Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:18:07 (89561): wrapper (7.7.26015): starting
09:18:07 (89561): wrapper: running run_atlas (--nthreads 8)
[2024-06-20 09:18:07] Arguments: --nthreads 8
[2024-06-20 09:18:07] Threads: 8
[2024-06-20 09:18:07] Checking for CVMFS
[2024-06-20 09:18:07] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 09:18:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 09:18:07] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 09:18:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 09:18:08] 2.11.2.0 45665 3002 98016 134088 0 479 16358832 18432000 21052 130560 0 17883334 98.910 36770708 45298 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-20 09:18:08] CVMFS is ok
[2024-06-20 09:18:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 09:18:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 09:18:08] Further information can be found at the LHC@home message board.
[2024-06-20 09:18:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 09:18:08] Checking for apptainer binary...
[2024-06-20 09:18:08] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 09:18:08] Running /usr/bin/apptainer --version
[2024-06-20 09:18:09] apptainer version 1.3.2-1.el7
[2024-06-20 09:18:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 09:18:27] c-212-7.aglt2.org
[2024-06-20 09:18:27] apptainer works
[2024-06-20 09:18:27] Set ATHENA_PROC_NUMBER=8
[2024-06-20 09:18:27] Set ATHENA_CORE_NUMBER=8
[2024-06-20 09:18:27] Starting ATLAS job with PandaID=6238779983
[2024-06-20 09:18:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 13:55:21]  *** The last 200 lines of the pilot log: ***
[2024-06-20 13:55:21] 2024-06-20 17:54:47,384 | INFO     | monitor loop #1203: job 0:6238779983 is in state 'finished'
[2024-06-20 13:55:21] 2024-06-20 17:54:47,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:55:21] 2024-06-20 17:54:49,892 | INFO     | monitor loop #1204: job 0:6238779983 is in state 'finished'
[2024-06-20 13:55:21] 2024-06-20 17:54:49,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:55:21] 2024-06-20 17:54:52,405 | INFO     | monitor loop #1205: job 0:6238779983 is in state 'finished'
[2024-06-20 13:55:21] 2024-06-20 17:54:52,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:55:21] 2024-06-20 17:54:54,910 | INFO     | monitor loop #1206: job 0:6238779983 is in state 'finished'
[2024-06-20 13:55:21] 2024-06-20 17:54:54,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:55:21] 2024-06-20 17:54:57,416 | INFO     | monitor loop #1207: job 0:6238779983 is in state 'finished'
[2024-06-20 13:55:21] 2024-06-20 17:54:57,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:55:21] 2024-06-20 17:54:59,921 | INFO     | monitor loop #1208: job 0:6238779983 is in state 'finished'
[2024-06-20 13:55:21] 2024-06-20 17:54:59,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:55:21] 2024-06-20 17:55:02,426 | INFO     | monitor loop #1209: job 0:6238779983 is in state 'finished'
[2024-06-20 13:55:21] 2024-06-20 17:55:02,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:55:21] 2024-06-20 17:55:04,109 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-20 13:55:21] 2024-06-20 17:55:04,109 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6238779983/memory_monitor_summary.json (trf name=prmon)
[2024-06-20 13:55:21] 2024-06-20 17:55:04,110 | INFO     | extracted standard info from prmon json
[2024-06-20 13:55:21] 2024-06-20 17:55:04,110 | INFO     | extracted standard memory fields from prmon json
[2024-06-20 13:55:21] 2024-06-20 17:55:04,110 | WARNING  | GPU info not found in prmon json
[2024-06-20 13:55:21] 2024-06-20 17:55:04,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-20 13:55:21] 2024-06-20 17:55:04,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 13:55:21] 2024-06-20 17:55:04,116 | INFO     | fitting pss+swap vs Time
[2024-06-20 13:55:21] 2024-06-20 17:55:04,117 | INFO     | model: linear, x: [1718889893.0, 1718889954.0, 1718890015.0, 1718890076.0, 1718890137.0, 1718890198.0, 1718890259.0, 1718890320.0, 1718890381.0, 1718890442.0, 1718
