Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:43:51 (46232): wrapper (7.7.26015): starting
08:43:51 (46232): wrapper: running run_atlas (--nthreads 8)
[2024-06-20 08:43:51] Arguments: --nthreads 8
[2024-06-20 08:43:51] Threads: 8
[2024-06-20 08:43:51] Checking for CVMFS
[2024-06-20 08:43:52] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 08:43:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 08:43:52] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 08:43:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 08:43:53] 2.11.2.0 45665 2968 98296 134088 2 479 15997152 18432001 20738 130560 0 17643404 98.908 36653323 45275 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-20 08:43:53] CVMFS is ok
[2024-06-20 08:43:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 08:43:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 08:43:53] Further information can be found at the LHC@home message board.
[2024-06-20 08:43:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 08:43:53] Checking for apptainer binary...
[2024-06-20 08:43:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 08:43:53] Running /usr/bin/apptainer --version
[2024-06-20 08:43:53] apptainer version 1.3.2-1.el7
[2024-06-20 08:43:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 08:44:09] c-212-7.aglt2.org
[2024-06-20 08:44:09] apptainer works
[2024-06-20 08:44:09] Set ATHENA_PROC_NUMBER=8
[2024-06-20 08:44:09] Set ATHENA_CORE_NUMBER=8
[2024-06-20 08:44:09] Starting ATLAS job with PandaID=6238779943
[2024-06-20 08:44:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 13:22:07]  *** The last 200 lines of the pilot log: ***
[2024-06-20 13:22:07] 2024-06-20 17:21:45,082 | INFO     | monitor loop #1220: job 0:6238779943 is in state 'finished'
[2024-06-20 13:22:07] 2024-06-20 17:21:45,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:22:07] 2024-06-20 17:21:47,589 | INFO     | monitor loop #1221: job 0:6238779943 is in state 'finished'
[2024-06-20 13:22:07] 2024-06-20 17:21:47,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,513 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-20 13:22:07] 2024-06-20 17:21:49,514 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6238779943/memory_monitor_summary.json (trf name=prmon)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,514 | INFO     | extracted standard info from prmon json
[2024-06-20 13:22:07] 2024-06-20 17:21:49,515 | INFO     | extracted standard memory fields from prmon json
[2024-06-20 13:22:07] 2024-06-20 17:21:49,515 | WARNING  | GPU info not found in prmon json
[2024-06-20 13:22:07] 2024-06-20 17:21:49,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-20 13:22:07] 2024-06-20 17:21:49,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 13:22:07] 2024-06-20 17:21:49,524 | INFO     | fitting pss+swap vs Time
[2024-06-20 13:22:07] 2024-06-20 17:21:49,528 | INFO     | model: linear, x: [1718887877.0, 1718887938.0, 1718887999.0, 1718888060.0, 1718888121.0, 1718888182.0, 1718888243.0, 1718888304.0, 1718888365.0, 1718888426.0, 1718
[2024-06-20 13:22:07] 2024-06-20 17:21:49,529 | INFO     | sum of square deviations: 5770503381.86415
[2024-06-20 13:22:07] 2024-06-20 17:21:49,530 | INFO     | sum of deviations: 453846605419.736
[2024-06-20 13:22:07] 2024-06-20 17:21:49,530 | INFO     | mean x: 1718895929.0226414
[2024-06-20 13:22:07] 2024-06-20 17:21:49,530 | INFO     | mean y: 2295040.3773584906
[2024-06-20 13:22:07] 2024-06-20 17:21:49,530 | INFO     | -- intersect: -135187831510.54317
[2024-06-20 13:22:07] 2024-06-20 17:21:49,530 | INFO     | intersect: -135187831510.54317
[2024-06-20 13:22:07] 2024-06-20 17:21:49,531 | INFO     | chi2: 16.53213706107248
[2024-06-20 13:22:07] 2024-06-20 17:21:49,531 | INFO     | model: linear, x: [1718887877.0, 1718887938.0, 1718887999.0, 1718888060.0, 1718888121.0, 1718888182.0, 1718888243.0, 1718888304.0, 1718888365.0, 1718888426.0, 1718
[2024-06-20 13:22:07] 2024-06-20 17:21:49,531 | INFO     | sum of square deviations: 5449996876.8615465
