Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:34:16 (199137): wrapper (7.7.26015): starting
20:34:16 (199137): wrapper: running run_atlas (--nthreads 8)
[2024-06-19 20:34:16] Arguments: --nthreads 8
[2024-06-19 20:34:16] Threads: 8
[2024-06-19 20:34:16] Checking for CVMFS
[2024-06-19 20:34:17] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-19 20:34:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-19 20:34:18] Running cvmfs_config stat atlas.cern.ch
[2024-06-19 20:34:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-19 20:34:19] 2.11.2.0 125836 19214 107076 134072 1 131 14866682 18432000 20573 130560 0 99919372 99.460 104532171 37466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-19 20:34:19] CVMFS is ok
[2024-06-19 20:34:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-19 20:34:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-19 20:34:19] Further information can be found at the LHC@home message board.
[2024-06-19 20:34:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-19 20:34:19] Checking for apptainer binary...
[2024-06-19 20:34:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-19 20:34:19] Running /usr/bin/apptainer --version
[2024-06-19 20:34:19] apptainer version 1.3.1-1.el7
[2024-06-19 20:34:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-19 20:34:46] c-211-35-2.aglt2.org
[2024-06-19 20:34:46] apptainer works
[2024-06-19 20:34:46] Set ATHENA_PROC_NUMBER=8
[2024-06-19 20:34:46] Set ATHENA_CORE_NUMBER=8
[2024-06-19 20:34:46] Starting ATLAS job with PandaID=6238156710
[2024-06-19 20:34:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 16:32:13]  *** The last 200 lines of the pilot log: ***
[2024-06-20 16:32:14] 2024-06-20 20:31:38,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:32:14] 2024-06-20 20:31:40,810 | INFO     | monitor loop #4749: job 0:6238156710 is in state 'finished'
[2024-06-20 16:32:14] 2024-06-20 20:31:40,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:32:14] 2024-06-20 20:31:43,340 | INFO     | monitor loop #4750: job 0:6238156710 is in state 'finished'
[2024-06-20 16:32:14] 2024-06-20 20:31:43,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:32:14] 2024-06-20 20:31:45,845 | INFO     | monitor loop #4751: job 0:6238156710 is in state 'finished'
[2024-06-20 16:32:14] 2024-06-20 20:31:45,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:32:14] 2024-06-20 20:31:48,361 | INFO     | monitor loop #4752: job 0:6238156710 is in state 'finished'
[2024-06-20 16:32:14] 2024-06-20 20:31:48,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:32:14] 2024-06-20 20:31:50,866 | INFO     | monitor loop #4753: job 0:6238156710 is in state 'finished'
[2024-06-20 16:32:14] 2024-06-20 20:31:50,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 16:32:14] 2024-06-20 20:31:52,067 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-20 16:32:14] 2024-06-20 20:31:52,067 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6238156710/memory_monitor_summary.json (trf name=prmon)
[2024-06-20 16:32:14] 2024-06-20 20:31:52,068 | INFO     | extracted standard info from prmon json
[2024-06-20 16:32:14] 2024-06-20 20:31:52,068 | INFO     | extracted standard memory fields from prmon json
[2024-06-20 16:32:14] 2024-06-20 20:31:52,068 | WARNING  | GPU info not found in prmon json
[2024-06-20 16:32:14] 2024-06-20 20:31:52,069 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-20 16:32:14] 2024-06-20 20:31:52,069 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 16:32:14] 2024-06-20 20:31:52,114 | INFO     | fitting pss+swap vs Time
[2024-06-20 16:32:14] 2024-06-20 20:31:52,116 | INFO     | model: linear, x: [1718844243.0, 1718844304.0, 1718844365.0, 1718844426.0, 1718844487.0, 1718844548.0, 1718844609.0, 1718844670.0, 1718844731.0, 1718844792.0, 1718
[2024-06-20 16:32:14] 2024-06-20 20:31:52,116 | INFO     | sum of square deviations: 494089556801.8048
