Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-20 16:51:33 (38388): Detected: vboxwrapper 26206
2024-06-20 16:51:33 (38388): Detected: BOINC client v7.24.1
2024-06-20 16:51:33 (38388): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2024-06-20 16:51:34 (38388): Successfully copied 'init_data.xml' to the shared directory.
2024-06-20 16:51:34 (38388): Create VM. (boinc_3ad054f445309f1d, slot#0)
2024-06-20 16:51:35 (38388): Setting Memory Size for VM. (4800MB)
2024-06-20 16:51:35 (38388): Setting CPU Count for VM. (3)
2024-06-20 16:51:35 (38388): Setting Chipset Options for VM.
2024-06-20 16:51:35 (38388): Setting Graphics Controller Options for VM.
2024-06-20 16:51:36 (38388): Setting Boot Options for VM.
2024-06-20 16:51:36 (38388): Setting Network Configuration for NAT.
2024-06-20 16:51:36 (38388): Enabling VM Network Access.
2024-06-20 16:51:36 (38388): Disabling USB Support for VM.
2024-06-20 16:51:37 (38388): Disabling COM Port Support for VM.
2024-06-20 16:51:37 (38388): Disabling LPT Port Support for VM.
2024-06-20 16:51:37 (38388): Disabling Audio Support for VM.
2024-06-20 16:51:37 (38388): Disabling Clipboard Support for VM.
2024-06-20 16:51:38 (38388): Disabling Drag and Drop Support for VM.
2024-06-20 16:51:38 (38388): Adding storage controller(s) to VM.
2024-06-20 16:51:38 (38388): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-20 16:51:39 (38388): Adding VirtualBox Guest Additions to VM.
2024-06-20 16:51:39 (38388): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-20 16:51:39 (38388): forwarding host port 52804 to guest port 80
2024-06-20 16:51:40 (38388): Enabling remote desktop for VM.
2024-06-20 16:51:40 (38388): Enabling shared directory for VM.
2024-06-20 16:51:41 (38388): Starting VM using VBoxManage interface. (boinc_3ad054f445309f1d, slot#0)
2024-06-20 16:51:46 (38388): Successfully started VM. (PID = '25860')
2024-06-20 16:51:46 (38388): Reporting VM Process ID to BOINC.
2024-06-20 16:51:46 (38388): Guest Log: BIOS: VirtualBox 7.0.6
2024-06-20 16:51:46 (38388): Guest Log: CPUID EDX: 0x178bfbff
2024-06-20 16:51:46 (38388): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-20 16:51:46 (38388): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-20 16:51:46 (38388): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-20 16:51:46 (38388): Detected: Web Application Enabled (http://localhost:52804)
2024-06-20 16:51:46 (38388): Detected: Remote Desktop Enabled (localhost:52805)
2024-06-20 16:51:46 (38388): Preference change detected
2024-06-20 16:51:46 (38388): Setting CPU throttle for VM. (100%)
2024-06-20 16:51:46 (38388): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-20 16:51:48 (38388): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-20 16:51:48 (38388): Guest Log: BIOS: Booting from Hard Disk...
2024-06-20 16:51:51 (38388): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-20 16:51:51 (38388): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-20 16:51:51 (38388): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-20 16:52:44 (38388): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-20 16:52:44 (38388): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-20 16:52:48 (38388): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-20 16:52:48 (38388): Guest Log: 00:00:00.000124 main     Log opened 2024-06-20T16:52:46.373507000Z
2024-06-20 16:52:48 (38388): Guest Log: 00:00:00.000200 main     OS Product: Linux
2024-06-20 16:52:48 (38388): Guest Log: 00:00:00.000222 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-20 16:52:48 (38388): Guest Log: 00:00:00.000238 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-20 16:52:48 (38388): Guest Log: 00:00:00.000253 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-20 16:52:48 (38388): Guest Log: 00:00:00.000253 main     Process ID: 1296
2024-06-20 16:52:48 (38388): Guest Log: 00:00:00.000253 main     Package type: LINUX_64BITS_GENERIC
2024-06-20 16:52:48 (38388): Guest Log: 00:00:00.000884 main     5.2.32 r132073 started. Verbose level = 0
2024-06-20 16:52:48 (38388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-20 16:52:48 (38388): Guest Log: [INFO] Mounting shared directory
2024-06-20 16:52:48 (38388): Guest Log: [INFO] Checking for init_data.xml
2024-06-20 16:52:53 (38388): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-20 16:52:53 (38388): Guest Log: [INFO] Detected branch: prod
2024-06-20 16:52:53 (38388): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-20 16:52:53 (38388): Guest Log: Copying input files
2024-06-20 16:52:56 (38388): Guest Log: Copied input files into RunAtlas.
