Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:34:18 (1437375): wrapper (7.7.26015): starting
04:34:18 (1437375): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 04:34:18] Arguments: --nthreads 4
[2024-06-21 04:34:18] Threads: 4
[2024-06-21 04:34:18] Checking for CVMFS
[2024-06-21 04:34:18] No cvmfs_config command found, will try listing directly
[2024-06-21 04:34:18] CVMFS is ok
[2024-06-21 04:34:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 04:34:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 04:34:18] Further information can be found at the LHC@home message board.
[2024-06-21 04:34:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 04:34:18] Checking for apptainer binary...
[2024-06-21 04:34:18] which: no apptainer in ((null))
[2024-06-21 04:34:18] apptainer is not installed, using version from CVMFS
[2024-06-21 04:34:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 04:34:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-06-21 04:34:19] apptainer works
[2024-06-21 04:34:19] Set ATHENA_PROC_NUMBER=4
[2024-06-21 04:34:19] Set ATHENA_CORE_NUMBER=4
[2024-06-21 04:34:19] Starting ATLAS job with PandaID=6238809551
[2024-06-21 04:34:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 10:25:16]  *** The last 200 lines of the pilot log: ***
[2024-06-21 10:25:16] 2024-06-21 08:24:56,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 10:25:16] 2024-06-21 08:24:56,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 10:25:16] 2024-06-21 08:24:56,391 | INFO     | fitting pss+swap vs Time
[2024-06-21 10:25:16] 2024-06-21 08:24:56,391 | INFO     | model: linear, x: [1718937291.0, 1718937352.0, 1718937413.0, 1718937474.0, 1718937535.0, 1718937596.0, 1718937657.0, 1718937718.0, 1718937779.0, 1718937840.0, 1718
[2024-06-21 10:25:16] 2024-06-21 08:24:56,392 | INFO     | sum of square deviations: 12733038740.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,395 | INFO     | sum of deviations: 156311003914.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,395 | INFO     | mean x: 1718947783.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,395 | INFO     | mean y: 2323576.988405797
[2024-06-21 10:25:16] 2024-06-21 08:24:56,395 | INFO     | -- intersect: -21099509153.041805
[2024-06-21 10:25:16] 2024-06-21 08:24:56,396 | INFO     | intersect: -21099509153.041805
[2024-06-21 10:25:16] 2024-06-21 08:24:56,396 | INFO     | chi2: 4.941156476631988
[2024-06-21 10:25:16] 2024-06-21 08:24:56,397 | INFO     | model: linear, x: [1718937291.0, 1718937352.0, 1718937413.0, 1718937474.0, 1718937535.0, 1718937596.0, 1718937657.0, 1718937718.0, 1718937779.0, 1718937840.0, 1718
[2024-06-21 10:25:16] 2024-06-21 08:24:56,397 | INFO     | sum of square deviations: 12187409905.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,400 | INFO     | sum of deviations: 175896311367.9999
[2024-06-21 10:25:16] 2024-06-21 08:24:56,400 | INFO     | mean x: 1718947630.5
[2024-06-21 10:25:16] 2024-06-21 08:24:56,401 | INFO     | mean y: 2328978.194117647
[2024-06-21 10:25:16] 2024-06-21 08:24:56,401 | INFO     | -- intersect: -24806596790.001225
[2024-06-21 10:25:16] 2024-06-21 08:24:56,401 | INFO     | intersect: -24806596790.001225
[2024-06-21 10:25:16] 2024-06-21 08:24:56,401 | INFO     | chi2: 4.1527031390325
[2024-06-21 10:25:16] 2024-06-21 08:24:56,402 | INFO     | current chi2=4.1527031390325 (change=15.956858304898638 %)
[2024-06-21 10:25:16] 2024-06-21 08:24:56,402 | INFO     | right removable region: 339
[2024-06-21 10:25:16] 2024-06-21 08:24:56,402 | INFO     | model: linear, x: [1718937596.0, 1718937657.0, 1718937718.0, 1718937779.0, 1718937840.0, 1718937901.0, 1718937962.0, 1718938023.0, 1718938084.0, 1718938145.0, 1718
