Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:54:11 (2430): wrapper (7.7.26015): starting
02:54:11 (2430): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 02:54:11] Arguments: --nthreads 4
[2024-06-20 02:54:11] Threads: 4
[2024-06-20 02:54:11] Checking for CVMFS
[2024-06-20 02:54:18] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 02:54:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 02:54:18] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 02:54:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 02:54:19] 2.11.2.0 2570 0 32232 134072 4 1 2482927 4096001 0 130560 0 0 0.000 1141 1834 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-06-20 02:54:19] CVMFS is ok
[2024-06-20 02:54:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 02:54:19] Checking for apptainer binary...
[2024-06-20 02:54:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 02:54:19] Running /usr/bin/apptainer --version
[2024-06-20 02:54:19] apptainer version 1.3.0
[2024-06-20 02:54:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 02:54:20] TS-P310
[2024-06-20 02:54:20] apptainer works
[2024-06-20 02:54:20] Set ATHENA_PROC_NUMBER=4
[2024-06-20 02:54:20] Set ATHENA_CORE_NUMBER=4
[2024-06-20 02:54:20] Starting ATLAS job with PandaID=6238191613
[2024-06-20 02:54:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 09:22:42]  *** The last 200 lines of the pilot log: ***
[2024-06-20 09:22:42] 2024-06-20 07:22:20,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 09:22:42] 2024-06-20 07:22:20,468 | INFO     | fitting pss+swap vs Time
[2024-06-20 09:22:42] 2024-06-20 07:22:20,468 | INFO     | model: linear, x: [1718844987.0, 1718845048.0, 1718845109.0, 1718845170.0, 1718845231.0, 1718845292.0, 1718845353.0, 1718845414.0, 1718845475.0, 1718845536.0, 1718
[2024-06-20 09:22:42] 2024-06-20 07:22:20,468 | INFO     | sum of square deviations: 17014774835.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,471 | INFO     | sum of deviations: 110876364733.5
[2024-06-20 09:22:42] 2024-06-20 07:22:20,471 | INFO     | mean x: 1718856546.5
[2024-06-20 09:22:42] 2024-06-20 07:22:20,471 | INFO     | mean y: 2388593.1289473684
[2024-06-20 09:22:42] 2024-06-20 07:22:20,471 | INFO     | -- intersect: -11198498119.886328
[2024-06-20 09:22:42] 2024-06-20 07:22:20,471 | INFO     | intersect: -11198498119.886328
[2024-06-20 09:22:42] 2024-06-20 07:22:20,472 | INFO     | chi2: 4.20134449925434
[2024-06-20 09:22:42] 2024-06-20 07:22:20,472 | INFO     | model: linear, x: [1718844987.0, 1718845048.0, 1718845109.0, 1718845170.0, 1718845231.0, 1718845292.0, 1718845353.0, 1718845414.0, 1718845475.0, 1718845536.0, 1718
[2024-06-20 09:22:42] 2024-06-20 07:22:20,472 | INFO     | sum of square deviations: 16351934500.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,475 | INFO     | sum of deviations: 131811894774.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,475 | INFO     | mean x: 1718856394.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,475 | INFO     | mean y: 2393354.2106666667
[2024-06-20 09:22:42] 2024-06-20 07:22:20,475 | INFO     | -- intersect: -13853197746.496412
[2024-06-20 09:22:42] 2024-06-20 07:22:20,475 | INFO     | intersect: -13853197746.496412
[2024-06-20 09:22:42] 2024-06-20 07:22:20,476 | INFO     | chi2: 3.5536733075205214
[2024-06-20 09:22:42] 2024-06-20 07:22:20,476 | INFO     | current chi2=3.5536733075205214 (change=15.415807769364498 %)
[2024-06-20 09:22:42] 2024-06-20 07:22:20,476 | INFO     | right removable region: 374
[2024-06-20 09:22:42] 2024-06-20 07:22:20,476 | INFO     | model: linear, x: [1718845292.0, 1718845353.0, 1718845414.0, 1718845475.0, 1718845536.0, 1718845597.0, 1718845658.0, 1718845719.0, 1718845780.0, 1718845841.0, 1718
