Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:37:46 (164897): wrapper (7.7.26015): starting
21:37:46 (164897): wrapper: running run_atlas (--nthreads 8)
[2024-06-19 21:37:46] Arguments: --nthreads 8
[2024-06-19 21:37:46] Threads: 8
[2024-06-19 21:37:46] Checking for CVMFS
[2024-06-19 21:37:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-19 21:37:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-19 21:37:47] Running cvmfs_config stat atlas.cern.ch
[2024-06-19 21:37:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-19 21:37:48] 2.11.2.0 125836 19277 111676 134073 1 265 15061937 18432000 15331 130560 0 100209896 99.460 104553072 37466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-19 21:37:48] CVMFS is ok
[2024-06-19 21:37:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-19 21:37:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-19 21:37:48] Further information can be found at the LHC@home message board.
[2024-06-19 21:37:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-19 21:37:48] Checking for apptainer binary...
[2024-06-19 21:37:48] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-19 21:37:48] Running /usr/bin/apptainer --version
[2024-06-19 21:37:48] apptainer version 1.3.1-1.el7
[2024-06-19 21:37:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-19 21:38:09] c-211-35-2.aglt2.org
[2024-06-19 21:38:09] apptainer works
[2024-06-19 21:38:09] Set ATHENA_PROC_NUMBER=8
[2024-06-19 21:38:09] Set ATHENA_CORE_NUMBER=8
[2024-06-19 21:38:09] Starting ATLAS job with PandaID=6238236791
[2024-06-19 21:38:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 16:02:16]  *** The last 200 lines of the pilot log: ***
[2024-06-20 16:02:16] 2024-06-20 20:01:42,565 | INFO     | monitor loop #4358: job 0:6238236791 is in state 'finished'
[2024-06-20 16:02:16] 2024-06-20 20:01:42,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:02:16] 2024-06-20 20:01:45,069 | INFO     | monitor loop #4359: job 0:6238236791 is in state 'finished'
[2024-06-20 16:02:16] 2024-06-20 20:01:45,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:02:16] 2024-06-20 20:01:47,573 | INFO     | monitor loop #4360: job 0:6238236791 is in state 'finished'
[2024-06-20 16:02:16] 2024-06-20 20:01:47,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:02:16] 2024-06-20 20:01:50,078 | INFO     | monitor loop #4361: job 0:6238236791 is in state 'finished'
[2024-06-20 16:02:16] 2024-06-20 20:01:50,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:02:16] 2024-06-20 20:01:52,582 | INFO     | monitor loop #4362: job 0:6238236791 is in state 'finished'
[2024-06-20 16:02:16] 2024-06-20 20:01:52,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:02:16] 2024-06-20 20:01:54,776 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-20 16:02:16] 2024-06-20 20:01:54,777 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6238236791/memory_monitor_summary.json (trf name=prmon)
[2024-06-20 16:02:16] 2024-06-20 20:01:54,778 | INFO     | extracted standard info from prmon json
[2024-06-20 16:02:16] 2024-06-20 20:01:54,778 | INFO     | extracted standard memory fields from prmon json
[2024-06-20 16:02:16] 2024-06-20 20:01:54,778 | WARNING  | GPU info not found in prmon json
[2024-06-20 16:02:16] 2024-06-20 20:01:54,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-20 16:02:16] 2024-06-20 20:01:54,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 16:02:16] 2024-06-20 20:01:54,853 | INFO     | fitting pss+swap vs Time
[2024-06-20 16:02:16] 2024-06-20 20:01:54,863 | INFO     | model: linear, x: [1718847860.0, 1718847921.0, 1718847982.0, 1718848043.0, 1718848104.0, 1718848165.0, 1718848226.0, 1718848287.0, 1718848348.0, 1718848409.0, 1718
[2024-06-20 16:02:16] 2024-06-20 20:01:54,864 | INFO     | sum of square deviations: 389529605755.8218
[2024-06-20 16:02:16] 2024-06-20 20:01:54,953 | INFO     | sum of deviations: 3332781859142.412
[2024-06-20 16:02:16] 2024-06-20 20:01:54,954 | INFO     | mean x: 1718880739.2113068
[2024-06-20 16:02:16] 2024-06-20 20:01:54,954 | INFO     | mean y: 2439954.5245597777
[2024-06-20 16:02:16] 2024-06-20 20:01:54,954 | INFO     | -- intersect: -14704156055.18612
[2024-06-20 16:02:16] 2024-06-20 20:01:54,954 | INFO     | intersect: -14704156055.18612
[2024-06-20 16:02:16] 2024-06-20 20:01:54,955 | INFO     | chi2: 28.1749752746314
[2024-06-20 16:02:16] 2024-06-20 20:01:54,967 | INFO     | model: linear, x: [1718847860.0, 1718847921.0, 1718847982.0, 1718848043.0, 1718848104.0, 1718848165.0, 1718848226.0, 1718848287.0, 1718848348.0, 1718848409.0, 1718
[2024-06-20 16:02:16] 2024-06-20 20:01:54,967 | INFO     | sum of square deviations: 384139489930.52185
[2024-06-20 16:02:16] 2024-06-20 20:01:55,080 | INFO     | sum of deviations: 3540492765658.068
[2024-06-20 16:02:16] 2024-06-20 20:01:55,081 | INFO     | mean x: 1718880586.7113595
[2024-06-20 16:02:16] 2024-06-20 20:01:55,081 | INFO     | mean y: 2445819.3389199255
[2024-06-20 16:02:16] 2024-06-20 20:01:55,081 | INFO     | -- intersect: -15839935507.773174
[2024-06-20 16:02:16] 2024-06-20 20:01:55,081 | INFO     | intersect: -15839935507.773174
[2024-06-20 16:02:16] 2024-06-20 20:01:55,088 | INFO     | chi2: 25.84055728853433
[2024-06-20 16:02:16] 2024-06-20 20:01:55,088 | INFO     | current chi2=25.84055728853433 (change=8.285430469211331 %)
[2024-06-20 16:02:16] 2024-06-20 20:01:55,088 | INFO     | right removable region: 1073
[2024-06-20 16:02:16] 2024-06-20 20:01:55,089 | INFO     | model: linear, x: [1718848165.0, 1718848226.0, 1718848287.0, 1718848348.0, 1718848409.0, 1718848470.0, 1718848531.0, 1718848592.0, 1718848653.0, 1718848714.0, 1718
[2024-06-20 16:02:16] 2024-06-20 20:01:55,090 | INFO     | sum of square deviations: 384139416548.0976
[2024-06-20 16:02:16] 2024-06-20 20:01:55,127 | INFO     | monitor loop #4363: job 0:6238236791 is in state 'finished'
[2024-06-20 16:02:16] 2024-06-20 20:01:55,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:02:16] 2024-06-20 20:01:55,152 | INFO     | sum of deviations: 2949159891950.1245
[2024-06-20 16:02:16] 2024-06-20 20:01:55,153 | INFO     | mean x: 1718880891.7122905
[2024-06-20 16:02:16] 2024-06-20 20:01:55,153 | INFO     | mean y: 2450807.058659218
[2024-06-20 16:02:16] 2024-06-20 20:01:55,153 | INFO     | -- intersect: -13193941873.572796
[2024-06-20 16:02:16] 2024-06-20 20:01:55,153 | INFO     | intersect: -13193941873.572796
[2024-06-20 16:02:16] 2024-06-20 20:01:55,159 | INFO     | chi2: 23.10481423252333
[2024-06-20 16:02:16] 2024-06-20 20:01:55,159 | INFO     | current chi2=23.10481423252333 (change=17.995263501342677 %)
[2024-06-20 16:02:16] 2024-06-20 20:01:55,159 | INFO     | left removable region: 10
[2024-06-20 16:02:16] 2024-06-20 20:01:55,164 | INFO     | model: linear, x: [1718848470.0, 1718848531.0, 1718848592.0, 1718848653.0, 1718848714.0, 1718848775.0, 1718848836.0, 1718848897.0, 1718848958.0, 1718849019.0, 1718
[2024-06-20 16:02:16] 2024-06-20 20:01:55,164 | INFO     | sum of square deviations: 372456614166.5248
[2024-06-20 16:02:16] 2024-06-20 20:01:55,223 | INFO     | sum of deviations: 2812591357970.482
[2024-06-20 16:02:16] 2024-06-20 20:01:55,223 | INFO     | mean x: 1718880861.2135465
[2024-06-20 16:02:16] 2024-06-20 20:01:55,223 | INFO     | mean y: 2466511.7996237064
[2024-06-20 16:02:16] 2024-06-20 20:01:55,223 | INFO     | -- intersect: -12977594176.47313
[2024-06-20 16:02:16] 2024-06-20 20:01:55,223 | INFO     | intersect: -12977594176.47313
[2024-06-20 16:02:16] 2024-06-20 20:01:55,232 | INFO     | chi2: 16.81892085285996
[2024-06-20 16:02:16] 2024-06-20 20:01:55,232 | INFO     | -- intersect: -12977594176.47313
[2024-06-20 16:02:16] 2024-06-20 20:01:55,232 | INFO     | current memory leak: 7.55 B/s (using 1063 data points, chi2=16.82)
[2024-06-20 16:02:16] 2024-06-20 20:01:55,234 | INFO     | ..............................
[2024-06-20 16:02:16] 2024-06-20 20:01:55,234 | INFO     | . Timing measurements:
[2024-06-20 16:02:16] 2024-06-20 20:01:55,234 | INFO     | . get job = 0 s
[2024-06-20 16:02:16] 2024-06-20 20:01:55,235 | INFO     | . initial setup = 4 s
[2024-06-20 16:02:16] 2024-06-20 20:01:55,235 | INFO     | . payload setup = 80 s
[2024-06-20 16:02:16] 2024-06-20 20:01:55,235 | INFO     | . stage-in = 0 s
[2024-06-20 16:02:16] 2024-06-20 20:01:55,235 | INFO     | . payload execution = 65876 s
[2024-06-20 16:02:16] 2024-06-20 20:01:55,235 | INFO     | . stage-out = 6 s
[2024-06-20 16:02:16] 2024-06-20 20:01:55,235 | INFO     | . log creation = 2 s
[2024-06-20 16:02:16] 2024-06-20 20:01:55,235 | INFO     | ..............................
[2024-06-20 16:02:16] 2024-06-20 20:01:55,583 | INFO     | 
[2024-06-20 16:02:16] 2024-06-20 20:01:55,583 | INFO     | job summary report
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | --------------------------------------------------
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | PanDA job id: 6238236791
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | task id: 38921007
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | errors: (none)
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | pilot state: finished 
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | transexitcode: 0
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | exeerrorcode: 0
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | exeerrordiag: 
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | exitcode: 0
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | exitmsg: OK
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | cpuconsumptiontime: 165386 s
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | nevents: 400
[2024-06-20 16:02:16] 2024-06-20 20:01:55,584 | INFO     | neventsw: 0
[2024-06-20 16:02:16] 2024-06-20 20:01:55,585 | INFO     | pid: 222297
[2024-06-20 16:02:16] 2024-06-20 20:01:55,585 | INFO     | pgrp: 222297
[2024-06-20 16:02:16] 2024-06-20 20:01:55,585 | INFO     | corecount: 8
[2024-06-20 16:02:16] 2024-06-20 20:01:55,585 | INFO     | event service: False
[2024-06-20 16:02:16] 2024-06-20 20:01:55,585 | INFO     | sizes: {0: 2385047, 1: 2385246, 12: 2385246, 23: 2385274, 34: 2385302, 44: 2385302, 45: 2385664, 55: 2385692, 65960: 2439971, 65968: 2448987, 66026: 2449101}
[2024-06-20 16:02:16] 2024-06-20 20:01:55,585 | INFO     | --------------------------------------------------
[2024-06-20 16:02:16] 2024-06-20 20:01:55,585 | INFO     | 
[2024-06-20 16:02:16] 2024-06-20 20:01:55,585 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-20 16:02:16] 2024-06-20 20:01:55,885 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 16:02:16] 2024-06-20 20:01:55,887 | INFO     | job 6238236791 has completed (purged errors)
[2024-06-20 16:02:16] 2024-06-20 20:01:55,888 | INFO     | overall cleanup function is called
[2024-06-20 16:02:16] 2024-06-20 20:01:56,904 | INFO     | --- collectZombieJob: --- 10, [222297]
[2024-06-20 16:02:16] 2024-06-20 20:01:56,905 | INFO     | zombie collector waiting for pid 222297
[2024-06-20 16:02:16] 2024-06-20 20:01:56,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 16:02:16] 2024-06-20 20:01:57,910 | INFO     | collected zombie processes
[2024-06-20 16:02:16] 2024-06-20 20:01:57,911 | INFO     | will now attempt to kill all subprocesses of pid=222297
[2024-06-20 16:02:16] 2024-06-20 20:01:58,488 | INFO     | process IDs to be killed: [222297] (in reverse order)
[2024-06-20 16:02:16] 2024-06-20 20:01:58,997 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 16:02:16] 2024-06-20 20:01:59,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 16:02:16] 2024-06-20 20:01:59,027 | INFO     | did not find any defunct processes belonging to 222297
[2024-06-20 16:02:16] 2024-06-20 20:01:59,048 | INFO     | did not find any defunct processes belonging to 222297
[2024-06-20 16:02:16] 2024-06-20 20:01:59,048 | INFO     | ready for new job
[2024-06-20 16:02:16] 2024-06-20 20:01:59,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 16:02:16] 2024-06-20 20:01:59,061 | INFO     | *************************************
[2024-06-20 16:02:16] 2024-06-20 20:01:59,061 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 16:02:16] 2024-06-20 20:01:59,061 | INFO     | *************************************
[2024-06-20 16:02:16] 2024-06-20 20:01:59,061 | INFO     | 
[2024-06-20 16:02:16] 2024-06-20 20:01:59,068 | INFO     | architecture information:
[2024-06-20 16:02:16] 2024-06-20 20:01:59,079 | INFO     | executing command: cat /etc/os-release
[2024-06-20 16:02:16] 2024-06-20 20:01:59,264 | INFO     | cat /etc/os-release:
[2024-06-20 16:02:16] NAME="CentOS Linux"
[2024-06-20 16:02:16] VERSION="7 (Core)"
[2024-06-20 16:02:16] ID="centos"
[2024-06-20 16:02:16] ID_LIKE="rhel fedora"
[2024-06-20 16:02:16] VERSION_ID="7"
[2024-06-20 16:02:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 16:02:16] ANSI_COLOR="0;31"
[2024-06-20 16:02:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 16:02:16] HOME_URL="https://www.centos.org/"
[2024-06-20 16:02:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 16:02:16] 
[2024-06-20 16:02:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 16:02:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 16:02:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 16:02:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 16:02:16] 
[2024-06-20 16:02:16] 2024-06-20 20:01:59,264 | INFO     | *************************************
[2024-06-20 16:02:16] 2024-06-20 20:01:59,768 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-20 16:02:16] 2024-06-20 20:02:00,138 | INFO     | sufficient remaining disk space (99064217600 B)
[2024-06-20 16:02:16] 2024-06-20 20:02:00,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 16:02:16] 2024-06-20 20:02:00,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 16:02:16] 2024-06-20 20:02:00,152 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-20 16:02:16] 2024-06-20 20:02:00,153 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-20 16:02:16] 2024-06-20 20:02:00,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 16:02:16] 2024-06-20 20:02:00,153 | INFO     | will abort loop
[2024-06-20 16:02:16] 2024-06-20 20:02:00,157 | INFO     | all payload control threads have been joined
[2024-06-20 16:02:16] 2024-06-20 20:02:00,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 16:02:16] 2024-06-20 20:02:00,639 | INFO     | all data control threads have been joined
[2024-06-20 16:02:16] 2024-06-20 20:02:00,877 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 16:02:16] 2024-06-20 20:02:00,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 16:02:16] 2024-06-20 20:02:00,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 16:02:16] 2024-06-20 20:02:01,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 16:02:16] 2024-06-20 20:02:01,144 | INFO     | [job] retrieve thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:01,163 | INFO     | [payload] control thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:01,163 | INFO     | [job] job monitor thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:01,579 | INFO     | all job control threads have been joined
[2024-06-20 16:02:16] 2024-06-20 20:02:01,602 | INFO     | [job] queue monitor thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:01,645 | INFO     | [data] control thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:01,994 | INFO     | [payload] failed_post thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:01,998 | INFO     | [payload] validate_post thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:02,414 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:02,415 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:02,456 | INFO     | [job] validate thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:02,457 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:02,457 | INFO     | [data] copytool_in thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:02,534 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:02,585 | INFO     | [job] control thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:02,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 16:02:16] 2024-06-20 20:02:03,016 | INFO     | [data] copytool_out thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:06,778 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 16:02:16] 2024-06-20 20:02:08,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497415153472)>', '<ExcThread(monitor, started 140496752072448)>']
[2024-06-20 16:02:16] 2024-06-20 20:02:08,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 16:02:16] 2024-06-20 20:02:08,943 | INFO     | [monitor] control thread has ended
[2024-06-20 16:02:16] 2024-06-20 20:02:13,148 | INFO     | all workflow threads have been joined
[2024-06-20 16:02:16] 2024-06-20 20:02:13,149 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 16:02:16] 2024-06-20 20:02:13,149 | INFO     | traces error code: 0
[2024-06-20 16:02:16] 2024-06-20 20:02:13,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 16:02:16] 2024-06-20 20:02:13,628 [wrapper] ==== pilot stdout END ====
[2024-06-20 16:02:16] 2024-06-20 20:02:13,664 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 16:02:16] 2024-06-20 20:02:13,700 [wrapper] pilotpid: 188172
[2024-06-20 16:02:16] 2024-06-20 20:02:13,739 [wrapper] Pilot exit status: 0
[2024-06-20 16:02:16] 2024-06-20 20:02:13,888 [wrapper] pandaids: 6238236791
[2024-06-20 16:02:16] 2024-06-20 20:02:14,827 [wrapper] cleanup supervisor_pilot  53722 188173
[2024-06-20 16:02:16] 2024-06-20 20:02:14,840 [wrapper] Test setup, not cleaning
[2024-06-20 16:02:16] 2024-06-20 20:02:14,874 [wrapper] ==== wrapper stdout END ====
[2024-06-20 16:02:16] 2024-06-20 20:02:14,895 [wrapper] ==== wrapper stderr END ====
[2024-06-20 16:02:16] 2024-06-20 20:02:14,919 [wrapper] apfmon messages muted
[2024-06-20 16:02:16]  *** Error codes and diagnostics ***
[2024-06-20 16:02:16]     "exeErrorCode": 0,
[2024-06-20 16:02:16]     "exeErrorDiag": "",
[2024-06-20 16:02:16]     "pilotErrorCode": 0,
[2024-06-20 16:02:16]     "pilotErrorDiag": "",
[2024-06-20 16:02:16]  *** Listing of results directory ***
[2024-06-20 16:02:16] total 937700
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas    469766 Jun 19 14:53 pilot3.tar.gz
[2024-06-20 16:02:16] -rwx------ 1 boincer umatlas     32308 Jun 19 15:02 runpilot2-wrapper.sh
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas      5654 Jun 19 15:02 queuedata.json
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas       100 Jun 19 21:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 16:02:16] -rwxr-xr-x 1 boincer umatlas      7986 Jun 19 21:37 run_atlas
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas       105 Jun 19 21:37 job.xml
[2024-06-20 16:02:16] -rw-r--r-- 2 boincer umatlas 584126354 Jun 19 21:37 EVNT.38776201._000693.pool.root.1
[2024-06-20 16:02:16] -rw-r--r-- 2 boincer umatlas     17537 Jun 19 21:37 start_atlas.sh
[2024-06-20 16:02:16] drwxrwx--x 2 boincer umatlas      4096 Jun 19 21:37 shared
[2024-06-20 16:02:16] -rw-r--r-- 2 boincer umatlas    482533 Jun 19 21:37 input.tar.gz
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas         0 Jun 19 21:37 boinc_lockfile
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas      2630 Jun 19 21:38 pandaJob.out
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas       467 Jun 19 21:38 setup.sh.local
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas   1021700 Jun 19 21:39 agis_schedconf.cvmfs.json
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas   1320365 Jun 19 21:39 cric_ddmendpoints.json
[2024-06-20 16:02:16] drwx------ 4 boincer umatlas      4096 Jun 19 21:39 pilot3
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas 356709198 Jun 20 15:57 HITS.38921007._050017.pool.root.1
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas       533 Jun 20 15:57 boinc_task_state.xml
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas      1070 Jun 20 16:00 memory_monitor_summary.json
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas         0 Jun 20 16:00 agis_ddmendpoints.agis.ALL.json
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas      6385 Jun 20 16:00 init_data.xml
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas    971701 Jun 20 16:00 log.38921007._050017.job.log.tgz.1
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas        95 Jun 20 16:01 pilot_heartbeat.json
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas      7794 Jun 20 16:01 heartbeat.json
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas      4397 Jun 20 16:02 pilotlog.txt
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas   6945893 Jun 20 16:02 log.38921007._050017.job.log.1
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas      8192 Jun 20 16:02 boinc_mmap_file
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas        29 Jun 20 16:02 wrapper_checkpoint.txt
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas       357 Jun 20 16:02 output.list
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas       620 Jun 20 16:02 runtime_log
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas   7936000 Jun 20 16:02 result.tar.gz
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas     11415 Jun 20 16:02 runtime_log.err
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas       655 Jun 20 16:02 d18KDmClFe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmwtWKDmb9ZDNo.diag
[2024-06-20 16:02:16] -rw-r--r-- 1 boincer umatlas     21896 Jun 20 16:02 stderr.txt
[2024-06-20 16:02:16] HITS file was successfully produced:
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas 356709198 Jun 20 15:57 shared/HITS.pool.root.1
[2024-06-20 16:02:16]  *** Contents of shared directory: ***
[2024-06-20 16:02:16] total 927040
[2024-06-20 16:02:16] -rw-r--r-- 2 boincer umatlas 584126354 Jun 19 21:37 ATLAS.root_0
[2024-06-20 16:02:16] -rw-r--r-- 2 boincer umatlas     17537 Jun 19 21:37 start_atlas.sh
[2024-06-20 16:02:16] -rw-r--r-- 2 boincer umatlas    482533 Jun 19 21:37 input.tar.gz
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas 356709198 Jun 20 15:57 HITS.pool.root.1
[2024-06-20 16:02:16] -rw------- 1 boincer umatlas   7936000 Jun 20 16:02 result.tar.gz
16:02:17 (164897): run_atlas exited; CPU time 164374.458412
16:02:17 (164897): called boinc_finish(0)

</stderr_txt>
]]>

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