Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
08:42:29 (83742): wrapper (7.7.26015): starting
08:42:29 (83742): wrapper: running run_atlas (--nthreads 12)
[2024-06-20 08:42:29] Arguments: --nthreads 12
[2024-06-20 08:42:29] Threads: 12
[2024-06-20 08:42:29] Checking for CVMFS
[2024-06-20 08:42:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 08:42:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 08:42:30] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 08:42:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 08:42:30] 2.10.1.0 202352 232630 109864 134090 3 103 26883199 45568001 10012 130560 0 1467960577 99.763 898384420 17335 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-20 08:42:30] CVMFS is ok
[2024-06-20 08:42:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 08:42:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 08:42:30] Further information can be found at the LHC@home message board.
[2024-06-20 08:42:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 08:42:30] Checking for apptainer binary...
[2024-06-20 08:42:30] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 08:42:30] Running /usr/bin/apptainer --version
[2024-06-20 08:42:30] apptainer version 1.3.2-1.el7
[2024-06-20 08:42:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 08:42:31] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0067.triumf.lcg
[2024-06-20 08:42:31] apptainer works
[2024-06-20 08:42:31] Set ATHENA_PROC_NUMBER=12
[2024-06-20 08:42:31] Set ATHENA_CORE_NUMBER=12
[2024-06-20 08:42:31] Starting ATLAS job with PandaID=6238222129
[2024-06-20 08:42:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 19:18:14]  *** The last 200 lines of the pilot log: ***
[2024-06-20 19:18:14] 2024-06-21 02:17:53,472 | INFO     | sum of square deviations: 73909574609.7351
[2024-06-20 19:18:14] 2024-06-21 02:17:53,477 | INFO     | sum of deviations: 663043511360.8485
[2024-06-20 19:18:14] 2024-06-21 02:17:53,477 | INFO     | mean x: 1718917063.5451612
[2024-06-20 19:18:14] 2024-06-21 02:17:53,477 | INFO     | mean y: 2686295.166129032
[2024-06-20 19:18:14] 2024-06-21 02:17:53,477 | INFO     | -- intersect: -15417735369.673801
[2024-06-20 19:18:14] 2024-06-21 02:17:53,477 | INFO     | intersect: -15417735369.673801
[2024-06-20 19:18:14] 2024-06-21 02:17:53,478 | INFO     | chi2: 5.588568910706906
[2024-06-20 19:18:14] 2024-06-21 02:17:53,478 | INFO     | current chi2=5.588568910706906 (change=12.214007289620742 %)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,478 | INFO     | right removable region: 619
[2024-06-20 19:18:14] 2024-06-21 02:17:53,478 | INFO     | model: linear, x: [1718898487.0, 1718898548.0, 1718898609.0, 1718898670.0, 1718898731.0, 1718898792.0, 1718898853.0, 1718898914.0, 1718898975.0, 1718899037.0, 1718
[2024-06-20 19:18:14] 2024-06-21 02:17:53,478 | INFO     | sum of square deviations: 73908838397.64346
[2024-06-20 19:18:14] 2024-06-21 02:17:53,483 | INFO     | sum of deviations: 441280797669.26355
[2024-06-20 19:18:14] 2024-06-21 02:17:53,484 | INFO     | mean x: 1718917368.5467741
[2024-06-20 19:18:14] 2024-06-21 02:17:53,484 | INFO     | mean y: 2698232.456451613
[2024-06-20 19:18:14] 2024-06-21 02:17:53,484 | INFO     | -- intersect: -10260285789.006088
[2024-06-20 19:18:14] 2024-06-21 02:17:53,484 | INFO     | intersect: -10260285789.006088
[2024-06-20 19:18:14] 2024-06-21 02:17:53,484 | INFO     | chi2: 3.679543844871902
[2024-06-20 19:18:14] 2024-06-21 02:17:53,484 | INFO     | current chi2=3.679543844871902 (change=42.201229992064754 %)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,485 | INFO     | model: linear, x: [1718898792.0, 1718898853.0, 1718898914.0, 1718898975.0, 1718899037.0, 1718899097.0, 1718899159.0, 1718899220.0, 1718899281.0, 1718899344.0, 1718
[2024-06-20 19:18:14] 2024-06-21 02:17:53,485 | INFO     | sum of square deviations: 72134892496.52689
[2024-06-20 19:18:14] 2024-06-21 02:17:53,490 | INFO     | sum of deviations: 295155390288.67773
[2024-06-20 19:18:14] 2024-06-21 02:17:53,490 | INFO     | mean x: 1718917521.0634146
[2024-06-20 19:18:14] 2024-06-21 02:17:53,490 | INFO     | mean y: 2710799.905691057
[2024-06-20 19:18:14] 2024-06-21 02:17:53,490 | INFO     | -- intersect: -7030609057.442763
[2024-06-20 19:18:14] 2024-06-21 02:17:53,490 | INFO     | intersect: -7030609057.442763
[2024-06-20 19:18:14] 2024-06-21 02:17:53,490 | INFO     | chi2: 2.0601631637072844
[2024-06-20 19:18:14] 2024-06-21 02:17:53,490 | INFO     | current chi2=2.0601631637072844 (change=44.0103651277729 %)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,491 | INFO     | model: linear, x: [1718899097.0, 1718899159.0, 1718899220.0, 1718899281.0, 1718899344.0, 1718899403.0, 1718899465.0, 1718899526.0, 1718899585.0, 1718899647.0, 1718
[2024-06-20 19:18:14] 2024-06-21 02:17:53,491 | INFO     | sum of square deviations: 70389589056.72256
[2024-06-20 19:18:14] 2024-06-21 02:17:53,505 | INFO     | sum of deviations: 187422551231.95917
[2024-06-20 19:18:14] 2024-06-21 02:17:53,506 | INFO     | mean x: 1718917673.5786886
[2024-06-20 19:18:14] 2024-06-21 02:17:53,506 | INFO     | mean y: 2720197.073770492
[2024-06-20 19:18:14] 2024-06-21 02:17:53,506 | INFO     | -- intersect: -4574148911.797005
[2024-06-20 19:18:14] 2024-06-21 02:17:53,506 | INFO     | intersect: -4574148911.797005
[2024-06-20 19:18:14] 2024-06-21 02:17:53,506 | INFO     | chi2: 1.051247397211217
[2024-06-20 19:18:14] 2024-06-21 02:17:53,506 | INFO     | current chi2=1.051247397211217 (change=48.97261460983087 %)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,507 | INFO     | model: linear, x: [1718899403.0, 1718899465.0, 1718899526.0, 1718899585.0, 1718899647.0, 1718899707.0, 1718899772.0, 1718899834.0, 1718899892.0, 1718899953.0, 1718
[2024-06-20 19:18:14] 2024-06-21 02:17:53,507 | INFO     | sum of square deviations: 68672843813.53069
[2024-06-20 19:18:14] 2024-06-21 02:17:53,512 | INFO     | sum of deviations: 138283659712.91898
[2024-06-20 19:18:14] 2024-06-21 02:17:53,512 | INFO     | mean x: 1718917826.0859504
[2024-06-20 19:18:14] 2024-06-21 02:17:53,512 | INFO     | mean y: 2724562.3669421487
[2024-06-20 19:18:14] 2024-06-21 02:17:53,512 | INFO     | -- intersect: -3458589030.2719293
[2024-06-20 19:18:14] 2024-06-21 02:17:53,512 | INFO     | intersect: -3458589030.2719293
[2024-06-20 19:18:14] 2024-06-21 02:17:53,512 | INFO     | chi2: 0.8891889817346257
[2024-06-20 19:18:14] 2024-06-21 02:17:53,512 | INFO     | current chi2=0.8891889817346257 (change=15.415820853065146 %)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,512 | INFO     | left removable region: 40
[2024-06-20 19:18:14] 2024-06-21 02:17:53,513 | INFO     | model: linear, x: [1718900622.0, 1718900683.0, 1718900745.0, 1718900810.0, 1718900868.0, 1718900927.0, 1718900988.0, 1718901050.0, 1718901110.0, 1718901171.0, 1718
[2024-06-20 19:18:14] 2024-06-21 02:17:53,513 | INFO     | sum of square deviations: 60194761913.28567
[2024-06-20 19:18:14] 2024-06-21 02:17:53,517 | INFO     | sum of deviations: 122931906250.18146
[2024-06-20 19:18:14] 2024-06-21 02:17:53,518 | INFO     | mean x: 1718918253.1295338
[2024-06-20 19:18:14] 2024-06-21 02:17:53,518 | INFO     | mean y: 2733809.2642487045
[2024-06-20 19:18:14] 2024-06-21 02:17:53,518 | INFO     | -- intersect: -3507702827.229981
[2024-06-20 19:18:14] 2024-06-21 02:17:53,518 | INFO     | intersect: -3507702827.229981
[2024-06-20 19:18:14] 2024-06-21 02:17:53,518 | INFO     | chi2: 0.011335819924217448
[2024-06-20 19:18:14] 2024-06-21 02:17:53,518 | INFO     | -- intersect: -3507702827.229981
[2024-06-20 19:18:14] 2024-06-21 02:17:53,518 | INFO     | current memory leak: 2.04 B/s (using 579 data points, chi2=0.01)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | ..............................
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | . Timing measurements:
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | . get job = 0 s
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | . initial setup = 2 s
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | . payload setup = 4 s
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | . stage-in = 0 s
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | . payload execution = 38083 s
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | . stage-out = 1 s
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | . log creation = 0 s
[2024-06-20 19:18:14] 2024-06-21 02:17:53,519 | INFO     | ..............................
[2024-06-20 19:18:14] 2024-06-21 02:17:53,589 | INFO     | 
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | job summary report
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | --------------------------------------------------
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | PanDA job id: 6238222129
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | task id: 38921013
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | errors: (none)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | pilot state: finished 
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | transexitcode: 0
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | exeerrorcode: 0
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | exeerrordiag: 
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | exitcode: 0
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | exitmsg: OK
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | cpuconsumptiontime: 108560 s
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | nevents: 400
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | neventsw: 0
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | pid: 94361
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | pgrp: 94361
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | corecount: 12
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | event service: False
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | sizes: {0: 2387062, 3: 2387268, 11: 2387296, 38090: 2427635, 38092: 2436589, 38094: 2436645, 38099: 2436943}
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | --------------------------------------------------
[2024-06-20 19:18:14] 2024-06-21 02:17:53,590 | INFO     | 
[2024-06-20 19:18:14] 2024-06-21 02:17:53,591 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-20 19:18:14] 2024-06-21 02:17:53,683 | WARNING  | process 94361 is no longer using CPU - aborting
[2024-06-20 19:18:14] 2024-06-21 02:17:53,683 | INFO     | aborting job monitoring since job object (job id=6238222129) has expired
[2024-06-20 19:18:14] 2024-06-21 02:17:53,702 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,702 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,702 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,702 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | job 6238222129 has completed (purged errors)
[2024-06-20 19:18:14] 2024-06-21 02:17:53,703 | INFO     | overall cleanup function is called
[2024-06-20 19:18:14] 2024-06-21 02:17:54,721 | INFO     | --- collectZombieJob: --- 10, [94361]
[2024-06-20 19:18:14] 2024-06-21 02:17:54,721 | INFO     | zombie collector waiting for pid 94361
[2024-06-20 19:18:14] 2024-06-21 02:17:54,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 19:18:14] 2024-06-21 02:17:55,727 | INFO     | collected zombie processes
[2024-06-20 19:18:14] 2024-06-21 02:17:55,727 | INFO     | will now attempt to kill all subprocesses of pid=94361
[2024-06-20 19:18:14] 2024-06-21 02:17:55,836 | INFO     | process IDs to be killed: [94361] (in reverse order)
[2024-06-20 19:18:14] 2024-06-21 02:17:55,908 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 19:18:14] 2024-06-21 02:17:55,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 19:18:14] 2024-06-21 02:17:55,914 | INFO     | did not find any defunct processes belonging to 94361
[2024-06-20 19:18:14] 2024-06-21 02:17:55,918 | INFO     | did not find any defunct processes belonging to 94361
[2024-06-20 19:18:14] 2024-06-21 02:17:55,919 | INFO     | ready for new job
[2024-06-20 19:18:14] 2024-06-21 02:17:55,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 19:18:14] 2024-06-21 02:17:55,921 | INFO     | *************************************
[2024-06-20 19:18:14] 2024-06-21 02:17:55,922 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 19:18:14] 2024-06-21 02:17:55,922 | INFO     | *************************************
[2024-06-20 19:18:14] 2024-06-21 02:17:55,922 | INFO     | 
[2024-06-20 19:18:14] 2024-06-21 02:17:55,924 | INFO     | architecture information:
[2024-06-20 19:18:14] 2024-06-21 02:17:55,924 | INFO     | executing command: cat /etc/os-release
[2024-06-20 19:18:14] 2024-06-21 02:17:55,940 | INFO     | cat /etc/os-release:
[2024-06-20 19:18:14] NAME="CentOS Linux"
[2024-06-20 19:18:14] VERSION="7 (Core)"
[2024-06-20 19:18:14] ID="centos"
[2024-06-20 19:18:14] ID_LIKE="rhel fedora"
[2024-06-20 19:18:14] VERSION_ID="7"
[2024-06-20 19:18:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 19:18:14] ANSI_COLOR="0;31"
[2024-06-20 19:18:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 19:18:14] HOME_URL="https://www.centos.org/"
[2024-06-20 19:18:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 19:18:14] 
[2024-06-20 19:18:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 19:18:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 19:18:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 19:18:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 19:18:14] 
[2024-06-20 19:18:14] 2024-06-21 02:17:55,941 | INFO     | *************************************
[2024-06-20 19:18:14] 2024-06-21 02:17:56,443 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-20 19:18:14] 2024-06-21 02:17:56,461 | INFO     | sufficient remaining disk space (2119615643648 B)
[2024-06-20 19:18:14] 2024-06-21 02:17:56,461 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 19:18:14] 2024-06-21 02:17:56,461 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 19:18:14] 2024-06-21 02:17:56,462 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-20 19:18:14] 2024-06-21 02:17:56,462 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 19:18:14] 2024-06-21 02:17:56,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 19:18:14] 2024-06-21 02:17:56,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 19:18:14] 2024-06-21 02:17:56,503 | INFO     | all data control threads have been joined
[2024-06-20 19:18:14] 2024-06-21 02:17:57,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 19:18:14] 2024-06-21 02:17:57,201 | INFO     | aborting loop
[2024-06-20 19:18:14] 2024-06-21 02:17:57,301 | INFO     | all payload control threads have been joined
[2024-06-20 19:18:14] 2024-06-21 02:17:57,467 | INFO     | [job] retrieve thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:57,509 | INFO     | [data] control thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:57,539 | INFO     | [payload] validate_post thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:57,609 | INFO     | [job] validate thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:57,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 19:18:14] 2024-06-21 02:17:57,679 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:57,742 | INFO     | [payload] failed_post thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:57,952 | INFO     | [data] copytool_in thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:58,134 | INFO     | all job control threads have been joined
[2024-06-20 19:18:14] 2024-06-21 02:17:58,203 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:58,205 | INFO     | [job] job monitor thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:58,306 | INFO     | [payload] control thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:58,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 19:18:14] 2024-06-21 02:17:58,965 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:59,139 | INFO     | [job] control thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:59,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 19:18:14] 2024-06-21 02:17:59,641 | INFO     | [data] copytool_out thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:17:59,689 | INFO     | [job] queue monitor thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:18:03,604 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:18:06,611 | INFO     | job.realtimelogging is not enabled
[2024-06-20 19:18:14] 2024-06-21 02:18:07,617 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 19:18:14] 2024-06-21 02:18:07,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826292889408)>', '<ExcThread(monitor, started 139825344673536)>']
[2024-06-20 19:18:14] 2024-06-21 02:18:08,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 19:18:14] 2024-06-21 02:18:08,524 | INFO     | [monitor] control thread has ended
[2024-06-20 19:18:14] 2024-06-21 02:18:12,961 | INFO     | all workflow threads have been joined
[2024-06-20 19:18:14] 2024-06-21 02:18:12,961 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 19:18:14] 2024-06-21 02:18:12,962 | INFO     | traces error code: 0
[2024-06-20 19:18:14] 2024-06-21 02:18:12,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 19:18:14] 2024-06-21 02:18:13,111 [wrapper] ==== pilot stdout END ====
[2024-06-20 19:18:14] 2024-06-21 02:18:13,113 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 19:18:14] 2024-06-21 02:18:13,115 [wrapper] pilotpid: 87930
[2024-06-20 19:18:14] 2024-06-21 02:18:13,117 [wrapper] Pilot exit status: 0
[2024-06-20 19:18:14] 2024-06-21 02:18:13,128 [wrapper] pandaids: 6238222129
[2024-06-20 19:18:14] 2024-06-21 02:18:13,185 [wrapper] cleanup supervisor_pilot  50639 87931
[2024-06-20 19:18:14] 2024-06-21 02:18:13,187 [wrapper] Test setup, not cleaning
[2024-06-20 19:18:14] 2024-06-21 02:18:13,189 [wrapper] ==== wrapper stdout END ====
[2024-06-20 19:18:14] 2024-06-21 02:18:13,190 [wrapper] ==== wrapper stderr END ====
[2024-06-20 19:18:14] 2024-06-21 02:18:13,201 [wrapper] apfmon messages muted
[2024-06-20 19:18:14]  *** Error codes and diagnostics ***
[2024-06-20 19:18:14]     "exeErrorCode": 0,
[2024-06-20 19:18:14]     "exeErrorDiag": "",
[2024-06-20 19:18:14]     "pilotErrorCode": 0,
[2024-06-20 19:18:14]     "pilotErrorDiag": "",
[2024-06-20 19:18:14]  *** Listing of results directory ***
[2024-06-20 19:18:14] total 875964
[2024-06-20 19:18:14] -rwx------ 1 boinc boinc     32308 Jun 19 11:40 runpilot2-wrapper.sh
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc      5654 Jun 19 11:40 queuedata.json
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc    469766 Jun 19 11:40 pilot3.tar.gz
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc       100 Jun 20 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 19:18:14] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 08:42 run_atlas
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc       105 Jun 20 08:42 job.xml
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc      6629 Jun 20 08:42 init_data.xml
[2024-06-20 19:18:14] -rw-r--r-- 2 boinc boinc 543436417 Jun 20 08:42 EVNT.38776210._000925.pool.root.1
[2024-06-20 19:18:14] -rw-r--r-- 2 boinc boinc     17537 Jun 20 08:42 start_atlas.sh
[2024-06-20 19:18:14] drwxrwx--x 2 boinc boinc      4096 Jun 20 08:42 shared
[2024-06-20 19:18:14] -rw-r--r-- 2 boinc boinc    482519 Jun 20 08:42 input.tar.gz
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc         0 Jun 20 08:42 boinc_lockfile
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc      2646 Jun 20 08:42 pandaJob.out
[2024-06-20 19:18:14] -rw------- 1 boinc boinc       424 Jun 20 08:42 setup.sh.local
[2024-06-20 19:18:14] -rw------- 1 boinc boinc   1015545 Jun 20 08:42 agis_schedconf.cvmfs.json
[2024-06-20 19:18:14] -rw------- 1 boinc boinc   1321254 Jun 20 08:42 cric_ddmendpoints.json
[2024-06-20 19:18:14] drwx------ 4 boinc boinc      4096 Jun 20 08:42 pilot3
[2024-06-20 19:18:14] -rw------- 1 boinc boinc 340314303 Jun 20 19:16 HITS.38921013._049252.pool.root.1
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc       533 Jun 20 19:17 boinc_task_state.xml
[2024-06-20 19:18:14] -rw------- 1 boinc boinc        95 Jun 20 19:17 pilot_heartbeat.json
[2024-06-20 19:18:14] -rw------- 1 boinc boinc      1083 Jun 20 19:17 memory_monitor_summary.json
[2024-06-20 19:18:14] -rw------- 1 boinc boinc         0 Jun 20 19:17 agis_ddmendpoints.agis.ALL.json
[2024-06-20 19:18:14] -rw------- 1 boinc boinc    701332 Jun 20 19:17 log.38921013._049252.job.log.tgz.1
[2024-06-20 19:18:14] -rw------- 1 boinc boinc      7793 Jun 20 19:17 heartbeat.json
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc        29 Jun 20 19:18 wrapper_checkpoint.txt
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc      8192 Jun 20 19:18 boinc_mmap_file
[2024-06-20 19:18:14] -rw------- 1 boinc boinc      4405 Jun 20 19:18 pilotlog.txt
[2024-06-20 19:18:14] -rw------- 1 boinc boinc   4155803 Jun 20 19:18 log.38921013._049252.job.log.1
[2024-06-20 19:18:14] -rw------- 1 boinc boinc       357 Jun 20 19:18 output.list
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc       620 Jun 20 19:18 runtime_log
[2024-06-20 19:18:14] -rw------- 1 boinc boinc   4874240 Jun 20 19:18 result.tar.gz
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc     11287 Jun 20 19:18 runtime_log.err
[2024-06-20 19:18:14] -rw------- 1 boinc boinc       660 Jun 20 19:18 etOKDmAPFe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmGtWKDm2OLg5m.diag
[2024-06-20 19:18:14] -rw-r--r-- 1 boinc boinc     21863 Jun 20 19:18 stderr.txt
[2024-06-20 19:18:14] HITS file was successfully produced:
[2024-06-20 19:18:14] -rw------- 1 boinc boinc 340314303 Jun 20 19:16 shared/HITS.pool.root.1
[2024-06-20 19:18:14]  *** Contents of shared directory: ***
[2024-06-20 19:18:14] total 868300
[2024-06-20 19:18:14] -rw-r--r-- 2 boinc boinc 543436417 Jun 20 08:42 ATLAS.root_0
[2024-06-20 19:18:14] -rw-r--r-- 2 boinc boinc     17537 Jun 20 08:42 start_atlas.sh
[2024-06-20 19:18:14] -rw-r--r-- 2 boinc boinc    482519 Jun 20 08:42 input.tar.gz
[2024-06-20 19:18:14] -rw------- 1 boinc boinc 340314303 Jun 20 19:16 HITS.pool.root.1
[2024-06-20 19:18:14] -rw------- 1 boinc boinc   4874240 Jun 20 19:18 result.tar.gz
19:18:15 (83742): run_atlas exited; CPU time 107894.744177
19:18:15 (83742): called boinc_finish(0)

</stderr_txt>
]]>

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