Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:52:52 (4870): wrapper (7.7.26015): starting
01:52:52 (4870): wrapper: running run_atlas (--nthreads 12)
[2024-06-21 01:52:52] Arguments: --nthreads 12
[2024-06-21 01:52:52] Threads: 12
[2024-06-21 01:52:52] Checking for CVMFS
[2024-06-21 01:52:52] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 01:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 01:52:52] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 01:52:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 01:52:53] 2.10.1.0 196204 233663 139680 134118 2 59 30710170 45568001 5037 130560 0 729667194 99.762 478942327 3013 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-21 01:52:53] CVMFS is ok
[2024-06-21 01:52:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 01:52:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 01:52:53] Further information can be found at the LHC@home message board.
[2024-06-21 01:52:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 01:52:53] Checking for apptainer binary...
[2024-06-21 01:52:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 01:52:53] Running /usr/bin/apptainer --version
[2024-06-21 01:52:53] apptainer version 1.3.2-1.el7
[2024-06-21 01:52:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 01:52:54] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0032.triumf.lcg
[2024-06-21 01:52:54] apptainer works
[2024-06-21 01:52:54] Set ATHENA_PROC_NUMBER=12
[2024-06-21 01:52:54] Set ATHENA_CORE_NUMBER=12
[2024-06-21 01:52:54] Starting ATLAS job with PandaID=6238783867
[2024-06-21 01:52:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 03:01:56]  *** The last 200 lines of the pilot log: ***
[2024-06-21 03:01:56]  direct_access_lan=False
[2024-06-21 03:01:56]  direct_access_wan=False
[2024-06-21 03:01:56]  domain=
[2024-06-21 03:01:56]  filesize=366273
[2024-06-21 03:01:56]  filetype=log
[2024-06-21 03:01:56]  guid=8355861e-d09f-4859-b477-fcc124f66a68
[2024-06-21 03:01:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-21 03:01:56]  is_tar=False
[2024-06-21 03:01:56]  lfn=log.40024058._000069.job.log.tgz.1
[2024-06-21 03:01:56]  mtime=0
[2024-06-21 03:01:56]  protocol_id=None
[2024-06-21 03:01:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-21 03:01:56]  replicas=None
[2024-06-21 03:01:56]  scope=mc23_13p6TeV
[2024-06-21 03:01:56]  status=None
[2024-06-21 03:01:56]  status_code=0
[2024-06-21 03:01:56]  storage_token=
[2024-06-21 03:01:56]  surl=/home/boinc/slots/0/PanDA_Pilot-6238783867/log.40024058._000069.job.log.tgz.1
[2024-06-21 03:01:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/87/log.40024058._000069.job.log.tgz.1
[2024-06-21 03:01:56]  workdir=None
[2024-06-21 03:01:56] ]
[2024-06-21 03:01:56] 2024-06-21 10:01:29,085 | INFO     | transferring file log.40024058._000069.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6238783867/log.40024058._000069.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-21 03:01:56] 2024-06-21 10:01:29,085 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6238783867/log.40024058._000069.job.log.tgz.1 /home/boinc/slots/0/log.40024058._000069.job.log.t
[2024-06-21 03:01:56] 2024-06-21 10:01:29,113 | INFO     | adding to output.list: log.40024058._000069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/87/log.40024058._000069.job.log.tg
[2024-06-21 03:01:56] 2024-06-21 10:01:29,114 | INFO     | summary of transferred files:
[2024-06-21 03:01:56] 2024-06-21 10:01:29,114 | INFO     |  -- lfn=log.40024058._000069.job.log.tgz.1, status_code=0, status=transferred
[2024-06-21 03:01:56] 2024-06-21 10:01:29,115 | INFO     | stage-out finished correctly
