper] cleanup supervisor_pilot 3246197 3084397
[2024-06-27 08:56:34] 2024-06-27 06:56:33,699 [wrapper] Test setup, not cleaning
[2024-06-27 08:56:34] 2024-06-27 06:56:33,702 [wrapper] ==== wrapper stdout END ====
[2024-06-27 08:56:34] 2024-06-27 06:56:33,704 [wrapper] ==== wrapper stderr END ====
[2024-06-27 08:56:34] 2024-06-27 06:56:33,710 [wrapper] apfmon messages muted
[2024-06-27 08:56:34]  *** Error codes and diagnostics ***
[2024-06-27 08:56:34]     "exeErrorCode": 0,
[2024-06-27 08:56:34]     "exeErrorDiag": "",
[2024-06-27 08:56:34]     "pilotErrorCode": 0,
[2024-06-27 08:56:34]     "pilotErrorDiag": "",
[2024-06-27 08:56:34]  *** Listing of results directory ***
[2024-06-27 08:56:34] total 875004
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:24 pilot3.tar.gz
[2024-06-27 08:56:34] -rwx------ 1 boinc boinc     32308 Jun 20 10:41 runpilot2-wrapper.sh
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc      5654 Jun 20 10:41 queuedata.json
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc       100 Jun 27 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 08:56:34] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 05:47 run_atlas
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc       105 Jun 27 05:47 job.xml
[2024-06-27 08:56:34] -rw-r--r-- 2 boinc boinc 616300594 Jun 27 05:47 EVNT.40024038._000005.pool.root.1
[2024-06-27 08:56:34] -rw-r--r-- 2 boinc boinc     17537 Jun 27 05:47 start_atlas.sh
[2024-06-27 08:56:34] drwxrwx--x 2 boinc boinc      4096 Jun 27 05:47 shared
[2024-06-27 08:56:34] -rw-r--r-- 2 boinc boinc    482472 Jun 27 05:47 input.tar.gz
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc      6454 Jun 27 05:47 init_data.xml
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc         0 Jun 27 05:47 boinc_lockfile
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc      2479 Jun 27 05:47 pandaJob.out
[2024-06-27 08:56:34] -rw------- 1 boinc boinc       424 Jun 27 05:47 setup.sh.local
[2024-06-27 08:56:34] -rw------- 1 boinc boinc   1036279 Jun 27 05:47 agis_schedconf.cvmfs.json
[2024-06-27 08:56:34] -rw------- 1 boinc boinc   1321363 Jun 27 05:47 cric_ddmendpoints.json
[2024-06-27 08:56:34] drwx------ 4 boinc boinc      4096 Jun 27 05:47 pilot3
[2024-06-27 08:56:34] -rw------- 1 boinc boinc 273247020 Jun 27 08:55 HITS.40024040._000209.pool.root.1
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc       531 Jun 27 08:55 boinc_task_state.xml
[2024-06-27 08:56:34] -rw------- 1 boinc boinc        95 Jun 27 08:56 pilot_heartbeat.json
[2024-06-27 08:56:34] -rw------- 1 boinc boinc      1037 Jun 27 08:56 memory_monitor_summary.json
[2024-06-27 08:56:34] -rw------- 1 boinc boinc         0 Jun 27 08:56 agis_ddmendpoints.agis.ALL.json
[2024-06-27 08:56:34] -rw------- 1 boinc boinc    306317 Jun 27 08:56 log.40024040._000209.job.log.tgz.1
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc      8192 Jun 27 08:56 boinc_mmap_file
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc        28 Jun 27 08:56 wrapper_checkpoint.txt
[2024-06-27 08:56:34] -rw------- 1 boinc boinc      7749 Jun 27 08:56 heartbeat.json
[2024-06-27 08:56:34] -rw------- 1 boinc boinc      4221 Jun 27 08:56 pilotlog.txt
[2024-06-27 08:56:34] -rw------- 1 boinc boinc   1148336 Jun 27 08:56 log.40024040._000209.job.log.1
[2024-06-27 08:56:34] -rw------- 1 boinc boinc       357 Jun 27 08:56 output.list
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc       620 Jun 27 08:56 runtime_log
[2024-06-27 08:56:34] -rw------- 1 boinc boinc   1474560 Jun 27 08:56 result.tar.gz
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc     11391 Jun 27 08:56 runtime_log.err
[2024-06-27 08:56:34] -rw------- 1 boinc boinc       657 Jun 27 08:56 mhyNDmoXSe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm20kKDmvIo3om.diag
[2024-06-27 08:56:34] -rw-r--r-- 1 boinc boinc     21297 Jun 27 08:56 stderr.txt
[2024-06-27 08:56:34] HITS file was successfully produced:
[2024-06-27 08:56:34] -rw------- 1 boinc boinc 273247020 Jun 27 08:55 shared/HITS.pool.root.1
[2024-06-27 08:56:34]  *** Contents of shared directory: ***
[2024-06-27 08:56:34] total 870644
[2024-06-27 08:56:34] -rw-r--r-- 2 boinc boinc 616300594 Jun 27 05:47 ATLAS.root_0
[2024-06-27 08:56:34] -rw-r--r-- 2 boinc boinc     17537 Jun 27 05:47 start_atlas.sh
[2024-06-27 08:56:34] -rw-r--r-- 2 boinc boinc    482472 Jun 27 05:47 input.tar.gz
[2024-06-27 08:56:34] -rw------- 1 boinc boinc 273247020 Jun 27 08:55 HITS.pool.root.1
[2024-06-27 08:56:34] -rw------- 1 boinc boinc   1474560 Jun 27 08:56 result.tar.gz
08:56:36 (3080171): run_atlas exited; CPU time 41934.468010
08:56:36 (3080171): called boinc_finish(0)

</stderr_txt>
]]>

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