[2024-06-20 16:32:14] 2024-06-20 20:31:52,198 | INFO     | sum of deviations: 3152858773514.662
[2024-06-20 16:32:14] 2024-06-20 20:31:52,198 | INFO     | mean x: 1718879836.6900685
[2024-06-20 16:32:14] 2024-06-20 20:31:52,198 | INFO     | mean y: 2448920.4272260275
[2024-06-20 16:32:14] 2024-06-20 20:31:52,198 | INFO     | -- intersect: -10965978359.851482
[2024-06-20 16:32:14] 2024-06-20 20:31:52,199 | INFO     | intersect: -10965978359.851482
[2024-06-20 16:32:14] 2024-06-20 20:31:52,200 | INFO     | chi2: 26.246384149110952
[2024-06-20 16:32:14] 2024-06-20 20:31:52,206 | INFO     | model: linear, x: [1718844243.0, 1718844304.0, 1718844365.0, 1718844426.0, 1718844487.0, 1718844548.0, 1718844609.0, 1718844670.0, 1718844731.0, 1718844792.0, 1718
[2024-06-20 16:32:14] 2024-06-20 20:31:52,206 | INFO     | sum of square deviations: 487771332717.0044
[2024-06-20 16:32:14] 2024-06-20 20:31:52,323 | INFO     | sum of deviations: 3466714503476.6475
[2024-06-20 16:32:14] 2024-06-20 20:31:52,324 | INFO     | mean x: 1718879684.1900258
[2024-06-20 16:32:14] 2024-06-20 20:31:52,324 | INFO     | mean y: 2456489.2278589853
[2024-06-20 16:32:14] 2024-06-20 20:31:52,324 | INFO     | -- intersect: -12214057133.499004
[2024-06-20 16:32:14] 2024-06-20 20:31:52,324 | INFO     | intersect: -12214057133.499004
[2024-06-20 16:32:14] 2024-06-20 20:31:52,334 | INFO     | chi2: 23.02607815335048
[2024-06-20 16:32:14] 2024-06-20 20:31:52,334 | INFO     | current chi2=23.02607815335048 (change=12.269522451036574 %)
[2024-06-20 16:32:14] 2024-06-20 20:31:52,334 | INFO     | right removable region: 1162
[2024-06-20 16:32:14] 2024-06-20 20:31:52,335 | INFO     | model: linear, x: [1718844548.0, 1718844609.0, 1718844670.0, 1718844731.0, 1718844792.0, 1718844853.0, 1718844914.0, 1718844975.0, 1718845036.0, 1718845097.0, 1718
[2024-06-20 16:32:14] 2024-06-20 20:31:52,336 | INFO     | sum of square deviations: 487771268301.6221
[2024-06-20 16:32:14] 2024-06-20 20:31:52,520 | INFO     | sum of deviations: 2733939838188.6567
[2024-06-20 16:32:14] 2024-06-20 20:31:52,520 | INFO     | mean x: 1718879989.1908855
[2024-06-20 16:32:14] 2024-06-20 20:31:52,538 | INFO     | mean y: 2459030.6096302667
[2024-06-20 16:32:14] 2024-06-20 20:31:52,539 | INFO     | -- intersect: -9631799452.627527
[2024-06-20 16:32:14] 2024-06-20 20:31:52,539 | INFO     | intersect: -9631799452.627527
[2024-06-20 16:32:14] 2024-06-20 20:31:52,540 | INFO     | chi2: 21.19438841460077
[2024-06-20 16:32:14] 2024-06-20 20:31:52,541 | INFO     | current chi2=21.19438841460077 (change=19.24834943285439 %)
[2024-06-20 16:32:14] 2024-06-20 20:31:52,541 | INFO     | left removable region: 10
[2024-06-20 16:32:14] 2024-06-20 20:31:52,558 | INFO     | model: linear, x: [1718844853.0, 1718844914.0, 1718844975.0, 1718845036.0, 1718845097.0, 1718845158.0, 1718845219.0, 1718845280.0, 1718845341.0, 1718845402.0, 1718
[2024-06-20 16:32:14] 2024-06-20 20:31:52,559 | INFO     | sum of square deviations: 474061209213.603
[2024-06-20 16:32:14] 2024-06-20 20:31:52,666 | INFO     | sum of deviations: 2687698013385.4795
[2024-06-20 16:32:14] 2024-06-20 20:31:52,667 | INFO     | mean x: 1718879958.6918402
[2024-06-20 16:32:14] 2024-06-20 20:31:52,667 | INFO     | mean y: 2475385.4661458335
[2024-06-20 16:32:14] 2024-06-20 20:31:52,667 | INFO     | -- intersect: -9742743502.803122
[2024-06-20 16:32:14] 2024-06-20 20:31:52,667 | INFO     | intersect: -9742743502.803122
[2024-06-20 16:32:14] 2024-06-20 20:31:52,686 | INFO     | chi2: 14.353026451576293
[2024-06-20 16:32:14] 2024-06-20 20:31:52,686 | INFO     | -- intersect: -9742743502.803122
[2024-06-20 16:32:14] 2024-06-20 20:31:52,686 | INFO     | current memory leak: 5.67 B/s (using 1152 data points, chi2=14.35)
[2024-06-20 16:32:14] 2024-06-20 20:31:52,688 | INFO     | ..............................
