Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:08:40 (4022241): wrapper (7.7.26015): starting
07:08:40 (4022241): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 07:08:40] Arguments: --nthreads 4
[2024-06-22 07:08:40] Threads: 4
[2024-06-22 07:08:40] Checking for CVMFS
[2024-06-22 07:08:40] No cvmfs_config command found, will try listing directly
[2024-06-22 07:08:40] CVMFS is ok
[2024-06-22 07:08:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 07:08:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 07:08:40] Further information can be found at the LHC@home message board.
[2024-06-22 07:08:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 07:08:40] Checking for apptainer binary...
[2024-06-22 07:08:40] which: no apptainer in ((null))
[2024-06-22 07:08:40] apptainer is not installed, using version from CVMFS
[2024-06-22 07:08:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 07:08:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-06-22 07:08:42] apptainer works
[2024-06-22 07:08:42] Set ATHENA_PROC_NUMBER=4
[2024-06-22 07:08:42] Set ATHENA_CORE_NUMBER=4
[2024-06-22 07:08:42] Starting ATLAS job with PandaID=6238811742
[2024-06-22 07:08:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 15:01:33]  *** The last 200 lines of the pilot log: ***
[2024-06-22 15:01:33] 2024-06-22 13:01:16,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 15:01:33] 2024-06-22 13:01:16,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 15:01:33] 2024-06-22 13:01:16,072 | INFO     | fitting pss+swap vs Time
[2024-06-22 15:01:33] 2024-06-22 13:01:16,072 | INFO     | model: linear, x: [1719033012.0, 1719033073.0, 1719033134.0, 1719033195.0, 1719033256.0, 1719033317.0, 1719033378.0, 1719033439.0, 1719033500.0, 1719033561.0, 1719
[2024-06-22 15:01:33] 2024-06-22 13:01:16,073 | INFO     | sum of square deviations: 30776510072.0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,079 | INFO     | sum of deviations: 198055751783.00003
[2024-06-22 15:01:33] 2024-06-22 13:01:16,079 | INFO     | mean x: 1719047103.0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,079 | INFO     | mean y: 2352861.043196544
[2024-06-22 15:01:33] 2024-06-22 13:01:16,079 | INFO     | -- intersect: -11060212892.466496
[2024-06-22 15:01:33] 2024-06-22 13:01:16,079 | INFO     | intersect: -11060212892.466496
[2024-06-22 15:01:33] 2024-06-22 13:01:16,080 | INFO     | chi2: 4.732437580704828
[2024-06-22 15:01:33] 2024-06-22 13:01:16,081 | INFO     | model: linear, x: [1719033012.0, 1719033073.0, 1719033134.0, 1719033195.0, 1719033256.0, 1719033317.0, 1719033378.0, 1719033439.0, 1719033500.0, 1719033561.0, 1719
[2024-06-22 15:01:33] 2024-06-22 13:01:16,081 | INFO     | sum of square deviations: 29790156694.5
[2024-06-22 15:01:33] 2024-06-22 13:01:16,087 | INFO     | sum of deviations: 227049308501.5
[2024-06-22 15:01:33] 2024-06-22 13:01:16,087 | INFO     | mean x: 1719046950.5
[2024-06-22 15:01:33] 2024-06-22 13:01:16,087 | INFO     | mean y: 2357301.69650655
[2024-06-22 15:01:33] 2024-06-22 13:01:16,087 | INFO     | -- intersect: -13099568458.388464
[2024-06-22 15:01:33] 2024-06-22 13:01:16,088 | INFO     | intersect: -13099568458.388464
[2024-06-22 15:01:33] 2024-06-22 13:01:16,088 | INFO     | chi2: 3.874480038310081
[2024-06-22 15:01:33] 2024-06-22 13:01:16,088 | INFO     | current chi2=3.874480038310081 (change=18.129294423086016 %)
[2024-06-22 15:01:33] 2024-06-22 13:01:16,089 | INFO     | right removable region: 457
[2024-06-22 15:01:33] 2024-06-22 13:01:16,089 | INFO     | model: linear, x: [1719033317.0, 1719033378.0, 1719033439.0, 1719033500.0, 1719033561.0, 1719033622.0, 1719033683.0, 1719033744.0, 1719033805.0, 1719033866.0, 1719
[2024-06-22 15:01:33] 2024-06-22 13:01:16,090 | INFO     | sum of square deviations: 29790156694.5