[2024-06-20 09:22:42] 2024-06-20 07:22:20,476 | INFO     | sum of square deviations: 16351934500.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,479 | INFO     | sum of deviations: 9047184683.000008
[2024-06-20 09:22:42] 2024-06-20 07:22:20,479 | INFO     | mean x: 1718856699.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,479 | INFO     | mean y: 2411976.9653333332
[2024-06-20 09:22:42] 2024-06-20 07:22:20,479 | INFO     | -- intersect: -948595623.9680458
[2024-06-20 09:22:42] 2024-06-20 07:22:20,479 | INFO     | intersect: -948595623.9680458
[2024-06-20 09:22:42] 2024-06-20 07:22:20,480 | INFO     | chi2: 1.2112457187301762
[2024-06-20 09:22:42] 2024-06-20 07:22:20,480 | INFO     | current chi2=1.2112457187301762 (change=71.17004523325451 %)
[2024-06-20 09:22:42] 2024-06-20 07:22:20,480 | INFO     | model: linear, x: [1718845597.0, 1718845658.0, 1718845719.0, 1718845780.0, 1718845841.0, 1718845902.0, 1718845963.0, 1718846024.0, 1718846085.0, 1718846146.0, 1718
[2024-06-20 09:22:42] 2024-06-20 07:22:20,480 | INFO     | sum of square deviations: 15706536352.5
[2024-06-20 09:22:42] 2024-06-20 07:22:20,483 | INFO     | sum of deviations: -23234131034.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,483 | INFO     | mean x: 1718856851.5
[2024-06-20 09:22:42] 2024-06-20 07:22:20,483 | INFO     | mean y: 2419556.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,483 | INFO     | -- intersect: 2545064504.5842924
[2024-06-20 09:22:42] 2024-06-20 07:22:20,483 | INFO     | intersect: 2545064504.5842924
[2024-06-20 09:22:42] 2024-06-20 07:22:20,483 | INFO     | chi2: 0.7076433829091382
[2024-06-20 09:22:42] 2024-06-20 07:22:20,483 | INFO     | current chi2=0.7076433829091382 (change=41.57722318713295 %)
[2024-06-20 09:22:42] 2024-06-20 07:22:20,484 | INFO     | model: linear, x: [1718845902.0, 1718845963.0, 1718846024.0, 1718846085.0, 1718846146.0, 1718846207.0, 1718846268.0, 1718846329.0, 1718846390.0, 1718846451.0, 1718
[2024-06-20 09:22:42] 2024-06-20 07:22:20,484 | INFO     | sum of square deviations: 15078347830.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,486 | INFO     | sum of deviations: -17163232243.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,487 | INFO     | mean x: 1718857004.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,487 | INFO     | mean y: 2418080.671232877
[2024-06-20 09:22:42] 2024-06-20 07:22:20,487 | INFO     | -- intersect: 1958941586.0823147
[2024-06-20 09:22:42] 2024-06-20 07:22:20,487 | INFO     | intersect: 1958941586.0823147
[2024-06-20 09:22:42] 2024-06-20 07:22:20,487 | INFO     | chi2: 0.6988043582002184
[2024-06-20 09:22:42] 2024-06-20 07:22:20,487 | INFO     | current chi2=0.6988043582002184 (change=1.2490789742966868 %)
[2024-06-20 09:22:42] 2024-06-20 07:22:20,487 | INFO     | left removable region: 30
[2024-06-20 09:22:42] 2024-06-20 07:22:20,487 | INFO     | model: linear, x: [1718846817.0, 1718846878.0, 1718846939.0, 1718847000.0, 1718847061.0, 1718847122.0, 1718847183.0, 1718847244.0, 1718847305.0, 1718847366.0, 1718
[2024-06-20 09:22:42] 2024-06-20 07:22:20,488 | INFO     | sum of square deviations: 12622636670.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,490 | INFO     | sum of deviations: 9724199039.0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,490 | INFO     | mean x: 1718857278.5
[2024-06-20 09:22:42] 2024-06-20 07:22:20,490 | INFO     | mean y: 2422127.5872093025
[2024-06-20 09:22:42] 2024-06-20 07:22:20,490 | INFO     | -- intersect: -1321747357.1839828
[2024-06-20 09:22:42] 2024-06-20 07:22:20,490 | INFO     | intersect: -1321747357.1839828
[2024-06-20 09:22:42] 2024-06-20 07:22:20,491 | INFO     | chi2: 0.005139034539205471
