Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:59 (1562336): wrapper (7.7.26015): starting
05:43:59 (1562336): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 05:43:59] Arguments: --nthreads 4
[2024-06-21 05:43:59] Threads: 4
[2024-06-21 05:43:59] Checking for CVMFS
[2024-06-21 05:43:59] No cvmfs_config command found, will try listing directly
[2024-06-21 05:43:59] CVMFS is ok
[2024-06-21 05:43:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 05:43:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 05:43:59] Further information can be found at the LHC@home message board.
[2024-06-21 05:43:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 05:43:59] Checking for apptainer binary...
[2024-06-21 05:43:59] which: no apptainer in ((null))
[2024-06-21 05:43:59] apptainer is not installed, using version from CVMFS
[2024-06-21 05:43:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 05:44:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-06-21 05:44:00] apptainer works
[2024-06-21 05:44:01] Set ATHENA_PROC_NUMBER=4
[2024-06-21 05:44:01] Set ATHENA_CORE_NUMBER=4
[2024-06-21 05:44:01] Starting ATLAS job with PandaID=6238809612
[2024-06-21 05:44:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 11:28:09]  *** The last 200 lines of the pilot log: ***
[2024-06-21 11:28:09] 2024-06-21 09:27:47,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 11:28:09] 2024-06-21 09:27:47,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 11:28:09] 2024-06-21 09:27:47,430 | INFO     | fitting pss+swap vs Time
[2024-06-21 11:28:09] 2024-06-21 09:27:47,431 | INFO     | model: linear, x: [1718941534.0, 1718941595.0, 1718941656.0, 1718941717.0, 1718941778.0, 1718941839.0, 1718941900.0, 1718941961.0, 1718942022.0, 1718942083.0, 1718
[2024-06-21 11:28:09] 2024-06-21 09:27:47,431 | INFO     | sum of square deviations: 11867638328.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,434 | INFO     | sum of deviations: 98713636373.99997
[2024-06-21 11:28:09] 2024-06-21 09:27:47,434 | INFO     | mean x: 1718951782.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,434 | INFO     | mean y: 2337991.8724035607
[2024-06-21 11:28:09] 2024-06-21 09:27:47,435 | INFO     | -- intersect: -14295703156.924835
[2024-06-21 11:28:09] 2024-06-21 09:27:47,435 | INFO     | intersect: -14295703156.924835
[2024-06-21 11:28:09] 2024-06-21 09:27:47,435 | INFO     | chi2: 4.191692903235911
[2024-06-21 11:28:09] 2024-06-21 09:27:47,436 | INFO     | model: linear, x: [1718941534.0, 1718941595.0, 1718941656.0, 1718941717.0, 1718941778.0, 1718941839.0, 1718941900.0, 1718941961.0, 1718942022.0, 1718942083.0, 1718
[2024-06-21 11:28:09] 2024-06-21 09:27:47,436 | INFO     | sum of square deviations: 11347200663.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,439 | INFO     | sum of deviations: 118016479576.49998
[2024-06-21 11:28:09] 2024-06-21 09:27:47,439 | INFO     | mean x: 1718951629.5
[2024-06-21 11:28:09] 2024-06-21 09:27:47,440 | INFO     | mean y: 2343573.9006024096
[2024-06-21 11:28:09] 2024-06-21 09:27:47,440 | INFO     | -- intersect: -17875600590.54535
[2024-06-21 11:28:09] 2024-06-21 09:27:47,440 | INFO     | intersect: -17875600590.54535
[2024-06-21 11:28:09] 2024-06-21 09:27:47,440 | INFO     | chi2: 3.4467677821888434
[2024-06-21 11:28:09] 2024-06-21 09:27:47,441 | INFO     | current chi2=3.4467677821888434 (change=17.771462228828803 %)
[2024-06-21 11:28:09] 2024-06-21 09:27:47,441 | INFO     | right removable region: 331
[2024-06-21 11:28:09] 2024-06-21 09:27:47,441 | INFO     | model: linear, x: [1718941839.0, 1718941900.0, 1718941961.0, 1718942022.0, 1718942083.0, 1718942144.0, 1718942205.0, 1718942266.0, 1718942327.0, 1718942388.0, 1718
[2024-06-21 11:28:09] 2024-06-21 09:27:47,441 | INFO     | sum of square deviations: 11347200663.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,445 | INFO     | sum of deviations: 24743341336.500008
[2024-06-21 11:28:09] 2024-06-21 09:27:47,445 | INFO     | mean x: 1718951934.5
[2024-06-21 11:28:09] 2024-06-21 09:27:47,445 | INFO     | mean y: 2359617.1174698793
[2024-06-21 11:28:09] 2024-06-21 09:27:47,445 | INFO     | -- intersect: -3745931765.007928
[2024-06-21 11:28:09] 2024-06-21 09:27:47,445 | INFO     | intersect: -3745931765.007928
[2024-06-21 11:28:09] 2024-06-21 09:27:47,446 | INFO     | chi2: 2.0116417717003885
[2024-06-21 11:28:09] 2024-06-21 09:27:47,446 | INFO     | current chi2=2.0116417717003885 (change=52.00884658922801 %)
[2024-06-21 11:28:09] 2024-06-21 09:27:47,446 | INFO     | model: linear, x: [1718942144.0, 1718942205.0, 1718942266.0, 1718942327.0, 1718942388.0, 1718942449.0, 1718942510.0, 1718942571.0, 1718942632.0, 1718942693.0, 1718
[2024-06-21 11:28:09] 2024-06-21 09:27:47,447 | INFO     | sum of square deviations: 10842205148.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,450 | INFO     | sum of deviations: -29656726606.000004
[2024-06-21 11:28:09] 2024-06-21 09:27:47,450 | INFO     | mean x: 1718952087.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,450 | INFO     | mean y: 2376044.8256880734
[2024-06-21 11:28:09] 2024-06-21 09:27:47,450 | INFO     | -- intersect: 4704232484.276647
[2024-06-21 11:28:09] 2024-06-21 09:27:47,450 | INFO     | intersect: 4704232484.276647
[2024-06-21 11:28:09] 2024-06-21 09:27:47,451 | INFO     | chi2: 0.9471038438405396
[2024-06-21 11:28:09] 2024-06-21 09:27:47,451 | INFO     | current chi2=0.9471038438405396 (change=52.918861739484704 %)
[2024-06-21 11:28:09] 2024-06-21 09:27:47,452 | INFO     | model: linear, x: [1718942449.0, 1718942510.0, 1718942571.0, 1718942632.0, 1718942693.0, 1718942754.0, 1718942815.0, 1718942876.0, 1718942937.0, 1718942998.0, 1718
[2024-06-21 11:28:09] 2024-06-21 09:27:47,452 | INFO     | sum of square deviations: 10352419220.5
[2024-06-21 11:28:09] 2024-06-21 09:27:47,455 | INFO     | sum of deviations: -32396186220.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,455 | INFO     | mean x: 1718952239.5
[2024-06-21 11:28:09] 2024-06-21 09:27:47,456 | INFO     | mean y: 2376871.0621118015
[2024-06-21 11:28:09] 2024-06-21 09:27:47,456 | INFO     | -- intersect: 5381554014.879367
[2024-06-21 11:28:09] 2024-06-21 09:27:47,456 | INFO     | intersect: 5381554014.879367
[2024-06-21 11:28:09] 2024-06-21 09:27:47,456 | INFO     | chi2: 0.9048117325229135
[2024-06-21 11:28:09] 2024-06-21 09:27:47,457 | INFO     | current chi2=0.9048117325229135 (change=4.465414388577509 %)
[2024-06-21 11:28:09] 2024-06-21 09:27:47,457 | INFO     | left removable region: 30
[2024-06-21 11:28:09] 2024-06-21 09:27:47,457 | INFO     | model: linear, x: [1718943364.0, 1718943425.0, 1718943486.0, 1718943547.0, 1718943608.0, 1718943669.0, 1718943730.0, 1718943791.0, 1718943852.0, 1718943913.0, 1718
[2024-06-21 11:28:09] 2024-06-21 09:27:47,457 | INFO     | sum of square deviations: 8456158550.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,460 | INFO     | sum of deviations: 17727732648.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,460 | INFO     | mean x: 1718952514.0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,460 | INFO     | mean y: 2373092.199335548
[2024-06-21 11:28:09] 2024-06-21 09:27:47,460 | INFO     | -- intersect: -3601288123.7791038
[2024-06-21 11:28:09] 2024-06-21 09:27:47,461 | INFO     | intersect: -3601288123.7791038
[2024-06-21 11:28:09] 2024-06-21 09:27:47,461 | INFO     | chi2: 0.0013957920915526661
[2024-06-21 11:28:09] 2024-06-21 09:27:47,461 | INFO     | -- intersect: -3601288123.7791038
[2024-06-21 11:28:09] 2024-06-21 09:27:47,461 | INFO     | current memory leak: 2.10 B/s (using 301 data points, chi2=0.00)
[2024-06-21 11:28:09] 2024-06-21 09:27:47,462 | INFO     | ..............................
