Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
09:56:39 (2223678): wrapper (7.7.26015): starting
09:56:39 (2223678): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 09:56:39] Arguments: --nthreads 4
[2024-06-20 09:56:39] Threads: 4
[2024-06-20 09:56:39] Checking for CVMFS
[2024-06-20 09:56:39] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 09:56:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 09:56:39] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 09:56:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 09:56:40] 2.11.2.0 8969 21062 53956 134085 2 189 3522418 4096001 6384 130560 0 106123145 99.965 6321253 1247 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-20 09:56:40] CVMFS is ok
[2024-06-20 09:56:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 09:56:40] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-20 09:56:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-20 09:56:40] Further information can be found at the LHC@home message board.
[2024-06-20 09:56:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 09:56:40] Checking for apptainer binary...
[2024-06-20 09:56:40] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 09:56:40] Running /usr/bin/apptainer --version
[2024-06-20 09:56:40] apptainer version 1.2.5
[2024-06-20 09:56:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 09:56:40] Ryzen-9-5950X-Zen3-Ubu23
[2024-06-20 09:56:40] apptainer works
[2024-06-20 09:56:40] Set ATHENA_PROC_NUMBER=4
[2024-06-20 09:56:40] Set ATHENA_CORE_NUMBER=4
[2024-06-20 09:56:40] Starting ATLAS job with PandaID=6238158974
[2024-06-20 09:56:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 18:29:41]  *** The last 200 lines of the pilot log: ***
[2024-06-20 18:29:41] 2024-06-20 16:29:27,381 | INFO     | intersect: -3455585941.9636126
[2024-06-20 18:29:41] 2024-06-20 16:29:27,381 | INFO     | chi2: 0.06833160859231101
[2024-06-20 18:29:41] 2024-06-20 16:29:27,381 | INFO     | current chi2=0.06833160859231101 (change=95.17556925222107 %)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,382 | INFO     | model: linear, x: [1718871144.0, 1718871205.0, 1718871266.0, 1718871327.0, 1718871388.0, 1718871449.0, 1718871510.0, 1718871571.0, 1718871632.0, 1718871693.0, 1718
[2024-06-20 18:29:41] 2024-06-20 16:29:27,382 | INFO     | sum of square deviations: 36257944940.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,385 | INFO     | sum of deviations: 59526523893.99999
[2024-06-20 18:29:41] 2024-06-20 16:29:27,385 | INFO     | mean x: 1718886028.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,386 | INFO     | mean y: 2358677.3496932513
[2024-06-20 18:29:41] 2024-06-20 16:29:27,386 | INFO     | -- intersect: -2819624487.612461
[2024-06-20 18:29:41] 2024-06-20 16:29:27,386 | INFO     | intersect: -2819624487.612461
[2024-06-20 18:29:41] 2024-06-20 16:29:27,386 | INFO     | chi2: 0.011191121630102337
[2024-06-20 18:29:41] 2024-06-20 16:29:27,386 | INFO     | current chi2=0.011191121630102337 (change=83.62233545990074 %)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,387 | INFO     | model: linear, x: [1718871449.0, 1718871510.0, 1718871571.0, 1718871632.0, 1718871693.0, 1718871754.0, 1718871815.0, 1718871876.0, 1718871937.0, 1718871998.0, 1718
[2024-06-20 18:29:41] 2024-06-20 16:29:27,387 | INFO     | sum of square deviations: 35157068485.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,390 | INFO     | sum of deviations: 53959483608.50001
[2024-06-20 18:29:41] 2024-06-20 16:29:27,390 | INFO     | mean x: 1718886180.5
[2024-06-20 18:29:41] 2024-06-20 16:29:27,390 | INFO     | mean y: 2359447.626033058
[2024-06-20 18:29:41] 2024-06-20 16:29:27,390 | INFO     | -- intersect: -2635807347.228875
[2024-06-20 18:29:41] 2024-06-20 16:29:27,390 | INFO     | intersect: -2635807347.228875
[2024-06-20 18:29:41] 2024-06-20 16:29:27,391 | INFO     | chi2: 0.006143241852606697
[2024-06-20 18:29:41] 2024-06-20 16:29:27,391 | INFO     | current chi2=0.006143241852606697 (change=45.10611129377458 %)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,391 | INFO     | model: linear, x: [1718871754.0, 1718871815.0, 1718871876.0, 1718871937.0, 1718871998.0, 1718872059.0, 1718872120.0, 1718872181.0, 1718872242.0, 1718872303.0, 1718