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | . Timing measurements:
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | . get job = 0 s
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | . initial setup = 20 s
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | . payload setup = 121 s
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | . stage-in = 0 s
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | . payload execution = 71317 s
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | . stage-out = 8 s
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | . log creation = 1 s
[2024-06-20 16:32:14] 2024-06-20 20:31:52,705 | INFO     | ..............................
[2024-06-20 16:32:14] 2024-06-20 20:31:53,092 | INFO     | 
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | job summary report
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | --------------------------------------------------
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | PanDA job id: 6238156710
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | task id: 38921013
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | errors: (none)
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | pilot state: finished 
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | transexitcode: 0
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | exeerrorcode: 0
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | exeerrordiag: 
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | exitcode: 0
[2024-06-20 16:32:14] 2024-06-20 20:31:53,093 | INFO     | exitmsg: OK
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | cpuconsumptiontime: 182382 s
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | nevents: 400
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | neventsw: 0
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | pid: 260940
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | pgrp: 260940
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | corecount: 8
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | event service: False
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | sizes: {0: 2384998, 1: 2385197, 2: 2385225, 13: 2385225, 24: 2385281, 35: 2385309, 46: 2385465, 56: 2385493, 64: 2385727, 67: 2385783, 71442: 2442873, 71443: 24431
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | --------------------------------------------------
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | 
[2024-06-20 16:32:14] 2024-06-20 20:31:53,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-20 16:32:14] 2024-06-20 20:31:53,325 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,325 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 16:32:14] 2024-06-20 20:31:53,327 | INFO     | job 6238156710 has completed (purged errors)
[2024-06-20 16:32:14] 2024-06-20 20:31:53,328 | INFO     | overall cleanup function is called
[2024-06-20 16:32:14] 2024-06-20 20:31:54,340 | INFO     | --- collectZombieJob: --- 10, [260940]
[2024-06-20 16:32:14] 2024-06-20 20:31:54,341 | INFO     | zombie collector waiting for pid 260940
[2024-06-20 16:32:14] 2024-06-20 20:31:54,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 16:32:14] 2024-06-20 20:31:55,346 | INFO     | collected zombie processes
[2024-06-20 16:32:14] 2024-06-20 20:31:55,347 | INFO     | will now attempt to kill all subprocesses of pid=260940
[2024-06-20 16:32:14] 2024-06-20 20:31:56,324 | INFO     | process IDs to be killed: [260940] (in reverse order)
[2024-06-20 16:32:14] 2024-06-20 20:31:57,206 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 16:32:14] 2024-06-20 20:31:57,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 16:32:14] 2024-06-20 20:31:57,223 | INFO     | did not find any defunct processes belonging to 260940
[2024-06-20 16:32:14] 2024-06-20 20:31:57,263 | INFO     | did not find any defunct processes belonging to 260940
[2024-06-20 16:32:14] 2024-06-20 20:31:57,263 | INFO     | ready for new job
[2024-06-20 16:32:14] 2024-06-20 20:31:57,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 16:32:14] 2024-06-20 20:31:57,273 | INFO     | *************************************
[2024-06-20 16:32:14] 2024-06-20 20:31:57,273 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 16:32:14] 2024-06-20 20:31:57,273 | INFO     | *************************************
[2024-06-20 16:32:14] 2024-06-20 20:31:57,273 | INFO     | 
[2024-06-20 16:32:14] 2024-06-20 20:31:57,279 | INFO     | architecture information:
[2024-06-20 16:32:14] 2024-06-20 20:31:57,288 | INFO     | executing command: cat /etc/os-release
[2024-06-20 16:32:14] 2024-06-20 20:31:57,416 | INFO     | cat /etc/os-release:
[2024-06-20 16:32:14] NAME="CentOS Linux"
[2024-06-20 16:32:14] VERSION="7 (Core)"
[2024-06-20 16:32:14] ID="centos"
[2024-06-20 16:32:14] ID_LIKE="rhel fedora"
[2024-06-20 16:32:14] VERSION_ID="7"