[2024-06-21 11:28:09] 2024-06-21 09:27:47,462 | INFO     | . Timing measurements:
[2024-06-21 11:28:09] 2024-06-21 09:27:47,462 | INFO     | . get job = 0 s
[2024-06-21 11:28:09] 2024-06-21 09:27:47,462 | INFO     | . initial setup = 1 s
[2024-06-21 11:28:09] 2024-06-21 09:27:47,463 | INFO     | . payload setup = 14 s
[2024-06-21 11:28:09] 2024-06-21 09:27:47,463 | INFO     | . stage-in = 0 s
[2024-06-21 11:28:09] 2024-06-21 09:27:47,463 | INFO     | . payload execution = 20526 s
[2024-06-21 11:28:09] 2024-06-21 09:27:47,463 | INFO     | . stage-out = 1 s
[2024-06-21 11:28:09] 2024-06-21 09:27:47,463 | INFO     | . log creation = 0 s
[2024-06-21 11:28:09] 2024-06-21 09:27:47,463 | INFO     | ..............................
[2024-06-21 11:28:09] 2024-06-21 09:27:47,573 | INFO     | 
[2024-06-21 11:28:09] 2024-06-21 09:27:47,573 | INFO     | job summary report
[2024-06-21 11:28:09] 2024-06-21 09:27:47,573 | INFO     | --------------------------------------------------
[2024-06-21 11:28:09] 2024-06-21 09:27:47,573 | INFO     | PanDA job id: 6238809612
[2024-06-21 11:28:09] 2024-06-21 09:27:47,573 | INFO     | task id: 40024014
[2024-06-21 11:28:09] 2024-06-21 09:27:47,573 | INFO     | errors: (none)
[2024-06-21 11:28:09] 2024-06-21 09:27:47,573 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 11:28:09] 2024-06-21 09:27:47,574 | INFO     | pilot state: finished 
[2024-06-21 11:28:09] 2024-06-21 09:27:47,574 | INFO     | transexitcode: 0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,574 | INFO     | exeerrorcode: 0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,574 | INFO     | exeerrordiag: 
[2024-06-21 11:28:09] 2024-06-21 09:27:47,574 | INFO     | exitcode: 0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,574 | INFO     | exitmsg: OK
[2024-06-21 11:28:09] 2024-06-21 09:27:47,574 | INFO     | cpuconsumptiontime: 77257 s
[2024-06-21 11:28:09] 2024-06-21 09:27:47,574 | INFO     | nevents: 400
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | neventsw: 0
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | pid: 1574551
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | pgrp: 1574551
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | corecount: 4
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | event service: False
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | sizes: {0: 2385360, 1: 2386906, 12: 2386906, 19: 2387140, 23: 2387168, 20544: 2420437, 20545: 2420564, 20546: 2429600, 20547: 2429656, 20560: 2429826}
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | --------------------------------------------------
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | 
[2024-06-21 11:28:09] 2024-06-21 09:27:47,575 | INFO     | executing command: ls -lF /scratch/boinc/var/slot8/slots/1
[2024-06-21 11:28:09] 2024-06-21 09:27:47,634 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,635 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,635 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,635 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,637 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 11:28:09] 2024-06-21 09:27:47,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,637 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 11:28:09] 2024-06-21 09:27:47,637 | INFO     | job 6238809612 has completed (purged errors)
[2024-06-21 11:28:09] 2024-06-21 09:27:47,637 | INFO     | overall cleanup function is called
[2024-06-21 11:28:09] 2024-06-21 09:27:48,645 | INFO     | --- collectZombieJob: --- 10, [1574551]
[2024-06-21 11:28:09] 2024-06-21 09:27:48,645 | INFO     | zombie collector waiting for pid 1574551
