Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:39:10 (69613): wrapper (7.7.26015): starting
23:39:10 (69613): wrapper: running run_atlas (--nthreads 8)
[2024-06-19 23:39:10] Arguments: --nthreads 8
[2024-06-19 23:39:10] Threads: 8
[2024-06-19 23:39:10] Checking for CVMFS
[2024-06-19 23:39:11] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-19 23:39:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-19 23:39:11] Running cvmfs_config stat atlas.cern.ch
[2024-06-19 23:39:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-19 23:39:13] 2.11.2.0 92756 12549 108520 134077 1 139 13656573 18432000 19769 130560 0 74646776 99.180 117085992 54717 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-19 23:39:13] CVMFS is ok
[2024-06-19 23:39:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-19 23:39:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-19 23:39:13] Further information can be found at the LHC@home message board.
[2024-06-19 23:39:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-19 23:39:13] Checking for apptainer binary...
[2024-06-19 23:39:13] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-19 23:39:13] Running /usr/bin/apptainer --version
[2024-06-19 23:39:13] apptainer version 1.3.1-1.el7
[2024-06-19 23:39:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-19 23:39:48] c-212-11.aglt2.org
[2024-06-19 23:39:48] apptainer works
[2024-06-19 23:39:48] Set ATHENA_PROC_NUMBER=8
[2024-06-19 23:39:48] Set ATHENA_CORE_NUMBER=8
[2024-06-19 23:39:48] Starting ATLAS job with PandaID=6238311130
[2024-06-19 23:39:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 14:04:16]  *** The last 200 lines of the pilot log: ***
[2024-06-20 14:04:16] 2024-06-20 18:03:38,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 14:04:16] 2024-06-20 18:03:40,866 | INFO     | monitor loop #3572: job 0:6238311130 is in state 'finished'
[2024-06-20 14:04:16] 2024-06-20 18:03:40,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 14:04:16] 2024-06-20 18:03:41,332 | INFO     | 51643s have passed since pilot start
[2024-06-20 14:04:16] 2024-06-20 18:03:43,375 | INFO     | monitor loop #3573: job 0:6238311130 is in state 'finished'
[2024-06-20 14:04:16] 2024-06-20 18:03:43,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 14:04:16] 2024-06-20 18:03:45,883 | INFO     | monitor loop #3574: job 0:6238311130 is in state 'finished'
[2024-06-20 14:04:16] 2024-06-20 18:03:45,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 14:04:16] 2024-06-20 18:03:48,410 | INFO     | monitor loop #3575: job 0:6238311130 is in state 'finished'
[2024-06-20 14:04:16] 2024-06-20 18:03:48,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 14:04:16] 2024-06-20 18:03:50,915 | INFO     | monitor loop #3576: job 0:6238311130 is in state 'finished'
[2024-06-20 14:04:16] 2024-06-20 18:03:50,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 14:04:16] 2024-06-20 18:03:53,421 | INFO     | monitor loop #3577: job 0:6238311130 is in state 'finished'
[2024-06-20 14:04:16] 2024-06-20 18:03:53,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 14:04:16] 2024-06-20 18:03:54,223 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-20 14:04:16] 2024-06-20 18:03:54,223 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6238311130/memory_monitor_summary.json (trf name=prmon)
[2024-06-20 14:04:16] 2024-06-20 18:03:54,224 | INFO     | extracted standard info from prmon json
[2024-06-20 14:04:16] 2024-06-20 18:03:54,224 | INFO     | extracted standard memory fields from prmon json
[2024-06-20 14:04:16] 2024-06-20 18:03:54,224 | WARNING  | GPU info not found in prmon json
[2024-06-20 14:04:16] 2024-06-20 18:03:54,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-20 14:04:16] 2024-06-20 18:03:54,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 14:04:16] 2024-06-20 18:03:54,249 | INFO     | fitting pss+swap vs Time
[2024-06-20 14:04:16] 2024-06-20 18:03:54,254 | INFO     | model: linear, x: [1718855340.0, 1718855401.0, 1718855462.0, 1718855523.0, 1718855584.0, 1718855645.0, 1718855706.0, 1718855767.0, 1718855828.0, 1718855889.0, 1718