[2024-06-20 16:32:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 16:32:14] ANSI_COLOR="0;31"
[2024-06-20 16:32:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 16:32:14] HOME_URL="https://www.centos.org/"
[2024-06-20 16:32:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 16:32:14] 
[2024-06-20 16:32:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 16:32:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 16:32:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 16:32:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 16:32:14] 
[2024-06-20 16:32:14] 2024-06-20 20:31:57,417 | INFO     | *************************************
[2024-06-20 16:32:14] 2024-06-20 20:31:57,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-20 16:32:14] 2024-06-20 20:31:58,062 | INFO     | sufficient remaining disk space (99317972992 B)
[2024-06-20 16:32:14] 2024-06-20 20:31:58,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 16:32:14] 2024-06-20 20:31:58,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 16:32:14] 2024-06-20 20:31:58,063 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-20 16:32:14] 2024-06-20 20:31:58,063 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 16:32:14] 2024-06-20 20:31:58,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 16:32:14] 2024-06-20 20:31:58,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 16:32:14] 2024-06-20 20:31:58,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 16:32:14] 2024-06-20 20:31:58,283 | INFO     | all job control threads have been joined
[2024-06-20 16:32:14] 2024-06-20 20:31:58,409 | INFO     | all data control threads have been joined
[2024-06-20 16:32:14] 2024-06-20 20:31:58,437 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-20 16:32:14] 2024-06-20 20:31:58,438 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-20 16:32:14] 2024-06-20 20:31:58,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 16:32:14] 2024-06-20 20:31:58,438 | INFO     | will abort loop
[2024-06-20 16:32:14] 2024-06-20 20:31:58,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 16:32:14] 2024-06-20 20:31:58,723 | INFO     | all payload control threads have been joined
[2024-06-20 16:32:14] 2024-06-20 20:31:59,068 | INFO     | [job] retrieve thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,112 | INFO     | [job] queue monitor thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,237 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,240 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,287 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,289 | INFO     | [job] control thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,415 | INFO     | [data] control thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,443 | INFO     | [job] job monitor thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,702 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,729 | INFO     | [payload] control thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:31:59,876 | INFO     | [payload] validate_post thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:32:00,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 16:32:14] 2024-06-20 20:32:00,160 | INFO     | [job] validate thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:32:00,294 | INFO     | [payload] failed_post thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:32:00,408 | INFO     | [data] copytool_in thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:32:00,487 | INFO     | [data] copytool_out thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:32:04,164 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 16:32:14] 2024-06-20 20:32:04,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726381188928)>', '<ExcThread(monitor, started 139725813835520)>']
[2024-06-20 16:32:14] 2024-06-20 20:32:05,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 16:32:14] 2024-06-20 20:32:05,109 | INFO     | [monitor] control thread has ended
[2024-06-20 16:32:14] 2024-06-20 20:32:09,824 | INFO     | all workflow threads have been joined
[2024-06-20 16:32:14] 2024-06-20 20:32:09,825 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 16:32:14] 2024-06-20 20:32:09,825 | INFO     | traces error code: 0
[2024-06-20 16:32:14] 2024-06-20 20:32:09,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 16:32:14] 2024-06-20 20:32:11,035 [wrapper] ==== pilot stdout END ====
[2024-06-20 16:32:14] 2024-06-20 20:32:11,067 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 16:32:14] 2024-06-20 20:32:11,096 [wrapper] pilotpid: 222075
[2024-06-20 16:32:14] 2024-06-20 20:32:11,134 [wrapper] Pilot exit status: 0
[2024-06-20 16:32:14] 2024-06-20 20:32:11,313 [wrapper] pandaids: 6238156710
[2024-06-20 16:32:14] 2024-06-20 20:32:12,281 [wrapper] cleanup supervisor_pilot  23078 222076
[2024-06-20 16:32:14] 2024-06-20 20:32:12,320 [wrapper] Test setup, not cleaning