[2024-06-20 13:22:07] 2024-06-20 17:21:49,537 | INFO     | sum of deviations: 461973112840.7694
[2024-06-20 13:22:07] 2024-06-20 17:21:49,537 | INFO     | mean x: 1718895776.523077
[2024-06-20 13:22:07] 2024-06-20 17:21:49,537 | INFO     | mean y: 2298775.2884615385
[2024-06-20 13:22:07] 2024-06-20 17:21:49,537 | INFO     | -- intersect: -145701203533.2305
[2024-06-20 13:22:07] 2024-06-20 17:21:49,537 | INFO     | intersect: -145701203533.2305
[2024-06-20 13:22:07] 2024-06-20 17:21:49,538 | INFO     | chi2: 15.591213519759146
[2024-06-20 13:22:07] 2024-06-20 17:21:49,538 | INFO     | current chi2=15.591213519759146 (change=5.691481614490641 %)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,538 | INFO     | right removable region: 259
[2024-06-20 13:22:07] 2024-06-20 17:21:49,538 | INFO     | model: linear, x: [1718888182.0, 1718888243.0, 1718888304.0, 1718888365.0, 1718888426.0, 1718888487.0, 1718888548.0, 1718888609.0, 1718888670.0, 1718888731.0, 1718
[2024-06-20 13:22:07] 2024-06-20 17:21:49,538 | INFO     | sum of square deviations: 5449993216.8615465
[2024-06-20 13:22:07] 2024-06-20 17:21:49,540 | INFO     | sum of deviations: 370697826540.2773
[2024-06-20 13:22:07] 2024-06-20 17:21:49,540 | INFO     | mean x: 1718896081.523077
[2024-06-20 13:22:07] 2024-06-20 17:21:49,540 | INFO     | mean y: 2334570.703846154
[2024-06-20 13:22:07] 2024-06-20 17:21:49,540 | INFO     | -- intersect: -116913598369.8768
[2024-06-20 13:22:07] 2024-06-20 17:21:49,544 | INFO     | intersect: -116913598369.8768
[2024-06-20 13:22:07] 2024-06-20 17:21:49,544 | INFO     | chi2: 12.172550537964327
[2024-06-20 13:22:07] 2024-06-20 17:21:49,544 | INFO     | current chi2=12.172550537964327 (change=26.370374906783745 %)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,545 | INFO     | model: linear, x: [1718888487.0, 1718888548.0, 1718888609.0, 1718888670.0, 1718888731.0, 1718888792.0, 1718888853.0, 1718888914.0, 1718888975.0, 1718889036.0, 1718
[2024-06-20 13:22:07] 2024-06-20 17:21:49,545 | INFO     | sum of square deviations: 5141576301.858824
[2024-06-20 13:22:07] 2024-06-20 17:21:49,546 | INFO     | sum of deviations: 308296253816.8115
[2024-06-20 13:22:07] 2024-06-20 17:21:49,546 | INFO     | mean x: 1718896234.0235295
[2024-06-20 13:22:07] 2024-06-20 17:21:49,546 | INFO     | mean y: 2365381.031372549
[2024-06-20 13:22:07] 2024-06-20 17:21:49,546 | INFO     | -- intersect: -103065106253.62962
[2024-06-20 13:22:07] 2024-06-20 17:21:49,546 | INFO     | intersect: -103065106253.62962
[2024-06-20 13:22:07] 2024-06-20 17:21:49,547 | INFO     | chi2: 10.037377513709563
[2024-06-20 13:22:07] 2024-06-20 17:21:49,547 | INFO     | current chi2=10.037377513709563 (change=17.54088444813176 %)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,547 | INFO     | left removable region: 20
[2024-06-20 13:22:07] 2024-06-20 17:21:49,547 | INFO     | model: linear, x: [1718889097.0, 1718889158.0, 1718889219.0, 1718889280.0, 1718889341.0, 1718889402.0, 1718889463.0, 1718889524.0, 1718889585.0, 1718889646.0, 1718
[2024-06-20 13:22:07] 2024-06-20 17:21:49,547 | INFO     | sum of square deviations: 4233204317.849374
[2024-06-20 13:22:07] 2024-06-20 17:21:49,553 | INFO     | sum of deviations: 219596194822.53143
[2024-06-20 13:22:07] 2024-06-20 17:21:49,553 | INFO     | mean x: 1718896356.0251045
[2024-06-20 13:22:07] 2024-06-20 17:21:49,553 | INFO     | mean y: 2423755.7447698745
[2024-06-20 13:22:07] 2024-06-20 17:21:49,553 | INFO     | -- intersect: -89164805306.61092
[2024-06-20 13:22:07] 2024-06-20 17:21:49,553 | INFO     | intersect: -89164805306.61092
[2024-06-20 13:22:07] 2024-06-20 17:21:49,553 | INFO     | chi2: 6.631333102192806
[2024-06-20 13:22:07] 2024-06-20 17:21:49,553 | INFO     | -- intersect: -89164805306.61092
[2024-06-20 13:22:07] 2024-06-20 17:21:49,553 | INFO     | current memory leak: 51.87 B/s (using 239 data points, chi2=6.63)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,554 | INFO     | ..............................
[2024-06-20 13:22:07] 2024-06-20 17:21:49,554 | INFO     | . Timing measurements:
[2024-06-20 13:22:07] 2024-06-20 17:21:49,554 | INFO     | . get job = 0 s
[2024-06-20 13:22:07] 2024-06-20 17:21:49,554 | INFO     | . initial setup = 6 s
[2024-06-20 13:22:07] 2024-06-20 17:21:49,554 | INFO     | . payload setup = 80 s
[2024-06-20 13:22:07] 2024-06-20 17:21:49,554 | INFO     | . stage-in = 0 s
[2024-06-20 13:22:07] 2024-06-20 17:21:49,554 | INFO     | . payload execution = 16256 s
[2024-06-20 13:22:07] 2024-06-20 17:21:49,555 | INFO     | . stage-out = 4 s
[2024-06-20 13:22:07] 2024-06-20 17:21:49,555 | INFO     | . log creation = 0 s
[2024-06-20 13:22:07] 2024-06-20 17:21:49,555 | INFO     | ..............................
[2024-06-20 13:22:07] 2024-06-20 17:21:49,763 | INFO     | 
[2024-06-20 13:22:07] 2024-06-20 17:21:49,765 | INFO     | job summary report
[2024-06-20 13:22:07] 2024-06-20 17:21:49,765 | INFO     | --------------------------------------------------
[2024-06-20 13:22:07] 2024-06-20 17:21:49,765 | INFO     | PanDA job id: 6238779943
[2024-06-20 13:22:07] 2024-06-20 17:21:49,765 | INFO     | task id: 40024040
[2024-06-20 13:22:07] 2024-06-20 17:21:49,765 | INFO     | errors: (none)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,765 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 13:22:07] 2024-06-20 17:21:49,765 | INFO     | pilot state: finished 
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | transexitcode: 0
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | exeerrorcode: 0
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | exeerrordiag: 
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | exitcode: 0
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | exitmsg: OK
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | cpuconsumptiontime: 51514 s
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | nevents: 400
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | neventsw: 0
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | pid: 29561
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | pgrp: 29561
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | corecount: 8
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | event service: False
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | sizes: {0: 2385272, 1: 2386637, 2: 2386836, 13: 2386836, 23: 2386892, 34: 2386920, 45: 2387076, 56: 2387104, 57: 2387338, 66: 2387366, 16341: 2418291, 16342: 24185
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | --------------------------------------------------
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | 
[2024-06-20 13:22:07] 2024-06-20 17:21:49,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-20 13:22:07] 2024-06-20 17:21:49,946 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | job 6238779943 has completed (purged errors)
[2024-06-20 13:22:07] 2024-06-20 17:21:49,948 | INFO     | overall cleanup function is called
[2024-06-20 13:22:07] 2024-06-20 17:21:50,964 | INFO     | --- collectZombieJob: --- 10, [29561]
[2024-06-20 13:22:07] 2024-06-20 17:21:50,965 | INFO     | zombie collector waiting for pid 29561
[2024-06-20 13:22:07] 2024-06-20 17:21:50,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 13:22:07] 2024-06-20 17:21:51,971 | INFO     | collected zombie processes
[2024-06-20 13:22:07] 2024-06-20 17:21:51,971 | INFO     | will now attempt to kill all subprocesses of pid=29561
[2024-06-20 13:22:07] 2024-06-20 17:21:52,467 | INFO     | process IDs to be killed: [29561] (in reverse order)
[2024-06-20 13:22:07] 2024-06-20 17:21:53,089 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 13:22:07] 2024-06-20 17:21:53,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 13:22:07] 2024-06-20 17:21:53,113 | INFO     | did not find any defunct processes belonging to 29561
[2024-06-20 13:22:07] 2024-06-20 17:21:53,143 | INFO     | did not find any defunct processes belonging to 29561
[2024-06-20 13:22:07] 2024-06-20 17:21:53,143 | INFO     | ready for new job
[2024-06-20 13:22:07] 2024-06-20 17:21:53,143 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 13:22:07] 2024-06-20 17:21:53,145 | INFO     | *************************************
[2024-06-20 13:22:07] 2024-06-20 17:21:53,145 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 13:22:07] 2024-06-20 17:21:53,145 | INFO     | *************************************
[2024-06-20 13:22:07] 2024-06-20 17:21:53,145 | INFO     | 
[2024-06-20 13:22:07] 2024-06-20 17:21:53,154 | INFO     | architecture information:
[2024-06-20 13:22:07] 2024-06-20 17:21:53,155 | INFO     | executing command: cat /etc/os-release
[2024-06-20 13:22:07] 2024-06-20 17:21:53,172 | INFO     | cat /etc/os-release:
[2024-06-20 13:22:07] NAME="CentOS Linux"
[2024-06-20 13:22:07] VERSION="7 (Core)"
[2024-06-20 13:22:07] ID="centos"
[2024-06-20 13:22:07] ID_LIKE="rhel fedora"
[2024-06-20 13:22:07] VERSION_ID="7"
[2024-06-20 13:22:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 13:22:07] ANSI_COLOR="0;31"
[2024-06-20 13:22:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 13:22:07] HOME_URL="https://www.centos.org/"
[2024-06-20 13:22:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 13:22:07] 
[2024-06-20 13:22:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 13:22:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 13:22:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 13:22:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 13:22:07] 
[2024-06-20 13:22:07] 2024-06-20 17:21:53,172 | INFO     | *************************************
[2024-06-20 13:22:07] 2024-06-20 17:21:53,678 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-20 13:22:07] 2024-06-20 17:21:53,762 | INFO     | sufficient remaining disk space (99266592768 B)
[2024-06-20 13:22:07] 2024-06-20 17:21:53,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 13:22:07] 2024-06-20 17:21:53,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 13:22:07] 2024-06-20 17:21:53,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 13:22:07] 2024-06-20 17:21:53,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 13:22:07] 2024-06-20 17:21:53,763 | INFO     | aborting loop
[2024-06-20 13:22:07] 2024-06-20 17:21:53,766 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-20 13:22:07] 2024-06-20 17:21:53,767 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 13:22:07] 2024-06-20 17:21:53,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 13:22:07] 2024-06-20 17:21:53,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 13:22:07] 2024-06-20 17:21:53,964 | INFO     | all data control threads have been joined
[2024-06-20 13:22:07] 2024-06-20 17:21:54,378 | INFO     | all job control threads have been joined
[2024-06-20 13:22:07] 2024-06-20 17:21:54,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 13:22:07] 2024-06-20 17:21:54,768 | INFO     | [job] retrieve thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:54,771 | INFO     | [job] job monitor thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:54,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 13:22:07] 2024-06-20 17:21:54,970 | INFO     | [data] control thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,285 | INFO     | all payload control threads have been joined
[2024-06-20 13:22:07] 2024-06-20 17:21:55,384 | INFO     | [job] control thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,675 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,677 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,699 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,714 | INFO     | [data] copytool_in thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,770 | INFO     | [data] copytool_out thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,823 | INFO     | [job] queue monitor thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,983 | INFO     | [payload] validate_post thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:55,987 | INFO     | [payload] failed_post thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:56,137 | INFO     | [job] validate thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:56,210 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:56,292 | INFO     | [payload] control thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:58,650 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 13:22:07] 2024-06-20 17:21:59,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794775754560)>', '<ExcThread(monitor, started 139794206160640)>']
[2024-06-20 13:22:07] 2024-06-20 17:21:59,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 13:22:07] 2024-06-20 17:21:59,803 | INFO     | [monitor] control thread has ended
[2024-06-20 13:22:07] 2024-06-20 17:22:04,555 | INFO     | all workflow threads have been joined
[2024-06-20 13:22:07] 2024-06-20 17:22:04,556 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 13:22:07] 2024-06-20 17:22:04,556 | INFO     | traces error code: 0
[2024-06-20 13:22:07] 2024-06-20 17:22:04,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 13:22:07] 2024-06-20 17:22:05,399 [wrapper] ==== pilot stdout END ====
[2024-06-20 13:22:07] 2024-06-20 17:22:05,403 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 13:22:07] 2024-06-20 17:22:05,440 [wrapper] pilotpid: 76232
[2024-06-20 13:22:07] 2024-06-20 17:22:05,480 [wrapper] Pilot exit status: 0
[2024-06-20 13:22:07] 2024-06-20 17:22:05,719 [wrapper] pandaids: 6238779943
[2024-06-20 13:22:07] 2024-06-20 17:22:06,130 [wrapper] cleanup supervisor_pilot 68005 76233
[2024-06-20 13:22:07] 2024-06-20 17:22:06,156 [wrapper] Test setup, not cleaning
[2024-06-20 13:22:07] 2024-06-20 17:22:06,193 [wrapper] ==== wrapper stdout END ====
[2024-06-20 13:22:07] 2024-06-20 17:22:06,230 [wrapper] ==== wrapper stderr END ====
[2024-06-20 13:22:07] 2024-06-20 17:22:06,311 [wrapper] apfmon messages muted
[2024-06-20 13:22:07]  *** Error codes and diagnostics ***
[2024-06-20 13:22:07]     "exeErrorCode": 0,
[2024-06-20 13:22:07]     "exeErrorDiag": "",
[2024-06-20 13:22:07]     "pilotErrorCode": 0,
[2024-06-20 13:22:07]     "pilotErrorDiag": "",
[2024-06-20 13:22:07]  *** Listing of results directory ***
[2024-06-20 13:22:07] total 870604
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas    469766 Jun 20 01:52 pilot3.tar.gz
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas      5654 Jun 20 02:13 queuedata.json
[2024-06-20 13:22:07] -rwx------ 1 boincer umatlas     32308 Jun 20 02:13 runpilot2-wrapper.sh
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas       100 Jun 20 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 13:22:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun 20 08:43 run_atlas
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas       105 Jun 20 08:43 job.xml
[2024-06-20 13:22:07] -rw-r--r-- 2 boincer umatlas 611478259 Jun 20 08:43 EVNT.40024038._000001.pool.root.1
[2024-06-20 13:22:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 20 08:43 start_atlas.sh
[2024-06-20 13:22:07] drwxrwx--x 2 boincer umatlas      4096 Jun 20 08:43 shared
[2024-06-20 13:22:07] -rw-r--r-- 2 boincer umatlas    482471 Jun 20 08:43 input.tar.gz
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas         0 Jun 20 08:43 boinc_lockfile
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas      2476 Jun 20 08:44 pandaJob.out
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas       467 Jun 20 08:44 setup.sh.local
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas   1015545 Jun 20 08:46 agis_schedconf.cvmfs.json
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas   1321254 Jun 20 08:46 cric_ddmendpoints.json
[2024-06-20 13:22:07] drwx------ 4 boincer umatlas      4096 Jun 20 08:46 pilot3
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas      6387 Jun 20 13:18 init_data.xml
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas 272743452 Jun 20 13:19 HITS.40024040._000011.pool.root.1
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas       532 Jun 20 13:19 boinc_task_state.xml
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas      1092 Jun 20 13:20 memory_monitor_summary.json
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas         0 Jun 20 13:20 agis_ddmendpoints.agis.ALL.json
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas    416788 Jun 20 13:20 log.40024040._000011.job.log.tgz.1
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas        95 Jun 20 13:21 pilot_heartbeat.json
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas      7755 Jun 20 13:21 heartbeat.json
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas        28 Jun 20 13:22 wrapper_checkpoint.txt
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas      4334 Jun 20 13:22 pilotlog.txt
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas      8192 Jun 20 13:22 boinc_mmap_file
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas   1460256 Jun 20 13:22 log.40024040._000011.job.log.1
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas       357 Jun 20 13:22 output.list
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas       620 Jun 20 13:22 runtime_log
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas   1894400 Jun 20 13:22 result.tar.gz
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas     11400 Jun 20 13:22 runtime_log.err
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas       652 Jun 20 13:22 mQsLDmEEQe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmjtkKDmnfpnfn.diag
[2024-06-20 13:22:07] -rw-r--r-- 1 boincer umatlas     21741 Jun 20 13:22 stderr.txt
[2024-06-20 13:22:07] HITS file was successfully produced:
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas 272743452 Jun 20 13:19 shared/HITS.pool.root.1
[2024-06-20 13:22:07]  *** Contents of shared directory: ***
[2024-06-20 13:22:07] total 865852
[2024-06-20 13:22:07] -rw-r--r-- 2 boincer umatlas 611478259 Jun 20 08:43 ATLAS.root_0
[2024-06-20 13:22:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 20 08:43 start_atlas.sh
[2024-06-20 13:22:07] -rw-r--r-- 2 boincer umatlas    482471 Jun 20 08:43 input.tar.gz
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas 272743452 Jun 20 13:19 HITS.pool.root.1
[2024-06-20 13:22:07] -rw------- 1 boincer umatlas   1894400 Jun 20 13:22 result.tar.gz
13:22:09 (46232): run_atlas exited; CPU time 50016.374867
13:22:09 (46232): called boinc_finish(0)

</stderr_txt>
]]>

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