Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:01:30 (107758): wrapper (7.7.26015): starting
20:01:30 (107758): wrapper: running run_atlas (--nthreads 12)
[2024-06-20 20:01:30] Arguments: --nthreads 12
[2024-06-20 20:01:30] Threads: 12
[2024-06-20 20:01:30] Checking for CVMFS
[2024-06-20 20:01:31] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 20:01:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 20:01:31] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 20:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 20:01:31] 2.10.1.0 173791 233309 116872 134110 3 351 29569326 45568001 11958 130560 0 1443421732 99.757 924713101 16459 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-20 20:01:31] CVMFS is ok
[2024-06-20 20:01:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 20:01:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 20:01:31] Further information can be found at the LHC@home message board.
[2024-06-20 20:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 20:01:31] Checking for apptainer binary...
[2024-06-20 20:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 20:01:31] Running /usr/bin/apptainer --version
[2024-06-20 20:01:31] apptainer version 1.3.2-1.el7
[2024-06-20 20:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 20:01:32] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0045.triumf.lcg
[2024-06-20 20:01:32] apptainer works
[2024-06-20 20:01:32] Set ATHENA_PROC_NUMBER=12
[2024-06-20 20:01:32] Set ATHENA_CORE_NUMBER=12
[2024-06-20 20:01:32] Starting ATLAS job with PandaID=6238896254
[2024-06-20 20:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 03:03:19]  *** The last 200 lines of the pilot log: ***
[2024-06-21 03:03:19] 2024-06-21 10:02:54,764 | WARNING  | process 119065 is no longer using CPU - aborting
[2024-06-21 03:03:19] 2024-06-21 10:02:57,270 | INFO     | monitor loop #1807: job 0:6238896254 is in state 'finished'
[2024-06-21 03:03:19] 2024-06-21 10:02:57,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 03:03:19] 2024-06-21 10:02:57,841 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-21 03:03:19] 2024-06-21 10:02:57,940 | INFO     | job 6238896254 has state=finished
[2024-06-21 03:03:19] 2024-06-21 10:02:57,941 | INFO     | preparing for final server update for job 6238896254 in state='finished'
[2024-06-21 03:03:19] 2024-06-21 10:02:57,942 | INFO     | this job has now completed (state=finished)
[2024-06-21 03:03:19] 2024-06-21 10:02:57,942 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-21 03:03:19] 2024-06-21 10:02:57,942 | INFO     | job 6238896254 has finished - writing final server update
[2024-06-21 03:03:19] 2024-06-21 10:02:57,943 | INFO     | total number of processed events: 1850 (read)
[2024-06-21 03:03:19] 2024-06-21 10:02:57,950 | INFO     | executing command: lscpu
[2024-06-21 03:03:19] 2024-06-21 10:02:58,019 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-21 03:03:19] 2024-06-21 10:02:58,020 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-21 03:03:19] 2024-06-21 10:02:58,077 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-21 03:03:19] 2024-06-21 10:02:59,775 | INFO     | monitor loop #1808: job 0:6238896254 is in state 'finished'
[2024-06-21 03:03:19] 2024-06-21 10:02:59,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 03:03:19] 2024-06-21 10:03:02,085 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-21 03:03:19] 2024-06-21 10:03:02,086 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6238896254/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 03:03:19] 2024-06-21 10:03:02,088 | INFO     | extracted standard info from prmon json
[2024-06-21 03:03:19] 2024-06-21 10:03:02,088 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 03:03:19] 2024-06-21 10:03:02,088 | WARNING  | GPU info not found in prmon json
[2024-06-21 03:03:19] 2024-06-21 10:03:02,092 | INFO     | fitting pss+swap vs Time
[2024-06-21 03:03:19] 2024-06-21 10:03:02,093 | INFO     | model: linear, x: [1718938931.0, 1718938992.0, 1718939053.0, 1718939114.0, 1718939175.0, 1718939236.0, 1718939297.0, 1718939358.0, 1718939419.0, 1718939480.0, 1718
[2024-06-21 03:03:19] 2024-06-21 10:03:02,093 | INFO     | sum of square deviations: 21995286992.43495
[2024-06-21 03:03:19] 2024-06-21 10:03:02,095 | INFO     | sum of deviations: 1585429015037.9846
[2024-06-21 03:03:19] 2024-06-21 10:03:02,095 | INFO     | mean x: 1718951528.884058
[2024-06-21 03:03:19] 2024-06-21 10:03:02,095 | INFO     | mean y: 3644561.270531401
[2024-06-21 03:03:19] 2024-06-21 10:03:02,095 | INFO     | -- intersect: -123899063790.47862
[2024-06-21 03:03:19] 2024-06-21 10:03:02,095 | INFO     | intersect: -123899063790.47862
[2024-06-21 03:03:19] 2024-06-21 10:03:02,095 | INFO     | chi2: 25.302270992718253
[2024-06-21 03:03:19] 2024-06-21 10:03:02,096 | INFO     | model: linear, x: [1718938931.0, 1718938992.0, 1718939053.0, 1718939114.0, 1718939175.0, 1718939236.0, 1718939297.0, 1718939358.0, 1718939419.0, 1718939480.0, 1718
[2024-06-21 03:03:19] 2024-06-21 10:03:02,096 | INFO     | sum of square deviations: 21207846980.239677
[2024-06-21 03:03:19] 2024-06-21 10:03:02,097 | INFO     | sum of deviations: 1766863954173.9705
[2024-06-21 03:03:19] 2024-06-21 10:03:02,097 | INFO     | mean x: 1718951376.400978
[2024-06-21 03:03:19] 2024-06-21 10:03:02,098 | INFO     | mean y: 3679701.5794621026
[2024-06-21 03:03:19] 2024-06-21 10:03:02,098 | INFO     | -- intersect: -143205257479.5722
[2024-06-21 03:03:19] 2024-06-21 10:03:02,098 | INFO     | intersect: -143205257479.5722
[2024-06-21 03:03:19] 2024-06-21 10:03:02,098 | INFO     | chi2: 21.66175024238467
[2024-06-21 03:03:19] 2024-06-21 10:03:02,098 | INFO     | current chi2=21.66175024238467 (change=14.38811856604211 %)
[2024-06-21 03:03:19] 2024-06-21 10:03:02,098 | INFO     | right removable region: 408
[2024-06-21 03:03:19] 2024-06-21 10:03:02,098 | INFO     | model: linear, x: [1718939236.0, 1718939297.0, 1718939358.0, 1718939419.0, 1718939480.0, 1718939541.0, 1718939602.0, 1718939663.0, 1718939724.0, 1718939785.0, 1718
[2024-06-21 03:03:19] 2024-06-21 10:03:02,098 | INFO     | sum of square deviations: 21207497450.239677
[2024-06-21 03:03:19] 2024-06-21 10:03:02,100 | INFO     | sum of deviations: 1393583044713.6743
[2024-06-21 03:03:19] 2024-06-21 10:03:02,100 | INFO     | mean x: 1718951681.400978
[2024-06-21 03:03:19] 2024-06-21 10:03:02,100 | INFO     | mean y: 3681686.312958435
[2024-06-21 03:03:19] 2024-06-21 10:03:02,100 | INFO     | -- intersect: -112951744737.911
[2024-06-21 03:03:19] 2024-06-21 10:03:02,100 | INFO     | intersect: -112951744737.911
[2024-06-21 03:03:19] 2024-06-21 10:03:02,100 | INFO     | chi2: 21.687806761161
[2024-06-21 03:03:19] 2024-06-21 10:03:02,100 | INFO     | current chi2=21.687806761161 (change=14.285137617083704 %)
[2024-06-21 03:03:19] 2024-06-21 10:03:02,100 | INFO     | left removable region: 10
[2024-06-21 03:03:19] 2024-06-21 10:03:02,101 | INFO     | model: linear, x: [1718939541.0, 1718939602.0, 1718939663.0, 1718939724.0, 1718939785.0, 1718939846.0, 1718939907.0, 1718939968.0, 1718940029.0, 1718940090.0, 1718
[2024-06-21 03:03:19] 2024-06-21 10:03:02,101 | INFO     | sum of square deviations: 19541415560.552704
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | sum of deviations: 1438061467912.1602
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | mean x: 1718951650.9396985
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | mean y: 3761268.673366834
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | -- intersect: -126494655734.97475
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | intersect: -126494655734.97475
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | chi2: 14.47157484256715
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | -- intersect: -126494655734.97475
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | current memory leak: 73.59 B/s (using 398 data points, chi2=14.47)
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | ..............................
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | . Timing measurements:
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | . get job = 0 s
[2024-06-21 03:03:19] 2024-06-21 10:03:02,103 | INFO     | . initial setup = 2 s
[2024-06-21 03:03:19] 2024-06-21 10:03:02,104 | INFO     | . payload setup = 10 s
[2024-06-21 03:03:19] 2024-06-21 10:03:02,104 | INFO     | . stage-in = 0 s
[2024-06-21 03:03:19] 2024-06-21 10:03:02,104 | INFO     | . payload execution = 25242 s
[2024-06-21 03:03:19] 2024-06-21 10:03:02,104 | INFO     | . stage-out = 3 s
[2024-06-21 03:03:19] 2024-06-21 10:03:02,104 | INFO     | . log creation = 0 s
[2024-06-21 03:03:19] 2024-06-21 10:03:02,104 | INFO     | ..............................
[2024-06-21 03:03:19] 2024-06-21 10:03:02,391 | INFO     | 
[2024-06-21 03:03:19] 2024-06-21 10:03:02,391 | INFO     | job summary report
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | --------------------------------------------------
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | PanDA job id: 6238896254
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | task id: 38734053
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | errors: (none)
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | pilot state: finished 
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | transexitcode: 0
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | exeerrorcode: 0
[2024-06-21 03:03:19] 2024-06-21 10:03:02,392 | INFO     | exeerrordiag: 
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | exitcode: 0
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | exitmsg: OK
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | cpuconsumptiontime: 172742 s
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | nevents: 1850
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | neventsw: 0
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | pid: 119065
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | pgrp: 119065
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | corecount: 12
[2024-06-21 03:03:19] 2024-06-21 10:03:02,393 | INFO     | event service: False
[2024-06-21 03:03:19] 2024-06-21 10:03:02,394 | INFO     | sizes: {0: 2387379, 3: 2387585, 11: 2387613, 25255: 2443242, 25259: 2452196, 25262: 2452252, 25267: 2452602}
[2024-06-21 03:03:19] 2024-06-21 10:03:02,394 | INFO     | --------------------------------------------------
[2024-06-21 03:03:19] 2024-06-21 10:03:02,394 | INFO     | 
[2024-06-21 03:03:19] 2024-06-21 10:03:02,394 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-21 03:03:19] 2024-06-21 10:03:02,424 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,424 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,424 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,424 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,426 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 03:03:19] 2024-06-21 10:03:02,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,426 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 03:03:19] 2024-06-21 10:03:02,426 | INFO     | job 6238896254 has completed (purged errors)
[2024-06-21 03:03:19] 2024-06-21 10:03:02,427 | INFO     | overall cleanup function is called
[2024-06-21 03:03:19] 2024-06-21 10:03:03,447 | INFO     | --- collectZombieJob: --- 10, [119065]
[2024-06-21 03:03:19] 2024-06-21 10:03:03,447 | INFO     | zombie collector waiting for pid 119065
[2024-06-21 03:03:19] 2024-06-21 10:03:03,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 03:03:19] 2024-06-21 10:03:04,453 | INFO     | collected zombie processes
[2024-06-21 03:03:19] 2024-06-21 10:03:04,453 | INFO     | will now attempt to kill all subprocesses of pid=119065
[2024-06-21 03:03:19] 2024-06-21 10:03:04,563 | INFO     | process IDs to be killed: [119065] (in reverse order)
[2024-06-21 03:03:19] 2024-06-21 10:03:04,654 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 03:03:19] 2024-06-21 10:03:04,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 03:03:19] 2024-06-21 10:03:04,661 | INFO     | did not find any defunct processes belonging to 119065
[2024-06-21 03:03:19] 2024-06-21 10:03:04,667 | INFO     | did not find any defunct processes belonging to 119065
[2024-06-21 03:03:19] 2024-06-21 10:03:04,667 | INFO     | ready for new job
[2024-06-21 03:03:19] 2024-06-21 10:03:04,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 03:03:19] 2024-06-21 10:03:04,671 | INFO     | *************************************
[2024-06-21 03:03:19] 2024-06-21 10:03:04,671 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 03:03:19] 2024-06-21 10:03:04,672 | INFO     | *************************************
[2024-06-21 03:03:19] 2024-06-21 10:03:04,672 | INFO     | 
[2024-06-21 03:03:19] 2024-06-21 10:03:04,677 | INFO     | architecture information:
[2024-06-21 03:03:19] 2024-06-21 10:03:04,677 | INFO     | executing command: cat /etc/os-release
[2024-06-21 03:03:19] 2024-06-21 10:03:04,700 | INFO     | cat /etc/os-release:
[2024-06-21 03:03:19] NAME="CentOS Linux"
[2024-06-21 03:03:19] VERSION="7 (Core)"
[2024-06-21 03:03:19] ID="centos"
[2024-06-21 03:03:19] ID_LIKE="rhel fedora"
[2024-06-21 03:03:19] VERSION_ID="7"
[2024-06-21 03:03:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 03:03:19] ANSI_COLOR="0;31"
[2024-06-21 03:03:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 03:03:19] HOME_URL="https://www.centos.org/"
[2024-06-21 03:03:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 03:03:19] 
[2024-06-21 03:03:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 03:03:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 03:03:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 03:03:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 03:03:19] 
[2024-06-21 03:03:19] 2024-06-21 10:03:04,700 | INFO     | *************************************
[2024-06-21 03:03:19] 2024-06-21 10:03:05,204 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-21 03:03:19] 2024-06-21 10:03:05,231 | INFO     | sufficient remaining disk space (1365346615296 B)
[2024-06-21 03:03:19] 2024-06-21 10:03:05,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 03:03:19] 2024-06-21 10:03:05,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 03:03:19] 2024-06-21 10:03:05,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 03:03:19] 2024-06-21 10:03:05,339 | INFO     | all data control threads have been joined
[2024-06-21 03:03:19] 2024-06-21 10:03:05,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 03:03:19] 2024-06-21 10:03:05,790 | INFO     | aborting loop
[2024-06-21 03:03:19] 2024-06-21 10:03:05,993 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 03:03:19] 2024-06-21 10:03:05,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 03:03:19] 2024-06-21 10:03:05,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 03:03:19] 2024-06-21 10:03:06,238 | INFO     | [job] retrieve thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:06,345 | INFO     | [data] control thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:06,399 | INFO     | [payload] failed_post thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:06,540 | INFO     | all job control threads have been joined
[2024-06-21 03:03:19] 2024-06-21 10:03:06,584 | INFO     | [payload] validate_post thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:06,587 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:06,638 | INFO     | all payload control threads have been joined
[2024-06-21 03:03:19] 2024-06-21 10:03:06,796 | INFO     | [job] job monitor thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:07,007 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:07,087 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:07,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 03:03:19] 2024-06-21 10:03:07,235 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:07,239 | INFO     | [data] copytool_out thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:07,547 | INFO     | [job] control thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:07,597 | INFO     | [job] validate thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:07,645 | INFO     | [payload] control thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:07,672 | INFO     | [data] copytool_in thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:08,169 | INFO     | [job] queue monitor thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:08,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 03:03:19] 2024-06-21 10:03:12,469 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 03:03:19] 2024-06-21 10:03:13,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813288982336)>', '<ExcThread(monitor, started 139812568811264)>']
[2024-06-21 03:03:19] 2024-06-21 10:03:14,038 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 03:03:19] 2024-06-21 10:03:14,038 | INFO     | [monitor] control thread has ended
[2024-06-21 03:03:19] 2024-06-21 10:03:18,806 | INFO     | all workflow threads have been joined
[2024-06-21 03:03:19] 2024-06-21 10:03:18,807 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 03:03:19] 2024-06-21 10:03:18,808 | INFO     | traces error code: 0
[2024-06-21 03:03:19] 2024-06-21 10:03:18,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 03:03:19] 2024-06-21 10:03:18,930 [wrapper] ==== pilot stdout END ====
[2024-06-21 03:03:19] 2024-06-21 10:03:18,934 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 03:03:19] 2024-06-21 10:03:18,937 [wrapper] pilotpid: 111937
[2024-06-21 03:03:19] 2024-06-21 10:03:18,941 [wrapper] Pilot exit status: 0
[2024-06-21 03:03:19] 2024-06-21 10:03:18,957 [wrapper] pandaids: 6238896254
[2024-06-21 03:03:19] 2024-06-21 10:03:19,020 [wrapper] cleanup supervisor_pilot  43098 111938
[2024-06-21 03:03:19] 2024-06-21 10:03:19,025 [wrapper] Test setup, not cleaning
[2024-06-21 03:03:19] 2024-06-21 10:03:19,029 [wrapper] ==== wrapper stdout END ====
[2024-06-21 03:03:19] 2024-06-21 10:03:19,033 [wrapper] ==== wrapper stderr END ====
[2024-06-21 03:03:19] 2024-06-21 10:03:19,041 [wrapper] apfmon messages muted
[2024-06-21 03:03:19]  *** Error codes and diagnostics ***
[2024-06-21 03:03:19]     "exeErrorCode": 0,
[2024-06-21 03:03:19]     "exeErrorDiag": "",
[2024-06-21 03:03:19]     "pilotErrorCode": 0,
[2024-06-21 03:03:19]     "pilotErrorDiag": "",
[2024-06-21 03:03:19]  *** Listing of results directory ***
[2024-06-21 03:03:19] total 1429788
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc     469766 Jun 19 13:49 pilot3.tar.gz
[2024-06-21 03:03:19] -rwx------ 1 boinc boinc      32308 Jun 19 14:11 runpilot2-wrapper.sh
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc       5654 Jun 19 14:11 queuedata.json
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc        100 Jun 20 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 03:03:19] -rwxr-xr-x 1 boinc boinc       7986 Jun 20 20:01 run_atlas
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc        105 Jun 20 20:01 job.xml
[2024-06-21 03:03:19] -rw-r--r-- 2 boinc boinc  327605455 Jun 20 20:01 EVNT.38734051._000684.pool.root.1
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc       6616 Jun 20 20:01 init_data.xml
[2024-06-21 03:03:19] -rw-r--r-- 2 boinc boinc      17537 Jun 20 20:01 start_atlas.sh
[2024-06-21 03:03:19] drwxrwx--x 2 boinc boinc       4096 Jun 20 20:01 shared
[2024-06-21 03:03:19] -rw-r--r-- 2 boinc boinc     482682 Jun 20 20:01 input.tar.gz
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc          0 Jun 20 20:01 boinc_lockfile
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc       2850 Jun 20 20:01 pandaJob.out
[2024-06-21 03:03:19] -rw------- 1 boinc boinc        424 Jun 20 20:01 setup.sh.local
[2024-06-21 03:03:19] -rw------- 1 boinc boinc    1024126 Jun 20 20:01 agis_schedconf.cvmfs.json
[2024-06-21 03:03:19] -rw------- 1 boinc boinc    1321251 Jun 20 20:01 cric_ddmendpoints.json
[2024-06-21 03:03:19] drwx------ 4 boinc boinc       4096 Jun 20 20:01 pilot3
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc        533 Jun 21 02:52 boinc_task_state.xml
[2024-06-21 03:03:19] -rw------- 1 boinc boinc         95 Jun 21 03:02 pilot_heartbeat.json
[2024-06-21 03:03:19] -rw------- 1 boinc boinc 1123419879 Jun 21 03:02 HITS.38734053._011427.pool.root.1
[2024-06-21 03:03:19] -rw------- 1 boinc boinc       1076 Jun 21 03:02 memory_monitor_summary.json
[2024-06-21 03:03:19] -rw------- 1 boinc boinc          0 Jun 21 03:02 agis_ddmendpoints.agis.ALL.json
[2024-06-21 03:03:19] -rw------- 1 boinc boinc    2403311 Jun 21 03:02 log.38734053._011427.job.log.tgz.1
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc       8192 Jun 21 03:02 boinc_mmap_file
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc         29 Jun 21 03:02 wrapper_checkpoint.txt
[2024-06-21 03:03:19] -rw------- 1 boinc boinc      27775 Jun 21 03:03 heartbeat.json
[2024-06-21 03:03:19] -rw------- 1 boinc boinc       4210 Jun 21 03:03 pilotlog.txt
[2024-06-21 03:03:19] -rw------- 1 boinc boinc    2347099 Jun 21 03:03 log.38734053._011427.job.log.1
[2024-06-21 03:03:19] -rw------- 1 boinc boinc        353 Jun 21 03:03 output.list
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc        620 Jun 21 03:03 runtime_log
[2024-06-21 03:03:19] -rw------- 1 boinc boinc    4792320 Jun 21 03:03 result.tar.gz
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc      11131 Jun 21 03:03 runtime_log.err
[2024-06-21 03:03:19] -rw------- 1 boinc boinc        664 Jun 21 03:03 AykNDmTlHe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmUUkKDmkyQvQo.diag
[2024-06-21 03:03:19] -rw-r--r-- 1 boinc boinc      22003 Jun 21 03:03 stderr.txt
[2024-06-21 03:03:19] HITS file was successfully produced:
[2024-06-21 03:03:19] -rw------- 1 boinc boinc 1123419879 Jun 21 03:02 shared/HITS.pool.root.1
[2024-06-21 03:03:19]  *** Contents of shared directory: ***
[2024-06-21 03:03:19] total 1422196
[2024-06-21 03:03:19] -rw-r--r-- 2 boinc boinc  327605455 Jun 20 20:01 ATLAS.root_0
[2024-06-21 03:03:19] -rw-r--r-- 2 boinc boinc      17537 Jun 20 20:01 start_atlas.sh
[2024-06-21 03:03:19] -rw-r--r-- 2 boinc boinc     482682 Jun 20 20:01 input.tar.gz
[2024-06-21 03:03:19] -rw------- 1 boinc boinc 1123419879 Jun 21 03:02 HITS.pool.root.1
[2024-06-21 03:03:19] -rw------- 1 boinc boinc    4792320 Jun 21 03:03 result.tar.gz
03:03:21 (107758): run_atlas exited; CPU time 170271.386516
03:03:21 (107758): called boinc_finish(0)

</stderr_txt>
]]>

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