Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:33:17 (37663): wrapper (7.7.26015): starting
07:33:17 (37663): wrapper: running run_atlas (--nthreads 8)
[2024-06-19 07:33:17] Arguments: --nthreads 8
[2024-06-19 07:33:17] Threads: 8
[2024-06-19 07:33:17] Checking for CVMFS
[2024-06-19 07:33:18] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-19 07:33:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-19 07:33:18] Running cvmfs_config stat atlas.cern.ch
[2024-06-19 07:33:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-19 07:33:19] 2.11.2.0 84859 10985 104988 134052 0 299 16406060 18432000 16932 130560 0 75317496 99.361 89846552 53060 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-19 07:33:19] CVMFS is ok
[2024-06-19 07:33:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-19 07:33:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-19 07:33:19] Further information can be found at the LHC@home message board.
[2024-06-19 07:33:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-19 07:33:19] Checking for apptainer binary...
[2024-06-19 07:33:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-19 07:33:19] Running /usr/bin/apptainer --version
[2024-06-19 07:33:19] apptainer version 1.3.1-1.el7
[2024-06-19 07:33:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-19 07:33:31] c-212-2.aglt2.org
[2024-06-19 07:33:31] apptainer works
[2024-06-19 07:33:31] Set ATHENA_PROC_NUMBER=8
[2024-06-19 07:33:31] Set ATHENA_CORE_NUMBER=8
[2024-06-19 07:33:31] Starting ATLAS job with PandaID=6237440038
[2024-06-19 07:33:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-19 20:33:25]  *** The last 200 lines of the pilot log: ***
[2024-06-19 20:33:25] 2024-06-20 00:32:54,164 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-19 20:33:25] 2024-06-20 00:32:54,164 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-19 20:33:25] 2024-06-20 00:32:54,225 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-19 20:33:25] 2024-06-20 00:32:56,668 | INFO     | monitor loop #3205: job 0:6237440038 is in state 'finished'
[2024-06-19 20:33:25] 2024-06-20 00:32:56,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-19 20:33:25] 2024-06-20 00:32:59,173 | INFO     | monitor loop #3206: job 0:6237440038 is in state 'finished'
[2024-06-19 20:33:25] 2024-06-20 00:32:59,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-19 20:33:25] 2024-06-20 00:33:01,679 | INFO     | monitor loop #3207: job 0:6237440038 is in state 'finished'
[2024-06-19 20:33:25] 2024-06-20 00:33:01,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-19 20:33:25] 2024-06-20 00:33:04,185 | INFO     | monitor loop #3208: job 0:6237440038 is in state 'finished'
[2024-06-19 20:33:25] 2024-06-20 00:33:04,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-19 20:33:25] 2024-06-20 00:33:06,689 | INFO     | monitor loop #3209: job 0:6237440038 is in state 'finished'
[2024-06-19 20:33:25] 2024-06-20 00:33:06,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-19 20:33:25] 2024-06-20 00:33:08,270 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-19 20:33:25] 2024-06-20 00:33:08,270 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6237440038/memory_monitor_summary.json (trf name=prmon)
[2024-06-19 20:33:25] 2024-06-20 00:33:08,271 | INFO     | extracted standard info from prmon json
[2024-06-19 20:33:25] 2024-06-20 00:33:08,271 | INFO     | extracted standard memory fields from prmon json
[2024-06-19 20:33:25] 2024-06-20 00:33:08,271 | WARNING  | GPU info not found in prmon json
[2024-06-19 20:33:25] 2024-06-20 00:33:08,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-19 20:33:25] 2024-06-20 00:33:08,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-19 20:33:25] 2024-06-20 00:33:08,290 | INFO     | fitting pss+swap vs Time
[2024-06-19 20:33:25] 2024-06-20 00:33:08,291 | INFO     | model: linear, x: [1718797165.0, 1718797226.0, 1718797287.0, 1718797348.0, 1718797409.0, 1718797470.0, 1718797531.0, 1718797592.0, 1718797653.0, 1718797714.0, 1718