[2024-06-20 14:04:16] 2024-06-20 18:03:54,254 | INFO     | sum of square deviations: 183787481637.9951
[2024-06-20 14:04:16] 2024-06-20 18:03:54,277 | INFO     | sum of deviations: 1894917575583.8328
[2024-06-20 14:04:16] 2024-06-20 18:03:54,277 | INFO     | mean x: 1718880929.5690477
[2024-06-20 14:04:16] 2024-06-20 18:03:54,277 | INFO     | mean y: 2444548.4166666665
[2024-06-20 14:04:16] 2024-06-20 18:03:54,277 | INFO     | -- intersect: -17719859793.245872
[2024-06-20 14:04:16] 2024-06-20 18:03:54,277 | INFO     | intersect: -17719859793.245872
[2024-06-20 14:04:16] 2024-06-20 18:03:54,278 | INFO     | chi2: 22.703066243826292
[2024-06-20 14:04:16] 2024-06-20 18:03:54,279 | INFO     | model: linear, x: [1718855340.0, 1718855401.0, 1718855462.0, 1718855523.0, 1718855584.0, 1718855645.0, 1718855706.0, 1718855767.0, 1718855828.0, 1718855889.0, 1718
[2024-06-20 14:04:16] 2024-06-20 18:03:54,279 | INFO     | sum of square deviations: 180525075367.97134
[2024-06-20 14:04:16] 2024-06-20 18:03:54,320 | INFO     | sum of deviations: 2059944783480.7085
[2024-06-20 14:04:16] 2024-06-20 18:03:54,320 | INFO     | mean x: 1718880777.069461
[2024-06-20 14:04:16] 2024-06-20 18:03:54,320 | INFO     | mean y: 2452242.9532934134
[2024-06-20 14:04:16] 2024-06-20 18:03:54,320 | INFO     | -- intersect: -19611440635.541023
[2024-06-20 14:04:16] 2024-06-20 18:03:54,320 | INFO     | intersect: -19611440635.541023
[2024-06-20 14:04:16] 2024-06-20 18:03:54,321 | INFO     | chi2: 20.308109260525363
[2024-06-20 14:04:16] 2024-06-20 18:03:54,321 | INFO     | current chi2=20.308109260525363 (change=10.549046360432465 %)
[2024-06-20 14:04:16] 2024-06-20 18:03:54,321 | INFO     | right removable region: 834
[2024-06-20 14:04:16] 2024-06-20 18:03:54,355 | INFO     | model: linear, x: [1718855645.0, 1718855706.0, 1718855767.0, 1718855828.0, 1718855889.0, 1718855950.0, 1718856011.0, 1718856072.0, 1718856133.0, 1718856194.0, 1718
[2024-06-20 14:04:16] 2024-06-20 18:03:54,355 | INFO     | sum of square deviations: 180525039987.97128
[2024-06-20 14:04:16] 2024-06-20 18:03:54,424 | INFO     | sum of deviations: 1611045893256.58
[2024-06-20 14:04:16] 2024-06-20 18:03:54,425 | INFO     | mean x: 1718881082.069461
[2024-06-20 14:04:16] 2024-06-20 18:03:54,425 | INFO     | mean y: 2457814.3520958084
[2024-06-20 14:04:16] 2024-06-20 18:03:54,425 | INFO     | -- intersect: -15337221979.924356
[2024-06-20 14:04:16] 2024-06-20 18:03:54,425 | INFO     | intersect: -15337221979.924356
[2024-06-20 14:04:16] 2024-06-20 18:03:54,426 | INFO     | chi2: 18.13885603970948
[2024-06-20 14:04:16] 2024-06-20 18:03:54,426 | INFO     | current chi2=18.13885603970948 (change=20.103937305640248 %)
[2024-06-20 14:04:16] 2024-06-20 18:03:54,426 | INFO     | left removable region: 10
[2024-06-20 14:04:16] 2024-06-20 18:03:54,427 | INFO     | model: linear, x: [1718855950.0, 1718856011.0, 1718856072.0, 1718856133.0, 1718856194.0, 1718856255.0, 1718856316.0, 1718856377.0, 1718856438.0, 1718856499.0, 1718
[2024-06-20 14:04:16] 2024-06-20 18:03:54,427 | INFO     | sum of square deviations: 173484092905.91736
[2024-06-20 14:04:16] 2024-06-20 18:03:54,452 | INFO     | sum of deviations: 1539845431191.1572
[2024-06-20 14:04:16] 2024-06-20 18:03:54,452 | INFO     | mean x: 1718881051.5703883
[2024-06-20 14:04:16] 2024-06-20 18:03:54,453 | INFO     | mean y: 2476776.514563107
[2024-06-20 14:04:16] 2024-06-20 18:03:54,453 | INFO     | -- intersect: -15254317605.53356
[2024-06-20 14:04:16] 2024-06-20 18:03:54,453 | INFO     | intersect: -15254317605.53356
[2024-06-20 14:04:16] 2024-06-20 18:03:54,458 | INFO     | chi2: 12.677434678129348
[2024-06-20 14:04:16] 2024-06-20 18:03:54,458 | INFO     | -- intersect: -15254317605.53356
[2024-06-20 14:04:16] 2024-06-20 18:03:54,458 | INFO     | current memory leak: 8.88 B/s (using 824 data points, chi2=12.68)
[2024-06-20 14:04:16] 2024-06-20 18:03:54,459 | INFO     | ..............................