2024-06-20 16:52:56 (38388): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2024-06-20 16:52:58 (38388): Guest Log: 00:00:10.002774 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 238 365 824 000ns (GuestNow=1 718 895 128 009 642 000 ns GuestLast=1 718 902 366 375 466 000 ns fSetTimeLastLoop=true )
2024-06-20 16:53:06 (38388): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-20 16:53:06 (38388): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-20 16:53:06 (38388): Guest Log: 2.6.3.0 1571 0 29616 134088 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2024-06-20 16:53:07 (38388): Guest Log: copied the webapp to /var/www
2024-06-20 16:53:07 (38388): Guest Log: ATHENA_PROC_NUMBER=3
2024-06-20 16:53:07 (38388): Guest Log: ATHENA_CORE_NUMBER=3
2024-06-20 16:53:07 (38388): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-20 16:53:07 (38388): Guest Log:  *** Starting ATLAS job. (PandaID=6238490042 taskID=38920987) ***
2024-06-20 18:31:48 (38388): Status Report: Elapsed Time: '6000.000000'
2024-06-20 18:31:48 (38388): Status Report: CPU Time: '15980.125000'
2024-06-20 20:11:51 (38388): Status Report: Elapsed Time: '12000.000000'
2024-06-20 20:11:51 (38388): Status Report: CPU Time: '33929.375000'
2024-06-20 21:51:54 (38388): Status Report: Elapsed Time: '18000.000000'
2024-06-20 21:51:54 (38388): Status Report: CPU Time: '51876.437500'
2024-06-20 22:12:03 (38388): VM state change detected. (old = 'running', new = 'paused')
2024-06-20 22:12:24 (38388): VM state change detected. (old = 'paused', new = 'running')
2024-06-20 23:32:20 (38388): Status Report: Elapsed Time: '24000.000000'
2024-06-20 23:32:20 (38388): Status Report: CPU Time: '69820.953125'
2024-06-21 01:12:22 (38388): Status Report: Elapsed Time: '30000.000000'
2024-06-21 01:12:22 (38388): Status Report: CPU Time: '87767.890625'
2024-06-21 01:26:09 (38388): Guest Log:  *** Job finished ***
2024-06-21 01:26:09 (38388): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:24:59,502 | INFO     | [data] copytool_out thread has finished
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:00,090 | INFO     | [job] queue monitor thread has finished
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:00,633 | INFO     | [data] queue_monitor thread has finished
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:01,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281737975616)>', '<ExcThread(monitor, started 140280846071552)>']
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:01,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:01,697 | INFO     | [monitor] control thread has ended
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,261 | INFO     | all workflow threads have been joined
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,261 | INFO     | end of generic workflow (traces error code: 0)
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,262 | INFO     | traces error code: 0
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,352 [wrapper] ==== pilot stdout END ====
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,356 [wrapper] ==== wrapper stdout RESUME ====
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,359 [wrapper] pilotpid: 6449
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,362 [wrapper] Pilot exit status: 0
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,424 [wrapper] pandaids: 6238490042
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,449 [wrapper] cleanup supervisor_pilot 13964 6450
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,453 [wrapper] Test setup, not cleaning
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,457 [wrapper] ==== wrapper stdout END ====
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,460 [wrapper] ==== wrapper stderr END ====
2024-06-21 01:26:09 (38388): Guest Log: 2024-06-20 23:25:06,466 [wrapper] apfmon messages muted
2024-06-21 01:26:09 (38388): Guest Log:  *** Error codes and diagnostics ***
2024-06-21 01:26:09 (38388): Guest Log:     "exeErrorCode": 0,
2024-06-21 01:26:09 (38388): Guest Log:     "exeErrorDiag": "",
2024-06-21 01:26:09 (38388): Guest Log:     "pilotErrorCode": 0,
2024-06-21 01:26:09 (38388): Guest Log:     "pilotErrorDiag": "",
2024-06-21 01:26:09 (38388): Guest Log:  *** Listing of results directory ***
2024-06-21 01:26:09 (38388): Guest Log: total 343284