[2024-06-19 20:33:25] 2024-06-20 00:33:08,291 | INFO     | sum of square deviations: 136656654636.79097
[2024-06-19 20:33:25] 2024-06-20 00:33:08,302 | INFO     | sum of deviations: 1629072726992.7515
[2024-06-19 20:33:25] 2024-06-20 00:33:08,302 | INFO     | mean x: 1718820345.0538764
[2024-06-19 20:33:25] 2024-06-20 00:33:08,302 | INFO     | mean y: 2446884.7621550593
[2024-06-19 20:33:25] 2024-06-20 00:33:08,302 | INFO     | -- intersect: -20487468913.11584
[2024-06-19 20:33:25] 2024-06-20 00:33:08,302 | INFO     | intersect: -20487468913.11584
[2024-06-19 20:33:25] 2024-06-20 00:33:08,303 | INFO     | chi2: 17.785041719278556
[2024-06-19 20:33:25] 2024-06-20 00:33:08,304 | INFO     | model: linear, x: [1718797165.0, 1718797226.0, 1718797287.0, 1718797348.0, 1718797409.0, 1718797470.0, 1718797531.0, 1718797592.0, 1718797653.0, 1718797714.0, 1718
[2024-06-19 20:33:25] 2024-06-20 00:33:08,304 | INFO     | sum of square deviations: 133980691386.77644
[2024-06-19 20:33:25] 2024-06-20 00:33:08,321 | INFO     | sum of deviations: 1671929417672.7048
[2024-06-19 20:33:25] 2024-06-20 00:33:08,321 | INFO     | mean x: 1718820192.5542328
[2024-06-19 20:33:25] 2024-06-20 00:33:08,322 | INFO     | mean y: 2449310.373015873
[2024-06-19 20:33:25] 2024-06-20 00:33:08,322 | INFO     | -- intersect: -21446507355.519485
[2024-06-19 20:33:25] 2024-06-20 00:33:08,322 | INFO     | intersect: -21446507355.519485
[2024-06-19 20:33:25] 2024-06-20 00:33:08,322 | INFO     | chi2: 16.93310574947447
[2024-06-19 20:33:25] 2024-06-20 00:33:08,323 | INFO     | current chi2=16.93310574947447 (change=4.790182577309375 %)
[2024-06-19 20:33:25] 2024-06-20 00:33:08,323 | INFO     | right removable region: 755
[2024-06-19 20:33:25] 2024-06-20 00:33:08,323 | INFO     | model: linear, x: [1718797470.0, 1718797531.0, 1718797592.0, 1718797653.0, 1718797714.0, 1718797775.0, 1718797836.0, 1718797897.0, 1718797958.0, 1718798019.0, 1718
[2024-06-19 20:33:25] 2024-06-20 00:33:08,324 | INFO     | sum of square deviations: 133980666376.77644
[2024-06-19 20:33:25] 2024-06-20 00:33:08,334 | INFO     | sum of deviations: 1385035871126.4565
[2024-06-19 20:33:25] 2024-06-20 00:33:08,334 | INFO     | mean x: 1718820497.5542328
[2024-06-19 20:33:25] 2024-06-20 00:33:08,334 | INFO     | mean y: 2460788.342592593
[2024-06-19 20:33:25] 2024-06-20 00:33:08,334 | INFO     | -- intersect: -17765983790.409576
[2024-06-19 20:33:25] 2024-06-20 00:33:08,334 | INFO     | intersect: -17765983790.409576
[2024-06-19 20:33:25] 2024-06-20 00:33:08,335 | INFO     | chi2: 13.74494941861256
[2024-06-19 20:33:25] 2024-06-20 00:33:08,335 | INFO     | current chi2=13.74494941861256 (change=22.71623741138956 %)
[2024-06-19 20:33:25] 2024-06-20 00:33:08,335 | INFO     | left removable region: 10
[2024-06-19 20:33:25] 2024-06-20 00:33:08,336 | INFO     | model: linear, x: [1718797775.0, 1718797836.0, 1718797897.0, 1718797958.0, 1718798019.0, 1718798080.0, 1718798141.0, 1718798202.0, 1718798263.0, 1718798324.0, 1718
[2024-06-19 20:33:25] 2024-06-20 00:33:08,336 | INFO     | sum of square deviations: 128216970112.74362
[2024-06-19 20:33:25] 2024-06-20 00:33:08,346 | INFO     | sum of deviations: 1253075486327.9673
[2024-06-19 20:33:25] 2024-06-20 00:33:08,347 | INFO     | mean x: 1718820467.0550334
[2024-06-19 20:33:25] 2024-06-20 00:33:08,347 | INFO     | mean y: 2473390.3422818794
[2024-06-19 20:33:25] 2024-06-20 00:33:08,347 | INFO     | -- intersect: -16795706996.946253
[2024-06-19 20:33:25] 2024-06-20 00:33:08,347 | INFO     | intersect: -16795706996.946253
[2024-06-19 20:33:25] 2024-06-20 00:33:08,347 | INFO     | chi2: 10.931757406191682
[2024-06-19 20:33:25] 2024-06-20 00:33:08,348 | INFO     | -- intersect: -16795706996.946253
[2024-06-19 20:33:25] 2024-06-20 00:33:08,348 | INFO     | current memory leak: 9.77 B/s (using 745 data points, chi2=10.93)
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | ..............................