[2024-06-22 15:01:33] 2024-06-22 13:01:16,095 | INFO     | sum of deviations: 90866419992.5
[2024-06-22 15:01:33] 2024-06-22 13:01:16,100 | INFO     | mean x: 1719047255.5
[2024-06-22 15:01:33] 2024-06-22 13:01:16,100 | INFO     | mean y: 2369407.0327510918
[2024-06-22 15:01:33] 2024-06-22 13:01:16,100 | INFO     | -- intersect: -5241096463.492747
[2024-06-22 15:01:33] 2024-06-22 13:01:16,100 | INFO     | intersect: -5241096463.492747
[2024-06-22 15:01:33] 2024-06-22 13:01:16,101 | INFO     | chi2: 2.4132554141746096
[2024-06-22 15:01:33] 2024-06-22 13:01:16,101 | INFO     | current chi2=2.4132554141746096 (change=49.00608041796527 %)
[2024-06-22 15:01:33] 2024-06-22 13:01:16,102 | INFO     | model: linear, x: [1719033622.0, 1719033683.0, 1719033744.0, 1719033805.0, 1719033866.0, 1719033927.0, 1719033988.0, 1719034049.0, 1719034110.0, 1719034171.0, 1719
[2024-06-22 15:01:33] 2024-06-22 13:01:16,102 | INFO     | sum of square deviations: 28825106042.0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,108 | INFO     | sum of deviations: 3669746092.0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,108 | INFO     | mean x: 1719047408.0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,112 | INFO     | mean y: 2383193.4746136866
[2024-06-22 15:01:33] 2024-06-22 13:01:16,112 | INFO     | -- intersect: -216470034.62032872
[2024-06-22 15:01:33] 2024-06-22 13:01:16,112 | INFO     | intersect: -216470034.62032872
[2024-06-22 15:01:33] 2024-06-22 13:01:16,113 | INFO     | chi2: 1.0109449454338097
[2024-06-22 15:01:33] 2024-06-22 13:01:16,113 | INFO     | current chi2=1.0109449454338097 (change=58.108663529940664 %)
[2024-06-22 15:01:33] 2024-06-22 13:01:16,114 | INFO     | model: linear, x: [1719033927.0, 1719033988.0, 1719034049.0, 1719034110.0, 1719034171.0, 1719034232.0, 1719034293.0, 1719034354.0, 1719034415.0, 1719034476.0, 1719
[2024-06-22 15:01:33] 2024-06-22 13:01:16,114 | INFO     | sum of square deviations: 27881125552.0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,120 | INFO     | sum of deviations: -19043306807.5
[2024-06-22 15:01:33] 2024-06-22 13:01:16,120 | INFO     | mean x: 1719047560.5
[2024-06-22 15:01:33] 2024-06-22 13:01:16,120 | INFO     | mean y: 2386850.448660714
[2024-06-22 15:01:33] 2024-06-22 13:01:16,120 | INFO     | -- intersect: 1176527042.5377722
[2024-06-22 15:01:33] 2024-06-22 13:01:16,121 | INFO     | intersect: 1176527042.5377722
[2024-06-22 15:01:33] 2024-06-22 13:01:16,121 | INFO     | chi2: 0.8835182079613797
[2024-06-22 15:01:33] 2024-06-22 13:01:16,121 | INFO     | current chi2=0.8835182079613797 (change=12.604715820380264 %)
[2024-06-22 15:01:33] 2024-06-22 13:01:16,122 | INFO     | left removable region: 30
[2024-06-22 15:01:33] 2024-06-22 13:01:16,122 | INFO     | model: linear, x: [1719034842.0, 1719034903.0, 1719034964.0, 1719035025.0, 1719035086.0, 1719035147.0, 1719035208.0, 1719035269.0, 1719035330.0, 1719035391.0, 1719
[2024-06-22 15:01:33] 2024-06-22 13:01:16,123 | INFO     | sum of square deviations: 24141245198.0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,128 | INFO     | sum of deviations: 7949807858.999999
[2024-06-22 15:01:33] 2024-06-22 13:01:16,128 | INFO     | mean x: 1719047835.0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,128 | INFO     | mean y: 2392405.0585480095
[2024-06-22 15:01:33] 2024-06-22 13:01:16,128 | INFO     | -- intersect: -563696869.814983
[2024-06-22 15:01:33] 2024-06-22 13:01:16,128 | INFO     | intersect: -563696869.814983
[2024-06-22 15:01:33] 2024-06-22 13:01:16,129 | INFO     | chi2: 0.002062671025525781
[2024-06-22 15:01:33] 2024-06-22 13:01:16,129 | INFO     | -- intersect: -563696869.814983
[2024-06-22 15:01:33] 2024-06-22 13:01:16,129 | INFO     | current memory leak: 0.33 B/s (using 427 data points, chi2=0.00)
[2024-06-22 15:01:33] 2024-06-22 13:01:16,130 | INFO     | ..............................