[2024-06-20 14:04:16] 2024-06-20 18:03:54,459 | INFO     | . Timing measurements:
[2024-06-20 14:04:16] 2024-06-20 18:03:54,459 | INFO     | . get job = 0 s
[2024-06-20 14:04:16] 2024-06-20 18:03:54,459 | INFO     | . initial setup = 10 s
[2024-06-20 14:04:16] 2024-06-20 18:03:54,459 | INFO     | . payload setup = 102 s
[2024-06-20 14:04:16] 2024-06-20 18:03:54,459 | INFO     | . stage-in = 0 s
[2024-06-20 14:04:16] 2024-06-20 18:03:54,460 | INFO     | . payload execution = 51310 s
[2024-06-20 14:04:16] 2024-06-20 18:03:54,460 | INFO     | . stage-out = 12 s
[2024-06-20 14:04:16] 2024-06-20 18:03:54,460 | INFO     | . log creation = 1 s
[2024-06-20 14:04:16] 2024-06-20 18:03:54,460 | INFO     | ..............................
[2024-06-20 14:04:16] 2024-06-20 18:03:54,797 | INFO     | 
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | job summary report
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | --------------------------------------------------
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | PanDA job id: 6238311130
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | task id: 38921013
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | errors: (none)
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | pilot state: finished 
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | transexitcode: 0
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | exeerrorcode: 0
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | exeerrordiag: 
[2024-06-20 14:04:16] 2024-06-20 18:03:54,801 | INFO     | exitcode: 0
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | exitmsg: OK
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | cpuconsumptiontime: 142931 s
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | nevents: 400
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | neventsw: 0
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | pid: 74041
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | pgrp: 74041
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | corecount: 8
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | event service: False
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | sizes: {0: 2384998, 1: 2385197, 2: 2385197, 13: 2385225, 23: 2385281, 34: 2385309, 45: 2385465, 56: 2385493, 67: 2385521, 74: 2385755, 78: 2385783, 51418: 2433245,
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | --------------------------------------------------
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | 
[2024-06-20 14:04:16] 2024-06-20 18:03:54,802 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,081 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 14:04:16] 2024-06-20 18:03:55,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,081 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 14:04:16] 2024-06-20 18:03:55,081 | INFO     | job 6238311130 has completed (purged errors)
[2024-06-20 14:04:16] 2024-06-20 18:03:55,081 | INFO     | overall cleanup function is called
[2024-06-20 14:04:16] 2024-06-20 18:03:56,171 | INFO     | --- collectZombieJob: --- 10, [74041]
[2024-06-20 14:04:16] 2024-06-20 18:03:56,171 | INFO     | zombie collector waiting for pid 74041
[2024-06-20 14:04:16] 2024-06-20 18:03:56,171 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 14:04:16] 2024-06-20 18:03:57,177 | INFO     | collected zombie processes
[2024-06-20 14:04:16] 2024-06-20 18:03:57,177 | INFO     | will now attempt to kill all subprocesses of pid=74041
[2024-06-20 14:04:16] 2024-06-20 18:03:58,042 | INFO     | process IDs to be killed: [74041] (in reverse order)
[2024-06-20 14:04:16] 2024-06-20 18:03:58,798 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 14:04:16] 2024-06-20 18:03:58,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 14:04:16] 2024-06-20 18:03:58,809 | INFO     | did not find any defunct processes belonging to 74041
[2024-06-20 14:04:16] 2024-06-20 18:03:58,823 | INFO     | did not find any defunct processes belonging to 74041
[2024-06-20 14:04:16] 2024-06-20 18:03:58,823 | INFO     | ready for new job
[2024-06-20 14:04:16] 2024-06-20 18:03:58,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 14:04:16] 2024-06-20 18:03:58,835 | INFO     | *************************************
[2024-06-20 14:04:16] 2024-06-20 18:03:58,835 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 14:04:16] 2024-06-20 18:03:58,836 | INFO     | *************************************
[2024-06-20 14:04:16] 2024-06-20 18:03:58,836 | INFO     | 
[2024-06-20 14:04:16] 2024-06-20 18:03:58,848 | INFO     | architecture information:
[2024-06-20 14:04:16] 2024-06-20 18:03:58,858 | INFO     | executing command: cat /etc/os-release
[2024-06-20 14:04:16] 2024-06-20 18:03:59,100 | INFO     | cat /etc/os-release:
[2024-06-20 14:04:16] NAME="CentOS Linux"