[2024-06-20 09:22:42] 2024-06-20 07:22:20,491 | INFO     | -- intersect: -1321747357.1839828
[2024-06-20 09:22:42] 2024-06-20 07:22:20,491 | INFO     | current memory leak: 0.77 B/s (using 344 data points, chi2=0.01)
[2024-06-20 09:22:42] 2024-06-20 07:22:20,491 | INFO     | ..............................
[2024-06-20 09:22:42] 2024-06-20 07:22:20,491 | INFO     | . Timing measurements:
[2024-06-20 09:22:42] 2024-06-20 07:22:20,491 | INFO     | . get job = 0 s
[2024-06-20 09:22:42] 2024-06-20 07:22:20,491 | INFO     | . initial setup = 2 s
[2024-06-20 09:22:42] 2024-06-20 07:22:20,491 | INFO     | . payload setup = 21 s
[2024-06-20 09:22:42] 2024-06-20 07:22:20,492 | INFO     | . stage-in = 0 s
[2024-06-20 09:22:42] 2024-06-20 07:22:20,492 | INFO     | . payload execution = 23138 s
[2024-06-20 09:22:42] 2024-06-20 07:22:20,492 | INFO     | . stage-out = 1 s
[2024-06-20 09:22:42] 2024-06-20 07:22:20,492 | INFO     | . log creation = 0 s
[2024-06-20 09:22:42] 2024-06-20 07:22:20,492 | INFO     | ..............................
[2024-06-20 09:22:42] 2024-06-20 07:22:20,560 | INFO     | 
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | job summary report
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | --------------------------------------------------
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | PanDA job id: 6238191613
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | task id: 38920995
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | errors: (none)
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | pilot state: finished 
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | transexitcode: 0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | exeerrorcode: 0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | exeerrordiag: 
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | exitcode: 0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | exitmsg: OK
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | cpuconsumptiontime: 89658 s
[2024-06-20 09:22:42] 2024-06-20 07:22:20,561 | INFO     | nevents: 400
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | neventsw: 0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | pid: 24161
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | pgrp: 24161
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | corecount: 4
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | event service: False
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | sizes: {0: 2384244, 1: 2385179, 5: 2385385, 12: 2385441, 23163: 2420124, 23164: 2429086, 23167: 2429270, 23178: 2429440}
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | --------------------------------------------------
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | 
[2024-06-20 09:22:42] 2024-06-20 07:22:20,562 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2024-06-20 09:22:42] 2024-06-20 07:22:20,575 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,577 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 09:22:42] 2024-06-20 07:22:20,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,577 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 09:22:42] 2024-06-20 07:22:20,577 | INFO     | job 6238191613 has completed (purged errors)
[2024-06-20 09:22:42] 2024-06-20 07:22:20,577 | INFO     | overall cleanup function is called
[2024-06-20 09:22:42] 2024-06-20 07:22:21,582 | INFO     | --- collectZombieJob: --- 10, [24161]
[2024-06-20 09:22:42] 2024-06-20 07:22:21,582 | INFO     | zombie collector waiting for pid 24161
[2024-06-20 09:22:42] 2024-06-20 07:22:21,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 09:22:42] 2024-06-20 07:22:22,585 | INFO     | collected zombie processes
[2024-06-20 09:22:42] 2024-06-20 07:22:22,585 | INFO     | will now attempt to kill all subprocesses of pid=24161
[2024-06-20 09:22:42] 2024-06-20 07:22:22,630 | INFO     | process IDs to be killed: [24161] (in reverse order)
[2024-06-20 09:22:42] 2024-06-20 07:22:22,658 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 09:22:42] 2024-06-20 07:22:22,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 09:22:42] 2024-06-20 07:22:22,661 | INFO     | did not find any defunct processes belonging to 24161
[2024-06-20 09:22:42] 2024-06-20 07:22:22,663 | INFO     | did not find any defunct processes belonging to 24161
[2024-06-20 09:22:42] 2024-06-20 07:22:22,663 | INFO     | ready for new job
[2024-06-20 09:22:42] 2024-06-20 07:22:22,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 09:22:42] 2024-06-20 07:22:22,664 | INFO     | *************************************
[2024-06-20 09:22:42] 2024-06-20 07:22:22,665 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 09:22:42] 2024-06-20 07:22:22,665 | INFO     | *************************************
[2024-06-20 09:22:42] 2024-06-20 07:22:22,665 | INFO     | 
[2024-06-20 09:22:42] 2024-06-20 07:22:22,665 | INFO     | architecture information:
[2024-06-20 09:22:42] 2024-06-20 07:22:22,665 | INFO     | executing command: cat /etc/os-release
[2024-06-20 09:22:42] 2024-06-20 07:22:22,675 | INFO     | cat /etc/os-release:
[2024-06-20 09:22:42] NAME="CentOS Linux"
[2024-06-20 09:22:42] VERSION="7 (Core)"
[2024-06-20 09:22:42] ID="centos"
[2024-06-20 09:22:42] ID_LIKE="rhel fedora"
[2024-06-20 09:22:42] VERSION_ID="7"
[2024-06-20 09:22:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 09:22:42] ANSI_COLOR="0;31"
[2024-06-20 09:22:42] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 09:22:42] HOME_URL="https://www.centos.org/"
[2024-06-20 09:22:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 09:22:42] 
[2024-06-20 09:22:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 09:22:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 09:22:42] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 09:22:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 09:22:42] 
[2024-06-20 09:22:42] 2024-06-20 07:22:22,675 | INFO     | *************************************
[2024-06-20 09:22:42] 2024-06-20 07:22:23,178 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2024-06-20 09:22:42] 2024-06-20 07:22:23,188 | INFO     | sufficient remaining disk space (61339598848 B)
[2024-06-20 09:22:42] 2024-06-20 07:22:23,189 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 09:22:42] 2024-06-20 07:22:23,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 09:22:42] 2024-06-20 07:22:23,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 09:22:42] 2024-06-20 07:22:23,189 | INFO     | aborting loop
[2024-06-20 09:22:42] 2024-06-20 07:22:23,189 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-20 09:22:42] 2024-06-20 07:22:23,189 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 09:22:42] 2024-06-20 07:22:23,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 09:22:42] 2024-06-20 07:22:23,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 09:22:42] 2024-06-20 07:22:23,211 | INFO     | all payload control threads have been joined
[2024-06-20 09:22:42] 2024-06-20 07:22:23,939 | INFO     | all data control threads have been joined
[2024-06-20 09:22:42] 2024-06-20 07:22:24,192 | INFO     | [job] job monitor thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:24,194 | INFO     | [job] retrieve thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:24,217 | INFO     | [payload] control thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:24,527 | INFO     | [payload] failed_post thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:24,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 09:22:42] 2024-06-20 07:22:24,720 | INFO     | all job control threads have been joined
[2024-06-20 09:22:42] 2024-06-20 07:22:24,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 09:22:42] 2024-06-20 07:22:24,759 | INFO     | [job] validate thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:24,855 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:24,879 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:24,895 | INFO     | [data] copytool_in thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:24,945 | INFO     | [data] control thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:25,375 | INFO     | [payload] validate_post thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:25,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 09:22:42] 2024-06-20 07:22:25,592 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:25,725 | INFO     | [job] control thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:26,572 | INFO     | [data] copytool_out thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:26,576 | INFO     | [job] queue monitor thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:28,728 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:33,877 | INFO     | job.realtimelogging is not enabled
[2024-06-20 09:22:42] 2024-06-20 07:22:34,882 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 09:22:42] 2024-06-20 07:22:36,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866320914240)>', '<ExcThread(monitor, started 139865609991936)>']
[2024-06-20 09:22:42] 2024-06-20 07:22:37,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 09:22:42] 2024-06-20 07:22:37,243 | INFO     | [monitor] control thread has ended
[2024-06-20 09:22:42] 2024-06-20 07:22:41,608 | INFO     | all workflow threads have been joined
[2024-06-20 09:22:42] 2024-06-20 07:22:41,608 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 09:22:42] 2024-06-20 07:22:41,609 | INFO     | traces error code: 0
[2024-06-20 09:22:42] 2024-06-20 07:22:41,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 09:22:42] 2024-06-20 07:22:41,997 [wrapper] ==== pilot stdout END ====
[2024-06-20 09:22:42] 2024-06-20 07:22:41,998 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 09:22:42] 2024-06-20 07:22:42,000 [wrapper] pilotpid: 7527
[2024-06-20 09:22:42] 2024-06-20 07:22:42,002 [wrapper] Pilot exit status: 0
[2024-06-20 09:22:42] 2024-06-20 07:22:42,090 [wrapper] pandaids: 6238191613
[2024-06-20 09:22:42] 2024-06-20 07:22:42,103 [wrapper] cleanup supervisor_pilot   99036 7528
[2024-06-20 09:22:42] 2024-06-20 07:22:42,105 [wrapper] Test setup, not cleaning
[2024-06-20 09:22:42] 2024-06-20 07:22:42,106 [wrapper] ==== wrapper stdout END ====
[2024-06-20 09:22:42] 2024-06-20 07:22:42,108 [wrapper] ==== wrapper stderr END ====
[2024-06-20 09:22:42] 2024-06-20 07:22:42,111 [wrapper] apfmon messages muted
[2024-06-20 09:22:42]  *** Error codes and diagnostics ***
[2024-06-20 09:22:42]     "exeErrorCode": 0,
[2024-06-20 09:22:42]     "exeErrorDiag": "",
[2024-06-20 09:22:42]     "pilotErrorCode": 0,
[2024-06-20 09:22:42]     "pilotErrorDiag": "",
[2024-06-20 09:22:42]  *** Listing of results directory ***
[2024-06-20 09:22:42] insgesamt 968932
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc    469766 19. Jun 19:36 pilot3.tar.gz
[2024-06-20 09:22:42] -rwx------ 1 boinc boinc     32308 19. Jun 20:05 runpilot2-wrapper.sh
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc      5654 19. Jun 20:05 queuedata.json
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc       100 20. Jun 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 09:22:42] -rwxr-xr-x 1 boinc boinc      7986 20. Jun 02:54 run_atlas
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc       105 20. Jun 02:54 job.xml
[2024-06-20 09:22:42] -rw-r--r-- 2 boinc boinc     17537 20. Jun 02:54 start_atlas.sh
[2024-06-20 09:22:42] drwxrwx--x 2 boinc boinc      4096 20. Jun 02:54 shared
[2024-06-20 09:22:42] -rw-r--r-- 2 boinc boinc    482527 20. Jun 02:54 input.tar.gz
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc      6707 20. Jun 02:54 init_data.xml
[2024-06-20 09:22:42] -rw-r--r-- 2 boinc boinc 634153214 20. Jun 02:54 EVNT.38776180._000771.pool.root.1
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc         0 20. Jun 02:54 boinc_lockfile
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc      2613 20. Jun 02:54 pandaJob.out
[2024-06-20 09:22:42] -rw------- 1 boinc boinc       461 20. Jun 02:54 setup.sh.local
[2024-06-20 09:22:42] -rw------- 1 boinc boinc   1021700 20. Jun 02:55 agis_schedconf.cvmfs.json
[2024-06-20 09:22:42] -rw------- 1 boinc boinc   1320365 20. Jun 02:55 cric_ddmendpoints.json
[2024-06-20 09:22:42] drwx------ 4 boinc boinc      4096 20. Jun 02:55 pilot3
[2024-06-20 09:22:42] -rw------- 1 boinc boinc 348929263 20. Jun 09:21 HITS.38920995._056648.pool.root.1
[2024-06-20 09:22:42] -rw------- 1 boinc boinc        95 20. Jun 09:21 pilot_heartbeat.json
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc       531 20. Jun 09:21 boinc_task_state.xml
[2024-06-20 09:22:42] -rw------- 1 boinc boinc      1036 20. Jun 09:22 memory_monitor_summary.json
[2024-06-20 09:22:42] -rw------- 1 boinc boinc         0 20. Jun 09:22 agis_ddmendpoints.agis.ALL.json
[2024-06-20 09:22:42] -rw------- 1 boinc boinc    413506 20. Jun 09:22 log.38920995._056648.job.log.tgz.1
[2024-06-20 09:22:42] -rw------- 1 boinc boinc      7701 20. Jun 09:22 heartbeat.json
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc      8192 20. Jun 09:22 boinc_mmap_file
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc        28 20. Jun 09:22 wrapper_checkpoint.txt
[2024-06-20 09:22:42] -rw------- 1 boinc boinc      4407 20. Jun 09:22 pilotlog.txt
[2024-06-20 09:22:42] -rw------- 1 boinc boinc   2373380 20. Jun 09:22 log.38920995._056648.job.log.1
[2024-06-20 09:22:42] -rw------- 1 boinc boinc       357 20. Jun 09:22 output.list
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc       620 20. Jun 09:22 runtime_log
[2024-06-20 09:22:42] -rw------- 1 boinc boinc   2805760 20. Jun 09:22 result.tar.gz
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc     11355 20. Jun 09:22 runtime_log.err
[2024-06-20 09:22:42] -rw------- 1 boinc boinc       642 20. Jun 09:22 nKbNDm0rEe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmINkKDmBQoYbn.diag
[2024-06-20 09:22:42] -rw-r--r-- 1 boinc boinc     21177 20. Jun 09:22 stderr.txt
[2024-06-20 09:22:42] HITS file was successfully produced:
[2024-06-20 09:22:42] -rw------- 1 boinc boinc 348929263 20. Jun 09:21 shared/HITS.pool.root.1
[2024-06-20 09:22:42]  *** Contents of shared directory: ***
[2024-06-20 09:22:42] insgesamt 963284
[2024-06-20 09:22:42] -rw-r--r-- 2 boinc boinc     17537 20. Jun 02:54 start_atlas.sh
[2024-06-20 09:22:42] -rw-r--r-- 2 boinc boinc    482527 20. Jun 02:54 input.tar.gz
[2024-06-20 09:22:42] -rw-r--r-- 2 boinc boinc 634153214 20. Jun 02:54 ATLAS.root_0
[2024-06-20 09:22:42] -rw------- 1 boinc boinc 348929263 20. Jun 09:21 HITS.pool.root.1
[2024-06-20 09:22:42] -rw------- 1 boinc boinc   2805760 20. Jun 09:22 result.tar.gz
09:22:44 (2430): run_atlas exited; CPU time 89623.941569
09:22:44 (2430): called boinc_finish(0)

</stderr_txt>
]]>

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