[2024-06-21 10:25:16] 2024-06-21 08:24:56,402 | INFO     | sum of square deviations: 12187409905.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,406 | INFO     | sum of deviations: 73694053944.99994
[2024-06-21 10:25:16] 2024-06-21 08:24:56,406 | INFO     | mean x: 1718947935.5
[2024-06-21 10:25:16] 2024-06-21 08:24:56,406 | INFO     | mean y: 2346631.6529411767
[2024-06-21 10:25:16] 2024-06-21 08:24:56,406 | INFO     | -- intersect: -10391678257.54137
[2024-06-21 10:25:16] 2024-06-21 08:24:56,406 | INFO     | intersect: -10391678257.54137
[2024-06-21 10:25:16] 2024-06-21 08:24:56,407 | INFO     | chi2: 2.4355879171994337
[2024-06-21 10:25:16] 2024-06-21 08:24:56,407 | INFO     | current chi2=2.4355879171994337 (change=50.70814031658456 %)
[2024-06-21 10:25:16] 2024-06-21 08:24:56,407 | INFO     | model: linear, x: [1718937901.0, 1718937962.0, 1718938023.0, 1718938084.0, 1718938145.0, 1718938206.0, 1718938267.0, 1718938328.0, 1718938389.0, 1718938450.0, 1718
[2024-06-21 10:25:16] 2024-06-21 08:24:56,408 | INFO     | sum of square deviations: 11657595320.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,411 | INFO     | sum of deviations: 6795855365.000004
[2024-06-21 10:25:16] 2024-06-21 08:24:56,411 | INFO     | mean x: 1718948088.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,411 | INFO     | mean y: 2365887.686567164
[2024-06-21 10:25:16] 2024-06-21 08:24:56,411 | INFO     | -- intersect: -999703772.936315
[2024-06-21 10:25:16] 2024-06-21 08:24:56,412 | INFO     | intersect: -999703772.936315
[2024-06-21 10:25:16] 2024-06-21 08:24:56,412 | INFO     | chi2: 0.9246369469677783
[2024-06-21 10:25:16] 2024-06-21 08:24:56,412 | INFO     | current chi2=0.9246369469677783 (change=62.03639620486481 %)
[2024-06-21 10:25:16] 2024-06-21 08:24:56,413 | INFO     | model: linear, x: [1718938206.0, 1718938267.0, 1718938328.0, 1718938389.0, 1718938450.0, 1718938511.0, 1718938572.0, 1718938633.0, 1718938694.0, 1718938755.0, 1718
[2024-06-21 10:25:16] 2024-06-21 08:24:56,413 | INFO     | sum of square deviations: 11143362422.5
[2024-06-21 10:25:16] 2024-06-21 08:24:56,416 | INFO     | sum of deviations: -7607374446.5
[2024-06-21 10:25:16] 2024-06-21 08:24:56,416 | INFO     | mean x: 1718948240.5
[2024-06-21 10:25:16] 2024-06-21 08:24:56,417 | INFO     | mean y: 2370134.2454545456
[2024-06-21 10:25:16] 2024-06-21 08:24:56,417 | INFO     | -- intersect: 1175865388.535326
[2024-06-21 10:25:16] 2024-06-21 08:24:56,417 | INFO     | intersect: 1175865388.535326
[2024-06-21 10:25:16] 2024-06-21 08:24:56,417 | INFO     | chi2: 0.821010153944789
[2024-06-21 10:25:16] 2024-06-21 08:24:56,418 | INFO     | current chi2=0.821010153944789 (change=11.207295291716314 %)
[2024-06-21 10:25:16] 2024-06-21 08:24:56,418 | INFO     | left removable region: 30
[2024-06-21 10:25:16] 2024-06-21 08:24:56,418 | INFO     | model: linear, x: [1718939121.0, 1718939182.0, 1718939243.0, 1718939304.0, 1718939365.0, 1718939426.0, 1718939487.0, 1718939548.0, 1718939609.0, 1718939670.0, 1718
[2024-06-21 10:25:16] 2024-06-21 08:24:56,418 | INFO     | sum of square deviations: 9148487810.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,421 | INFO     | sum of deviations: 11784975703.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,421 | INFO     | mean x: 1718948515.0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,421 | INFO     | mean y: 2376983.019417476
[2024-06-21 10:25:16] 2024-06-21 08:24:56,422 | INFO     | -- intersect: -2211952521.998848
[2024-06-21 10:25:16] 2024-06-21 08:24:56,422 | INFO     | intersect: -2211952521.998848
[2024-06-21 10:25:16] 2024-06-21 08:24:56,422 | INFO     | chi2: 0.0038183641433347437
[2024-06-21 10:25:16] 2024-06-21 08:24:56,422 | INFO     | -- intersect: -2211952521.998848
