Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-19 10:44:53 (30112): Detected: vboxwrapper 26206
2024-06-19 10:44:53 (30112): Detected: BOINC client v7.24.1
2024-06-19 10:44:54 (30112): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-19 10:44:54 (30112): Successfully copied 'init_data.xml' to the shared directory.
2024-06-19 10:44:54 (30112): Create VM. (boinc_8a13c3a1ffc24d6e, slot#0)
2024-06-19 10:44:54 (30112): Setting Memory Size for VM. (4000MB)
2024-06-19 10:44:54 (30112): Setting CPU Count for VM. (2)
2024-06-19 10:44:54 (30112): Setting Chipset Options for VM.
2024-06-19 10:44:54 (30112): Setting Graphics Controller Options for VM.
2024-06-19 10:44:54 (30112): Setting Boot Options for VM.
2024-06-19 10:44:54 (30112): Setting Network Configuration for NAT.
2024-06-19 10:44:54 (30112): Enabling VM Network Access.
2024-06-19 10:44:54 (30112): Disabling USB Support for VM.
2024-06-19 10:44:54 (30112): Disabling COM Port Support for VM.
2024-06-19 10:44:54 (30112): Disabling LPT Port Support for VM.
2024-06-19 10:44:54 (30112): Disabling Audio Support for VM.
2024-06-19 10:44:54 (30112): Disabling Clipboard Support for VM.
2024-06-19 10:44:54 (30112): Disabling Drag and Drop Support for VM.
2024-06-19 10:44:54 (30112): Adding storage controller(s) to VM.
2024-06-19 10:44:54 (30112): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-19 10:44:54 (30112): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-19 10:44:54 (30112): forwarding host port 47361 to guest port 80
2024-06-19 10:44:54 (30112): Enabling remote desktop for VM.
2024-06-19 10:44:54 (30112): Enabling shared directory for VM.
2024-06-19 10:44:55 (30112): Starting VM using VBoxManage interface. (boinc_8a13c3a1ffc24d6e, slot#0)
2024-06-19 10:44:56 (30112): Successfully started VM. (PID = '30326')
2024-06-19 10:44:56 (30112): Reporting VM Process ID to BOINC.
2024-06-19 10:44:56 (30112): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-19 10:44:56 (30112): Guest Log: CPUID EDX: 0x178bfbff
2024-06-19 10:44:56 (30112): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-19 10:44:56 (30112): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-19 10:44:56 (30112): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-19 10:44:56 (30112): Detected: Web Application Enabled (http://localhost:47361)
2024-06-19 10:44:56 (30112): Detected: Remote Desktop Enabled (localhost:49015)
2024-06-19 10:44:56 (30112): Preference change detected
2024-06-19 10:44:56 (30112): Setting CPU throttle for VM. (100%)
2024-06-19 10:44:56 (30112): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-19 10:44:58 (30112): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-19 10:44:58 (30112): Guest Log: BIOS: Booting from Hard Disk...
2024-06-19 10:45:01 (30112): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-19 10:45:01 (30112): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-19 10:45:01 (30112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-19 10:45:07 (30112): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-19 10:45:07 (30112): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-19 10:45:12 (30112): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-19 10:45:12 (30112): Guest Log: 00:00:00.000141 main     Log opened 2024-06-19T16:45:10.498517000Z
2024-06-19 10:45:12 (30112): Guest Log: 00:00:00.000215 main     OS Product: Linux
2024-06-19 10:45:12 (30112): Guest Log: 00:00:00.000234 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-19 10:45:12 (30112): Guest Log: 00:00:00.000272 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-19 10:45:12 (30112): Guest Log: 00:00:00.000286 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-19 10:45:12 (30112): Guest Log: 00:00:00.000291 main     Process ID: 1251
2024-06-19 10:45:12 (30112): Guest Log: 00:00:00.000292 main     Package type: LINUX_64BITS_GENERIC
2024-06-19 10:45:12 (30112): Guest Log: 00:00:00.000929 main     5.2.32 r132073 started. Verbose level = 0
2024-06-19 10:45:12 (30112): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-19 10:45:12 (30112): Guest Log: [INFO] Mounting shared directory
2024-06-19 10:45:12 (30112): Guest Log: [INFO] Checking for init_data.xml
2024-06-19 10:47:01 (30112): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-19 10:47:01 (30112): Guest Log: [INFO] Detected branch: prod
2024-06-19 10:47:01 (30112): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-19 10:47:01 (30112): Guest Log: Copying input files
2024-06-19 10:47:03 (30112): Guest Log: Copied input files into RunAtlas.