[2024-06-20 18:29:41] 2024-06-20 16:29:27,391 | INFO     | sum of square deviations: 34078704080.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,395 | INFO     | sum of deviations: 48204345613.99998
[2024-06-20 18:29:41] 2024-06-20 16:29:27,395 | INFO     | mean x: 1718886333.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,395 | INFO     | mean y: 2360260.5574112735
[2024-06-20 18:29:41] 2024-06-20 16:29:27,395 | INFO     | -- intersect: -2429005400.3140764
[2024-06-20 18:29:41] 2024-06-20 16:29:27,395 | INFO     | intersect: -2429005400.3140764
[2024-06-20 18:29:41] 2024-06-20 16:29:27,396 | INFO     | chi2: 0.002945051213122124
[2024-06-20 18:29:41] 2024-06-20 16:29:27,396 | INFO     | current chi2=0.002945051213122124 (change=52.06030816005589 %)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,396 | INFO     | model: linear, x: [1718872059.0, 1718872120.0, 1718872181.0, 1718872242.0, 1718872303.0, 1718872364.0, 1718872425.0, 1718872486.0, 1718872547.0, 1718872608.0, 1718
[2024-06-20 18:29:41] 2024-06-20 16:29:27,396 | INFO     | sum of square deviations: 33022619162.5
[2024-06-20 18:29:41] 2024-06-20 16:29:27,399 | INFO     | sum of deviations: 44225268460.99999
[2024-06-20 18:29:41] 2024-06-20 16:29:27,400 | INFO     | mean x: 1718886485.5
[2024-06-20 18:29:41] 2024-06-20 16:29:27,400 | INFO     | mean y: 2360834.7721518986
[2024-06-20 18:29:41] 2024-06-20 16:29:27,400 | INFO     | -- intersect: -2299643615.6061344
[2024-06-20 18:29:41] 2024-06-20 16:29:27,400 | INFO     | intersect: -2299643615.6061344
[2024-06-20 18:29:41] 2024-06-20 16:29:27,400 | INFO     | chi2: 0.0018108854212205861
[2024-06-20 18:29:41] 2024-06-20 16:29:27,400 | INFO     | current chi2=0.0018108854212205861 (change=38.51090218221297 %)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,401 | INFO     | model: linear, x: [1718872364.0, 1718872425.0, 1718872486.0, 1718872547.0, 1718872608.0, 1718872669.0, 1718872730.0, 1718872791.0, 1718872852.0, 1718872913.0, 1718
[2024-06-20 18:29:41] 2024-06-20 16:29:27,401 | INFO     | sum of square deviations: 31988581170.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,404 | INFO     | sum of deviations: 41571529341.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,404 | INFO     | mean x: 1718886638.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,404 | INFO     | mean y: 2361225.897654584
[2024-06-20 18:29:41] 2024-06-20 16:29:27,404 | INFO     | -- intersect: -2231459209.1419735
[2024-06-20 18:29:41] 2024-06-20 16:29:27,404 | INFO     | intersect: -2231459209.1419735
[2024-06-20 18:29:41] 2024-06-20 16:29:27,405 | INFO     | chi2: 0.001494867881157327
[2024-06-20 18:29:41] 2024-06-20 16:29:27,405 | INFO     | current chi2=0.001494867881157327 (change=17.45099586975827 %)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,405 | INFO     | left removable region: 70
[2024-06-20 18:29:41] 2024-06-20 16:29:27,405 | INFO     | model: linear, x: [1718874499.0, 1718874560.0, 1718874621.0, 1718874682.0, 1718874743.0, 1718874804.0, 1718874865.0, 1718874926.0, 1718874987.0, 1718875048.0, 1718
[2024-06-20 18:29:41] 2024-06-20 16:29:27,405 | INFO     | sum of square deviations: 24311253967.0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,408 | INFO     | sum of deviations: 28991146486.499996
[2024-06-20 18:29:41] 2024-06-20 16:29:27,408 | INFO     | mean x: 1718887522.5
[2024-06-20 18:29:41] 2024-06-20 16:29:27,408 | INFO     | mean y: 2362985.1471962617
[2024-06-20 18:29:41] 2024-06-20 16:29:27,408 | INFO     | -- intersect: -2047408697.804947
[2024-06-20 18:29:41] 2024-06-20 16:29:27,408 | INFO     | intersect: -2047408697.804947
[2024-06-20 18:29:41] 2024-06-20 16:29:27,409 | INFO     | chi2: 0.0009550556117060449
[2024-06-20 18:29:41] 2024-06-20 16:29:27,409 | INFO     | -- intersect: -2047408697.804947
[2024-06-20 18:29:41] 2024-06-20 16:29:27,409 | INFO     | current memory leak: 1.19 B/s (using 428 data points, chi2=0.00)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,409 | INFO     | ..............................
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | . Timing measurements:
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | . get job = 0 s
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | . initial setup = 1 s
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | . payload setup = 3 s
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | . stage-in = 0 s
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | . payload execution = 30733 s
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | . stage-out = 0 s
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | . log creation = 0 s
[2024-06-20 18:29:41] 2024-06-20 16:29:27,410 | INFO     | ..............................
[2024-06-20 18:29:41] 2024-06-20 16:29:27,743 | INFO     | 
[2024-06-20 18:29:41] 2024-06-20 16:29:27,743 | INFO     | job summary report
[2024-06-20 18:29:41] 2024-06-20 16:29:27,743 | INFO     | --------------------------------------------------
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | PanDA job id: 6238158974
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | task id: 38921013
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | errors: (none)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | pilot state: finished 
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | transexitcode: 0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | exeerrorcode: 0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | exeerrordiag: 
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | exitcode: 0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | exitmsg: OK
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | cpuconsumptiontime: 117955 s
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | nevents: 400
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | neventsw: 0
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | pid: 2234760
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | pgrp: 2234760
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | corecount: 4
[2024-06-20 18:29:41] 2024-06-20 16:29:27,744 | INFO     | event service: False
[2024-06-20 18:29:41] 2024-06-20 16:29:27,745 | INFO     | sizes: {0: 2386114, 1: 2387049, 4: 2387255, 11: 2387283, 30741: 2425331, 30742: 2434305, 30743: 2434489, 30746: 2434659}
[2024-06-20 18:29:41] 2024-06-20 16:29:27,745 | INFO     | --------------------------------------------------
[2024-06-20 18:29:41] 2024-06-20 16:29:27,745 | INFO     | 
[2024-06-20 18:29:41] 2024-06-20 16:29:27,745 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | job 6238158974 has completed (purged errors)
[2024-06-20 18:29:41] 2024-06-20 16:29:27,767 | INFO     | overall cleanup function is called
[2024-06-20 18:29:41] 2024-06-20 16:29:28,775 | INFO     | --- collectZombieJob: --- 10, [2234760]
[2024-06-20 18:29:41] 2024-06-20 16:29:28,775 | INFO     | zombie collector waiting for pid 2234760
[2024-06-20 18:29:41] 2024-06-20 16:29:28,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 18:29:41] 2024-06-20 16:29:29,781 | INFO     | collected zombie processes
[2024-06-20 18:29:41] 2024-06-20 16:29:29,781 | INFO     | will now attempt to kill all subprocesses of pid=2234760
[2024-06-20 18:29:41] 2024-06-20 16:29:29,850 | INFO     | process IDs to be killed: [2234760] (in reverse order)
[2024-06-20 18:29:41] 2024-06-20 16:29:29,909 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 18:29:41] 2024-06-20 16:29:29,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 18:29:41] 2024-06-20 16:29:29,913 | INFO     | did not find any defunct processes belonging to 2234760
[2024-06-20 18:29:41] 2024-06-20 16:29:29,916 | INFO     | did not find any defunct processes belonging to 2234760
[2024-06-20 18:29:41] 2024-06-20 16:29:29,917 | INFO     | ready for new job
[2024-06-20 18:29:41] 2024-06-20 16:29:29,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 18:29:41] 2024-06-20 16:29:29,919 | INFO     | *************************************
[2024-06-20 18:29:41] 2024-06-20 16:29:29,919 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 18:29:41] 2024-06-20 16:29:29,919 | INFO     | *************************************
[2024-06-20 18:29:41] 2024-06-20 16:29:29,919 | INFO     | 
[2024-06-20 18:29:41] 2024-06-20 16:29:29,921 | INFO     | architecture information:
[2024-06-20 18:29:41] 2024-06-20 16:29:29,921 | INFO     | executing command: cat /etc/os-release
[2024-06-20 18:29:41] 2024-06-20 16:29:29,935 | INFO     | cat /etc/os-release:
[2024-06-20 18:29:41] NAME="CentOS Linux"
[2024-06-20 18:29:41] VERSION="7 (Core)"
[2024-06-20 18:29:41] ID="centos"
[2024-06-20 18:29:41] ID_LIKE="rhel fedora"
[2024-06-20 18:29:41] VERSION_ID="7"
[2024-06-20 18:29:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 18:29:41] ANSI_COLOR="0;31"
[2024-06-20 18:29:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 18:29:41] HOME_URL="https://www.centos.org/"
[2024-06-20 18:29:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 18:29:41] 
[2024-06-20 18:29:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 18:29:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 18:29:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 18:29:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 18:29:41] 
[2024-06-20 18:29:41] 2024-06-20 16:29:29,935 | INFO     | *************************************
[2024-06-20 18:29:41] 2024-06-20 16:29:30,438 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2024-06-20 18:29:41] 2024-06-20 16:29:30,453 | INFO     | sufficient remaining disk space (1975879991296 B)
[2024-06-20 18:29:41] 2024-06-20 16:29:30,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 18:29:41] 2024-06-20 16:29:30,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 18:29:41] 2024-06-20 16:29:30,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 18:29:41] 2024-06-20 16:29:30,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 18:29:41] 2024-06-20 16:29:30,454 | INFO     | aborting loop
[2024-06-20 18:29:41] 2024-06-20 16:29:30,454 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-20 18:29:41] 2024-06-20 16:29:30,454 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 18:29:41] 2024-06-20 16:29:30,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 18:29:41] 2024-06-20 16:29:30,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 18:29:41] 2024-06-20 16:29:30,891 | INFO     | all job control threads have been joined
[2024-06-20 18:29:41] 2024-06-20 16:29:31,007 | INFO     | all data control threads have been joined
[2024-06-20 18:29:41] 2024-06-20 16:29:31,454 | INFO     | [job] retrieve thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:31,459 | INFO     | [job] job monitor thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:31,791 | INFO     | [payload] validate_post thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:31,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 18:29:41] 2024-06-20 16:29:31,896 | INFO     | [job] control thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:31,934 | INFO     | all payload control threads have been joined
[2024-06-20 18:29:41] 2024-06-20 16:29:32,011 | INFO     | [data] control thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:32,030 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:32,237 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:32,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 18:29:41] 2024-06-20 16:29:32,531 | INFO     | [job] validate thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:32,722 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:32,735 | INFO     | [data] copytool_in thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:32,872 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:32,939 | INFO     | [payload] control thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:32,943 | INFO     | [payload] failed_post thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:33,494 | INFO     | [job] queue monitor thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:33,819 | INFO     | [data] copytool_out thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:34,459 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 18:29:41] 2024-06-20 16:29:36,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123758236985152)>', '<ExcThread(monitor, started 123757402257152)>']
[2024-06-20 18:29:41] 2024-06-20 16:29:36,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 18:29:41] 2024-06-20 16:29:36,480 | INFO     | [monitor] control thread has ended
[2024-06-20 18:29:41] 2024-06-20 16:29:41,039 | INFO     | all workflow threads have been joined
[2024-06-20 18:29:41] 2024-06-20 16:29:41,039 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 18:29:41] 2024-06-20 16:29:41,039 | INFO     | traces error code: 0
[2024-06-20 18:29:41] 2024-06-20 16:29:41,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 18:29:41] 2024-06-20 16:29:41,108 [wrapper] ==== pilot stdout END ====
[2024-06-20 18:29:41] 2024-06-20 16:29:41,110 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 18:29:41] 2024-06-20 16:29:41,112 [wrapper] pilotpid: 2228048
[2024-06-20 18:29:41] 2024-06-20 16:29:41,114 [wrapper] Pilot exit status: 0
[2024-06-20 18:29:41] 2024-06-20 16:29:41,121 [wrapper] pandaids: 6238158974
[2024-06-20 18:29:41] 2024-06-20 16:29:41,155 [wrapper] cleanup supervisor_pilot 2733283 2228049
[2024-06-20 18:29:41] 2024-06-20 16:29:41,158 [wrapper] Test setup, not cleaning
[2024-06-20 18:29:41] 2024-06-20 16:29:41,160 [wrapper] ==== wrapper stdout END ====
[2024-06-20 18:29:41] 2024-06-20 16:29:41,162 [wrapper] ==== wrapper stderr END ====
[2024-06-20 18:29:41] 2024-06-20 16:29:41,166 [wrapper] apfmon messages muted
[2024-06-20 18:29:41]  *** Error codes and diagnostics ***
[2024-06-20 18:29:41]     "exeErrorCode": 0,
[2024-06-20 18:29:41]     "exeErrorDiag": "",
[2024-06-20 18:29:41]     "pilotErrorCode": 0,
[2024-06-20 18:29:41]     "pilotErrorDiag": "",
[2024-06-20 18:29:41]  *** Listing of results directory ***
[2024-06-20 18:29:41] total 879356
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc    469766 Jun 19 19:07 pilot3.tar.gz
[2024-06-20 18:29:41] -rwx------ 1 boinc boinc     32308 Jun 19 19:32 runpilot2-wrapper.sh
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc      5654 Jun 19 19:32 queuedata.json
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc       100 Jun 20 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 18:29:41] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 09:56 run_atlas
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc       105 Jun 20 09:56 job.xml
[2024-06-20 18:29:41] -rw-r--r-- 2 boinc boinc     17537 Jun 20 09:56 start_atlas.sh
[2024-06-20 18:29:41] drwxrwx--x 2 boinc boinc      4096 Jun 20 09:56 shared
[2024-06-20 18:29:41] -rw-r--r-- 2 boinc boinc    482517 Jun 20 09:56 input.tar.gz
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc      6774 Jun 20 09:56 init_data.xml
[2024-06-20 18:29:41] -rw-r--r-- 2 boinc boinc 541508700 Jun 20 09:56 EVNT.38776210._000964.pool.root.1
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc         0 Jun 20 09:56 boinc_lockfile
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc      2645 Jun 20 09:56 pandaJob.out
[2024-06-20 18:29:41] -rw------- 1 boinc boinc       424 Jun 20 09:56 setup.sh.local
[2024-06-20 18:29:41] -rw------- 1 boinc boinc   1015943 Jun 20 09:56 agis_schedconf.cvmfs.json
[2024-06-20 18:29:41] -rw------- 1 boinc boinc   1321254 Jun 20 09:56 cric_ddmendpoints.json
[2024-06-20 18:29:41] drwx------ 4 boinc boinc      4096 Jun 20 09:56 pilot3
[2024-06-20 18:29:41] -rw------- 1 boinc boinc 346901952 Jun 20 18:28 HITS.38921013._049084.pool.root.1
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc       533 Jun 20 18:28 boinc_task_state.xml
[2024-06-20 18:29:41] -rw------- 1 boinc boinc        95 Jun 20 18:29 pilot_heartbeat.json
[2024-06-20 18:29:41] -rw------- 1 boinc boinc      1028 Jun 20 18:29 memory_monitor_summary.json
[2024-06-20 18:29:41] -rw------- 1 boinc boinc         0 Jun 20 18:29 agis_ddmendpoints.agis.ALL.json
[2024-06-20 18:29:41] -rw------- 1 boinc boinc    520777 Jun 20 18:29 log.38921013._049084.job.log.tgz.1
[2024-06-20 18:29:41] -rw------- 1 boinc boinc      7690 Jun 20 18:29 heartbeat.json
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc      8192 Jun 20 18:29 boinc_mmap_file
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc        29 Jun 20 18:29 wrapper_checkpoint.txt
[2024-06-20 18:29:41] -rw------- 1 boinc boinc      4343 Jun 20 18:29 pilotlog.txt
[2024-06-20 18:29:41] -rw------- 1 boinc boinc   3736374 Jun 20 18:29 log.38921013._049084.job.log.1
[2024-06-20 18:29:41] -rw------- 1 boinc boinc       357 Jun 20 18:29 output.list
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc       620 Jun 20 18:29 runtime_log
[2024-06-20 18:29:41] -rw------- 1 boinc boinc   4280320 Jun 20 18:29 result.tar.gz
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc     11153 Jun 20 18:29 runtime_log.err
[2024-06-20 18:29:41] -rw------- 1 boinc boinc       649 Jun 20 18:29 cUmMDmwLEe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmULkKDmyXutnm.diag
[2024-06-20 18:29:41] -rw-r--r-- 1 boinc boinc     21728 Jun 20 18:29 stderr.txt
[2024-06-20 18:29:41] HITS file was successfully produced:
[2024-06-20 18:29:41] -rw------- 1 boinc boinc 346901952 Jun 20 18:28 shared/HITS.pool.root.1
[2024-06-20 18:29:41]  *** Contents of shared directory: ***
[2024-06-20 18:29:41] total 872272
[2024-06-20 18:29:41] -rw-r--r-- 2 boinc boinc     17537 Jun 20 09:56 start_atlas.sh
[2024-06-20 18:29:41] -rw-r--r-- 2 boinc boinc    482517 Jun 20 09:56 input.tar.gz
[2024-06-20 18:29:41] -rw-r--r-- 2 boinc boinc 541508700 Jun 20 09:56 ATLAS.root_0
[2024-06-20 18:29:41] -rw------- 1 boinc boinc 346901952 Jun 20 18:28 HITS.pool.root.1
[2024-06-20 18:29:41] -rw------- 1 boinc boinc   4280320 Jun 20 18:29 result.tar.gz
18:29:42 (2223678): run_atlas exited; CPU time 117758.461226
18:29:42 (2223678): called boinc_finish(0)

</stderr_txt>
]]>

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