Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
21:31:49 (60875): wrapper (7.7.26015): starting
21:31:49 (60875): wrapper: running run_atlas (--nthreads 12)
[2024-06-20 21:31:49] Arguments: --nthreads 12
[2024-06-20 21:31:49] Threads: 12
[2024-06-20 21:31:49] Checking for CVMFS
[2024-06-20 21:31:49] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 21:31:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 21:31:49] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 21:31:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 21:31:49] 2.10.1.0 196204 233402 138432 134113 3 149 30573542 45568000 6600 130560 0 729359478 99.762 478921414 3014 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-20 21:31:49] CVMFS is ok
[2024-06-20 21:31:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 21:31:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 21:31:49] Further information can be found at the LHC@home message board.
[2024-06-20 21:31:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 21:31:49] Checking for apptainer binary...
[2024-06-20 21:31:49] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 21:31:49] Running /usr/bin/apptainer --version
[2024-06-20 21:31:49] apptainer version 1.3.2-1.el7
[2024-06-20 21:31:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 21:31:51] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0032.triumf.lcg
[2024-06-20 21:31:51] apptainer works
[2024-06-20 21:31:51] Set ATHENA_PROC_NUMBER=12
[2024-06-20 21:31:51] Set ATHENA_CORE_NUMBER=12
[2024-06-20 21:31:51] Starting ATLAS job with PandaID=6238445642
[2024-06-20 21:31:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 01:52:45]  *** The last 200 lines of the pilot log: ***
[2024-06-21 01:52:45] 2024-06-21 08:52:26,944 | INFO     | chi2: 6.42531414466386
[2024-06-21 01:52:45] 2024-06-21 08:52:26,944 | INFO     | model: linear, x: [1718944341.0, 1718944402.0, 1718944463.0, 1718944524.0, 1718944585.0, 1718944646.0, 1718944707.0, 1718944768.0, 1718944829.0, 1718944892.0, 1718
[2024-06-21 01:52:45] 2024-06-21 08:52:26,944 | INFO     | sum of square deviations: 4902665608.98011
[2024-06-21 01:52:45] 2024-06-21 08:52:26,945 | INFO     | sum of deviations: 141697926027.9563
[2024-06-21 01:52:45] 2024-06-21 08:52:26,945 | INFO     | mean x: 1718951966.936255
[2024-06-21 01:52:45] 2024-06-21 08:52:26,945 | INFO     | mean y: 2677764.059760956
[2024-06-21 01:52:45] 2024-06-21 08:52:26,945 | INFO     | -- intersect: -49678852261.238686
[2024-06-21 01:52:45] 2024-06-21 08:52:26,945 | INFO     | intersect: -49678852261.238686
[2024-06-21 01:52:45] 2024-06-21 08:52:26,945 | INFO     | chi2: 5.600790179628854
[2024-06-21 01:52:45] 2024-06-21 08:52:26,945 | INFO     | current chi2=5.600790179628854 (change=12.832430391279193 %)
[2024-06-21 01:52:45] 2024-06-21 08:52:26,945 | INFO     | right removable region: 250
[2024-06-21 01:52:45] 2024-06-21 08:52:26,946 | INFO     | model: linear, x: [1718944646.0, 1718944707.0, 1718944768.0, 1718944829.0, 1718944892.0, 1718944951.0, 1718945012.0, 1718945073.0, 1718945134.0, 1718945195.0, 1718
[2024-06-21 01:52:45] 2024-06-21 08:52:26,946 | INFO     | sum of square deviations: 4902522258.98011
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | sum of deviations: 52846347954.51792
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | mean x: 1718952271.936255
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | mean y: 2705988.657370518
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | -- intersect: -18526603024.38325
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | intersect: -18526603024.38325
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | chi2: 3.6750451810641405
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | current chi2=3.6750451810641405 (change=42.803649777712145 %)
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | model: linear, x: [1718944951.0, 1718945012.0, 1718945073.0, 1718945134.0, 1718945195.0, 1718945256.0, 1718945317.0, 1718945378.0, 1718945439.0, 1718945500.0, 1718