2024-06-19 10:47:03 (30112): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-19 10:47:03 (30112): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-19 10:47:03 (30112): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-19 10:47:03 (30112): Guest Log: Further information can be found at the LHC@home message board.
2024-06-19 10:47:58 (30112): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-19 10:47:58 (30112): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-19 10:47:58 (30112): Guest Log: 2.6.3.0 1547 1 30084 134061 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2024-06-19 10:47:59 (30112): Guest Log: copied the webapp to /var/www
2024-06-19 10:47:59 (30112): Guest Log: ATHENA_PROC_NUMBER=2
2024-06-19 10:47:59 (30112): Guest Log: ATHENA_CORE_NUMBER=2
2024-06-19 10:47:59 (30112): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-19 10:47:59 (30112): Guest Log:  *** Starting ATLAS job. (PandaID=6237819691 taskID=38921001) ***
2024-06-19 12:23:56 (30112): Status Report: Elapsed Time: '6000.000000'
2024-06-19 12:23:56 (30112): Status Report: CPU Time: '9641.180000'
2024-06-19 14:02:57 (30112): Status Report: Elapsed Time: '12000.000000'
2024-06-19 14:02:57 (30112): Status Report: CPU Time: '21515.090000'
2024-06-19 15:41:57 (30112): Status Report: Elapsed Time: '18000.000000'
2024-06-19 15:41:57 (30112): Status Report: CPU Time: '33387.940000'
2024-06-19 17:20:57 (30112): Status Report: Elapsed Time: '24000.000000'
2024-06-19 17:20:57 (30112): Status Report: CPU Time: '45259.910000'
2024-06-19 18:59:58 (30112): Status Report: Elapsed Time: '30000.000000'
2024-06-19 18:59:58 (30112): Status Report: CPU Time: '57133.350000'
2024-06-19 20:38:58 (30112): Status Report: Elapsed Time: '36000.000000'
2024-06-19 20:38:58 (30112): Status Report: CPU Time: '69006.920000'
2024-06-19 22:17:59 (30112): Status Report: Elapsed Time: '42000.000000'
2024-06-19 22:17:59 (30112): Status Report: CPU Time: '80882.430000'
2024-06-19 23:02:12 (30112): Guest Log:  *** Job finished ***
2024-06-19 23:02:12 (30112): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:44,626 | INFO     | [job] create_data_payload thread has finished
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:45,520 | INFO     | [job] queue monitor thread has finished
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:46,186 | INFO     | [data] queue_monitor thread has finished
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:48,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959246006080)>', '<ExcThread(monitor, started 139958807418624)>']
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:48,296 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:48,296 | INFO     | [monitor] control thread has ended
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,031 | INFO     | all workflow threads have been joined
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,032 | INFO     | end of generic workflow (traces error code: 0)
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,032 | INFO     | traces error code: 0
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,108 [wrapper] ==== pilot stdout END ====
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,111 [wrapper] ==== wrapper stdout RESUME ====
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,115 [wrapper] pilotpid: 6429
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,119 [wrapper] Pilot exit status: 0
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,384 [wrapper] pandaids: 6237819691
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,404 [wrapper] cleanup supervisor_pilot  2486 6430
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,407 [wrapper] Test setup, not cleaning
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,410 [wrapper] ==== wrapper stdout END ====
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,413 [wrapper] ==== wrapper stderr END ====
2024-06-19 23:02:12 (30112): Guest Log: 2024-06-20 05:01:53,420 [wrapper] apfmon messages muted
2024-06-19 23:02:12 (30112): Guest Log:  *** Error codes and diagnostics ***
2024-06-19 23:02:12 (30112): Guest Log:     "exeErrorCode": 0,
2024-06-19 23:02:12 (30112): Guest Log:     "exeErrorDiag": "",
2024-06-19 23:02:12 (30112): Guest Log:     "pilotErrorCode": 0,
2024-06-19 23:02:12 (30112): Guest Log:     "pilotErrorDiag": "",