[2024-06-21 11:28:09] 2024-06-21 09:27:48,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 11:28:09] 2024-06-21 09:27:49,650 | INFO     | collected zombie processes
[2024-06-21 11:28:09] 2024-06-21 09:27:49,650 | INFO     | will now attempt to kill all subprocesses of pid=1574551
[2024-06-21 11:28:09] 2024-06-21 09:27:49,779 | INFO     | process IDs to be killed: [1574551] (in reverse order)
[2024-06-21 11:28:09] 2024-06-21 09:27:49,870 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 11:28:09] 2024-06-21 09:27:49,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 11:28:09] 2024-06-21 09:27:49,876 | INFO     | did not find any defunct processes belonging to 1574551
[2024-06-21 11:28:09] 2024-06-21 09:27:49,881 | INFO     | did not find any defunct processes belonging to 1574551
[2024-06-21 11:28:09] 2024-06-21 09:27:49,881 | INFO     | ready for new job
[2024-06-21 11:28:09] 2024-06-21 09:27:49,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 11:28:09] 2024-06-21 09:27:49,883 | INFO     | *************************************
[2024-06-21 11:28:09] 2024-06-21 09:27:49,883 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 11:28:09] 2024-06-21 09:27:49,883 | INFO     | *************************************
[2024-06-21 11:28:09] 2024-06-21 09:27:49,884 | INFO     | 
[2024-06-21 11:28:09] 2024-06-21 09:27:49,886 | INFO     | architecture information:
[2024-06-21 11:28:09] 2024-06-21 09:27:49,886 | INFO     | executing command: cat /etc/os-release
[2024-06-21 11:28:09] 2024-06-21 09:27:49,903 | INFO     | cat /etc/os-release:
[2024-06-21 11:28:09] NAME="CentOS Linux"
[2024-06-21 11:28:09] VERSION="7 (Core)"
[2024-06-21 11:28:09] ID="centos"
[2024-06-21 11:28:09] ID_LIKE="rhel fedora"
[2024-06-21 11:28:09] VERSION_ID="7"
[2024-06-21 11:28:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 11:28:09] ANSI_COLOR="0;31"
[2024-06-21 11:28:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 11:28:09] HOME_URL="https://www.centos.org/"
[2024-06-21 11:28:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 11:28:09] 
[2024-06-21 11:28:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 11:28:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 11:28:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 11:28:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 11:28:09] 
[2024-06-21 11:28:09] 2024-06-21 09:27:49,903 | INFO     | *************************************
[2024-06-21 11:28:09] 2024-06-21 09:27:50,405 | INFO     | executing command: df -mP /scratch/boinc/var/slot8/slots/1
[2024-06-21 11:28:09] 2024-06-21 09:27:50,423 | INFO     | sufficient remaining disk space (1668564385792 B)
[2024-06-21 11:28:09] 2024-06-21 09:27:50,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 11:28:09] 2024-06-21 09:27:50,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 11:28:09] 2024-06-21 09:27:50,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 11:28:09] 2024-06-21 09:27:50,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 11:28:09] 2024-06-21 09:27:50,424 | INFO     | aborting loop
[2024-06-21 11:28:09] 2024-06-21 09:27:50,563 | INFO     | all job control threads have been joined
[2024-06-21 11:28:09] 2024-06-21 09:27:50,696 | INFO     | all data control threads have been joined
[2024-06-21 11:28:09] 2024-06-21 09:27:50,766 | INFO     | all payload control threads have been joined
[2024-06-21 11:28:09] 2024-06-21 09:27:51,015 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 11:28:09] 2024-06-21 09:27:51,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 11:28:09] 2024-06-21 09:27:51,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 11:28:09] 2024-06-21 09:27:51,428 | INFO     | [job] retrieve thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:51,429 | INFO     | [job] job monitor thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:51,568 | INFO     | [job] control thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:51,622 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:51,701 | INFO     | [data] control thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:51,771 | INFO     | [payload] control thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:51,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 11:28:09] 2024-06-21 09:27:52,389 | INFO     | [data] copytool_in thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:52,422 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:52,446 | INFO     | [payload] failed_post thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:52,573 | INFO     | [payload] validate_post thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:52,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 11:28:09] 2024-06-21 09:27:52,637 | INFO     | [job] validate thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:52,659 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:53,587 | INFO     | [job] queue monitor thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:53,836 | INFO     | [data] copytool_out thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:27:54,429 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:28:01,196 | INFO     | job.realtimelogging is not enabled
[2024-06-21 11:28:09] 2024-06-21 09:28:02,201 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 11:28:09] 2024-06-21 09:28:02,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47824821929024)>', '<ExcThread(monitor, started 47825207441152)>']
[2024-06-21 11:28:09] 2024-06-21 09:28:03,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 11:28:09] 2024-06-21 09:28:03,075 | INFO     | [monitor] control thread has ended
[2024-06-21 11:28:09] 2024-06-21 09:28:07,891 | INFO     | all workflow threads have been joined
[2024-06-21 11:28:09] 2024-06-21 09:28:07,891 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 11:28:09] 2024-06-21 09:28:07,892 | INFO     | traces error code: 0
[2024-06-21 11:28:09] 2024-06-21 09:28:07,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 11:28:09] 2024-06-21 09:28:07,979 [wrapper] ==== pilot stdout END ====
[2024-06-21 11:28:09] 2024-06-21 09:28:07,982 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 11:28:09] 2024-06-21 09:28:07,984 [wrapper] pilotpid: 1566772
[2024-06-21 11:28:09] 2024-06-21 09:28:07,986 [wrapper] Pilot exit status: 0
[2024-06-21 11:28:09] 2024-06-21 09:28:08,033 [wrapper] pandaids: 6238809612
[2024-06-21 11:28:09] 2024-06-21 09:28:08,136 [wrapper] cleanup supervisor_pilot 2106484 1566773
[2024-06-21 11:28:09] 2024-06-21 09:28:08,139 [wrapper] Test setup, not cleaning
[2024-06-21 11:28:09] 2024-06-21 09:28:08,141 [wrapper] ==== wrapper stdout END ====
[2024-06-21 11:28:09] 2024-06-21 09:28:08,146 [wrapper] ==== wrapper stderr END ====
[2024-06-21 11:28:09] 2024-06-21 09:28:08,151 [wrapper] apfmon messages muted
[2024-06-21 11:28:09]  *** Error codes and diagnostics ***
[2024-06-21 11:28:09]     "exeErrorCode": 0,
[2024-06-21 11:28:09]     "exeErrorDiag": "",
[2024-06-21 11:28:09]     "pilotErrorCode": 0,
[2024-06-21 11:28:09]     "pilotErrorDiag": "",
[2024-06-21 11:28:09]  *** Listing of results directory ***
[2024-06-21 11:28:09] total 839532
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:06 pilot3.tar.gz
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc      5654 Jun 20 10:15 queuedata.json
[2024-06-21 11:28:09] -rwx------ 1 boinc boinc     32308 Jun 20 10:16 runpilot2-wrapper.sh
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc       100 Jun 21 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 11:28:09] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 05:43 run_atlas
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc       105 Jun 21 05:43 job.xml
[2024-06-21 11:28:09] -rw-r--r-- 2 boinc boinc 593261120 Jun 21 05:43 EVNT.40024012._000006.pool.root.1
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc      6453 Jun 21 05:43 init_data.xml
[2024-06-21 11:28:09] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:43 start_atlas.sh
[2024-06-21 11:28:09] drwxrwx--x 2 boinc boinc      4096 Jun 21 05:43 shared
[2024-06-21 11:28:09] -rw-r--r-- 2 boinc boinc    482481 Jun 21 05:43 input.tar.gz
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc         0 Jun 21 05:43 boinc_lockfile
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc      2506 Jun 21 05:44 pandaJob.out
[2024-06-21 11:28:09] -rw------- 1 boinc boinc       424 Jun 21 05:44 setup.sh.local
[2024-06-21 11:28:09] -rw------- 1 boinc boinc   1024126 Jun 21 05:44 agis_schedconf.cvmfs.json
[2024-06-21 11:28:09] -rw------- 1 boinc boinc   1321251 Jun 21 05:44 cric_ddmendpoints.json
[2024-06-21 11:28:09] drwx------ 4 boinc boinc      4096 Jun 21 05:44 pilot3
[2024-06-21 11:28:09] -rw------- 1 boinc boinc 257835635 Jun 21 11:26 HITS.40024014._000093.pool.root.1
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc       531 Jun 21 11:26 boinc_task_state.xml
[2024-06-21 11:28:09] -rw------- 1 boinc boinc      1045 Jun 21 11:27 memory_monitor_summary.json
[2024-06-21 11:28:09] -rw------- 1 boinc boinc         0 Jun 21 11:27 agis_ddmendpoints.agis.ALL.json
[2024-06-21 11:28:09] -rw------- 1 boinc boinc    412914 Jun 21 11:27 log.40024014._000093.job.log.tgz.1
[2024-06-21 11:28:09] -rw------- 1 boinc boinc        95 Jun 21 11:27 pilot_heartbeat.json
[2024-06-21 11:28:09] -rw------- 1 boinc boinc      7760 Jun 21 11:27 heartbeat.json
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc      8192 Jun 21 11:28 boinc_mmap_file
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc        28 Jun 21 11:28 wrapper_checkpoint.txt
[2024-06-21 11:28:09] -rw------- 1 boinc boinc      4293 Jun 21 11:28 pilotlog.txt
[2024-06-21 11:28:09] -rw------- 1 boinc boinc   2111200 Jun 21 11:28 log.40024014._000093.job.log.1
[2024-06-21 11:28:09] -rw------- 1 boinc boinc       357 Jun 21 11:28 output.list
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc       620 Jun 21 11:28 runtime_log
[2024-06-21 11:28:09] -rw------- 1 boinc boinc   2539520 Jun 21 11:28 result.tar.gz
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc     11391 Jun 21 11:28 runtime_log.err
[2024-06-21 11:28:09] -rw------- 1 boinc boinc       659 Jun 21 11:28 l0hMDm98Re5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmJBXKDmk0YqSm.diag
[2024-06-21 11:28:09] -rw-r--r-- 1 boinc boinc     21323 Jun 21 11:28 stderr.txt
[2024-06-21 11:28:09] HITS file was successfully produced:
[2024-06-21 11:28:09] -rw------- 1 boinc boinc 257835635 Jun 21 11:26 shared/HITS.pool.root.1
[2024-06-21 11:28:09]  *** Contents of shared directory: ***
[2024-06-21 11:28:09] total 834136
[2024-06-21 11:28:09] -rw-r--r-- 2 boinc boinc 593261120 Jun 21 05:43 ATLAS.root_0
[2024-06-21 11:28:09] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:43 start_atlas.sh
[2024-06-21 11:28:09] -rw-r--r-- 2 boinc boinc    482481 Jun 21 05:43 input.tar.gz
[2024-06-21 11:28:09] -rw------- 1 boinc boinc 257835635 Jun 21 11:26 HITS.pool.root.1
[2024-06-21 11:28:09] -rw------- 1 boinc boinc   2539520 Jun 21 11:28 result.tar.gz
11:28:10 (1562336): run_atlas exited; CPU time 77041.805480
11:28:10 (1562336): called boinc_finish(0)

</stderr_txt>
]]>

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