[2024-06-21 01:52:45] 2024-06-21 08:52:26,947 | INFO     | sum of square deviations: 4615247420.813038
[2024-06-21 01:52:45] 2024-06-21 08:52:26,948 | INFO     | sum of deviations: -2996827555.804884
[2024-06-21 01:52:45] 2024-06-21 08:52:26,948 | INFO     | mean x: 1718952424.4471545
[2024-06-21 01:52:45] 2024-06-21 08:52:26,948 | INFO     | mean y: 2735634.7073170734
[2024-06-21 01:52:45] 2024-06-21 08:52:26,948 | INFO     | -- intersect: 1118906345.181027
[2024-06-21 01:52:45] 2024-06-21 08:52:26,948 | INFO     | intersect: 1118906345.181027
[2024-06-21 01:52:45] 2024-06-21 08:52:26,949 | INFO     | chi2: 2.1202555435904675
[2024-06-21 01:52:45] 2024-06-21 08:52:26,949 | INFO     | current chi2=2.1202555435904675 (change=42.30668089428687 %)
[2024-06-21 01:52:45] 2024-06-21 08:52:26,949 | INFO     | model: linear, x: [1718945256.0, 1718945317.0, 1718945378.0, 1718945439.0, 1718945500.0, 1718945561.0, 1718945622.0, 1718945683.0, 1718945744.0, 1718945805.0, 1718
[2024-06-21 01:52:45] 2024-06-21 08:52:26,949 | INFO     | sum of square deviations: 4339385133.734453
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | sum of deviations: -45040497451.730286
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | mean x: 1718952576.966805
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | mean y: 2758790.908713693
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | -- intersect: 17844567428.873325
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | intersect: 17844567428.873325
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | chi2: 1.1068822229400876
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | current chi2=1.1068822229400876 (change=47.794867166545444 %)
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | model: linear, x: [1718945561.0, 1718945622.0, 1718945683.0, 1718945744.0, 1718945805.0, 1718945866.0, 1718945927.0, 1718945988.0, 1718946049.0, 1718946110.0, 1718
[2024-06-21 01:52:45] 2024-06-21 08:52:26,950 | INFO     | sum of square deviations: 4074732358.96186
[2024-06-21 01:52:45] 2024-06-21 08:52:26,951 | INFO     | sum of deviations: -50470208823.01697
[2024-06-21 01:52:45] 2024-06-21 08:52:26,951 | INFO     | mean x: 1718952729.4872882
[2024-06-21 01:52:45] 2024-06-21 08:52:26,951 | INFO     | mean y: 2761869.661016949
[2024-06-21 01:52:45] 2024-06-21 08:52:26,951 | INFO     | -- intersect: 21293952448.91704
[2024-06-21 01:52:45] 2024-06-21 08:52:26,951 | INFO     | intersect: 21293952448.91704
[2024-06-21 01:52:45] 2024-06-21 08:52:26,952 | INFO     | chi2: 1.0449312821803325
[2024-06-21 01:52:45] 2024-06-21 08:52:26,952 | INFO     | current chi2=1.0449312821803325 (change=5.5968864144553505 %)
[2024-06-21 01:52:45] 2024-06-21 08:52:26,952 | INFO     | left removable region: 40
[2024-06-21 01:52:45] 2024-06-21 08:52:26,952 | INFO     | model: linear, x: [1718946782.0, 1718946843.0, 1718946903.0, 1718946965.0, 1718947025.0, 1718947087.0, 1718947152.0, 1718947214.0, 1718947270.0, 1718947334.0, 1718
[2024-06-21 01:52:45] 2024-06-21 08:52:26,952 | INFO     | sum of square deviations: 2870486891.1238136
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | sum of deviations: 2018866591.3047628
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | mean x: 1718953156.5809524
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | mean y: 2750239.276190476
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | -- intersect: -1206221350.3764942
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | intersect: -1206221350.3764942
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | chi2: 0.03420263410209542
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | -- intersect: -1206221350.3764942
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | current memory leak: 0.70 B/s (using 210 data points, chi2=0.03)
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | ..............................
[2024-06-21 01:52:45] 2024-06-21 08:52:26,953 | INFO     | . Timing measurements:
[2024-06-21 01:52:45] 2024-06-21 08:52:26,954 | INFO     | . get job = 0 s
[2024-06-21 01:52:45] 2024-06-21 08:52:26,954 | INFO     | . initial setup = 2 s
[2024-06-21 01:52:45] 2024-06-21 08:52:26,954 | INFO     | . payload setup = 4 s
[2024-06-21 01:52:45] 2024-06-21 08:52:26,954 | INFO     | . stage-in = 0 s
[2024-06-21 01:52:45] 2024-06-21 08:52:26,954 | INFO     | . payload execution = 15592 s
[2024-06-21 01:52:45] 2024-06-21 08:52:26,954 | INFO     | . stage-out = 2 s
[2024-06-21 01:52:45] 2024-06-21 08:52:26,954 | INFO     | . log creation = 0 s
[2024-06-21 01:52:45] 2024-06-21 08:52:26,954 | INFO     | ..............................
[2024-06-21 01:52:45] 2024-06-21 08:52:27,002 | INFO     | 
[2024-06-21 01:52:45] 2024-06-21 08:52:27,003 | INFO     | job summary report
[2024-06-21 01:52:45] 2024-06-21 08:52:27,003 | INFO     | --------------------------------------------------
[2024-06-21 01:52:45] 2024-06-21 08:52:27,003 | INFO     | PanDA job id: 6238445642
[2024-06-21 01:52:45] 2024-06-21 08:52:27,003 | INFO     | task id: 38921007
[2024-06-21 01:52:45] 2024-06-21 08:52:27,003 | INFO     | errors: (none)
[2024-06-21 01:52:45] 2024-06-21 08:52:27,003 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 01:52:45] 2024-06-21 08:52:27,003 | INFO     | pilot state: finished 
[2024-06-21 01:52:45] 2024-06-21 08:52:27,003 | INFO     | transexitcode: 0
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | exeerrorcode: 0
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | exeerrordiag: 
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | exitcode: 0
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | exitmsg: OK
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | cpuconsumptiontime: 92690 s
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | nevents: 400
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | neventsw: 0
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | pid: 82354
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | pgrp: 82354
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | corecount: 12
[2024-06-21 01:52:45] 2024-06-21 08:52:27,004 | INFO     | event service: False
[2024-06-21 01:52:45] 2024-06-21 08:52:27,005 | INFO     | sizes: {0: 2387110, 3: 2387316, 11: 2387344, 15600: 2418320, 15603: 2427330, 15613: 2427444}
[2024-06-21 01:52:45] 2024-06-21 08:52:27,005 | INFO     | --------------------------------------------------
[2024-06-21 01:52:45] 2024-06-21 08:52:27,005 | INFO     | 
[2024-06-21 01:52:45] 2024-06-21 08:52:27,005 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-21 01:52:45] 2024-06-21 08:52:27,033 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,033 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,033 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,033 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,035 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 01:52:45] 2024-06-21 08:52:27,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,035 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 01:52:45] 2024-06-21 08:52:27,035 | INFO     | job 6238445642 has completed (purged errors)
[2024-06-21 01:52:45] 2024-06-21 08:52:27,035 | INFO     | overall cleanup function is called
[2024-06-21 01:52:45] 2024-06-21 08:52:28,044 | INFO     | --- collectZombieJob: --- 10, [82354]
[2024-06-21 01:52:45] 2024-06-21 08:52:28,044 | INFO     | zombie collector waiting for pid 82354
[2024-06-21 01:52:45] 2024-06-21 08:52:28,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 01:52:45] 2024-06-21 08:52:29,046 | INFO     | collected zombie processes
[2024-06-21 01:52:45] 2024-06-21 08:52:29,047 | INFO     | will now attempt to kill all subprocesses of pid=82354
[2024-06-21 01:52:45] 2024-06-21 08:52:29,154 | INFO     | process IDs to be killed: [82354] (in reverse order)
[2024-06-21 01:52:45] 2024-06-21 08:52:29,241 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 01:52:45] 2024-06-21 08:52:29,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 01:52:45] 2024-06-21 08:52:29,248 | INFO     | did not find any defunct processes belonging to 82354
[2024-06-21 01:52:45] 2024-06-21 08:52:29,254 | INFO     | did not find any defunct processes belonging to 82354
[2024-06-21 01:52:45] 2024-06-21 08:52:29,254 | INFO     | ready for new job
[2024-06-21 01:52:45] 2024-06-21 08:52:29,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 01:52:45] 2024-06-21 08:52:29,257 | INFO     | *************************************
[2024-06-21 01:52:45] 2024-06-21 08:52:29,257 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 01:52:45] 2024-06-21 08:52:29,258 | INFO     | *************************************
[2024-06-21 01:52:45] 2024-06-21 08:52:29,258 | INFO     | 
[2024-06-21 01:52:45] 2024-06-21 08:52:29,262 | INFO     | architecture information:
[2024-06-21 01:52:45] 2024-06-21 08:52:29,262 | INFO     | executing command: cat /etc/os-release
[2024-06-21 01:52:45] 2024-06-21 08:52:29,283 | INFO     | cat /etc/os-release:
[2024-06-21 01:52:45] NAME="CentOS Linux"
[2024-06-21 01:52:45] VERSION="7 (Core)"
[2024-06-21 01:52:45] ID="centos"
[2024-06-21 01:52:45] ID_LIKE="rhel fedora"
[2024-06-21 01:52:45] VERSION_ID="7"
[2024-06-21 01:52:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 01:52:45] ANSI_COLOR="0;31"
[2024-06-21 01:52:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 01:52:45] HOME_URL="https://www.centos.org/"
[2024-06-21 01:52:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 01:52:45] 
[2024-06-21 01:52:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 01:52:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 01:52:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 01:52:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 01:52:45] 
[2024-06-21 01:52:45] 2024-06-21 08:52:29,284 | INFO     | *************************************
[2024-06-21 01:52:45] 2024-06-21 08:52:29,785 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-21 01:52:45] 2024-06-21 08:52:29,807 | INFO     | sufficient remaining disk space (2034427232256 B)
[2024-06-21 01:52:45] 2024-06-21 08:52:29,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 01:52:45] 2024-06-21 08:52:29,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 01:52:45] 2024-06-21 08:52:29,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 01:52:45] 2024-06-21 08:52:29,816 | INFO     | all data control threads have been joined
[2024-06-21 01:52:45] 2024-06-21 08:52:30,069 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 01:52:45] 2024-06-21 08:52:30,070 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 01:52:45] 2024-06-21 08:52:30,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 01:52:45] 2024-06-21 08:52:30,070 | INFO     | will abort loop
[2024-06-21 01:52:45] 2024-06-21 08:52:30,807 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 01:52:45] 2024-06-21 08:52:30,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 01:52:45] 2024-06-21 08:52:30,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 01:52:45] 2024-06-21 08:52:30,811 | INFO     | [job] retrieve thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:30,822 | INFO     | [data] control thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:30,856 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:30,938 | INFO     | all payload control threads have been joined
[2024-06-21 01:52:45] 2024-06-21 08:52:30,945 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:30,991 | INFO     | [payload] failed_post thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:31,037 | INFO     | all job control threads have been joined
[2024-06-21 01:52:45] 2024-06-21 08:52:31,071 | INFO     | [job] job monitor thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:31,755 | INFO     | [data] copytool_in thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:31,814 | INFO     | [data] copytool_out thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:31,900 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:31,943 | INFO     | [payload] control thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:32,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 01:52:45] 2024-06-21 08:52:32,038 | INFO     | [job] control thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:32,053 | INFO     | [payload] validate_post thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:32,084 | INFO     | [job] validate thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:32,131 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:32,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 01:52:45] 2024-06-21 08:52:33,020 | INFO     | [job] queue monitor thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:36,311 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 01:52:45] 2024-06-21 08:52:38,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213577901888)>', '<ExcThread(monitor, started 140212621534976)>']
[2024-06-21 01:52:45] 2024-06-21 08:52:38,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 01:52:45] 2024-06-21 08:52:38,850 | INFO     | [monitor] control thread has ended
[2024-06-21 01:52:45] 2024-06-21 08:52:43,177 | INFO     | all workflow threads have been joined
[2024-06-21 01:52:45] 2024-06-21 08:52:43,177 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 01:52:45] 2024-06-21 08:52:43,178 | INFO     | traces error code: 0
[2024-06-21 01:52:45] 2024-06-21 08:52:43,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 01:52:45] 2024-06-21 08:52:43,325 [wrapper] ==== pilot stdout END ====
[2024-06-21 01:52:45] 2024-06-21 08:52:43,329 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 01:52:45] 2024-06-21 08:52:43,332 [wrapper] pilotpid: 68627
[2024-06-21 01:52:45] 2024-06-21 08:52:43,336 [wrapper] Pilot exit status: 0
[2024-06-21 01:52:45] 2024-06-21 08:52:43,347 [wrapper] pandaids: 6238445642
[2024-06-21 01:52:45] 2024-06-21 08:52:43,382 [wrapper] cleanup supervisor_pilot   1612 68628
[2024-06-21 01:52:45] 2024-06-21 08:52:43,387 [wrapper] Test setup, not cleaning
[2024-06-21 01:52:45] 2024-06-21 08:52:43,389 [wrapper] ==== wrapper stdout END ====
[2024-06-21 01:52:45] 2024-06-21 08:52:43,391 [wrapper] ==== wrapper stderr END ====
[2024-06-21 01:52:45] 2024-06-21 08:52:43,395 [wrapper] apfmon messages muted
[2024-06-21 01:52:45]  *** Error codes and diagnostics ***
[2024-06-21 01:52:45]     "exeErrorCode": 0,
[2024-06-21 01:52:45]     "exeErrorDiag": "",
[2024-06-21 01:52:45]     "pilotErrorCode": 0,
[2024-06-21 01:52:45]     "pilotErrorDiag": "",
[2024-06-21 01:52:45]  *** Listing of results directory ***
[2024-06-21 01:52:45] total 917848
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc      5654 Jun 19 16:25 queuedata.json
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc    469766 Jun 19 16:25 pilot3.tar.gz
[2024-06-21 01:52:45] -rwx------ 1 boinc boinc     32308 Jun 19 16:25 runpilot2-wrapper.sh
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc       100 Jun 20 21:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 01:52:45] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 21:31 run_atlas
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc       105 Jun 20 21:31 job.xml
[2024-06-21 01:52:45] -rw-r--r-- 2 boinc boinc 582538395 Jun 20 21:31 EVNT.38776201._000533.pool.root.1
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc      6628 Jun 20 21:31 init_data.xml
[2024-06-21 01:52:45] -rw-r--r-- 2 boinc boinc     17537 Jun 20 21:31 start_atlas.sh
[2024-06-21 01:52:45] drwxrwx--x 2 boinc boinc      4096 Jun 20 21:31 shared
[2024-06-21 01:52:45] -rw-r--r-- 2 boinc boinc    482528 Jun 20 21:31 input.tar.gz
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc         0 Jun 20 21:31 boinc_lockfile
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc      2628 Jun 20 21:31 pandaJob.out
[2024-06-21 01:52:45] -rw------- 1 boinc boinc       424 Jun 20 21:31 setup.sh.local
[2024-06-21 01:52:45] -rw------- 1 boinc boinc   1024123 Jun 20 21:31 agis_schedconf.cvmfs.json
[2024-06-21 01:52:45] -rw------- 1 boinc boinc   1321251 Jun 20 21:31 cric_ddmendpoints.json
[2024-06-21 01:52:45] drwx------ 4 boinc boinc      4096 Jun 20 21:31 pilot3
[2024-06-21 01:52:45] -rw------- 1 boinc boinc 349925120 Jun 21 01:51 HITS.38921007._050456.pool.root.1
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc       532 Jun 21 01:52 boinc_task_state.xml
[2024-06-21 01:52:45] -rw------- 1 boinc boinc        95 Jun 21 01:52 pilot_heartbeat.json
[2024-06-21 01:52:45] -rw------- 1 boinc boinc      1062 Jun 21 01:52 memory_monitor_summary.json
[2024-06-21 01:52:45] -rw------- 1 boinc boinc         0 Jun 21 01:52 agis_ddmendpoints.agis.ALL.json
[2024-06-21 01:52:45] -rw------- 1 boinc boinc    460388 Jun 21 01:52 log.38921007._050456.job.log.tgz.1
[2024-06-21 01:52:45] -rw------- 1 boinc boinc      7790 Jun 21 01:52 heartbeat.json
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc      8192 Jun 21 01:52 boinc_mmap_file
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc        28 Jun 21 01:52 wrapper_checkpoint.txt
[2024-06-21 01:52:45] -rw------- 1 boinc boinc      4396 Jun 21 01:52 pilotlog.txt
[2024-06-21 01:52:45] -rw------- 1 boinc boinc   1477731 Jun 21 01:52 log.38921007._050456.job.log.1
[2024-06-21 01:52:45] -rw------- 1 boinc boinc       357 Jun 21 01:52 output.list
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc       620 Jun 21 01:52 runtime_log
[2024-06-21 01:52:45] -rw------- 1 boinc boinc   1955840 Jun 21 01:52 result.tar.gz
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc     11287 Jun 21 01:52 runtime_log.err
[2024-06-21 01:52:45] -rw------- 1 boinc boinc       659 Jun 21 01:52 OQ7NDmMrJe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm9ZkKDmfYbD3n.diag
[2024-06-21 01:52:45] -rw-r--r-- 1 boinc boinc     21889 Jun 21 01:52 stderr.txt
[2024-06-21 01:52:45] HITS file was successfully produced:
[2024-06-21 01:52:45] -rw------- 1 boinc boinc 349925120 Jun 21 01:51 shared/HITS.pool.root.1
[2024-06-21 01:52:45]  *** Contents of shared directory: ***
[2024-06-21 01:52:45] total 913024
[2024-06-21 01:52:45] -rw-r--r-- 2 boinc boinc 582538395 Jun 20 21:31 ATLAS.root_0
[2024-06-21 01:52:45] -rw-r--r-- 2 boinc boinc     17537 Jun 20 21:31 start_atlas.sh
[2024-06-21 01:52:45] -rw-r--r-- 2 boinc boinc    482528 Jun 20 21:31 input.tar.gz
[2024-06-21 01:52:45] -rw------- 1 boinc boinc 349925120 Jun 21 01:51 HITS.pool.root.1
[2024-06-21 01:52:45] -rw------- 1 boinc boinc   1955840 Jun 21 01:52 result.tar.gz
01:52:47 (60875): run_atlas exited; CPU time 92361.817323
01:52:47 (60875): called boinc_finish(0)

</stderr_txt>
]]>

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