[2024-06-21 10:25:16] 2024-06-21 08:24:56,423 | INFO     | current memory leak: 1.29 B/s (using 309 data points, chi2=0.00)
[2024-06-21 10:25:16] 2024-06-21 08:24:56,423 | INFO     | ..............................
[2024-06-21 10:25:16] 2024-06-21 08:24:56,423 | INFO     | . Timing measurements:
[2024-06-21 10:25:16] 2024-06-21 08:24:56,423 | INFO     | . get job = 0 s
[2024-06-21 10:25:16] 2024-06-21 08:24:56,424 | INFO     | . initial setup = 1 s
[2024-06-21 10:25:16] 2024-06-21 08:24:56,424 | INFO     | . payload setup = 4 s
[2024-06-21 10:25:16] 2024-06-21 08:24:56,424 | INFO     | . stage-in = 0 s
[2024-06-21 10:25:16] 2024-06-21 08:24:56,424 | INFO     | . payload execution = 20997 s
[2024-06-21 10:25:16] 2024-06-21 08:24:56,424 | INFO     | . stage-out = 0 s
[2024-06-21 10:25:16] 2024-06-21 08:24:56,424 | INFO     | . log creation = 0 s
[2024-06-21 10:25:16] 2024-06-21 08:24:56,424 | INFO     | ..............................
[2024-06-21 10:25:16] 2024-06-21 08:24:56,502 | INFO     | 
[2024-06-21 10:25:16] 2024-06-21 08:24:56,502 | INFO     | job summary report
[2024-06-21 10:25:16] 2024-06-21 08:24:56,502 | INFO     | --------------------------------------------------
[2024-06-21 10:25:16] 2024-06-21 08:24:56,502 | INFO     | PanDA job id: 6238809551
[2024-06-21 10:25:16] 2024-06-21 08:24:56,502 | INFO     | task id: 40024014
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | errors: (none)
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | pilot state: finished 
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | transexitcode: 0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | exeerrorcode: 0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | exeerrordiag: 
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | exitcode: 0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | exitmsg: OK
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | cpuconsumptiontime: 79191 s
[2024-06-21 10:25:16] 2024-06-21 08:24:56,503 | INFO     | nevents: 400
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | neventsw: 0
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | pid: 1448466
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | pgrp: 1448466
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | corecount: 4
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | event service: False
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | sizes: {0: 2386829, 1: 2386857, 4: 2387063, 11: 2387091, 21005: 2420584, 21006: 2429566, 21008: 2429750, 21014: 2429920}
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | --------------------------------------------------
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | 
[2024-06-21 10:25:16] 2024-06-21 08:24:56,504 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-21 10:25:16] 2024-06-21 08:24:56,525 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,525 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,525 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,526 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,526 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,526 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,527 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 10:25:16] 2024-06-21 08:24:56,528 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,528 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 10:25:16] 2024-06-21 08:24:56,528 | INFO     | job 6238809551 has completed (purged errors)
[2024-06-21 10:25:16] 2024-06-21 08:24:56,528 | INFO     | overall cleanup function is called
[2024-06-21 10:25:16] 2024-06-21 08:24:57,535 | INFO     | --- collectZombieJob: --- 10, [1448466]
[2024-06-21 10:25:16] 2024-06-21 08:24:57,535 | INFO     | zombie collector waiting for pid 1448466
[2024-06-21 10:25:16] 2024-06-21 08:24:57,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 10:25:16] 2024-06-21 08:24:58,540 | INFO     | collected zombie processes
[2024-06-21 10:25:16] 2024-06-21 08:24:58,540 | INFO     | will now attempt to kill all subprocesses of pid=1448466
[2024-06-21 10:25:16] 2024-06-21 08:24:58,651 | INFO     | process IDs to be killed: [1448466] (in reverse order)
[2024-06-21 10:25:16] 2024-06-21 08:24:58,742 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 10:25:16] 2024-06-21 08:24:58,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 10:25:16] 2024-06-21 08:24:58,748 | INFO     | did not find any defunct processes belonging to 1448466
[2024-06-21 10:25:16] 2024-06-21 08:24:58,753 | INFO     | did not find any defunct processes belonging to 1448466
[2024-06-21 10:25:16] 2024-06-21 08:24:58,753 | INFO     | ready for new job
[2024-06-21 10:25:16] 2024-06-21 08:24:58,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 10:25:16] 2024-06-21 08:24:58,755 | INFO     | *************************************
[2024-06-21 10:25:16] 2024-06-21 08:24:58,756 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 10:25:16] 2024-06-21 08:24:58,756 | INFO     | *************************************
[2024-06-21 10:25:16] 2024-06-21 08:24:58,756 | INFO     | 
[2024-06-21 10:25:16] 2024-06-21 08:24:58,758 | INFO     | architecture information:
[2024-06-21 10:25:16] 2024-06-21 08:24:58,758 | INFO     | executing command: cat /etc/os-release
[2024-06-21 10:25:16] 2024-06-21 08:24:58,773 | INFO     | cat /etc/os-release:
[2024-06-21 10:25:16] NAME="CentOS Linux"
[2024-06-21 10:25:16] VERSION="7 (Core)"
[2024-06-21 10:25:16] ID="centos"
[2024-06-21 10:25:16] ID_LIKE="rhel fedora"
[2024-06-21 10:25:16] VERSION_ID="7"
[2024-06-21 10:25:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 10:25:16] ANSI_COLOR="0;31"
[2024-06-21 10:25:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 10:25:16] HOME_URL="https://www.centos.org/"
[2024-06-21 10:25:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 10:25:16] 
[2024-06-21 10:25:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 10:25:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 10:25:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 10:25:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 10:25:16] 
[2024-06-21 10:25:16] 2024-06-21 08:24:58,774 | INFO     | *************************************
[2024-06-21 10:25:16] 2024-06-21 08:24:59,276 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-21 10:25:16] 2024-06-21 08:24:59,295 | INFO     | sufficient remaining disk space (1670448676864 B)
[2024-06-21 10:25:16] 2024-06-21 08:24:59,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 10:25:16] 2024-06-21 08:24:59,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 10:25:16] 2024-06-21 08:24:59,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:25:16] 2024-06-21 08:24:59,297 | INFO     | aborting loop
[2024-06-21 10:25:16] 2024-06-21 08:24:59,365 | INFO     | all data control threads have been joined
[2024-06-21 10:25:16] 2024-06-21 08:24:59,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 10:25:16] 2024-06-21 08:25:00,161 | INFO     | all job control threads have been joined
[2024-06-21 10:25:16] 2024-06-21 08:25:00,230 | INFO     | all payload control threads have been joined