[2024-06-20 14:04:16] VERSION="7 (Core)"
[2024-06-20 14:04:16] ID="centos"
[2024-06-20 14:04:16] ID_LIKE="rhel fedora"
[2024-06-20 14:04:16] VERSION_ID="7"
[2024-06-20 14:04:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 14:04:16] ANSI_COLOR="0;31"
[2024-06-20 14:04:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 14:04:16] HOME_URL="https://www.centos.org/"
[2024-06-20 14:04:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 14:04:16] 
[2024-06-20 14:04:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 14:04:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 14:04:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 14:04:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 14:04:16] 
[2024-06-20 14:04:16] 2024-06-20 18:03:59,101 | INFO     | *************************************
[2024-06-20 14:04:16] 2024-06-20 18:03:59,607 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-20 14:04:16] 2024-06-20 18:03:59,794 | INFO     | sufficient remaining disk space (98966700032 B)
[2024-06-20 14:04:16] 2024-06-20 18:03:59,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 14:04:16] 2024-06-20 18:03:59,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 14:04:16] 2024-06-20 18:03:59,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 14:04:16] 2024-06-20 18:03:59,794 | INFO     | aborting loop
[2024-06-20 14:04:16] 2024-06-20 18:03:59,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 14:04:16] 2024-06-20 18:03:59,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 14:04:16] 2024-06-20 18:04:00,379 | INFO     | all data control threads have been joined
[2024-06-20 14:04:16] 2024-06-20 18:04:00,415 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 14:04:16] 2024-06-20 18:04:00,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 14:04:16] 2024-06-20 18:04:00,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 14:04:16] 2024-06-20 18:04:00,800 | INFO     | [job] retrieve thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:00,804 | INFO     | [job] job monitor thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:00,836 | INFO     | [job] queue monitor thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:00,885 | INFO     | [payload] failed_post thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:00,967 | INFO     | all payload control threads have been joined
[2024-06-20 14:04:16] 2024-06-20 18:04:01,320 | INFO     | all job control threads have been joined
[2024-06-20 14:04:16] 2024-06-20 18:04:01,390 | INFO     | [data] control thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:01,453 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:01,512 | INFO     | [job] validate thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:01,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 14:04:16] 2024-06-20 18:04:01,955 | INFO     | [data] copytool_out thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:01,973 | INFO     | [payload] control thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:01,984 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:01,991 | INFO     | [payload] validate_post thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:02,082 | INFO     | [data] copytool_in thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:02,110 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:02,136 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:02,326 | INFO     | [job] control thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:05,842 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 14:04:16] 2024-06-20 18:04:05,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910588225344)>', '<ExcThread(monitor, started 139910153492224)>']
[2024-06-20 14:04:16] 2024-06-20 18:04:06,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 14:04:16] 2024-06-20 18:04:06,453 | INFO     | [monitor] control thread has ended
[2024-06-20 14:04:16] 2024-06-20 18:04:10,954 | INFO     | all workflow threads have been joined
[2024-06-20 14:04:16] 2024-06-20 18:04:10,954 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 14:04:16] 2024-06-20 18:04:10,966 | INFO     | traces error code: 0
[2024-06-20 14:04:16] 2024-06-20 18:04:10,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 14:04:16] 2024-06-20 18:04:12,585 [wrapper] ==== pilot stdout END ====
[2024-06-20 14:04:16] 2024-06-20 18:04:12,607 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 14:04:16] 2024-06-20 18:04:12,648 [wrapper] pilotpid: 31813
[2024-06-20 14:04:16] 2024-06-20 18:04:12,690 [wrapper] Pilot exit status: 0
[2024-06-20 14:04:16] 2024-06-20 18:04:12,889 [wrapper] pandaids: 6238311130
[2024-06-20 14:04:16] 2024-06-20 18:04:13,801 [wrapper] cleanup supervisor_pilot 70490 31814
[2024-06-20 14:04:16] 2024-06-20 18:04:13,843 [wrapper] Test setup, not cleaning