2024-06-21 01:26:09 (38388): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 19 23:25 pilot3.tar.gz
2024-06-21 01:26:09 (38388): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 20 00:10 queuedata.json
2024-06-21 01:26:09 (38388): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 20 00:12 runpilot2-wrapper.sh
2024-06-21 01:26:09 (38388): Guest Log: -rwxr-xr-x. 1 atlas atlas      9043 Jun 20 14:52 init_data.xml
2024-06-21 01:26:09 (38388): Guest Log: -rwxr-xr-x. 1 atlas atlas    482530 Jun 20 14:52 input.tar.gz
2024-06-21 01:26:09 (38388): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 20 14:52 start_atlas.sh
2024-06-21 01:26:09 (38388): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 20 14:52 EVNT.38776170._000667.pool.root.1 -> /data/./ATLAS.root_0
2024-06-21 01:26:09 (38388): Guest Log: -rw-r--r--. 1 atlas atlas      2618 Jun 20 14:52 pandaJob.out
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas       459 Jun 20 14:52 setup.sh.local
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas   1015545 Jun 20 14:53 agis_schedconf.cvmfs.json
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas   1321254 Jun 20 14:53 cric_ddmendpoints.json
2024-06-21 01:26:09 (38388): Guest Log: drwx------. 4 atlas atlas      4096 Jun 20 14:53 pilot3
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas        95 Jun 20 23:24 pilot_heartbeat.json
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas 341161788 Jun 20 23:24 HITS.38920987._059332.pool.root.1
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas      1028 Jun 20 23:24 memory_monitor_summary.json
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas         0 Jun 20 23:24 agis_ddmendpoints.agis.ALL.json
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas    471123 Jun 20 23:24 log.38920987._059332.job.log.tgz.1
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas      7736 Jun 20 23:24 heartbeat.json
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas      4394 Jun 20 23:25 pilotlog.txt
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas   2980438 Jun 20 23:25 log.38920987._059332.job.log.1
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas       357 Jun 20 23:25 output.list
2024-06-21 01:26:09 (38388): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 20 23:25 runtime_log
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas   3471360 Jun 20 23:25 result.tar.gz
2024-06-21 01:26:09 (38388): Guest Log: -rw-r--r--. 1 atlas atlas     11291 Jun 20 23:25 runtime_log.err
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas       649 Jun 20 23:25 3pqNDmWaKe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmfckKDmCONCSo.diag
2024-06-21 01:26:09 (38388): Guest Log: Looking for outputfile HITS.38920987._059332.pool.root.1
2024-06-21 01:26:09 (38388): Guest Log: HITS file was successfully produced
2024-06-21 01:26:09 (38388): Guest Log: -rw-------. 1 atlas atlas 341161788 Jun 20 23:24 /home/atlas/RunAtlas/HITS.38920987._059332.pool.root.1
2024-06-21 01:26:10 (38388): Guest Log: Successfully finished the ATLAS job!
2024-06-21 01:26:10 (38388): Guest Log: Copying the results back to the shared directory!
2024-06-21 01:26:10 (38388): Guest Log:  *** Contents of shared directory: ***
2024-06-21 01:26:10 (38388): Guest Log: total 963204
2024-06-21 01:26:10 (38388): Guest Log: -rwxrwxrwx. 1 root root 641164091 Jun 20 14:51 ATLAS.root_0
2024-06-21 01:26:10 (38388): Guest Log: -rwxrwxrwx. 1 root root 341161788 Jun 20  2024 HITS.pool.root.1
2024-06-21 01:26:10 (38388): Guest Log: -rwxrwxrwx. 1 root root      9043 Jun 20 14:51 init_data.xml
2024-06-21 01:26:10 (38388): Guest Log: -rwxrwxrwx. 1 root root    482530 Jun 20 07:02 input.tar.gz
2024-06-21 01:26:10 (38388): Guest Log: -rwxrwxrwx. 1 root root   3471360 Jun 20  2024 result.tar.gz
2024-06-21 01:26:10 (38388): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 20 07:02 start_atlas.sh
2024-06-21 01:26:10 (38388): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-21 01:26:10 (38388): VM Completion File Detected.
2024-06-21 01:26:10 (38388): Powering off VM.
2024-06-21 01:26:10 (38388): Successfully stopped VM.
2024-06-21 01:26:10 (38388): Deregistering VM. (boinc_3ad054f445309f1d, slot#0)
2024-06-21 01:26:10 (38388): Removing network bandwidth throttle group from VM.
2024-06-21 01:26:11 (38388): Removing VM from VirtualBox.
01:26:16 (38388): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN