Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-21 02:43:42 (3898291): Detected: vboxwrapper 26206
2024-06-21 02:43:42 (3898291): Detected: BOINC client v7.16.6
2024-06-21 02:43:42 (3898291): Detected: VirtualBox VboxManage Interface (Version: 6.1.38)
2024-06-21 02:43:42 (3898291): Successfully copied 'init_data.xml' to the shared directory.
2024-06-21 02:43:42 (3898291): Create VM. (boinc_a5218c083e39700c, slot#2)
2024-06-21 02:43:42 (3898291): Setting Memory Size for VM. (4300MB)
2024-06-21 02:43:42 (3898291): Setting CPU Count for VM. (3)
2024-06-21 02:43:42 (3898291): Setting Chipset Options for VM.
2024-06-21 02:43:42 (3898291): Setting Graphics Controller Options for VM.
2024-06-21 02:43:42 (3898291): Setting Boot Options for VM.
2024-06-21 02:43:42 (3898291): Setting Network Configuration for NAT.
2024-06-21 02:43:42 (3898291): Enabling VM Network Access.
2024-06-21 02:43:42 (3898291): Disabling USB Support for VM.
2024-06-21 02:43:42 (3898291): Disabling COM Port Support for VM.
2024-06-21 02:43:42 (3898291): Disabling LPT Port Support for VM.
2024-06-21 02:43:42 (3898291): Disabling Audio Support for VM.
2024-06-21 02:43:42 (3898291): Disabling Clipboard Support for VM.
2024-06-21 02:43:42 (3898291): Disabling Drag and Drop Support for VM.
2024-06-21 02:43:42 (3898291): Adding storage controller(s) to VM.
2024-06-21 02:43:42 (3898291): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-21 02:43:43 (3898291): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-21 02:43:43 (3898291): forwarding host port 45939 to guest port 80
2024-06-21 02:43:43 (3898291): Enabling remote desktop for VM.
2024-06-21 02:43:43 (3898291): Enabling shared directory for VM.
2024-06-21 02:43:43 (3898291): Starting VM using VBoxManage interface. (boinc_a5218c083e39700c, slot#2)
2024-06-21 02:43:44 (3898291): Successfully started VM. (PID = '3898680')
2024-06-21 02:43:44 (3898291): Reporting VM Process ID to BOINC.
2024-06-21 02:43:44 (3898291): Guest Log: BIOS: VirtualBox 6.1.38
2024-06-21 02:43:44 (3898291): Guest Log: CPUID EDX: 0x178bfbff
2024-06-21 02:43:44 (3898291): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-21 02:43:44 (3898291): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-21 02:43:44 (3898291): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-21 02:43:44 (3898291): Detected: Web Application Enabled (http://localhost:45939)
2024-06-21 02:43:44 (3898291): Detected: Remote Desktop Enabled (localhost:46491)
2024-06-21 02:43:44 (3898291): Preference change detected
2024-06-21 02:43:44 (3898291): Setting CPU throttle for VM. (90%)
2024-06-21 02:43:44 (3898291): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-21 02:43:46 (3898291): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-21 02:43:46 (3898291): Guest Log: BIOS: Booting from Hard Disk...
2024-06-21 02:43:49 (3898291): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-21 02:43:49 (3898291): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-21 02:43:49 (3898291): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-21 02:43:55 (3898291): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-21 02:43:55 (3898291): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-21 02:44:03 (3898291): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-21 02:44:03 (3898291): Guest Log: 00:00:00.000250 main     Log opened 2024-06-21T06:44:01.619761000Z
2024-06-21 02:44:03 (3898291): Guest Log: 00:00:00.000388 main     OS Product: Linux
2024-06-21 02:44:03 (3898291): Guest Log: 00:00:00.000438 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-21 02:44:03 (3898291): Guest Log: 00:00:00.000480 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-21 02:44:03 (3898291): Guest Log: 00:00:00.000521 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-21 02:44:03 (3898291): Guest Log: 00:00:00.000522 main     Process ID: 1276
2024-06-21 02:44:03 (3898291): Guest Log: 00:00:00.000523 main     Package type: LINUX_64BITS_GENERIC
2024-06-21 02:44:03 (3898291): Guest Log: 00:00:00.002300 main     5.2.32 r132073 started. Verbose level = 0
2024-06-21 02:44:03 (3898291): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-21 02:44:03 (3898291): Guest Log: [INFO] Mounting shared directory
2024-06-21 02:44:03 (3898291): Guest Log: [INFO] Checking for init_data.xml
2024-06-21 02:44:59 (3898291): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-21 02:44:59 (3898291): Guest Log: [INFO] Detected branch: prod
2024-06-21 02:44:59 (3898291): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-21 02:44:59 (3898291): Guest Log: Copying input files
2024-06-21 02:45:01 (3898291): Guest Log: Copied input files into RunAtlas.
2024-06-21 02:45:02 (3898291): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-21 02:45:02 (3898291): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-21 02:45:02 (3898291): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-21 02:45:02 (3898291): Guest Log: Further information can be found at the LHC@home message board.
2024-06-21 02:45:11 (3898291): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-21 02:45:11 (3898291): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-21 02:45:11 (3898291): Guest Log: 2.6.3.0 1567 0 30184 134116 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2024-06-21 02:45:12 (3898291): Guest Log: copied the webapp to /var/www
2024-06-21 02:45:12 (3898291): Guest Log: ATHENA_PROC_NUMBER=3
2024-06-21 02:45:12 (3898291): Guest Log: ATHENA_CORE_NUMBER=3
2024-06-21 02:45:13 (3898291): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-21 02:45:13 (3898291): Guest Log:  *** Starting ATLAS job. (PandaID=6238223205 taskID=38921007) ***
2024-06-21 04:22:45 (3898291): Status Report: Elapsed Time: '6000.000000'
2024-06-21 04:22:45 (3898291): Status Report: CPU Time: '11153.950000'
2024-06-21 06:01:45 (3898291): Status Report: Elapsed Time: '12000.000000'
2024-06-21 06:01:45 (3898291): Status Report: CPU Time: '27775.870000'
2024-06-21 07:40:45 (3898291): Status Report: Elapsed Time: '18000.000000'
2024-06-21 07:40:45 (3898291): Status Report: CPU Time: '44413.670000'
2024-06-21 09:19:46 (3898291): Status Report: Elapsed Time: '24000.000000'
2024-06-21 09:19:46 (3898291): Status Report: CPU Time: '61047.140000'
2024-06-21 10:58:46 (3898291): Status Report: Elapsed Time: '30000.000000'
2024-06-21 10:58:46 (3898291): Status Report: CPU Time: '77679.240000'
2024-06-21 12:37:47 (3898291): Status Report: Elapsed Time: '36000.000000'
2024-06-21 12:37:47 (3898291): Status Report: CPU Time: '94311.000000'
2024-06-21 14:16:47 (3898291): Status Report: Elapsed Time: '42000.000000'
2024-06-21 14:16:47 (3898291): Status Report: CPU Time: '110953.270000'
2024-06-21 15:55:47 (3898291): Status Report: Elapsed Time: '48000.000000'
2024-06-21 15:55:47 (3898291): Status Report: CPU Time: '127595.710000'
2024-06-21 17:07:08 (3898291): Guest Log:  *** Job finished ***
2024-06-21 17:07:08 (3898291): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:06:50,617 | INFO     | [data] queue_monitor thread has finished
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:06:56,703 | INFO     | job.realtimelogging is not enabled
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:06:57,704 | INFO     | [payload] run_realtimelog thread has finished
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:06:58,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814861211456)>', '<ExcThread(monitor, started 139814556899072)>']
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:06:58,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:06:58,626 | INFO     | [monitor] control thread has ended
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:03,505 | INFO     | all workflow threads have been joined
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:03,506 | INFO     | end of generic workflow (traces error code: 0)
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:03,506 | INFO     | traces error code: 0
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:03,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:03,591 [wrapper] ==== pilot stdout END ====
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:03,599 [wrapper] ==== wrapper stdout RESUME ====
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:03,606 [wrapper] pilotpid: 6457
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:03,613 [wrapper] Pilot exit status: 0
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:05,893 [wrapper] pandaids: 6238223205
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:05,936 [wrapper] cleanup supervisor_pilot  6652 6458
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:05,942 [wrapper] Test setup, not cleaning
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:05,949 [wrapper] ==== wrapper stdout END ====
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:05,955 [wrapper] ==== wrapper stderr END ====
2024-06-21 17:07:08 (3898291): Guest Log: 2024-06-21 21:07:05,967 [wrapper] apfmon messages muted
2024-06-21 17:07:08 (3898291): Guest Log:  *** Error codes and diagnostics ***
2024-06-21 17:07:08 (3898291): Guest Log:     "exeErrorCode": 0,
2024-06-21 17:07:08 (3898291): Guest Log:     "exeErrorDiag": "",
2024-06-21 17:07:08 (3898291): Guest Log:     "pilotErrorCode": 0,
2024-06-21 17:07:08 (3898291): Guest Log:     "pilotErrorDiag": "",
2024-06-21 17:07:08 (3898291): Guest Log:  *** Listing of results directory ***
2024-06-21 17:07:08 (3898291): Guest Log: total 360692
2024-06-21 17:07:08 (3898291): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 19 18:40 runpilot2-wrapper.sh
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 19 18:40 queuedata.json
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 19 18:40 pilot3.tar.gz
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 21 06:44 start_atlas.sh
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 atlas atlas      8775 Jun 21 06:45 init_data.xml
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 atlas atlas    482518 Jun 21 06:45 input.tar.gz
2024-06-21 17:07:08 (3898291): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 21 06:45 EVNT.38776201._000985.pool.root.1 -> /data/./ATLAS.root_0
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 atlas atlas      2630 Jun 21 06:45 pandaJob.out
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas       424 Jun 21 06:45 setup.sh.local
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas   1023400 Jun 21 06:49 agis_schedconf.cvmfs.json
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas   1321251 Jun 21 06:49 cric_ddmendpoints.json
2024-06-21 17:07:08 (3898291): Guest Log: drwx------. 4 atlas atlas      4096 Jun 21 06:49 pilot3
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas 353840819 Jun 21 21:04 HITS.38921007._049992.pool.root.1
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas      1030 Jun 21 21:05 memory_monitor_summary.json
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas         0 Jun 21 21:05 agis_ddmendpoints.agis.ALL.json
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas    647637 Jun 21 21:05 log.38921007._049992.job.log.tgz.1
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas        95 Jun 21 21:06 pilot_heartbeat.json
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas      7749 Jun 21 21:06 heartbeat.json
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 21 21:07 pilotlog.txt
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas   5371762 Jun 21 21:07 log.38921007._049992.job.log.1
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas       357 Jun 21 21:07 output.list
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 21 21:07 runtime_log
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas   6041600 Jun 21 21:07 result.tar.gz
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 atlas atlas     10913 Jun 21 21:07 runtime_log.err
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas       645 Jun 21 21:07 8V9NDm9OFe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm4sWKDmxlHqRm.diag
2024-06-21 17:07:08 (3898291): Guest Log: Looking for outputfile HITS.38921007._049992.pool.root.1
2024-06-21 17:07:08 (3898291): Guest Log: HITS file was successfully produced
2024-06-21 17:07:08 (3898291): Guest Log: -rw-------. 1 atlas atlas 353840819 Jun 21 21:04 /home/atlas/RunAtlas/HITS.38921007._049992.pool.root.1
2024-06-21 17:07:08 (3898291): Guest Log: Successfully finished the ATLAS job!
2024-06-21 17:07:08 (3898291): Guest Log: Copying the results back to the shared directory!
2024-06-21 17:07:08 (3898291): Guest Log:  *** Contents of shared directory: ***
2024-06-21 17:07:08 (3898291): Guest Log: total 578264
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 root root 585577054 Jun 21 06:43 ATLAS.root_0
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 root root      8775 Jun 21 06:43 init_data.xml
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 root root    482518 Jun 21 06:43 input.tar.gz
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 root root   6041600 Jun 21 21:07 result.tar.gz
2024-06-21 17:07:08 (3898291): Guest Log: -rw-r--r--. 1 root root     17537 Jun 21 06:43 start_atlas.sh
2024-06-21 17:07:08 (3898291): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-21 17:07:08 (3898291): VM Completion File Detected.
2024-06-21 17:07:08 (3898291): Powering off VM.
2024-06-21 17:07:08 (3898291): Successfully stopped VM.
2024-06-21 17:07:08 (3898291): Deregistering VM. (boinc_a5218c083e39700c, slot#2)
2024-06-21 17:07:08 (3898291): Removing network bandwidth throttle group from VM.
2024-06-21 17:07:08 (3898291): Removing VM from VirtualBox.
17:07:13 (3898291): called boinc_finish(0)

</stderr_txt>
]]>

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