[2024-06-21 03:01:56] 2024-06-21 10:01:29,416 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-21 03:01:56] 2024-06-21 10:01:29,506 | INFO     | job 6238783867 has state=finished
[2024-06-21 03:01:56] 2024-06-21 10:01:29,506 | INFO     | preparing for final server update for job 6238783867 in state='finished'
[2024-06-21 03:01:56] 2024-06-21 10:01:29,507 | INFO     | this job has now completed (state=finished)
[2024-06-21 03:01:56] 2024-06-21 10:01:29,507 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-21 03:01:56] 2024-06-21 10:01:29,507 | INFO     | job 6238783867 has finished - writing final server update
[2024-06-21 03:01:56] 2024-06-21 10:01:29,508 | INFO     | total number of processed events: 400 (read)
[2024-06-21 03:01:56] 2024-06-21 10:01:29,515 | INFO     | executing command: lscpu
[2024-06-21 03:01:56] 2024-06-21 10:01:29,584 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-21 03:01:56] 2024-06-21 10:01:29,585 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-21 03:01:56] 2024-06-21 10:01:29,646 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-21 03:01:56] 2024-06-21 10:01:33,447 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-21 03:01:56] 2024-06-21 10:01:33,448 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6238783867/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 03:01:56] 2024-06-21 10:01:33,455 | INFO     | extracted standard info from prmon json
[2024-06-21 03:01:56] 2024-06-21 10:01:33,456 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 03:01:56] 2024-06-21 10:01:33,457 | WARNING  | GPU info not found in prmon json
[2024-06-21 03:01:56] 2024-06-21 10:01:33,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 03:01:56] 2024-06-21 10:01:33,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 03:01:56] 2024-06-21 10:01:33,461 | INFO     | fitting pss+swap vs Time
[2024-06-21 03:01:56] 2024-06-21 10:01:33,461 | INFO     | model: linear, x: [1718960312.0, 1718960373.0, 1718960434.0, 1718960495.0, 1718960556.0, 1718960617.0, 1718960678.0, 1718960739.0, 1718960800.0, 1718960861.0, 1718
[2024-06-21 03:01:56] 2024-06-21 10:01:33,462 | INFO     | sum of square deviations: 66959395.0
[2024-06-21 03:01:56] 2024-06-21 10:01:33,462 | INFO     | sum of deviations: 18392395388.5
[2024-06-21 03:01:56] 2024-06-21 10:01:33,462 | INFO     | mean x: 1718962111.5
[2024-06-21 03:01:56] 2024-06-21 10:01:33,462 | INFO     | mean y: 2568634.75
[2024-06-21 03:01:56] 2024-06-21 10:01:33,462 | INFO     | -- intersect: -472161655856.20935
[2024-06-21 03:01:56] 2024-06-21 10:01:33,463 | INFO     | intersect: -472161655856.20935
[2024-06-21 03:01:56] 2024-06-21 10:01:33,463 | INFO     | chi2: 1.8412229259206128
[2024-06-21 03:01:56] 2024-06-21 10:01:33,463 | INFO     | -- intersect: -472161655856.20935
[2024-06-21 03:01:56] 2024-06-21 10:01:33,464 | INFO     | current memory leak: 274.68 B/s (using 60 data points, chi2=1.84)
[2024-06-21 03:01:56] 2024-06-21 10:01:33,464 | INFO     | ..............................
[2024-06-21 03:01:56] 2024-06-21 10:01:33,464 | INFO     | . Timing measurements:
[2024-06-21 03:01:56] 2024-06-21 10:01:33,464 | INFO     | . get job = 0 s
[2024-06-21 03:01:56] 2024-06-21 10:01:33,465 | INFO     | . initial setup = 2 s
[2024-06-21 03:01:56] 2024-06-21 10:01:33,465 | INFO     | . payload setup = 5 s
[2024-06-21 03:01:56] 2024-06-21 10:01:33,465 | INFO     | . stage-in = 0 s
[2024-06-21 03:01:56] 2024-06-21 10:01:33,465 | INFO     | . payload execution = 4080 s
[2024-06-21 03:01:56] 2024-06-21 10:01:33,465 | INFO     | . stage-out = 0 s
[2024-06-21 03:01:56] 2024-06-21 10:01:33,465 | INFO     | . log creation = 0 s
[2024-06-21 03:01:56] 2024-06-21 10:01:33,465 | INFO     | ..............................
