Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-21 02:57:51 (19811): Detected: vboxwrapper 26206
2024-06-21 02:57:51 (19811): Detected: BOINC client v7.24.1
2024-06-21 02:57:51 (19811): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-06-21 02:57:51 (19811): Successfully copied 'init_data.xml' to the shared directory.
2024-06-21 02:57:51 (19811): Create VM. (boinc_f1207f533914567b, slot#0)
2024-06-21 02:57:52 (19811): Setting Memory Size for VM. (4600MB)
2024-06-21 02:57:52 (19811): Setting CPU Count for VM. (6)
2024-06-21 02:57:52 (19811): Setting Chipset Options for VM.
2024-06-21 02:57:52 (19811): Setting Graphics Controller Options for VM.
2024-06-21 02:57:52 (19811): Setting Boot Options for VM.
2024-06-21 02:57:52 (19811): Setting Network Configuration for NAT.
2024-06-21 02:57:53 (19811): Enabling VM Network Access.
2024-06-21 02:57:53 (19811): Disabling USB Support for VM.
2024-06-21 02:57:53 (19811): Disabling COM Port Support for VM.
2024-06-21 02:57:53 (19811): Disabling LPT Port Support for VM.
2024-06-21 02:57:53 (19811): Disabling Audio Support for VM.
2024-06-21 02:57:53 (19811): Disabling Clipboard Support for VM.
2024-06-21 02:57:54 (19811): Disabling Drag and Drop Support for VM.
2024-06-21 02:57:54 (19811): Adding storage controller(s) to VM.
2024-06-21 02:57:54 (19811): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-21 02:57:56 (19811): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-21 02:57:56 (19811): forwarding host port 47281 to guest port 80
2024-06-21 02:57:56 (19811): Enabling remote desktop for VM.
2024-06-21 02:57:56 (19811): Required extension pack not installed, remote desktop not enabled.
2024-06-21 02:57:56 (19811): Enabling shared directory for VM.
2024-06-21 02:57:57 (19811): Starting VM using VBoxManage interface. (boinc_f1207f533914567b, slot#0)
2024-06-21 02:57:58 (19811): Successfully started VM. (PID = '20065')
2024-06-21 02:57:58 (19811): Reporting VM Process ID to BOINC.
2024-06-21 02:57:58 (19811): Guest Log: BIOS: VirtualBox 7.0.14
2024-06-21 02:57:58 (19811): Guest Log: CPUID EDX: 0x178bfbff
2024-06-21 02:57:58 (19811): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-21 02:57:58 (19811): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-21 02:57:58 (19811): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-21 02:57:58 (19811): Detected: Web Application Enabled (http://localhost:47281)
2024-06-21 02:57:58 (19811): Preference change detected
2024-06-21 02:57:58 (19811): Setting CPU throttle for VM. (50%)
2024-06-21 02:57:58 (19811): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-21 02:58:00 (19811): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-21 02:58:00 (19811): Guest Log: BIOS: Booting from Hard Disk...
2024-06-21 02:58:04 (19811): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-21 02:58:04 (19811): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-21 02:58:05 (19811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-21 02:58:19 (19811): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-21 02:58:19 (19811): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-21 02:58:39 (19811): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-21 02:58:39 (19811): Guest Log: 00:00:00.000262 main     Log opened 2024-06-21T00:58:38.789121000Z
2024-06-21 02:58:39 (19811): Guest Log: 00:00:00.000473 main     OS Product: Linux
2024-06-21 02:58:39 (19811): Guest Log: 00:00:00.000554 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-21 02:58:39 (19811): Guest Log: 00:00:00.000606 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-21 02:58:39 (19811): Guest Log: 00:00:00.000655 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-21 02:58:39 (19811): Guest Log: 00:00:00.000657 main     Process ID: 1335
2024-06-21 02:58:39 (19811): Guest Log: 00:00:00.000658 main     Package type: LINUX_64BITS_GENERIC
2024-06-21 02:58:39 (19811): Guest Log: 00:00:00.003596 main     5.2.32 r132073 started. Verbose level = 0
2024-06-21 02:58:40 (19811): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-21 02:58:40 (19811): Guest Log: [INFO] Mounting shared directory
2024-06-21 02:58:40 (19811): Guest Log: [INFO] Checking for init_data.xml
2024-06-21 02:58:44 (19811): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-21 02:58:44 (19811): Guest Log: [INFO] Detected branch: prod
2024-06-21 02:58:45 (19811): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-21 02:58:45 (19811): Guest Log: Copying input files
2024-06-21 02:58:54 (19811): Guest Log: Copied input files into RunAtlas.