[2024-06-20 13:55:21] 2024-06-20 17:55:04,117 | INFO     | sum of square deviations: 5770527544.543357
[2024-06-20 13:55:21] 2024-06-20 17:55:04,119 | INFO     | sum of deviations: 476743370660.5204
[2024-06-20 13:55:21] 2024-06-20 17:55:04,119 | INFO     | mean x: 1718897945.0415094
[2024-06-20 13:55:21] 2024-06-20 17:55:04,119 | INFO     | mean y: 2271802.4981132075
[2024-06-20 13:55:21] 2024-06-20 17:55:04,119 | INFO     | -- intersect: -142007829321.69278
[2024-06-20 13:55:21] 2024-06-20 17:55:04,120 | INFO     | intersect: -142007829321.69278
[2024-06-20 13:55:21] 2024-06-20 17:55:04,120 | INFO     | chi2: 18.154457032527613
[2024-06-20 13:55:21] 2024-06-20 17:55:04,120 | INFO     | model: linear, x: [1718889893.0, 1718889954.0, 1718890015.0, 1718890076.0, 1718890137.0, 1718890198.0, 1718890259.0, 1718890320.0, 1718890381.0, 1718890442.0, 1718
[2024-06-20 13:55:21] 2024-06-20 17:55:04,121 | INFO     | sum of square deviations: 5450022564.534599
[2024-06-20 13:55:21] 2024-06-20 17:55:04,122 | INFO     | sum of deviations: 483845123752.242
[2024-06-20 13:55:21] 2024-06-20 17:55:04,123 | INFO     | mean x: 1718897792.5423076
[2024-06-20 13:55:21] 2024-06-20 17:55:04,123 | INFO     | mean y: 2275050.296153846
[2024-06-20 13:55:21] 2024-06-20 17:55:04,123 | INFO     | -- intersect: -152598985825.6043
[2024-06-20 13:55:21] 2024-06-20 17:55:04,123 | INFO     | intersect: -152598985825.6043
[2024-06-20 13:55:21] 2024-06-20 17:55:04,123 | INFO     | chi2: 17.218632422172874
[2024-06-20 13:55:21] 2024-06-20 17:55:04,123 | INFO     | current chi2=17.218632422172874 (change=5.154792614717193 %)
[2024-06-20 13:55:21] 2024-06-20 17:55:04,124 | INFO     | right removable region: 259
[2024-06-20 13:55:21] 2024-06-20 17:55:04,124 | INFO     | model: linear, x: [1718890198.0, 1718890259.0, 1718890320.0, 1718890381.0, 1718890442.0, 1718890503.0, 1718890564.0, 1718890625.0, 1718890686.0, 1718890747.0, 1718
[2024-06-20 13:55:21] 2024-06-20 17:55:04,124 | INFO     | sum of square deviations: 5450015854.534598
[2024-06-20 13:55:21] 2024-06-20 17:55:04,126 | INFO     | sum of deviations: 393444345347.37714
[2024-06-20 13:55:21] 2024-06-20 17:55:04,126 | INFO     | mean x: 1718898097.5423076
[2024-06-20 13:55:21] 2024-06-20 17:55:04,126 | INFO     | mean y: 2311408.2384615387
[2024-06-20 13:55:21] 2024-06-20 17:55:04,126 | INFO     | -- intersect: -124087371036.20587
[2024-06-20 13:55:21] 2024-06-20 17:55:04,127 | INFO     | intersect: -124087371036.20587
[2024-06-20 13:55:21] 2024-06-20 17:55:04,127 | INFO     | chi2: 13.622695695641548
[2024-06-20 13:55:21] 2024-06-20 17:55:04,127 | INFO     | current chi2=13.622695695641548 (change=24.96225212776367 %)
[2024-06-20 13:55:21] 2024-06-20 17:55:04,127 | INFO     | left removable region: 10
[2024-06-20 13:55:21] 2024-06-20 17:55:04,127 | INFO     | model: linear, x: [1718890503.0, 1718890564.0, 1718890625.0, 1718890686.0, 1718890747.0, 1718890808.0, 1718890869.0, 1718890930.0, 1718890991.0, 1718891052.0, 1718
[2024-06-20 13:55:21] 2024-06-20 17:55:04,128 | INFO     | sum of square deviations: 4787138980.514076
[2024-06-20 13:55:21] 2024-06-20 17:55:04,129 | INFO     | sum of deviations: 337662614913.0
[2024-06-20 13:55:21] 2024-06-20 17:55:04,129 | INFO     | mean x: 1718898067.0441768
[2024-06-20 13:55:21] 2024-06-20 17:55:04,130 | INFO     | mean y: 2346873.0
[2024-06-20 13:55:21] 2024-06-20 17:55:04,130 | INFO     | -- intersect: -121240762727.4465
[2024-06-20 13:55:21] 2024-06-20 17:55:04,130 | INFO     | intersect: -121240762727.4465
[2024-06-20 13:55:21] 2024-06-20 17:55:04,130 | INFO     | chi2: 10.4183402002372
[2024-06-20 13:55:21] 2024-06-20 17:55:04,130 | INFO     | -- intersect: -121240762727.4465
[2024-06-20 13:55:21] 2024-06-20 17:55:04,130 | INFO     | current memory leak: 70.54 B/s (using 249 data points, chi2=10.42)
[2024-06-20 13:55:21] 2024-06-20 17:55:04,131 | INFO     | ..............................