[2024-06-21 03:01:56] 2024-06-21 10:01:33,563 | WARNING  | process 15428 is no longer using CPU - aborting
[2024-06-21 03:01:56] 2024-06-21 10:01:33,563 | INFO     | aborting job monitoring since job object (job id=6238783867) has expired
[2024-06-21 03:01:56] 2024-06-21 10:01:33,685 | INFO     | 
[2024-06-21 03:01:56] 2024-06-21 10:01:33,685 | INFO     | job summary report
[2024-06-21 03:01:56] 2024-06-21 10:01:33,686 | INFO     | --------------------------------------------------
[2024-06-21 03:01:56] 2024-06-21 10:01:33,686 | INFO     | PanDA job id: 6238783867
[2024-06-21 03:01:56] 2024-06-21 10:01:33,686 | INFO     | task id: 40024058
[2024-06-21 03:01:56] 2024-06-21 10:01:33,686 | INFO     | errors: (none)
[2024-06-21 03:01:56] 2024-06-21 10:01:33,686 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 03:01:56] 2024-06-21 10:01:33,686 | INFO     | pilot state: finished 
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | transexitcode: 0
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | exeerrorcode: 0
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | exeerrordiag: 
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | exitcode: 0
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | exitmsg: OK
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | cpuconsumptiontime: 37097 s
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | nevents: 400
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | neventsw: 0
[2024-06-21 03:01:56] 2024-06-21 10:01:33,687 | INFO     | pid: 15428
[2024-06-21 03:01:56] 2024-06-21 10:01:33,688 | INFO     | pgrp: 15428
[2024-06-21 03:01:56] 2024-06-21 10:01:33,688 | INFO     | corecount: 12
[2024-06-21 03:01:56] 2024-06-21 10:01:33,688 | INFO     | event service: False
[2024-06-21 03:01:56] 2024-06-21 10:01:33,688 | INFO     | sizes: {0: 2386689, 1: 2386888, 5: 2387094, 11: 2387150, 4089: 2413087, 4090: 2422041, 4091: 2422225, 4095: 2422395}
[2024-06-21 03:01:56] 2024-06-21 10:01:33,688 | INFO     | --------------------------------------------------
[2024-06-21 03:01:56] 2024-06-21 10:01:33,688 | INFO     | 
[2024-06-21 03:01:56] 2024-06-21 10:01:33,688 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-21 03:01:56] 2024-06-21 10:01:33,721 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,721 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,721 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,721 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,723 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 03:01:56] 2024-06-21 10:01:33,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,723 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 03:01:56] 2024-06-21 10:01:33,724 | INFO     | job 6238783867 has completed (purged errors)
[2024-06-21 03:01:56] 2024-06-21 10:01:33,724 | INFO     | overall cleanup function is called
[2024-06-21 03:01:56] 2024-06-21 10:01:34,733 | INFO     | --- collectZombieJob: --- 10, [15428]
[2024-06-21 03:01:56] 2024-06-21 10:01:34,734 | INFO     | zombie collector waiting for pid 15428
[2024-06-21 03:01:56] 2024-06-21 10:01:34,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 03:01:56] 2024-06-21 10:01:35,740 | INFO     | collected zombie processes
[2024-06-21 03:01:56] 2024-06-21 10:01:35,740 | INFO     | will now attempt to kill all subprocesses of pid=15428
[2024-06-21 03:01:56] 2024-06-21 10:01:35,846 | INFO     | process IDs to be killed: [15428] (in reverse order)
[2024-06-21 03:01:56] 2024-06-21 10:01:35,947 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 03:01:56] 2024-06-21 10:01:35,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 03:01:56] 2024-06-21 10:01:35,955 | INFO     | did not find any defunct processes belonging to 15428
[2024-06-21 03:01:56] 2024-06-21 10:01:35,961 | INFO     | did not find any defunct processes belonging to 15428
[2024-06-21 03:01:56] 2024-06-21 10:01:35,961 | INFO     | ready for new job
[2024-06-21 03:01:56] 2024-06-21 10:01:35,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 03:01:56] 2024-06-21 10:01:35,963 | INFO     | *************************************
[2024-06-21 03:01:56] 2024-06-21 10:01:35,964 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 03:01:56] 2024-06-21 10:01:35,964 | INFO     | *************************************
[2024-06-21 03:01:56] 2024-06-21 10:01:35,964 | INFO     | 
[2024-06-21 03:01:56] 2024-06-21 10:01:35,969 | INFO     | architecture information:
[2024-06-21 03:01:56] 2024-06-21 10:01:35,969 | INFO     | executing command: cat /etc/os-release
[2024-06-21 03:01:56] 2024-06-21 10:01:35,993 | INFO     | cat /etc/os-release:
[2024-06-21 03:01:56] NAME="CentOS Linux"
[2024-06-21 03:01:56] VERSION="7 (Core)"
[2024-06-21 03:01:56] ID="centos"