[2024-06-22 15:01:33] 2024-06-22 13:01:16,130 | INFO     | . Timing measurements:
[2024-06-22 15:01:33] 2024-06-22 13:01:16,131 | INFO     | . get job = 0 s
[2024-06-22 15:01:33] 2024-06-22 13:01:16,131 | INFO     | . initial setup = 1 s
[2024-06-22 15:01:33] 2024-06-22 13:01:16,131 | INFO     | . payload setup = 16 s
[2024-06-22 15:01:33] 2024-06-22 13:01:16,131 | INFO     | . stage-in = 0 s
[2024-06-22 15:01:33] 2024-06-22 13:01:16,131 | INFO     | . payload execution = 28239 s
[2024-06-22 15:01:33] 2024-06-22 13:01:16,131 | INFO     | . stage-out = 1 s
[2024-06-22 15:01:33] 2024-06-22 13:01:16,131 | INFO     | . log creation = 0 s
[2024-06-22 15:01:33] 2024-06-22 13:01:16,131 | INFO     | ..............................
[2024-06-22 15:01:33] 2024-06-22 13:01:16,600 | INFO     | 
[2024-06-22 15:01:33] 2024-06-22 13:01:16,600 | INFO     | job summary report
[2024-06-22 15:01:33] 2024-06-22 13:01:16,600 | INFO     | --------------------------------------------------
[2024-06-22 15:01:33] 2024-06-22 13:01:16,601 | INFO     | PanDA job id: 6238811742
[2024-06-22 15:01:33] 2024-06-22 13:01:16,601 | INFO     | task id: 38920982
[2024-06-22 15:01:33] 2024-06-22 13:01:16,601 | INFO     | errors: (none)
[2024-06-22 15:01:33] 2024-06-22 13:01:16,601 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 15:01:33] 2024-06-22 13:01:16,601 | INFO     | pilot state: finished 
[2024-06-22 15:01:33] 2024-06-22 13:01:16,601 | INFO     | transexitcode: 0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,601 | INFO     | exeerrorcode: 0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,601 | INFO     | exeerrordiag: 
[2024-06-22 15:01:33] 2024-06-22 13:01:16,602 | INFO     | exitcode: 0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,602 | INFO     | exitmsg: OK
[2024-06-22 15:01:33] 2024-06-22 13:01:16,602 | INFO     | cpuconsumptiontime: 107548 s
[2024-06-22 15:01:33] 2024-06-22 13:01:16,602 | INFO     | nevents: 400
[2024-06-22 15:01:33] 2024-06-22 13:01:16,602 | INFO     | neventsw: 0
[2024-06-22 15:01:33] 2024-06-22 13:01:16,602 | INFO     | pid: 4033616
[2024-06-22 15:01:33] 2024-06-22 13:01:16,602 | INFO     | pgrp: 4033616
[2024-06-22 15:01:33] 2024-06-22 13:01:16,603 | INFO     | corecount: 4
[2024-06-22 15:01:33] 2024-06-22 13:01:16,603 | INFO     | event service: False
[2024-06-22 15:01:33] 2024-06-22 13:01:16,603 | INFO     | sizes: {0: 2387093, 1: 2387093, 11: 2387121, 12: 2387355, 22: 2387383, 28259: 2424463, 28261: 2433501, 28294: 2433615}
[2024-06-22 15:01:33] 2024-06-22 13:01:16,603 | INFO     | --------------------------------------------------
[2024-06-22 15:01:33] 2024-06-22 13:01:16,603 | INFO     | 
[2024-06-22 15:01:33] 2024-06-22 13:01:16,603 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-22 15:01:33] 2024-06-22 13:01:16,627 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,627 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,627 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,627 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,629 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 15:01:33] 2024-06-22 13:01:16,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,629 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 15:01:33] 2024-06-22 13:01:16,629 | INFO     | job 6238811742 has completed (purged errors)
[2024-06-22 15:01:33] 2024-06-22 13:01:16,629 | INFO     | overall cleanup function is called
[2024-06-22 15:01:33] 2024-06-22 13:01:17,636 | INFO     | --- collectZombieJob: --- 10, [4033616]
[2024-06-22 15:01:33] 2024-06-22 13:01:17,636 | INFO     | zombie collector waiting for pid 4033616