[2024-06-20 16:32:14] 2024-06-20 20:32:12,355 [wrapper] ==== wrapper stdout END ====
[2024-06-20 16:32:14] 2024-06-20 20:32:12,384 [wrapper] ==== wrapper stderr END ====
[2024-06-20 16:32:14] 2024-06-20 20:32:12,470 [wrapper] apfmon messages muted
[2024-06-20 16:32:14]  *** Error codes and diagnostics ***
[2024-06-20 16:32:14]     "exeErrorCode": 0,
[2024-06-20 16:32:14]     "exeErrorDiag": "",
[2024-06-20 16:32:14]     "pilotErrorCode": 0,
[2024-06-20 16:32:14]     "pilotErrorDiag": "",
[2024-06-20 16:32:14]  *** Listing of results directory ***
[2024-06-20 16:32:14] total 889240
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas    469766 Jun 19 13:07 pilot3.tar.gz
[2024-06-20 16:32:14] -rwx------ 1 boincer umatlas     32308 Jun 19 13:26 runpilot2-wrapper.sh
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas      5654 Jun 19 13:26 queuedata.json
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas       100 Jun 19 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 16:32:14] -rwxr-xr-x 1 boincer umatlas      7986 Jun 19 20:33 run_atlas
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas       105 Jun 19 20:33 job.xml
[2024-06-20 16:32:14] -rw-r--r-- 2 boincer umatlas 543260918 Jun 19 20:34 EVNT.38776210._000450.pool.root.1
[2024-06-20 16:32:14] -rw-r--r-- 2 boincer umatlas     17537 Jun 19 20:34 start_atlas.sh
[2024-06-20 16:32:14] drwxrwx--x 2 boincer umatlas      4096 Jun 19 20:34 shared
[2024-06-20 16:32:14] -rw-r--r-- 2 boincer umatlas    482520 Jun 19 20:34 input.tar.gz
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas         0 Jun 19 20:34 boinc_lockfile
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas      2645 Jun 19 20:34 pandaJob.out
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas       467 Jun 19 20:35 setup.sh.local
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas   1021700 Jun 19 20:37 agis_schedconf.cvmfs.json
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas   1320365 Jun 19 20:37 cric_ddmendpoints.json
[2024-06-20 16:32:14] drwx------ 4 boincer umatlas      4096 Jun 19 20:37 pilot3
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas 346211736 Jun 20 16:27 HITS.38921013._049078.pool.root.1
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas       533 Jun 20 16:27 boinc_task_state.xml
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas      6385 Jun 20 16:28 init_data.xml
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas      1069 Jun 20 16:30 memory_monitor_summary.json
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas         0 Jun 20 16:30 agis_ddmendpoints.agis.ALL.json
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas   1057362 Jun 20 16:30 log.38921013._049078.job.log.tgz.1
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas        95 Jun 20 16:31 pilot_heartbeat.json
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas      7799 Jun 20 16:31 heartbeat.json
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas      4520 Jun 20 16:32 pilotlog.txt
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas      8192 Jun 20 16:32 boinc_mmap_file
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas        29 Jun 20 16:32 wrapper_checkpoint.txt
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas   7726380 Jun 20 16:32 log.38921013._049078.job.log.1
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas       357 Jun 20 16:32 output.list
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas       620 Jun 20 16:32 runtime_log
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas   8806400 Jun 20 16:32 result.tar.gz
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas     11415 Jun 20 16:32 runtime_log.err
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas       656 Jun 20 16:32 nbzNDmuFEe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmmrWKDmeghHNm.diag
[2024-06-20 16:32:14] -rw-r--r-- 1 boincer umatlas     21933 Jun 20 16:32 stderr.txt
[2024-06-20 16:32:14] HITS file was successfully produced:
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas 346211736 Jun 20 16:27 shared/HITS.pool.root.1
[2024-06-20 16:32:14]  *** Contents of shared directory: ***
[2024-06-20 16:32:14] total 877732
[2024-06-20 16:32:14] -rw-r--r-- 2 boincer umatlas 543260918 Jun 19 20:34 ATLAS.root_0
[2024-06-20 16:32:14] -rw-r--r-- 2 boincer umatlas     17537 Jun 19 20:34 start_atlas.sh
[2024-06-20 16:32:14] -rw-r--r-- 2 boincer umatlas    482520 Jun 19 20:34 input.tar.gz
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas 346211736 Jun 20 16:27 HITS.pool.root.1
[2024-06-20 16:32:14] -rw------- 1 boincer umatlas   8806400 Jun 20 16:32 result.tar.gz
16:32:15 (199137): run_atlas exited; CPU time 181305.000188
16:32:15 (199137): called boinc_finish(0)

</stderr_txt>
]]>

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