[2024-06-21 03:01:56] ID_LIKE="rhel fedora"
[2024-06-21 03:01:56] VERSION_ID="7"
[2024-06-21 03:01:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 03:01:56] ANSI_COLOR="0;31"
[2024-06-21 03:01:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 03:01:56] HOME_URL="https://www.centos.org/"
[2024-06-21 03:01:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 03:01:56] 
[2024-06-21 03:01:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 03:01:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 03:01:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 03:01:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 03:01:56] 
[2024-06-21 03:01:56] 2024-06-21 10:01:35,993 | INFO     | *************************************
[2024-06-21 03:01:56] 2024-06-21 10:01:36,497 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-21 03:01:56] 2024-06-21 10:01:36,524 | INFO     | sufficient remaining disk space (2095181725696 B)
[2024-06-21 03:01:56] 2024-06-21 10:01:36,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 03:01:56] 2024-06-21 10:01:36,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 03:01:56] 2024-06-21 10:01:36,525 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 03:01:56] 2024-06-21 10:01:36,526 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 03:01:56] 2024-06-21 10:01:36,526 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 03:01:56] 2024-06-21 10:01:36,526 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 03:01:56] 2024-06-21 10:01:36,954 | INFO     | all job control threads have been joined
[2024-06-21 03:01:56] 2024-06-21 10:01:37,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 03:01:56] 2024-06-21 10:01:37,074 | INFO     | aborting loop
[2024-06-21 03:01:56] 2024-06-21 10:01:37,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 03:01:56] 2024-06-21 10:01:37,384 | INFO     | all data control threads have been joined
[2024-06-21 03:01:56] 2024-06-21 10:01:37,530 | INFO     | [job] retrieve thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:37,884 | INFO     | all payload control threads have been joined
[2024-06-21 03:01:56] 2024-06-21 10:01:37,893 | INFO     | [job] validate thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:37,961 | INFO     | [job] control thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,043 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,079 | INFO     | [job] job monitor thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,195 | INFO     | [payload] failed_post thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,242 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,386 | INFO     | [data] control thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,508 | INFO     | [data] copytool_in thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 03:01:56] 2024-06-21 10:01:38,723 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,849 | INFO     | [payload] validate_post thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:38,890 | INFO     | [payload] control thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:39,191 | INFO     | [data] copytool_out thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:39,577 | INFO     | [job] queue monitor thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:40,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 03:01:56] 2024-06-21 10:01:44,026 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:47,339 | INFO     | job.realtimelogging is not enabled
[2024-06-21 03:01:56] 2024-06-21 10:01:48,343 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 03:01:56] 2024-06-21 10:01:49,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677555119936)>', '<ExcThread(monitor, started 140677123913472)>']
[2024-06-21 03:01:56] 2024-06-21 10:01:49,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 03:01:56] 2024-06-21 10:01:49,591 | INFO     | [monitor] control thread has ended
[2024-06-21 03:01:56] 2024-06-21 10:01:54,593 | INFO     | all workflow threads have been joined
[2024-06-21 03:01:56] 2024-06-21 10:01:54,594 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 03:01:56] 2024-06-21 10:01:54,594 | INFO     | traces error code: 0
[2024-06-21 03:01:56] 2024-06-21 10:01:54,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 03:01:56] 2024-06-21 10:01:54,718 [wrapper] ==== pilot stdout END ====
[2024-06-21 03:01:56] 2024-06-21 10:01:54,722 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 03:01:56] 2024-06-21 10:01:54,726 [wrapper] pilotpid: 9032
[2024-06-21 03:01:56] 2024-06-21 10:01:54,731 [wrapper] Pilot exit status: 0
[2024-06-21 03:01:56] 2024-06-21 10:01:54,743 [wrapper] pandaids: 6238783867
[2024-06-21 03:01:56] 2024-06-21 10:01:54,800 [wrapper] cleanup supervisor_pilot  44607 9033
[2024-06-21 03:01:56] 2024-06-21 10:01:54,803 [wrapper] Test setup, not cleaning
[2024-06-21 03:01:56] 2024-06-21 10:01:54,807 [wrapper] ==== wrapper stdout END ====
[2024-06-21 03:01:56] 2024-06-21 10:01:54,810 [wrapper] ==== wrapper stderr END ====
[2024-06-21 03:01:56] 2024-06-21 10:01:54,816 [wrapper] apfmon messages muted
[2024-06-21 03:01:56]  *** Error codes and diagnostics ***
[2024-06-21 03:01:56]     "exeErrorCode": 0,
[2024-06-21 03:01:56]     "exeErrorDiag": "",
[2024-06-21 03:01:56]     "pilotErrorCode": 0,
[2024-06-21 03:01:56]     "pilotErrorDiag": "",
[2024-06-21 03:01:56]  *** Listing of results directory ***
[2024-06-21 03:01:56] total 870724
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc    469766 Jun 19 23:52 pilot3.tar.gz
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc      5654 Jun 20 00:01 queuedata.json
[2024-06-21 03:01:56] -rwx------ 1 boinc boinc     32308 Jun 20 00:02 runpilot2-wrapper.sh
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc       100 Jun 21 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 03:01:56] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 01:52 run_atlas
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc       105 Jun 21 01:52 job.xml
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc      6628 Jun 21 01:52 init_data.xml
[2024-06-21 03:01:56] -rw-r--r-- 2 boinc boinc 611813080 Jun 21 01:52 EVNT.40024055._000003.pool.root.1
[2024-06-21 03:01:56] drwxrwx--x 2 boinc boinc      4096 Jun 21 01:52 shared
[2024-06-21 03:01:56] -rw-r--r-- 2 boinc boinc    482495 Jun 21 01:52 input.tar.gz
[2024-06-21 03:01:56] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:52 start_atlas.sh
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc         0 Jun 21 01:52 boinc_lockfile
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc      2549 Jun 21 01:52 pandaJob.out
[2024-06-21 03:01:56] -rw------- 1 boinc boinc       424 Jun 21 01:52 setup.sh.local
[2024-06-21 03:01:56] -rw------- 1 boinc boinc   1023459 Jun 21 01:53 agis_schedconf.cvmfs.json
[2024-06-21 03:01:56] -rw------- 1 boinc boinc         0 Jun 21 01:53 agis_ddmendpoints.agis.ALL.json
[2024-06-21 03:01:56] -rw------- 1 boinc boinc   1321251 Jun 21 01:53 cric_ddmendpoints.json
[2024-06-21 03:01:56] drwx------ 4 boinc boinc      4096 Jun 21 01:53 pilot3
[2024-06-21 03:01:56] -rw------- 1 boinc boinc 274756571 Jun 21 03:00 HITS.40024058._000069.pool.root.1
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc       530 Jun 21 03:00 boinc_task_state.xml
[2024-06-21 03:01:56] -rw------- 1 boinc boinc        95 Jun 21 03:01 pilot_heartbeat.json
[2024-06-21 03:01:56] -rw------- 1 boinc boinc      1049 Jun 21 03:01 memory_monitor_summary.json
[2024-06-21 03:01:56] -rw------- 1 boinc boinc    366273 Jun 21 03:01 log.40024058._000069.job.log.tgz.1
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc      8192 Jun 21 03:01 boinc_mmap_file
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc        27 Jun 21 03:01 wrapper_checkpoint.txt
[2024-06-21 03:01:56] -rw------- 1 boinc boinc      7756 Jun 21 03:01 heartbeat.json
[2024-06-21 03:01:56] -rw------- 1 boinc boinc      4405 Jun 21 03:01 pilotlog.txt
[2024-06-21 03:01:56] -rw------- 1 boinc boinc    391895 Jun 21 03:01 log.40024058._000069.job.log.1
[2024-06-21 03:01:56] -rw------- 1 boinc boinc       357 Jun 21 03:01 output.list
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc       620 Jun 21 03:01 runtime_log
[2024-06-21 03:01:56] -rw------- 1 boinc boinc    778240 Jun 21 03:01 result.tar.gz
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc     11286 Jun 21 03:01 runtime_log.err
[2024-06-21 03:01:56] -rw------- 1 boinc boinc       652 Jun 21 03:01 KhKODmwzQe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm6vkKDmGP6Uen.diag
[2024-06-21 03:01:56] -rw-r--r-- 1 boinc boinc     21317 Jun 21 03:01 stderr.txt
[2024-06-21 03:01:56] HITS file was successfully produced:
[2024-06-21 03:01:56] -rw------- 1 boinc boinc 274756571 Jun 21 03:00 shared/HITS.pool.root.1
[2024-06-21 03:01:56]  *** Contents of shared directory: ***
[2024-06-21 03:01:56] total 867056
[2024-06-21 03:01:56] -rw-r--r-- 2 boinc boinc 611813080 Jun 21 01:52 ATLAS.root_0
[2024-06-21 03:01:56] -rw-r--r-- 2 boinc boinc    482495 Jun 21 01:52 input.tar.gz
[2024-06-21 03:01:56] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:52 start_atlas.sh
[2024-06-21 03:01:56] -rw------- 1 boinc boinc 274756571 Jun 21 03:00 HITS.pool.root.1
[2024-06-21 03:01:56] -rw------- 1 boinc boinc    778240 Jun 21 03:01 result.tar.gz
03:01:57 (4870): run_atlas exited; CPU time 36984.071279
03:01:57 (4870): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN