Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
19:11:55 (167830): wrapper (7.7.26015): starting
19:11:55 (167830): wrapper: running run_atlas (--nthreads 12)
[2024-06-20 19:11:55] Arguments: --nthreads 12
[2024-06-20 19:11:55] Threads: 12
[2024-06-20 19:11:55] Checking for CVMFS
[2024-06-20 19:11:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 19:11:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 19:11:55] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 19:11:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 19:11:56] 2.9.2.0 2046 13920655 70236 134109 3 229 40629750 45568000 6977 130560 0 2946706 99.746 2841789 5317 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-20 19:11:56] CVMFS is ok
[2024-06-20 19:11:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 19:11:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 19:11:56] Further information can be found at the LHC@home message board.
[2024-06-20 19:11:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 19:11:56] Checking for apptainer binary...
[2024-06-20 19:11:56] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 19:11:56] Running /usr/bin/apptainer --version
[2024-06-20 19:11:56] apptainer version 1.1.8-1.el7
[2024-06-20 19:11:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 19:11:57] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0038.triumf.lcg
[2024-06-20 19:11:57] apptainer works
[2024-06-20 19:11:57] Set ATHENA_PROC_NUMBER=12
[2024-06-20 19:11:57] Set ATHENA_CORE_NUMBER=12
[2024-06-20 19:11:57] Starting ATLAS job with PandaID=6238194420
[2024-06-20 19:11:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 23:37:40]  *** The last 200 lines of the pilot log: ***
[2024-06-20 23:37:40] 2024-06-21 06:37:17,191 | INFO     | current chi2=6.467760606024896 (change=-0.020251411206384025 %)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,191 | INFO     | right removable region: 254
[2024-06-20 23:37:40] 2024-06-21 06:37:17,191 | INFO     | model: linear, x: [1718936266.0, 1718936327.0, 1718936388.0, 1718936449.0, 1718936511.0, 1718936571.0, 1718936632.0, 1718936693.0, 1718936756.0, 1718936815.0, 1718
[2024-06-20 23:37:40] 2024-06-21 06:37:17,191 | INFO     | sum of square deviations: 5141212403.725485
[2024-06-20 23:37:40] 2024-06-21 06:37:17,192 | INFO     | sum of deviations: 121169531669.58823
[2024-06-20 23:37:40] 2024-06-21 06:37:17,192 | INFO     | mean x: 1718944014.490196
[2024-06-20 23:37:40] 2024-06-21 06:37:17,192 | INFO     | mean y: 2711806.2352941176
[2024-06-20 23:37:40] 2024-06-21 06:37:17,192 | INFO     | -- intersect: -40509841429.47425
[2024-06-20 23:37:40] 2024-06-21 06:37:17,192 | INFO     | intersect: -40509841429.47425
[2024-06-20 23:37:40] 2024-06-21 06:37:17,193 | INFO     | chi2: 3.352355414074174
[2024-06-20 23:37:40] 2024-06-21 06:37:17,193 | INFO     | current chi2=3.352355414074174 (change=48.15772386147481 %)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,193 | INFO     | model: linear, x: [1718936571.0, 1718936632.0, 1718936693.0, 1718936756.0, 1718936815.0, 1718936876.0, 1718936937.0, 1718936998.0, 1718937060.0, 1718937122.0, 1718
[2024-06-20 23:37:40] 2024-06-21 06:37:17,193 | INFO     | sum of square deviations: 4844557407.936011
[2024-06-20 23:37:40] 2024-06-21 06:37:17,194 | INFO     | sum of deviations: 54878026680.71196
[2024-06-20 23:37:40] 2024-06-21 06:37:17,194 | INFO     | mean x: 1718944167.016
[2024-06-20 23:37:40] 2024-06-21 06:37:17,194 | INFO     | mean y: 2745891.072
[2024-06-20 23:37:40] 2024-06-21 06:37:17,194 | INFO     | -- intersect: -19469056363.8935
[2024-06-20 23:37:40] 2024-06-21 06:37:17,194 | INFO     | intersect: -19469056363.8935
[2024-06-20 23:37:40] 2024-06-21 06:37:17,194 | INFO     | chi2: 1.2942100347036836
[2024-06-20 23:37:40] 2024-06-21 06:37:17,194 | INFO     | current chi2=1.2942100347036836 (change=61.39400884314923 %)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,195 | INFO     | model: linear, x: [1718936876.0, 1718936937.0, 1718936998.0, 1718937060.0, 1718937122.0, 1718937181.0, 1718937242.0, 1718937303.0, 1718937366.0, 1718937425.0, 1718
[2024-06-20 23:37:40] 2024-06-21 06:37:17,195 | INFO     | sum of square deviations: 4559545786.88162
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | sum of deviations: 8654693701.351019
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | mean x: 1718944319.5387754
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | mean y: 2770526.436734694
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | -- intersect: -3260040567.1788063
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | intersect: -3260040567.1788063
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | chi2: 0.17165889609877236
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | current chi2=0.17165889609877236 (change=86.73639583253002 %)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | model: linear, x: [1718937181.0, 1718937242.0, 1718937303.0, 1718937366.0, 1718937425.0, 1718937489.0, 1718937547.0, 1718937609.0, 1718937670.0, 1718937730.0, 1718
[2024-06-20 23:37:40] 2024-06-21 06:37:17,196 | INFO     | sum of square deviations: 4285944309.1833177
[2024-06-20 23:37:40] 2024-06-21 06:37:17,197 | INFO     | sum of deviations: -6310061486.12492
[2024-06-20 23:37:40] 2024-06-21 06:37:17,197 | INFO     | mean x: 1718944472.0583334
[2024-06-20 23:37:40] 2024-06-21 06:37:17,197 | INFO     | mean y: 2778818.4375
[2024-06-20 23:37:40] 2024-06-21 06:37:17,197 | INFO     | -- intersect: 2533526893.4141064
[2024-06-20 23:37:40] 2024-06-21 06:37:17,197 | INFO     | intersect: 2533526893.4141064
[2024-06-20 23:37:40] 2024-06-21 06:37:17,198 | INFO     | chi2: 0.02721465719048118
[2024-06-20 23:37:40] 2024-06-21 06:37:17,198 | INFO     | current chi2=0.02721465719048118 (change=84.14608400206541 %)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,198 | INFO     | model: linear, x: [1718937489.0, 1718937547.0, 1718937609.0, 1718937670.0, 1718937730.0, 1718937792.0, 1718937853.0, 1718937914.0, 1718937974.0, 1718938035.0, 1718
[2024-06-20 23:37:40] 2024-06-21 06:37:17,198 | INFO     | sum of square deviations: 4023491555.131928
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | sum of deviations: -9318583181.689362
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | mean x: 1718944624.5829787
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | mean y: 2780563.7276595742
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | -- intersect: 3983931822.38093
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | intersect: 3983931822.38093
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | chi2: 0.02103770779126064
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | current chi2=0.02103770779126064 (change=22.697142043666968 %)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | left removable region: 50
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | model: linear, x: [1718939011.0, 1718939075.0, 1718939136.0, 1718939195.0, 1718939256.0, 1718939317.0, 1718939384.0, 1718939438.0, 1718939500.0, 1718939570.0, 1718
[2024-06-20 23:37:40] 2024-06-21 06:37:17,199 | INFO     | sum of square deviations: 2631921339.176478
[2024-06-20 23:37:40] 2024-06-21 06:37:17,200 | INFO     | sum of deviations: -2969786418.0
[2024-06-20 23:37:40] 2024-06-21 06:37:17,200 | INFO     | mean x: 1718945204.1176472
[2024-06-20 23:37:40] 2024-06-21 06:37:17,200 | INFO     | mean y: 2775684.0
[2024-06-20 23:37:40] 2024-06-21 06:37:17,200 | INFO     | -- intersect: 1942385369.3229427
[2024-06-20 23:37:40] 2024-06-21 06:37:17,200 | INFO     | intersect: 1942385369.3229427
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | chi2: 0.015283263611646707
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | -- intersect: 1942385369.3229427
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | current memory leak: -1.13 B/s (using 204 data points, chi2=0.02)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | ..............................
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | . Timing measurements:
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | . get job = 0 s
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | . initial setup = 2 s
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | . payload setup = 5 s
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | . stage-in = 0 s
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | . payload execution = 15863 s
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | . stage-out = 1 s
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | . log creation = 0 s
[2024-06-20 23:37:40] 2024-06-21 06:37:17,201 | INFO     | ..............................
[2024-06-20 23:37:40] 2024-06-21 06:37:17,255 | INFO     | 
[2024-06-20 23:37:40] 2024-06-21 06:37:17,256 | INFO     | job summary report
[2024-06-20 23:37:40] 2024-06-21 06:37:17,256 | INFO     | --------------------------------------------------
[2024-06-20 23:37:40] 2024-06-21 06:37:17,256 | INFO     | PanDA job id: 6238194420
[2024-06-20 23:37:40] 2024-06-21 06:37:17,256 | INFO     | task id: 38920987
[2024-06-20 23:37:40] 2024-06-21 06:37:17,256 | INFO     | errors: (none)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,256 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 23:37:40] 2024-06-21 06:37:17,256 | INFO     | pilot state: finished 
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | transexitcode: 0
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | exeerrorcode: 0
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | exeerrordiag: 
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | exitcode: 0
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | exitmsg: OK
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | cpuconsumptiontime: 68913 s
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | nevents: 400
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | neventsw: 0
[2024-06-20 23:37:40] 2024-06-21 06:37:17,257 | INFO     | pid: 178385
[2024-06-20 23:37:40] 2024-06-21 06:37:17,258 | INFO     | pgrp: 178385
[2024-06-20 23:37:40] 2024-06-21 06:37:17,258 | INFO     | corecount: 12
[2024-06-20 23:37:40] 2024-06-21 06:37:17,258 | INFO     | event service: False
[2024-06-20 23:37:40] 2024-06-21 06:37:17,258 | INFO     | sizes: {0: 2386796, 1: 2386995, 6: 2387201, 11: 2387229, 15873: 2417778, 15876: 2426732, 15879: 2426916, 15890: 2427086}
[2024-06-20 23:37:40] 2024-06-21 06:37:17,258 | INFO     | --------------------------------------------------
[2024-06-20 23:37:40] 2024-06-21 06:37:17,258 | INFO     | 
[2024-06-20 23:37:40] 2024-06-21 06:37:17,258 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-20 23:37:40] 2024-06-21 06:37:17,291 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,291 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,291 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,293 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,293 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 23:37:40] 2024-06-21 06:37:17,293 | INFO     | job 6238194420 has completed (purged errors)
[2024-06-20 23:37:40] 2024-06-21 06:37:17,294 | INFO     | overall cleanup function is called
[2024-06-20 23:37:40] 2024-06-21 06:37:18,302 | INFO     | --- collectZombieJob: --- 10, [178385]
[2024-06-20 23:37:40] 2024-06-21 06:37:18,302 | INFO     | zombie collector waiting for pid 178385
[2024-06-20 23:37:40] 2024-06-21 06:37:18,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 23:37:40] 2024-06-21 06:37:19,308 | INFO     | collected zombie processes
[2024-06-20 23:37:40] 2024-06-21 06:37:19,308 | INFO     | will now attempt to kill all subprocesses of pid=178385
[2024-06-20 23:37:40] 2024-06-21 06:37:19,429 | INFO     | process IDs to be killed: [178385] (in reverse order)
[2024-06-20 23:37:40] 2024-06-21 06:37:19,499 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 23:37:40] 2024-06-21 06:37:19,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 23:37:40] 2024-06-21 06:37:19,503 | INFO     | did not find any defunct processes belonging to 178385
[2024-06-20 23:37:40] 2024-06-21 06:37:19,506 | INFO     | did not find any defunct processes belonging to 178385
[2024-06-20 23:37:40] 2024-06-21 06:37:19,506 | INFO     | ready for new job
[2024-06-20 23:37:40] 2024-06-21 06:37:19,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 23:37:40] 2024-06-21 06:37:19,508 | INFO     | *************************************
[2024-06-20 23:37:40] 2024-06-21 06:37:19,508 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 23:37:40] 2024-06-21 06:37:19,508 | INFO     | *************************************
[2024-06-20 23:37:40] 2024-06-21 06:37:19,508 | INFO     | 
[2024-06-20 23:37:40] 2024-06-21 06:37:19,511 | INFO     | architecture information:
[2024-06-20 23:37:40] 2024-06-21 06:37:19,511 | INFO     | executing command: cat /etc/os-release
[2024-06-20 23:37:40] 2024-06-21 06:37:19,532 | INFO     | cat /etc/os-release:
[2024-06-20 23:37:40] NAME="CentOS Linux"
[2024-06-20 23:37:40] VERSION="7 (Core)"
[2024-06-20 23:37:40] ID="centos"
[2024-06-20 23:37:40] ID_LIKE="rhel fedora"
[2024-06-20 23:37:40] VERSION_ID="7"
[2024-06-20 23:37:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 23:37:40] ANSI_COLOR="0;31"
[2024-06-20 23:37:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 23:37:40] HOME_URL="https://www.centos.org/"
[2024-06-20 23:37:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 23:37:40] 
[2024-06-20 23:37:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 23:37:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 23:37:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 23:37:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 23:37:40] 
[2024-06-20 23:37:40] 2024-06-21 06:37:19,532 | INFO     | *************************************
[2024-06-20 23:37:40] 2024-06-21 06:37:20,035 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-20 23:37:40] 2024-06-21 06:37:20,063 | INFO     | sufficient remaining disk space (2160416784384 B)
[2024-06-20 23:37:40] 2024-06-21 06:37:20,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 23:37:40] 2024-06-21 06:37:20,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 23:37:40] 2024-06-21 06:37:20,064 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-20 23:37:40] 2024-06-21 06:37:20,064 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 23:37:40] 2024-06-21 06:37:20,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 23:37:40] 2024-06-21 06:37:20,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 23:37:40] 2024-06-21 06:37:20,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 23:37:40] 2024-06-21 06:37:20,112 | INFO     | aborting loop
[2024-06-20 23:37:40] 2024-06-21 06:37:20,660 | INFO     | all data control threads have been joined
[2024-06-20 23:37:40] 2024-06-21 06:37:20,873 | INFO     | all payload control threads have been joined
[2024-06-20 23:37:40] 2024-06-21 06:37:21,065 | INFO     | [job] retrieve thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:21,114 | INFO     | [job] job monitor thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:21,177 | INFO     | all job control threads have been joined
[2024-06-20 23:37:40] 2024-06-21 06:37:21,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 23:37:40] 2024-06-21 06:37:21,484 | INFO     | [data] copytool_in thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:21,485 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:21,489 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:21,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 23:37:40] 2024-06-21 06:37:21,666 | INFO     | [data] control thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:21,878 | INFO     | [payload] control thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:21,935 | INFO     | [payload] validate_post thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:22,070 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:22,100 | INFO     | [payload] failed_post thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:22,107 | INFO     | [job] validate thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:22,179 | INFO     | [job] control thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:22,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 23:37:40] 2024-06-21 06:37:23,237 | INFO     | [data] copytool_out thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:23,265 | INFO     | [job] queue monitor thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:25,627 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:30,970 | INFO     | job.realtimelogging is not enabled
[2024-06-20 23:37:40] 2024-06-21 06:37:31,976 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 23:37:40] 2024-06-21 06:37:33,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013410461504)>', '<ExcThread(monitor, started 140012846839552)>']
[2024-06-20 23:37:40] 2024-06-21 06:37:34,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 23:37:40] 2024-06-21 06:37:34,127 | INFO     | [monitor] control thread has ended
[2024-06-20 23:37:40] 2024-06-21 06:37:38,335 | INFO     | all workflow threads have been joined
[2024-06-20 23:37:40] 2024-06-21 06:37:38,335 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 23:37:40] 2024-06-21 06:37:38,336 | INFO     | traces error code: 0
[2024-06-20 23:37:40] 2024-06-21 06:37:38,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 23:37:40] 2024-06-21 06:37:38,459 [wrapper] ==== pilot stdout END ====
[2024-06-20 23:37:40] 2024-06-21 06:37:38,465 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 23:37:40] 2024-06-21 06:37:38,471 [wrapper] pilotpid: 171976
[2024-06-20 23:37:40] 2024-06-21 06:37:38,477 [wrapper] Pilot exit status: 0
[2024-06-20 23:37:40] 2024-06-21 06:37:38,495 [wrapper] pandaids: 6238194420
[2024-06-20 23:37:40] 2024-06-21 06:37:38,541 [wrapper] cleanup supervisor_pilot 196251 171977
[2024-06-20 23:37:40] 2024-06-21 06:37:38,547 [wrapper] Test setup, not cleaning
[2024-06-20 23:37:40] 2024-06-21 06:37:38,553 [wrapper] ==== wrapper stdout END ====
[2024-06-20 23:37:40] 2024-06-21 06:37:38,559 [wrapper] ==== wrapper stderr END ====
[2024-06-20 23:37:40] 2024-06-21 06:37:38,571 [wrapper] apfmon messages muted
[2024-06-20 23:37:40]  *** Error codes and diagnostics ***
[2024-06-20 23:37:40]     "exeErrorCode": 0,
[2024-06-20 23:37:40]     "exeErrorDiag": "",
[2024-06-20 23:37:40]     "pilotErrorCode": 0,
[2024-06-20 23:37:40]     "pilotErrorDiag": "",
[2024-06-20 23:37:40]  *** Listing of results directory ***
[2024-06-20 23:37:40] total 959976
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc    469766 Jun 19 10:36 pilot3.tar.gz
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc      5654 Jun 19 11:05 queuedata.json
[2024-06-20 23:37:40] -rwx------ 1 boinc boinc     32308 Jun 19 11:06 runpilot2-wrapper.sh
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc       100 Jun 20 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 23:37:40] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 19:11 run_atlas
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc       105 Jun 20 19:11 job.xml
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc      6627 Jun 20 19:11 init_data.xml
[2024-06-20 23:37:40] -rw-r--r-- 2 boinc boinc 637473039 Jun 20 19:11 EVNT.38776170._000716.pool.root.1
[2024-06-20 23:37:40] drwxrwx--x 2 boinc boinc      4096 Jun 20 19:11 shared
[2024-06-20 23:37:40] -rw-r--r-- 2 boinc boinc    482538 Jun 20 19:11 input.tar.gz
[2024-06-20 23:37:40] -rw-r--r-- 2 boinc boinc     17537 Jun 20 19:11 start_atlas.sh
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc         0 Jun 20 19:11 boinc_lockfile
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc      2615 Jun 20 19:11 pandaJob.out
[2024-06-20 23:37:40] -rw------- 1 boinc boinc       424 Jun 20 19:11 setup.sh.local
[2024-06-20 23:37:40] -rw------- 1 boinc boinc   1024126 Jun 20 19:12 agis_schedconf.cvmfs.json
[2024-06-20 23:37:40] -rw------- 1 boinc boinc   1321251 Jun 20 19:12 cric_ddmendpoints.json
[2024-06-20 23:37:40] drwx------ 4 boinc boinc      4096 Jun 20 19:12 pilot3
[2024-06-20 23:37:40] -rw------- 1 boinc boinc 338336624 Jun 20 23:36 HITS.38920987._059218.pool.root.1
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc       532 Jun 20 23:36 boinc_task_state.xml
[2024-06-20 23:37:40] -rw------- 1 boinc boinc        95 Jun 20 23:36 pilot_heartbeat.json
[2024-06-20 23:37:40] -rw------- 1 boinc boinc      1058 Jun 20 23:36 memory_monitor_summary.json
[2024-06-20 23:37:40] -rw------- 1 boinc boinc         0 Jun 20 23:37 agis_ddmendpoints.agis.ALL.json
[2024-06-20 23:37:40] -rw------- 1 boinc boinc    454656 Jun 20 23:37 log.38920987._059218.job.log.tgz.1
[2024-06-20 23:37:40] -rw------- 1 boinc boinc      7769 Jun 20 23:37 heartbeat.json
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc      8192 Jun 20 23:37 boinc_mmap_file
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc        28 Jun 20 23:37 wrapper_checkpoint.txt
[2024-06-20 23:37:40] -rw------- 1 boinc boinc      4405 Jun 20 23:37 pilotlog.txt
[2024-06-20 23:37:40] -rw------- 1 boinc boinc   1379948 Jun 20 23:37 log.38920987._059218.job.log.1
[2024-06-20 23:37:40] -rw------- 1 boinc boinc       357 Jun 20 23:37 output.list
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc       620 Jun 20 23:37 runtime_log
[2024-06-20 23:37:40] -rw------- 1 boinc boinc   1853440 Jun 20 23:37 result.tar.gz
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc     11287 Jun 20 23:37 runtime_log.err
[2024-06-20 23:37:40] -rw------- 1 boinc boinc       661 Jun 20 23:37 H2yNDm0sEe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmZNkKDmYucxHm.diag
[2024-06-20 23:37:40] -rw-r--r-- 1 boinc boinc     21954 Jun 20 23:37 stderr.txt
[2024-06-20 23:37:40] HITS file was successfully produced:
[2024-06-20 23:37:40] -rw------- 1 boinc boinc 338336624 Jun 20 23:36 shared/HITS.pool.root.1
[2024-06-20 23:37:40]  *** Contents of shared directory: ***
[2024-06-20 23:37:40] total 955256
[2024-06-20 23:37:40] -rw-r--r-- 2 boinc boinc 637473039 Jun 20 19:11 ATLAS.root_0
[2024-06-20 23:37:40] -rw-r--r-- 2 boinc boinc    482538 Jun 20 19:11 input.tar.gz
[2024-06-20 23:37:40] -rw-r--r-- 2 boinc boinc     17537 Jun 20 19:11 start_atlas.sh
[2024-06-20 23:37:40] -rw------- 1 boinc boinc 338336624 Jun 20 23:36 HITS.pool.root.1
[2024-06-20 23:37:40] -rw------- 1 boinc boinc   1853440 Jun 20 23:37 result.tar.gz
23:37:42 (167830): run_atlas exited; CPU time 68520.891384
23:37:42 (167830): called boinc_finish(0)

</stderr_txt>
]]>

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