2024-06-21 02:58:54 (19811): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-21 02:58:54 (19811): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-21 02:58:54 (19811): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-21 02:58:54 (19811): Guest Log: Further information can be found at the LHC@home message board.
2024-06-21 02:59:04 (19811): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-21 02:59:04 (19811): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-21 02:59:04 (19811): Guest Log: 2.6.3.0 1612 0 32232 134107 3 1 3117205 4096000 0 65024 0 0 n/a 1 23 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-21 02:59:08 (19811): Guest Log: copied the webapp to /var/www
2024-06-21 02:59:08 (19811): Guest Log: ATHENA_PROC_NUMBER=6
2024-06-21 02:59:08 (19811): Guest Log: ATHENA_CORE_NUMBER=6
2024-06-21 02:59:09 (19811): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-21 02:59:09 (19811): Guest Log:  *** Starting ATLAS job. (PandaID=6238061384 taskID=38921013) ***
2024-06-21 04:36:59 (19811): Status Report: Elapsed Time: '6000.000000'
2024-06-21 04:36:59 (19811): Status Report: CPU Time: '15499.930000'
2024-06-21 06:15:59 (19811): Status Report: Elapsed Time: '12000.000000'
2024-06-21 06:15:59 (19811): Status Report: CPU Time: '35326.370000'
2024-06-21 07:55:00 (19811): Status Report: Elapsed Time: '18000.000000'
2024-06-21 07:55:00 (19811): Status Report: CPU Time: '55071.360000'
2024-06-21 09:34:00 (19811): Status Report: Elapsed Time: '24000.000000'
2024-06-21 09:34:00 (19811): Status Report: CPU Time: '74901.070000'
2024-06-21 11:13:00 (19811): Status Report: Elapsed Time: '30000.000000'
2024-06-21 11:13:00 (19811): Status Report: CPU Time: '94720.880000'
2024-06-21 12:52:01 (19811): Status Report: Elapsed Time: '36000.000000'
2024-06-21 12:52:01 (19811): Status Report: CPU Time: '114432.960000'
2024-06-21 14:31:01 (19811): Status Report: Elapsed Time: '42000.000000'
2024-06-21 14:31:01 (19811): Status Report: CPU Time: '134248.440000'
2024-06-21 16:04:02 (19811): Guest Log:  *** Job finished ***
2024-06-21 16:04:02 (19811): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:46,198 | INFO     | [data] queue_monitor thread has finished
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:52,601 | INFO     | job.realtimelogging is not enabled
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:53,743 | INFO     | [payload] run_realtimelog thread has finished
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:54,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198528083776)>', '<ExcThread(monitor, started 140197572364032)>']
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:54,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:54,322 | INFO     | [monitor] control thread has ended
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,095 | INFO     | all workflow threads have been joined
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,095 | INFO     | end of generic workflow (traces error code: 0)
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,096 | INFO     | traces error code: 0
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,375 [wrapper] ==== pilot stdout END ====
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,395 [wrapper] ==== wrapper stdout RESUME ====
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,413 [wrapper] pilotpid: 6508
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,425 [wrapper] Pilot exit status: 0
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,681 [wrapper] pandaids: 6238061384
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,797 [wrapper] cleanup supervisor_pilot 24000 6509
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,802 [wrapper] Test setup, not cleaning
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,807 [wrapper] ==== wrapper stdout END ====
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,811 [wrapper] ==== wrapper stderr END ====
2024-06-21 16:04:02 (19811): Guest Log: 2024-06-21 14:03:59,820 [wrapper] apfmon messages muted
2024-06-21 16:04:02 (19811): Guest Log:  *** Error codes and diagnostics ***
2024-06-21 16:04:02 (19811): Guest Log:     "exeErrorCode": 0,
2024-06-21 16:04:02 (19811): Guest Log:     "exeErrorDiag": "",
2024-06-21 16:04:02 (19811): Guest Log:     "pilotErrorCode": 0,
2024-06-21 16:04:02 (19811): Guest Log:     "pilotErrorDiag": "",
2024-06-21 16:04:02 (19811): Guest Log:  *** Listing of results directory ***
2024-06-21 16:04:02 (19811): Guest Log: total 348092
2024-06-21 16:04:02 (19811): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 19 14:55 pilot3.tar.gz
2024-06-21 16:04:02 (19811): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 19 15:02 runpilot2-wrapper.sh
2024-06-21 16:04:02 (19811): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 19 15:02 queuedata.json
2024-06-21 16:04:02 (19811): Guest Log: -rw-r--r--. 1 atlas atlas      6649 Jun 21 00:58 init_data.xml
2024-06-21 16:04:02 (19811): Guest Log: -rw-r--r--. 1 atlas atlas    482527 Jun 21 00:58 input.tar.gz
2024-06-21 16:04:02 (19811): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 21 00:58 start_atlas.sh
2024-06-21 16:04:02 (19811): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 21 00:58 EVNT.38776210._000566.pool.root.1 -> /data/./ATLAS.root_0
2024-06-21 16:04:02 (19811): Guest Log: -rw-r--r--. 1 atlas atlas      2643 Jun 21 00:59 pandaJob.out
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas       424 Jun 21 00:59 setup.sh.local
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas   1024134 Jun 21 00:59 agis_schedconf.cvmfs.json
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas   1321251 Jun 21 00:59 cric_ddmendpoints.json
2024-06-21 16:04:02 (19811): Guest Log: drwx------. 4 atlas atlas      4096 Jun 21 00:59 pilot3
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas 344783996 Jun 21 14:02 HITS.38921013._048817.pool.root.1
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas        95 Jun 21 14:02 pilot_heartbeat.json
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas      1043 Jun 21 14:03 memory_monitor_summary.json
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas         0 Jun 21 14:03 agis_ddmendpoints.agis.ALL.json
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas    563127 Jun 21 14:03 log.38921013._048817.job.log.tgz.1
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas      7741 Jun 21 14:03 heartbeat.json
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 21 14:03 pilotlog.txt
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas   3535863 Jun 21 14:03 log.38921013._048817.job.log.1
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas       357 Jun 21 14:03 output.list
2024-06-21 16:04:02 (19811): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 21 14:03 runtime_log
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas   4116480 Jun 21 14:03 result.tar.gz
2024-06-21 16:04:02 (19811): Guest Log: -rw-r--r--. 1 atlas atlas     11021 Jun 21 14:03 runtime_log.err
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas       678 Jun 21 14:03 NKAMDmR0Be5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmooWKDmByqrVm.diag
2024-06-21 16:04:02 (19811): Guest Log: Looking for outputfile HITS.38921013._048817.pool.root.1
2024-06-21 16:04:02 (19811): Guest Log: HITS file was successfully produced
2024-06-21 16:04:02 (19811): Guest Log: -rw-------. 1 atlas atlas 344783996 Jun 21 14:02 /home/atlas/RunAtlas/HITS.38921013._048817.pool.root.1
2024-06-21 16:04:03 (19811): Guest Log: Successfully finished the ATLAS job!
2024-06-21 16:04:03 (19811): Guest Log: Copying the results back to the shared directory!
2024-06-21 16:04:03 (19811): Guest Log:  *** Contents of shared directory: ***
2024-06-21 16:04:03 (19811): Guest Log: total 532720
2024-06-21 16:04:03 (19811): Guest Log: -rw-r--r--. 1 root root 540869605 Jun 21 00:57 ATLAS.root_0
2024-06-21 16:04:03 (19811): Guest Log: -rw-r--r--. 1 root root      6649 Jun 21 00:57 init_data.xml
2024-06-21 16:04:03 (19811): Guest Log: -rw-r--r--. 1 root root    482527 Jun 21 00:57 input.tar.gz
2024-06-21 16:04:03 (19811): Guest Log: -rw-r--r--. 1 root root   4116480 Jun 21 14:04 result.tar.gz
2024-06-21 16:04:03 (19811): Guest Log: -rw-r--r--. 1 root root     17537 Jun 21 00:57 start_atlas.sh
2024-06-21 16:04:03 (19811): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-21 16:04:03 (19811): VM Completion File Detected.
2024-06-21 16:04:03 (19811): Powering off VM.
2024-06-21 16:04:03 (19811): Successfully stopped VM.
2024-06-21 16:04:03 (19811): Deregistering VM. (boinc_f1207f533914567b, slot#0)
2024-06-21 16:04:03 (19811): Removing network bandwidth throttle group from VM.
2024-06-21 16:04:03 (19811): Removing VM from VirtualBox.
16:04:09 (19811): called boinc_finish(0)

</stderr_txt>
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