[2024-06-20 13:55:21] 2024-06-20 17:55:04,131 | INFO     | . Timing measurements:
[2024-06-20 13:55:21] 2024-06-20 17:55:04,131 | INFO     | . get job = 0 s
[2024-06-20 13:55:21] 2024-06-20 17:55:04,131 | INFO     | . initial setup = 7 s
[2024-06-20 13:55:21] 2024-06-20 17:55:04,131 | INFO     | . payload setup = 77 s
[2024-06-20 13:55:21] 2024-06-20 17:55:04,132 | INFO     | . stage-in = 0 s
[2024-06-20 13:55:21] 2024-06-20 17:55:04,132 | INFO     | . payload execution = 16227 s
[2024-06-20 13:55:21] 2024-06-20 17:55:04,132 | INFO     | . stage-out = 3 s
[2024-06-20 13:55:21] 2024-06-20 17:55:04,132 | INFO     | . log creation = 0 s
[2024-06-20 13:55:21] 2024-06-20 17:55:04,132 | INFO     | ..............................
[2024-06-20 13:55:21] 2024-06-20 17:55:04,272 | INFO     | 
[2024-06-20 13:55:21] 2024-06-20 17:55:04,272 | INFO     | job summary report
[2024-06-20 13:55:21] 2024-06-20 17:55:04,272 | INFO     | --------------------------------------------------
[2024-06-20 13:55:21] 2024-06-20 17:55:04,272 | INFO     | PanDA job id: 6238779983
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | task id: 40024040
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | errors: (none)
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | pilot state: finished 
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | transexitcode: 0
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | exeerrorcode: 0
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | exeerrordiag: 
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | exitcode: 0
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | exitmsg: OK
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | cpuconsumptiontime: 50137 s
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | nevents: 400
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | neventsw: 0
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | pid: 75908
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | pgrp: 75908
[2024-06-20 13:55:21] 2024-06-20 17:55:04,273 | INFO     | corecount: 8
[2024-06-20 13:55:21] 2024-06-20 17:55:04,274 | INFO     | event service: False
[2024-06-20 13:55:21] 2024-06-20 17:55:04,274 | INFO     | sizes: {0: 2385927, 1: 2386862, 12: 2386862, 23: 2386890, 33: 2386918, 44: 2386946, 50: 2387308, 55: 2387336, 16310: 2418307, 16311: 2418306, 16315: 2427658, 16371
[2024-06-20 13:55:21] 2024-06-20 17:55:04,274 | INFO     | --------------------------------------------------
[2024-06-20 13:55:21] 2024-06-20 17:55:04,274 | INFO     | 
[2024-06-20 13:55:21] 2024-06-20 17:55:04,274 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-20 13:55:21] 2024-06-20 17:55:04,560 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | job 6238779983 has completed (purged errors)
[2024-06-20 13:55:21] 2024-06-20 17:55:04,562 | INFO     | overall cleanup function is called
[2024-06-20 13:55:21] 2024-06-20 17:55:05,600 | INFO     | --- collectZombieJob: --- 10, [75908]
[2024-06-20 13:55:21] 2024-06-20 17:55:05,600 | INFO     | zombie collector waiting for pid 75908
[2024-06-20 13:55:21] 2024-06-20 17:55:05,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 13:55:21] 2024-06-20 17:55:06,607 | INFO     | collected zombie processes
[2024-06-20 13:55:21] 2024-06-20 17:55:06,607 | INFO     | will now attempt to kill all subprocesses of pid=75908
[2024-06-20 13:55:21] 2024-06-20 17:55:07,425 | INFO     | process IDs to be killed: [75908] (in reverse order)
[2024-06-20 13:55:21] 2024-06-20 17:55:08,306 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 13:55:21] 2024-06-20 17:55:08,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 13:55:21] 2024-06-20 17:55:08,374 | INFO     | did not find any defunct processes belonging to 75908
[2024-06-20 13:55:21] 2024-06-20 17:55:08,392 | INFO     | did not find any defunct processes belonging to 75908
[2024-06-20 13:55:21] 2024-06-20 17:55:08,393 | INFO     | ready for new job
[2024-06-20 13:55:21] 2024-06-20 17:55:08,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 13:55:21] 2024-06-20 17:55:08,395 | INFO     | *************************************
[2024-06-20 13:55:21] 2024-06-20 17:55:08,395 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 13:55:21] 2024-06-20 17:55:08,395 | INFO     | *************************************
[2024-06-20 13:55:21] 2024-06-20 17:55:08,395 | INFO     | 
[2024-06-20 13:55:21] 2024-06-20 17:55:08,408 | INFO     | architecture information:
[2024-06-20 13:55:21] 2024-06-20 17:55:08,409 | INFO     | executing command: cat /etc/os-release
[2024-06-20 13:55:21] 2024-06-20 17:55:08,535 | INFO     | cat /etc/os-release:
[2024-06-20 13:55:21] NAME="CentOS Linux"
[2024-06-20 13:55:21] VERSION="7 (Core)"
[2024-06-20 13:55:21] ID="centos"