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | . Timing measurements:
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | . get job = 0 s
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | . initial setup = 4 s
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | . payload setup = 72 s
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | . stage-in = 0 s
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | . payload execution = 46467 s
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | . stage-out = 2 s
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | . log creation = 0 s
[2024-06-19 20:33:25] 2024-06-20 00:33:08,349 | INFO     | ..............................
[2024-06-19 20:33:25] 2024-06-20 00:33:08,799 | INFO     | 
[2024-06-19 20:33:25] 2024-06-20 00:33:08,799 | INFO     | job summary report
[2024-06-19 20:33:25] 2024-06-20 00:33:08,799 | INFO     | --------------------------------------------------
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | PanDA job id: 6237440038
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | task id: 38921007
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | errors: (none)
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | pilot state: finished 
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | transexitcode: 0
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | exeerrorcode: 0
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | exeerrordiag: 
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | exitcode: 0
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | exitmsg: OK
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | cpuconsumptiontime: 127569 s
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | nevents: 400
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | neventsw: 0
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | pid: 27814
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | pgrp: 27814
[2024-06-19 20:33:25] 2024-06-20 00:33:08,800 | INFO     | corecount: 8
[2024-06-19 20:33:25] 2024-06-20 00:33:08,801 | INFO     | event service: False
[2024-06-19 20:33:25] 2024-06-20 00:33:08,801 | INFO     | sizes: {0: 2381173, 11: 2381173, 21: 2381201, 32: 2381229, 43: 2381491, 53: 2381491, 46544: 2426416, 46546: 2435376, 46548: 2435432, 46562: 2435602}
[2024-06-19 20:33:25] 2024-06-20 00:33:08,801 | INFO     | --------------------------------------------------
[2024-06-19 20:33:25] 2024-06-20 00:33:08,801 | INFO     | 
[2024-06-19 20:33:25] 2024-06-20 00:33:08,801 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-19 20:33:25] 2024-06-20 00:33:08,820 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,821 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-19 20:33:25] 2024-06-20 00:33:08,822 | INFO     | job 6237440038 has completed (purged errors)
[2024-06-19 20:33:25] 2024-06-20 00:33:08,822 | INFO     | overall cleanup function is called
[2024-06-19 20:33:25] 2024-06-20 00:33:09,829 | INFO     | --- collectZombieJob: --- 10, [27814]
[2024-06-19 20:33:25] 2024-06-20 00:33:09,829 | INFO     | zombie collector waiting for pid 27814
[2024-06-19 20:33:25] 2024-06-20 00:33:09,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-19 20:33:25] 2024-06-20 00:33:10,835 | INFO     | collected zombie processes
[2024-06-19 20:33:25] 2024-06-20 00:33:10,835 | INFO     | will now attempt to kill all subprocesses of pid=27814
[2024-06-19 20:33:25] 2024-06-20 00:33:11,100 | INFO     | process IDs to be killed: [27814] (in reverse order)
[2024-06-19 20:33:25] 2024-06-20 00:33:11,273 | WARNING  | found no corresponding commands to process id(s)
[2024-06-19 20:33:25] 2024-06-20 00:33:11,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-19 20:33:25] 2024-06-20 00:33:11,284 | INFO     | did not find any defunct processes belonging to 27814
[2024-06-19 20:33:25] 2024-06-20 00:33:11,292 | INFO     | did not find any defunct processes belonging to 27814
[2024-06-19 20:33:25] 2024-06-20 00:33:11,293 | INFO     | ready for new job
[2024-06-19 20:33:25] 2024-06-20 00:33:11,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-19 20:33:25] 2024-06-20 00:33:11,295 | INFO     | *************************************
[2024-06-19 20:33:25] 2024-06-20 00:33:11,295 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-19 20:33:25] 2024-06-20 00:33:11,295 | INFO     | *************************************
[2024-06-19 20:33:25] 2024-06-20 00:33:11,295 | INFO     | 
[2024-06-19 20:33:25] 2024-06-20 00:33:11,300 | INFO     | architecture information:
[2024-06-19 20:33:25] 2024-06-20 00:33:11,301 | INFO     | executing command: cat /etc/os-release
[2024-06-19 20:33:25] 2024-06-20 00:33:11,337 | INFO     | cat /etc/os-release:
[2024-06-19 20:33:25] NAME="CentOS Linux"
[2024-06-19 20:33:25] VERSION="7 (Core)"
[2024-06-19 20:33:25] ID="centos"
[2024-06-19 20:33:25] ID_LIKE="rhel fedora"