[2024-06-22 15:01:33] 2024-06-22 13:01:17,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 15:01:33] 2024-06-22 13:01:18,641 | INFO     | collected zombie processes
[2024-06-22 15:01:33] 2024-06-22 13:01:18,641 | INFO     | will now attempt to kill all subprocesses of pid=4033616
[2024-06-22 15:01:33] 2024-06-22 13:01:18,791 | INFO     | process IDs to be killed: [4033616] (in reverse order)
[2024-06-22 15:01:33] 2024-06-22 13:01:18,939 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 15:01:33] 2024-06-22 13:01:18,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 15:01:33] 2024-06-22 13:01:18,946 | INFO     | did not find any defunct processes belonging to 4033616
[2024-06-22 15:01:33] 2024-06-22 13:01:18,952 | INFO     | did not find any defunct processes belonging to 4033616
[2024-06-22 15:01:33] 2024-06-22 13:01:18,952 | INFO     | ready for new job
[2024-06-22 15:01:33] 2024-06-22 13:01:18,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 15:01:33] 2024-06-22 13:01:18,954 | INFO     | *************************************
[2024-06-22 15:01:33] 2024-06-22 13:01:18,955 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 15:01:33] 2024-06-22 13:01:18,955 | INFO     | *************************************
[2024-06-22 15:01:33] 2024-06-22 13:01:18,955 | INFO     | 
[2024-06-22 15:01:33] 2024-06-22 13:01:18,957 | INFO     | architecture information:
[2024-06-22 15:01:33] 2024-06-22 13:01:18,957 | INFO     | executing command: cat /etc/os-release
[2024-06-22 15:01:33] 2024-06-22 13:01:18,978 | INFO     | cat /etc/os-release:
[2024-06-22 15:01:33] NAME="CentOS Linux"
[2024-06-22 15:01:33] VERSION="7 (Core)"
[2024-06-22 15:01:33] ID="centos"
[2024-06-22 15:01:33] ID_LIKE="rhel fedora"
[2024-06-22 15:01:33] VERSION_ID="7"
[2024-06-22 15:01:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 15:01:33] ANSI_COLOR="0;31"
[2024-06-22 15:01:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 15:01:33] HOME_URL="https://www.centos.org/"
[2024-06-22 15:01:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 15:01:33] 
[2024-06-22 15:01:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 15:01:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 15:01:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 15:01:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 15:01:33] 
[2024-06-22 15:01:33] 2024-06-22 13:01:18,978 | INFO     | *************************************
[2024-06-22 15:01:33] 2024-06-22 13:01:19,481 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-22 15:01:33] 2024-06-22 13:01:19,502 | INFO     | sufficient remaining disk space (1666897149952 B)
[2024-06-22 15:01:33] 2024-06-22 13:01:19,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 15:01:33] 2024-06-22 13:01:19,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 15:01:33] 2024-06-22 13:01:19,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 15:01:33] 2024-06-22 13:01:19,503 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 15:01:33] 2024-06-22 13:01:19,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 15:01:33] 2024-06-22 13:01:19,503 | INFO     | aborting loop
[2024-06-22 15:01:33] 2024-06-22 13:01:19,504 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 15:01:33] 2024-06-22 13:01:19,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 15:01:33] 2024-06-22 13:01:19,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 15:01:33] 2024-06-22 13:01:20,267 | INFO     | all payload control threads have been joined
[2024-06-22 15:01:33] 2024-06-22 13:01:20,316 | INFO     | all data control threads have been joined
[2024-06-22 15:01:33] 2024-06-22 13:01:20,507 | INFO     | [job] retrieve thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:20,509 | INFO     | [job] job monitor thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:20,585 | INFO     | [job] validate thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:20,618 | INFO     | all job control threads have been joined
[2024-06-22 15:01:33] 2024-06-22 13:01:20,695 | INFO     | [data] copytool_in thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:20,806 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,081 | INFO     | [payload] validate_post thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,113 | INFO     | [payload] failed_post thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 15:01:33] 2024-06-22 13:01:21,272 | INFO     | [payload] control thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,321 | INFO     | [data] control thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,509 | INFO     | [data] copytool_out thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,537 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,623 | INFO     | [job] control thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,720 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,728 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:21,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 15:01:33] 2024-06-22 13:01:22,258 | INFO     | [job] queue monitor thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:25,755 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 15:01:33] 2024-06-22 13:01:27,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47384243696704)>', '<ExcThread(monitor, started 47384834873088)>']
[2024-06-22 15:01:33] 2024-06-22 13:01:27,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 15:01:33] 2024-06-22 13:01:27,544 | INFO     | [monitor] control thread has ended
[2024-06-22 15:01:33] 2024-06-22 13:01:32,138 | INFO     | all workflow threads have been joined
[2024-06-22 15:01:33] 2024-06-22 13:01:32,138 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 15:01:33] 2024-06-22 13:01:32,139 | INFO     | traces error code: 0
[2024-06-22 15:01:33] 2024-06-22 13:01:32,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 15:01:33] 2024-06-22 13:01:32,251 [wrapper] ==== pilot stdout END ====
[2024-06-22 15:01:33] 2024-06-22 13:01:32,253 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 15:01:33] 2024-06-22 13:01:32,255 [wrapper] pilotpid: 4026539
[2024-06-22 15:01:33] 2024-06-22 13:01:32,257 [wrapper] Pilot exit status: 0
[2024-06-22 15:01:33] 2024-06-22 13:01:32,306 [wrapper] pandaids: 6238811742
[2024-06-22 15:01:33] 2024-06-22 13:01:32,367 [wrapper] cleanup supervisor_pilot  643890 4026540
[2024-06-22 15:01:33] 2024-06-22 13:01:32,370 [wrapper] Test setup, not cleaning
[2024-06-22 15:01:33] 2024-06-22 13:01:32,380 [wrapper] ==== wrapper stdout END ====
[2024-06-22 15:01:33] 2024-06-22 13:01:32,393 [wrapper] ==== wrapper stderr END ====
[2024-06-22 15:01:33] 2024-06-22 13:01:32,418 [wrapper] apfmon messages muted
[2024-06-22 15:01:33]  *** Error codes and diagnostics ***
[2024-06-22 15:01:33]     "exeErrorCode": 0,
[2024-06-22 15:01:33]     "exeErrorDiag": "",
[2024-06-22 15:01:33]     "pilotErrorCode": 0,
[2024-06-22 15:01:33]     "pilotErrorDiag": "",
[2024-06-22 15:01:33]  *** Listing of results directory ***
[2024-06-22 15:01:33] total 933324
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:06 pilot3.tar.gz
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc      5654 Jun 20 10:18 queuedata.json
[2024-06-22 15:01:33] -rwx------ 1 boinc boinc     32308 Jun 20 10:18 runpilot2-wrapper.sh
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc       100 Jun 22 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 15:01:33] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 07:08 run_atlas
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc       105 Jun 22 07:08 job.xml
[2024-06-22 15:01:33] -rw-r--r-- 2 boinc boinc     17537 Jun 22 07:08 start_atlas.sh
[2024-06-22 15:01:33] drwxrwx--x 2 boinc boinc      4096 Jun 22 07:08 shared
[2024-06-22 15:01:33] -rw-r--r-- 2 boinc boinc    482524 Jun 22 07:08 input.tar.gz
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc      6454 Jun 22 07:08 init_data.xml
[2024-06-22 15:01:33] -rw-r--r-- 2 boinc boinc 629301288 Jun 22 07:08 EVNT.38776160._000587.pool.root.1
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc         0 Jun 22 07:08 boinc_lockfile
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc      2626 Jun 22 07:08 pandaJob.out
[2024-06-22 15:01:33] -rw------- 1 boinc boinc       424 Jun 22 07:08 setup.sh.local
[2024-06-22 15:01:33] -rw------- 1 boinc boinc   1025953 Jun 22 07:09 agis_schedconf.cvmfs.json
[2024-06-22 15:01:33] -rw------- 1 boinc boinc   1321363 Jun 22 07:09 cric_ddmendpoints.json
[2024-06-22 15:01:33] drwx------ 4 boinc boinc      4096 Jun 22 07:09 pilot3
[2024-06-22 15:01:33] -rw------- 1 boinc boinc 315694737 Jun 22 14:59 HITS.38920982._071745.pool.root.1
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc       533 Jun 22 15:00 boinc_task_state.xml
[2024-06-22 15:01:33] -rw------- 1 boinc boinc      1048 Jun 22 15:00 memory_monitor_summary.json
[2024-06-22 15:01:33] -rw------- 1 boinc boinc         0 Jun 22 15:00 agis_ddmendpoints.agis.ALL.json
[2024-06-22 15:01:33] -rw------- 1 boinc boinc    490379 Jun 22 15:00 log.38920982._071745.job.log.tgz.1
[2024-06-22 15:01:33] -rw------- 1 boinc boinc        95 Jun 22 15:00 pilot_heartbeat.json
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc      8192 Jun 22 15:01 boinc_mmap_file
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc        29 Jun 22 15:01 wrapper_checkpoint.txt
[2024-06-22 15:01:33] -rw------- 1 boinc boinc      7769 Jun 22 15:01 heartbeat.json
[2024-06-22 15:01:33] -rw------- 1 boinc boinc      4345 Jun 22 15:01 pilotlog.txt
[2024-06-22 15:01:33] -rw------- 1 boinc boinc   3104330 Jun 22 15:01 log.38920982._071745.job.log.1
[2024-06-22 15:01:33] -rw------- 1 boinc boinc       357 Jun 22 15:01 output.list
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc       620 Jun 22 15:01 runtime_log
[2024-06-22 15:01:33] -rw------- 1 boinc boinc   3614720 Jun 22 15:01 result.tar.gz
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc     11410 Jun 22 15:01 runtime_log.err
[2024-06-22 15:01:33] -rw------- 1 boinc boinc       660 Jun 22 15:01 OPSKDmyASe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm1zkKDmhLpRGn.diag
[2024-06-22 15:01:33] -rw-r--r-- 1 boinc boinc     21334 Jun 22 15:01 stderr.txt
[2024-06-22 15:01:33] HITS file was successfully produced:
[2024-06-22 15:01:33] -rw------- 1 boinc boinc 315694737 Jun 22 14:59 shared/HITS.pool.root.1
[2024-06-22 15:01:33]  *** Contents of shared directory: ***
[2024-06-22 15:01:33] total 926884
[2024-06-22 15:01:33] -rw-r--r-- 2 boinc boinc     17537 Jun 22 07:08 start_atlas.sh
[2024-06-22 15:01:33] -rw-r--r-- 2 boinc boinc    482524 Jun 22 07:08 input.tar.gz
[2024-06-22 15:01:33] -rw-r--r-- 2 boinc boinc 629301288 Jun 22 07:08 ATLAS.root_0
[2024-06-22 15:01:33] -rw------- 1 boinc boinc 315694737 Jun 22 14:59 HITS.pool.root.1
[2024-06-22 15:01:33] -rw------- 1 boinc boinc   3614720 Jun 22 15:01 result.tar.gz
15:01:34 (4022241): run_atlas exited; CPU time 107270.527004
15:01:34 (4022241): called boinc_finish(0)

</stderr_txt>
]]>

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