[2024-06-20 13:55:21] ID_LIKE="rhel fedora"
[2024-06-20 13:55:21] VERSION_ID="7"
[2024-06-20 13:55:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 13:55:21] ANSI_COLOR="0;31"
[2024-06-20 13:55:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 13:55:21] HOME_URL="https://www.centos.org/"
[2024-06-20 13:55:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 13:55:21] 
[2024-06-20 13:55:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 13:55:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 13:55:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 13:55:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 13:55:21] 
[2024-06-20 13:55:21] 2024-06-20 17:55:08,535 | INFO     | *************************************
[2024-06-20 13:55:21] 2024-06-20 17:55:09,038 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-20 13:55:21] 2024-06-20 17:55:09,215 | INFO     | sufficient remaining disk space (99446947840 B)
[2024-06-20 13:55:21] 2024-06-20 17:55:09,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 13:55:21] 2024-06-20 17:55:09,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 13:55:21] 2024-06-20 17:55:09,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 13:55:21] 2024-06-20 17:55:09,216 | INFO     | aborting loop
[2024-06-20 13:55:21] 2024-06-20 17:55:09,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 13:55:21] 2024-06-20 17:55:09,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 13:55:21] 2024-06-20 17:55:09,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 13:55:21] 2024-06-20 17:55:09,513 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 13:55:21] 2024-06-20 17:55:09,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 13:55:21] 2024-06-20 17:55:09,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 13:55:21] 2024-06-20 17:55:09,570 | INFO     | all data control threads have been joined
[2024-06-20 13:55:21] 2024-06-20 17:55:10,221 | INFO     | [job] retrieve thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:10,222 | INFO     | [job] job monitor thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:10,284 | INFO     | all payload control threads have been joined
[2024-06-20 13:55:21] 2024-06-20 17:55:10,294 | INFO     | [job] queue monitor thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:10,498 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:10,562 | INFO     | [payload] failed_post thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:10,576 | INFO     | [data] control thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:10,679 | INFO     | all job control threads have been joined
[2024-06-20 13:55:21] 2024-06-20 17:55:10,983 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:11,068 | INFO     | [data] copytool_in thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:11,106 | INFO     | [job] validate thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:11,118 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:11,136 | INFO     | [payload] validate_post thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:11,196 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:11,227 | INFO     | [data] copytool_out thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:11,290 | INFO     | [payload] control thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:11,689 | INFO     | [job] control thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:13,233 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 13:55:21] 2024-06-20 17:55:13,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774541600576)>', '<ExcThread(monitor, started 139774115432192)>']
[2024-06-20 13:55:21] 2024-06-20 17:55:14,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 13:55:21] 2024-06-20 17:55:14,553 | INFO     | [monitor] control thread has ended
[2024-06-20 13:55:21] 2024-06-20 17:55:18,823 | INFO     | all workflow threads have been joined
[2024-06-20 13:55:21] 2024-06-20 17:55:18,823 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 13:55:21] 2024-06-20 17:55:18,824 | INFO     | traces error code: 0
[2024-06-20 13:55:21] 2024-06-20 17:55:18,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 13:55:21] 2024-06-20 17:55:19,488 [wrapper] ==== pilot stdout END ====
[2024-06-20 13:55:21] 2024-06-20 17:55:19,527 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 13:55:21] 2024-06-20 17:55:19,560 [wrapper] pilotpid: 31388
[2024-06-20 13:55:21] 2024-06-20 17:55:19,596 [wrapper] Pilot exit status: 0
[2024-06-20 13:55:21] 2024-06-20 17:55:19,749 [wrapper] pandaids: 6238779983
[2024-06-20 13:55:21] 2024-06-20 17:55:19,896 [wrapper] cleanup supervisor_pilot 15648 31389
[2024-06-20 13:55:21] 2024-06-20 17:55:19,933 [wrapper] Test setup, not cleaning
[2024-06-20 13:55:21] 2024-06-20 17:55:19,964 [wrapper] ==== wrapper stdout END ====