[2024-06-21 10:25:16] 2024-06-21 08:25:00,244 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 10:25:16] 2024-06-21 08:25:00,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 10:25:16] 2024-06-21 08:25:00,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 10:25:16] 2024-06-21 08:25:00,301 | INFO     | [job] job monitor thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:00,302 | INFO     | [job] retrieve thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:00,370 | INFO     | [data] control thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:00,638 | INFO     | [job] validate thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:00,884 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:00,927 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:01,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 10:25:16] 2024-06-21 08:25:01,166 | INFO     | [job] control thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:01,235 | INFO     | [payload] control thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:01,299 | INFO     | [payload] failed_post thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:01,340 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:01,400 | INFO     | [data] copytool_out thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:01,471 | INFO     | [data] copytool_in thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:01,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:25:16] 2024-06-21 08:25:01,819 | INFO     | [payload] validate_post thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:02,517 | INFO     | [job] queue monitor thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:05,143 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:09,541 | INFO     | job.realtimelogging is not enabled
[2024-06-21 10:25:16] 2024-06-21 08:25:10,546 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 10:25:16] 2024-06-21 08:25:10,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47688130290752)>', '<ExcThread(monitor, started 47688312665856)>']
[2024-06-21 10:25:16] 2024-06-21 08:25:11,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 10:25:16] 2024-06-21 08:25:11,299 | INFO     | [monitor] control thread has ended
[2024-06-21 10:25:16] 2024-06-21 08:25:15,791 | INFO     | all workflow threads have been joined
[2024-06-21 10:25:16] 2024-06-21 08:25:15,791 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 10:25:16] 2024-06-21 08:25:15,791 | INFO     | traces error code: 0
[2024-06-21 10:25:16] 2024-06-21 08:25:15,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 10:25:16] 2024-06-21 08:25:15,891 [wrapper] ==== pilot stdout END ====
[2024-06-21 10:25:16] 2024-06-21 08:25:15,893 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 10:25:16] 2024-06-21 08:25:15,895 [wrapper] pilotpid: 1441581
[2024-06-21 10:25:16] 2024-06-21 08:25:15,896 [wrapper] Pilot exit status: 0
[2024-06-21 10:25:16] 2024-06-21 08:25:15,906 [wrapper] pandaids: 6238809551
[2024-06-21 10:25:16] 2024-06-21 08:25:15,944 [wrapper] cleanup supervisor_pilot 2025411 1441582
[2024-06-21 10:25:16] 2024-06-21 08:25:15,946 [wrapper] Test setup, not cleaning
[2024-06-21 10:25:16] 2024-06-21 08:25:15,948 [wrapper] ==== wrapper stdout END ====
[2024-06-21 10:25:16] 2024-06-21 08:25:15,949 [wrapper] ==== wrapper stderr END ====
[2024-06-21 10:25:16] 2024-06-21 08:25:15,953 [wrapper] apfmon messages muted
[2024-06-21 10:25:16]  *** Error codes and diagnostics ***
[2024-06-21 10:25:16]     "exeErrorCode": 0,
[2024-06-21 10:25:16]     "exeErrorDiag": "",
[2024-06-21 10:25:16]     "pilotErrorCode": 0,
[2024-06-21 10:25:16]     "pilotErrorDiag": "",
[2024-06-21 10:25:16]  *** Listing of results directory ***
[2024-06-21 10:25:16] total 850464
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:06 pilot3.tar.gz
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc      5654 Jun 20 10:11 queuedata.json
[2024-06-21 10:25:16] -rwx------ 1 boinc boinc     32308 Jun 20 10:11 runpilot2-wrapper.sh
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc       100 Jun 21 04:34 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 10:25:16] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 04:34 run_atlas
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc       105 Jun 21 04:34 job.xml
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc      6454 Jun 21 04:34 init_data.xml
[2024-06-21 10:25:16] -rw-r--r-- 2 boinc boinc 599888711 Jun 21 04:34 EVNT.40024012._000005.pool.root.1
[2024-06-21 10:25:16] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:34 start_atlas.sh
[2024-06-21 10:25:16] drwxrwx--x 2 boinc boinc      4096 Jun 21 04:34 shared
[2024-06-21 10:25:16] -rw-r--r-- 2 boinc boinc    482479 Jun 21 04:34 input.tar.gz
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc         0 Jun 21 04:34 boinc_lockfile
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc      2506 Jun 21 04:34 pandaJob.out
[2024-06-21 10:25:16] -rw------- 1 boinc boinc       424 Jun 21 04:34 setup.sh.local
[2024-06-21 10:25:16] -rw------- 1 boinc boinc   1024126 Jun 21 04:34 agis_schedconf.cvmfs.json
[2024-06-21 10:25:16] -rw------- 1 boinc boinc   1321251 Jun 21 04:34 cric_ddmendpoints.json
[2024-06-21 10:25:16] drwx------ 4 boinc boinc      4096 Jun 21 04:34 pilot3
[2024-06-21 10:25:16] -rw------- 1 boinc boinc 262236435 Jun 21 10:24 HITS.40024014._000070.pool.root.1
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc       532 Jun 21 10:24 boinc_task_state.xml
[2024-06-21 10:25:16] -rw------- 1 boinc boinc        95 Jun 21 10:24 pilot_heartbeat.json
[2024-06-21 10:25:16] -rw------- 1 boinc boinc      1043 Jun 21 10:24 memory_monitor_summary.json
[2024-06-21 10:25:16] -rw------- 1 boinc boinc         0 Jun 21 10:24 agis_ddmendpoints.agis.ALL.json
[2024-06-21 10:25:16] -rw------- 1 boinc boinc    418810 Jun 21 10:24 log.40024014._000070.job.log.tgz.1
[2024-06-21 10:25:16] -rw------- 1 boinc boinc      7751 Jun 21 10:24 heartbeat.json
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc        28 Jun 21 10:25 wrapper_checkpoint.txt
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc      8192 Jun 21 10:25 boinc_mmap_file
[2024-06-21 10:25:16] -rw------- 1 boinc boinc      4294 Jun 21 10:25 pilotlog.txt
[2024-06-21 10:25:16] -rw------- 1 boinc boinc   2188144 Jun 21 10:25 log.40024014._000070.job.log.1
[2024-06-21 10:25:16] -rw------- 1 boinc boinc       357 Jun 21 10:25 output.list
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc       620 Jun 21 10:25 runtime_log
[2024-06-21 10:25:16] -rw------- 1 boinc boinc   2621440 Jun 21 10:25 result.tar.gz
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc     11410 Jun 21 10:25 runtime_log.err
[2024-06-21 10:25:16] -rw------- 1 boinc boinc       657 Jun 21 10:25 oe6MDm83Re5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmuzkKDmVYK7am.diag
[2024-06-21 10:25:16] -rw-r--r-- 1 boinc boinc     21276 Jun 21 10:25 stderr.txt
[2024-06-21 10:25:16] HITS file was successfully produced:
[2024-06-21 10:25:16] -rw------- 1 boinc boinc 262236435 Jun 21 10:24 shared/HITS.pool.root.1
[2024-06-21 10:25:16]  *** Contents of shared directory: ***
[2024-06-21 10:25:16] total 844984
[2024-06-21 10:25:16] -rw-r--r-- 2 boinc boinc 599888711 Jun 21 04:34 ATLAS.root_0
[2024-06-21 10:25:16] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:34 start_atlas.sh
[2024-06-21 10:25:16] -rw-r--r-- 2 boinc boinc    482479 Jun 21 04:34 input.tar.gz
[2024-06-21 10:25:16] -rw------- 1 boinc boinc 262236435 Jun 21 10:24 HITS.pool.root.1
[2024-06-21 10:25:16] -rw------- 1 boinc boinc   2621440 Jun 21 10:25 result.tar.gz
10:25:18 (1437375): run_atlas exited; CPU time 78951.683069
10:25:18 (1437375): called boinc_finish(0)

</stderr_txt>
]]>

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