2024-06-19 23:02:12 (30112): Guest Log:  *** Listing of results directory ***
2024-06-19 23:02:12 (30112): Guest Log: total 363660
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 19 09:55 pilot3.tar.gz
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 19 10:08 queuedata.json
2024-06-19 23:02:12 (30112): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 19 10:11 runpilot2-wrapper.sh
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 atlas atlas    482533 Jun 19 16:46 input.tar.gz
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 atlas atlas      6900 Jun 19 16:46 init_data.xml
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 19 16:46 start_atlas.sh
2024-06-19 23:02:12 (30112): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 19 16:47 EVNT.38776190._000767.pool.root.1 -> /data/./ATLAS.root_0
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 atlas atlas      2650 Jun 19 16:47 pandaJob.out
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas       424 Jun 19 16:48 setup.sh.local
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas   1021262 Jun 19 16:49 agis_schedconf.cvmfs.json
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas   1317733 Jun 19 16:49 cric_ddmendpoints.json
2024-06-19 23:02:12 (30112): Guest Log: drwx------. 4 atlas atlas      4096 Jun 19 16:49 pilot3
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas 357912366 Jun 20 05:00 HITS.38921001._062296.pool.root.1
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas        95 Jun 20 05:00 pilot_heartbeat.json
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas      1021 Jun 20 05:01 memory_monitor_summary.json
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas         0 Jun 20 05:01 agis_ddmendpoints.agis.ALL.json
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas    592556 Jun 20 05:01 log.38921001._062296.job.log.tgz.1
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas      7699 Jun 20 05:01 heartbeat.json
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas      4394 Jun 20 05:01 pilotlog.txt
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas   4916104 Jun 20 05:01 log.38921001._062296.job.log.1
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas       357 Jun 20 05:01 output.list
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 20 05:01 runtime_log
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas   5529600 Jun 20 05:01 result.tar.gz
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas       643 Jun 20 05:01 TKrNDmGT7d5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm80jKDm0S6i8n.diag
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 atlas atlas     10913 Jun 20 05:01 runtime_log.err
2024-06-19 23:02:12 (30112): Guest Log: Looking for outputfile HITS.38921001._062296.pool.root.1
2024-06-19 23:02:12 (30112): Guest Log: HITS file was successfully produced
2024-06-19 23:02:12 (30112): Guest Log: -rw-------. 1 atlas atlas 357912366 Jun 20 05:00 /home/atlas/RunAtlas/HITS.38921001._062296.pool.root.1
2024-06-19 23:02:12 (30112): Guest Log: Successfully finished the ATLAS job!
2024-06-19 23:02:12 (30112): Guest Log: Copying the results back to the shared directory!
2024-06-19 23:02:12 (30112): Guest Log:  *** Contents of shared directory: ***
2024-06-19 23:02:12 (30112): Guest Log: total 604624
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 root root 613087257 Jun 19 16:44 ATLAS.root_0
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 root root      6900 Jun 19 16:44 init_data.xml
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 root root    482533 Jun 19 16:44 input.tar.gz
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 root root   5529600 Jun 20  2024 result.tar.gz
2024-06-19 23:02:12 (30112): Guest Log: -rw-r--r--. 1 root root     17537 Jun 19 16:44 start_atlas.sh
2024-06-19 23:02:12 (30112): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-19 23:02:12 (30112): VM Completion File Detected.
2024-06-19 23:02:12 (30112): Powering off VM.
2024-06-19 23:02:13 (30112): Successfully stopped VM.
2024-06-19 23:02:13 (30112): Deregistering VM. (boinc_8a13c3a1ffc24d6e, slot#0)
2024-06-19 23:02:13 (30112): Removing network bandwidth throttle group from VM.
2024-06-19 23:02:13 (30112): Removing VM from VirtualBox.
23:02:18 (30112): called boinc_finish(0)

</stderr_txt>
]]>

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