[2024-06-20 13:55:21] 2024-06-20 17:55:20,006 [wrapper] ==== wrapper stderr END ====
[2024-06-20 13:55:21] 2024-06-20 17:55:20,084 [wrapper] apfmon messages muted
[2024-06-20 13:55:21]  *** Error codes and diagnostics ***
[2024-06-20 13:55:21]     "exeErrorCode": 0,
[2024-06-20 13:55:21]     "exeErrorDiag": "",
[2024-06-20 13:55:21]     "pilotErrorCode": 0,
[2024-06-20 13:55:21]     "pilotErrorDiag": "",
[2024-06-20 13:55:21]  *** Listing of results directory ***
[2024-06-20 13:55:21] total 868108
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas    469766 Jun 20 01:52 pilot3.tar.gz
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas      5654 Jun 20 02:18 queuedata.json
[2024-06-20 13:55:21] -rwx------ 1 boincer umatlas     32308 Jun 20 02:20 runpilot2-wrapper.sh
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas       100 Jun 20 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 13:55:21] -rwxr-xr-x 1 boincer umatlas      7986 Jun 20 09:18 run_atlas
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas       105 Jun 20 09:18 job.xml
[2024-06-20 13:55:21] -rw-r--r-- 2 boincer umatlas 611120425 Jun 20 09:18 EVNT.40024038._000006.pool.root.1
[2024-06-20 13:55:21] -rw-r--r-- 2 boincer umatlas     17537 Jun 20 09:18 start_atlas.sh
[2024-06-20 13:55:21] drwxrwx--x 2 boincer umatlas      4096 Jun 20 09:18 shared
[2024-06-20 13:55:21] -rw-r--r-- 2 boincer umatlas    482473 Jun 20 09:18 input.tar.gz
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas         0 Jun 20 09:18 boinc_lockfile
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas      2482 Jun 20 09:18 pandaJob.out
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas       467 Jun 20 09:18 setup.sh.local
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas   1015545 Jun 20 09:20 agis_schedconf.cvmfs.json
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas   1321254 Jun 20 09:20 cric_ddmendpoints.json
[2024-06-20 13:55:21] drwx------ 4 boincer umatlas      4096 Jun 20 09:20 pilot3
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas 270585935 Jun 20 13:52 HITS.40024040._000051.pool.root.1
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas       531 Jun 20 13:52 boinc_task_state.xml
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas      1091 Jun 20 13:53 memory_monitor_summary.json
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas         0 Jun 20 13:54 agis_ddmendpoints.agis.ALL.json
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas    400720 Jun 20 13:54 log.40024040._000051.job.log.tgz.1
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas        95 Jun 20 13:54 pilot_heartbeat.json
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas      6387 Jun 20 13:54 init_data.xml
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas      7757 Jun 20 13:55 heartbeat.json
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas      4211 Jun 20 13:55 pilotlog.txt
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas      8192 Jun 20 13:55 boinc_mmap_file
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas        28 Jun 20 13:55 wrapper_checkpoint.txt
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas   1450115 Jun 20 13:55 log.40024040._000051.job.log.1
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas       357 Jun 20 13:55 output.list
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas       620 Jun 20 13:55 runtime_log
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas   1873920 Jun 20 13:55 result.tar.gz
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas       651 Jun 20 13:55 X96LDmuKQe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm4tkKDm0emcnn.diag
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas     11400 Jun 20 13:55 runtime_log.err
[2024-06-20 13:55:21] -rw-r--r-- 1 boincer umatlas     21897 Jun 20 13:55 stderr.txt
[2024-06-20 13:55:21] HITS file was successfully produced:
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas 270585935 Jun 20 13:52 shared/HITS.pool.root.1
[2024-06-20 13:55:21]  *** Contents of shared directory: ***
[2024-06-20 13:55:21] total 863380
[2024-06-20 13:55:21] -rw-r--r-- 2 boincer umatlas 611120425 Jun 20 09:18 ATLAS.root_0
[2024-06-20 13:55:21] -rw-r--r-- 2 boincer umatlas     17537 Jun 20 09:18 start_atlas.sh
[2024-06-20 13:55:21] -rw-r--r-- 2 boincer umatlas    482473 Jun 20 09:18 input.tar.gz
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas 270585935 Jun 20 13:52 HITS.pool.root.1
[2024-06-20 13:55:21] -rw------- 1 boincer umatlas   1873920 Jun 20 13:55 result.tar.gz
13:55:22 (89561): run_atlas exited; CPU time 48825.645851
13:55:22 (89561): called boinc_finish(0)

</stderr_txt>
]]>

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