[2024-06-20 14:04:16] 2024-06-20 18:04:13,883 [wrapper] ==== wrapper stdout END ====
[2024-06-20 14:04:16] 2024-06-20 18:04:13,939 [wrapper] ==== wrapper stderr END ====
[2024-06-20 14:04:16] 2024-06-20 18:04:14,017 [wrapper] apfmon messages muted
[2024-06-20 14:04:16]  *** Error codes and diagnostics ***
[2024-06-20 14:04:16]     "exeErrorCode": 0,
[2024-06-20 14:04:16]     "exeErrorDiag": "",
[2024-06-20 14:04:16]     "pilotErrorCode": 0,
[2024-06-20 14:04:16]     "pilotErrorDiag": "",
[2024-06-20 14:04:16]  *** Listing of results directory ***
[2024-06-20 14:04:16] total 885972
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas    469766 Jun 19 16:12 pilot3.tar.gz
[2024-06-20 14:04:16] -rwx------ 1 boincer umatlas     32308 Jun 19 16:37 runpilot2-wrapper.sh
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas      5654 Jun 19 16:37 queuedata.json
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas       100 Jun 19 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 14:04:16] -rwxr-xr-x 1 boincer umatlas      7986 Jun 19 23:39 run_atlas
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas       105 Jun 19 23:39 job.xml
[2024-06-20 14:04:16] -rw-r--r-- 2 boincer umatlas 541299714 Jun 19 23:39 EVNT.38776210._000460.pool.root.1
[2024-06-20 14:04:16] -rw-r--r-- 2 boincer umatlas     17537 Jun 19 23:39 start_atlas.sh
[2024-06-20 14:04:16] drwxrwx--x 2 boincer umatlas      4096 Jun 19 23:39 shared
[2024-06-20 14:04:16] -rw-r--r-- 2 boincer umatlas    482535 Jun 19 23:39 input.tar.gz
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas         0 Jun 19 23:39 boinc_lockfile
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas      2645 Jun 19 23:39 pandaJob.out
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas       467 Jun 19 23:40 setup.sh.local
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas   1021708 Jun 19 23:43 agis_schedconf.cvmfs.json
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas   1320365 Jun 19 23:43 cric_ddmendpoints.json
[2024-06-20 14:04:16] drwx------ 4 boincer umatlas      4096 Jun 19 23:43 pilot3
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas 350440958 Jun 20 13:59 HITS.38921013._049441.pool.root.1
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas       533 Jun 20 13:59 boinc_task_state.xml
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas      6387 Jun 20 14:01 init_data.xml
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas      1094 Jun 20 14:02 memory_monitor_summary.json
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas         0 Jun 20 14:02 agis_ddmendpoints.agis.ALL.json
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas    815337 Jun 20 14:02 log.38921013._049441.job.log.tgz.1
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas        95 Jun 20 14:03 pilot_heartbeat.json
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas      7790 Jun 20 14:03 heartbeat.json
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas      4211 Jun 20 14:04 pilotlog.txt
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas   5163134 Jun 20 14:04 log.38921013._049441.job.log.1
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas      8192 Jun 20 14:04 boinc_mmap_file
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas        29 Jun 20 14:04 wrapper_checkpoint.txt
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas       357 Jun 20 14:04 output.list
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas       620 Jun 20 14:04 runtime_log
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas   6000640 Jun 20 14:04 result.tar.gz
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas     11405 Jun 20 14:04 runtime_log.err
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas       655 Jun 20 14:04 28MMDm9EHe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmRxWKDmEGaVtm.diag
[2024-06-20 14:04:16] -rw-r--r-- 1 boincer umatlas     21900 Jun 20 14:04 stderr.txt
[2024-06-20 14:04:16] HITS file was successfully produced:
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas 350440958 Jun 20 13:59 shared/HITS.pool.root.1
[2024-06-20 14:04:16]  *** Contents of shared directory: ***
[2024-06-20 14:04:16] total 877204
[2024-06-20 14:04:16] -rw-r--r-- 2 boincer umatlas 541299714 Jun 19 23:39 ATLAS.root_0
[2024-06-20 14:04:16] -rw-r--r-- 2 boincer umatlas     17537 Jun 19 23:39 start_atlas.sh
[2024-06-20 14:04:16] -rw-r--r-- 2 boincer umatlas    482535 Jun 19 23:39 input.tar.gz
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas 350440958 Jun 20 13:59 HITS.pool.root.1
[2024-06-20 14:04:16] -rw------- 1 boincer umatlas   6000640 Jun 20 14:04 result.tar.gz
14:04:17 (69613): run_atlas exited; CPU time 139791.316367
14:04:17 (69613): called boinc_finish(0)

</stderr_txt>
]]>

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