[2024-06-19 20:33:25] VERSION_ID="7"
[2024-06-19 20:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-19 20:33:25] ANSI_COLOR="0;31"
[2024-06-19 20:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-19 20:33:25] HOME_URL="https://www.centos.org/"
[2024-06-19 20:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-19 20:33:25] 
[2024-06-19 20:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-19 20:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-19 20:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-19 20:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-19 20:33:25] 
[2024-06-19 20:33:25] 2024-06-20 00:33:11,338 | INFO     | *************************************
[2024-06-19 20:33:25] 2024-06-20 00:33:11,840 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-19 20:33:25] 2024-06-20 00:33:11,874 | INFO     | sufficient remaining disk space (99015983104 B)
[2024-06-19 20:33:25] 2024-06-20 00:33:11,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-19 20:33:25] 2024-06-20 00:33:11,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-19 20:33:25] 2024-06-20 00:33:11,876 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-19 20:33:25] 2024-06-20 00:33:11,877 | INFO     | found 0 job(s) in 20 queues
[2024-06-19 20:33:25] 2024-06-20 00:33:11,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-19 20:33:25] 2024-06-20 00:33:11,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-19 20:33:25] 2024-06-20 00:33:12,083 | INFO     | all payload control threads have been joined
[2024-06-19 20:33:25] 2024-06-20 00:33:12,117 | INFO     | all job control threads have been joined
[2024-06-19 20:33:25] 2024-06-20 00:33:12,269 | INFO     | all data control threads have been joined
[2024-06-19 20:33:25] 2024-06-20 00:33:12,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-19 20:33:25] 2024-06-20 00:33:12,709 | INFO     | aborting loop
[2024-06-19 20:33:25] 2024-06-20 00:33:12,881 | INFO     | [job] retrieve thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:12,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-19 20:33:25] 2024-06-20 00:33:13,089 | INFO     | [payload] control thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:13,123 | INFO     | [job] control thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:13,173 | INFO     | [job] validate thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:13,275 | INFO     | [data] control thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:13,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-19 20:33:25] 2024-06-20 00:33:13,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-19 20:33:25] 2024-06-20 00:33:13,714 | INFO     | [job] job monitor thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:13,735 | INFO     | [payload] validate_post thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:13,745 | INFO     | [payload] execute_payloads thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:13,811 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:13,980 | INFO     | [payload] validate_pre thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:14,105 | INFO     | [job] create_data_payload thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:14,276 | INFO     | [payload] failed_post thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:14,326 | INFO     | [data] copytool_in thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:14,438 | INFO     | [job] queue monitor thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:14,935 | INFO     | [data] copytool_out thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:17,634 | INFO     | [data] queue_monitor thread has finished
[2024-06-19 20:33:25] 2024-06-20 00:33:18,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143988373312)>', '<ExcThread(monitor, started 140143541335808)>']
[2024-06-19 20:33:25] 2024-06-20 00:33:19,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-19 20:33:25] 2024-06-20 00:33:19,917 | INFO     | [monitor] control thread has ended
[2024-06-19 20:33:25] 2024-06-20 00:33:23,952 | INFO     | all workflow threads have been joined
[2024-06-19 20:33:25] 2024-06-20 00:33:23,952 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-19 20:33:25] 2024-06-20 00:33:23,953 | INFO     | traces error code: 0
[2024-06-19 20:33:25] 2024-06-20 00:33:23,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-19 20:33:25] 2024-06-20 00:33:24,201 [wrapper] ==== pilot stdout END ====
[2024-06-19 20:33:25] 2024-06-20 00:33:24,242 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-19 20:33:25] 2024-06-20 00:33:24,244 [wrapper] pilotpid: 64669
[2024-06-19 20:33:25] 2024-06-20 00:33:24,246 [wrapper] Pilot exit status: 0
[2024-06-19 20:33:25] 2024-06-20 00:33:24,259 [wrapper] pandaids: 6237440038
[2024-06-19 20:33:25] 2024-06-20 00:33:24,345 [wrapper] cleanup supervisor_pilot 85917 64670
[2024-06-19 20:33:25] 2024-06-20 00:33:24,356 [wrapper] Test setup, not cleaning
[2024-06-19 20:33:25] 2024-06-20 00:33:24,365 [wrapper] ==== wrapper stdout END ====
[2024-06-19 20:33:25] 2024-06-20 00:33:24,372 [wrapper] ==== wrapper stderr END ====
[2024-06-19 20:33:25] 2024-06-20 00:33:24,383 [wrapper] apfmon messages muted
[2024-06-19 20:33:25]  *** Error codes and diagnostics ***
[2024-06-19 20:33:25]     "exeErrorCode": 0,
[2024-06-19 20:33:25]     "exeErrorDiag": "",
[2024-06-19 20:33:25]     "pilotErrorCode": 0,
[2024-06-19 20:33:25]     "pilotErrorDiag": "",
[2024-06-19 20:33:25]  *** Listing of results directory ***
[2024-06-19 20:33:25] total 926216
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas    469766 Jun 19 00:14 pilot3.tar.gz
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas      5654 Jun 19 00:40 queuedata.json
[2024-06-19 20:33:25] -rwx------ 1 boincer umatlas     32308 Jun 19 00:41 runpilot2-wrapper.sh
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas       100 Jun 19 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-19 20:33:25] -rwxr-xr-x 1 boincer umatlas      7986 Jun 19 07:33 run_atlas
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas       105 Jun 19 07:33 job.xml
[2024-06-19 20:33:25] -rw-r--r-- 2 boincer umatlas 584363624 Jun 19 07:33 EVNT.38776201._000286.pool.root.1
[2024-06-19 20:33:25] -rw-r--r-- 2 boincer umatlas     17537 Jun 19 07:33 start_atlas.sh
[2024-06-19 20:33:25] drwxrwx--x 2 boincer umatlas      4096 Jun 19 07:33 shared
[2024-06-19 20:33:25] -rw-r--r-- 2 boincer umatlas    482535 Jun 19 07:33 input.tar.gz
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas         0 Jun 19 07:33 boinc_lockfile
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas      2625 Jun 19 07:33 pandaJob.out
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas       467 Jun 19 07:33 setup.sh.local
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas   1012157 Jun 19 07:35 agis_schedconf.cvmfs.json
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas   1317838 Jun 19 07:35 cric_ddmendpoints.json
[2024-06-19 20:33:25] drwx------ 4 boincer umatlas      4096 Jun 19 07:35 pilot3
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas      6387 Jun 19 20:27 init_data.xml
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas 349711350 Jun 19 20:32 HITS.38921007._048727.pool.root.1
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas       533 Jun 19 20:32 boinc_task_state.xml
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas      1098 Jun 19 20:32 memory_monitor_summary.json
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas         0 Jun 19 20:32 agis_ddmendpoints.agis.ALL.json
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas    756841 Jun 19 20:32 log.38921007._048727.job.log.tgz.1
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas      7758 Jun 19 20:33 heartbeat.json
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas        95 Jun 19 20:33 pilot_heartbeat.json
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas        29 Jun 19 20:33 wrapper_checkpoint.txt
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas      4334 Jun 19 20:33 pilotlog.txt
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas   4669159 Jun 19 20:33 log.38921007._048727.job.log.1
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas       357 Jun 19 20:33 output.list
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas       620 Jun 19 20:33 runtime_log
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas   5447680 Jun 19 20:33 result.tar.gz
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas       653 Jun 19 20:33 WGyKDmSJ2d5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm0mjKDmtam4Qn.diag
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas     11400 Jun 19 20:33 runtime_log.err
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas      8192 Jun 19 20:33 boinc_mmap_file
[2024-06-19 20:33:25] -rw-r--r-- 1 boincer umatlas     21986 Jun 19 20:33 stderr.txt
[2024-06-19 20:33:25] HITS file was successfully produced:
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas 349711350 Jun 19 20:32 shared/HITS.pool.root.1
[2024-06-19 20:33:25]  *** Contents of shared directory: ***
[2024-06-19 20:33:25] total 918004
[2024-06-19 20:33:25] -rw-r--r-- 2 boincer umatlas 584363624 Jun 19 07:33 ATLAS.root_0
[2024-06-19 20:33:25] -rw-r--r-- 2 boincer umatlas     17537 Jun 19 07:33 start_atlas.sh
[2024-06-19 20:33:25] -rw-r--r-- 2 boincer umatlas    482535 Jun 19 07:33 input.tar.gz
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas 349711350 Jun 19 20:32 HITS.pool.root.1
[2024-06-19 20:33:25] -rw------- 1 boincer umatlas   5447680 Jun 19 20:33 result.tar.gz
20:33:26 (37663): run_atlas exited; CPU time 124440.262011
20:33:26 (37663): called boinc_finish(0)

</stderr_txt>
]]>

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