Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
22:49:58 (118517): wrapper (7.7.26015): starting
22:49:58 (118517): wrapper: running run_atlas (--nthreads 12)
[2024-06-19 22:49:58] Arguments: --nthreads 12
[2024-06-19 22:49:58] Threads: 12
[2024-06-19 22:49:58] Checking for CVMFS
[2024-06-19 22:49:59] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-19 22:50:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-19 22:50:01] Running cvmfs_config stat atlas.cern.ch
[2024-06-19 22:50:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-19 22:50:02] 2.10.1.0 196204 232040 155476 134079 2 59 43067332 45568001 9599 130560 0 727899536 99.762 477705982 3019 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-19 22:50:02] CVMFS is ok
[2024-06-19 22:50:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-19 22:50:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-19 22:50:02] Further information can be found at the LHC@home message board.
[2024-06-19 22:50:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-19 22:50:02] Checking for apptainer binary...
[2024-06-19 22:50:02] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-19 22:50:02] Running /usr/bin/apptainer --version
[2024-06-19 22:50:05] apptainer version 1.3.2-1.el7
[2024-06-19 22:50:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-19 22:50:11] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0032.triumf.lcg
[2024-06-19 22:50:11] apptainer works
[2024-06-19 22:50:11] Set ATHENA_PROC_NUMBER=12
[2024-06-19 22:50:11] Set ATHENA_CORE_NUMBER=12
[2024-06-19 22:50:11] Starting ATLAS job with PandaID=6236926303
[2024-06-19 22:50:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 05:30:54]  *** The last 200 lines of the pilot log: ***
[2024-06-20 05:30:54] 2024-06-20 12:30:34,555 | INFO     | chi2: 6.601666061914499
[2024-06-20 05:30:54] 2024-06-20 12:30:34,555 | INFO     | current chi2=6.601666061914499 (change=10.467516786699422 %)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,555 | INFO     | right removable region: 385
[2024-06-20 05:30:54] 2024-06-20 12:30:34,556 | INFO     | model: linear, x: [1718863099.0, 1718863159.0, 1718863220.0, 1718863281.0, 1718863343.0, 1718863403.0, 1718863467.0, 1718863526.0, 1718863586.0, 1718863647.0, 1718
[2024-06-20 05:30:54] 2024-06-20 12:30:34,556 | INFO     | sum of square deviations: 17834267750.031128
[2024-06-20 05:30:54] 2024-06-20 12:30:34,558 | INFO     | sum of deviations: 246376961983.39377
[2024-06-20 05:30:54] 2024-06-20 12:30:34,558 | INFO     | mean x: 1718874841.8756478
[2024-06-20 05:30:54] 2024-06-20 12:30:34,558 | INFO     | mean y: 2704513.9248704663
[2024-06-20 05:30:54] 2024-06-20 12:30:34,558 | INFO     | -- intersect: -23743219204.7694
[2024-06-20 05:30:54] 2024-06-20 12:30:34,558 | INFO     | intersect: -23743219204.7694
[2024-06-20 05:30:54] 2024-06-20 12:30:34,558 | INFO     | chi2: 4.10265141650901
[2024-06-20 05:30:54] 2024-06-20 12:30:34,558 | INFO     | current chi2=4.10265141650901 (change=44.359413876185535 %)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,559 | INFO     | model: linear, x: [1718863403.0, 1718863467.0, 1718863526.0, 1718863586.0, 1718863647.0, 1718863708.0, 1718863769.0, 1718863831.0, 1718863891.0, 1718863952.0, 1718
[2024-06-20 05:30:54] 2024-06-20 12:30:34,559 | INFO     | sum of square deviations: 17150074938.509178
[2024-06-20 05:30:54] 2024-06-20 12:30:34,561 | INFO     | sum of deviations: 156284771384.5354
[2024-06-20 05:30:54] 2024-06-20 12:30:34,561 | INFO     | mean x: 1718874994.3884513
[2024-06-20 05:30:54] 2024-06-20 12:30:34,561 | INFO     | mean y: 2724590.2125984253
[2024-06-20 05:30:54] 2024-06-20 12:30:34,561 | INFO     | -- intersect: -15660996209.828726
[2024-06-20 05:30:54] 2024-06-20 12:30:34,561 | INFO     | intersect: -15660996209.828726
[2024-06-20 05:30:54] 2024-06-20 12:30:34,561 | INFO     | chi2: 2.519784158041989
[2024-06-20 05:30:54] 2024-06-20 12:30:34,561 | INFO     | current chi2=2.519784158041989 (change=38.58156830233215 %)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,562 | INFO     | model: linear, x: [1718863708.0, 1718863769.0, 1718863831.0, 1718863891.0, 1718863952.0, 1718864015.0, 1718864078.0, 1718864135.0, 1718864196.0, 1718864257.0, 1718
[2024-06-20 05:30:54] 2024-06-20 12:30:34,562 | INFO     | sum of square deviations: 16483650234.954823
[2024-06-20 05:30:54] 2024-06-20 12:30:34,564 | INFO     | sum of deviations: 71883523284.5559
[2024-06-20 05:30:54] 2024-06-20 12:30:34,564 | INFO     | mean x: 1718875146.8962767
[2024-06-20 05:30:54] 2024-06-20 12:30:34,564 | INFO     | mean y: 2743905.039893617
[2024-06-20 05:30:54] 2024-06-20 12:30:34,564 | INFO     | -- intersect: -7493095904.952386
[2024-06-20 05:30:54] 2024-06-20 12:30:34,564 | INFO     | intersect: -7493095904.952386
[2024-06-20 05:30:54] 2024-06-20 12:30:34,564 | INFO     | chi2: 1.135228841233001
[2024-06-20 05:30:54] 2024-06-20 12:30:34,564 | INFO     | current chi2=1.135228841233001 (change=54.94737763114058 %)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,565 | INFO     | model: linear, x: [1718864015.0, 1718864078.0, 1718864135.0, 1718864196.0, 1718864257.0, 1718864318.0, 1718864382.0, 1718864440.0, 1718864503.0, 1718864562.0, 1718
[2024-06-20 05:30:54] 2024-06-20 12:30:34,565 | INFO     | sum of square deviations: 15834645057.902937
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | sum of deviations: 34358341244.53372
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | mean x: 1718875299.4123988
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | mean y: 2752695.23180593
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | -- intersect: -3726898577.5345554
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | intersect: -3726898577.5345554
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | chi2: 0.8229026474730872
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | current chi2=0.8229026474730872 (change=27.512179255478426 %)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | model: linear, x: [1718864318.0, 1718864382.0, 1718864440.0, 1718864503.0, 1718864562.0, 1718864623.0, 1718864684.0, 1718864746.0, 1718864806.0, 1718864868.0, 1718
[2024-06-20 05:30:54] 2024-06-20 12:30:34,567 | INFO     | sum of square deviations: 15203010144.374252
[2024-06-20 05:30:54] 2024-06-20 12:30:34,569 | INFO     | sum of deviations: 27827497052.88251
[2024-06-20 05:30:54] 2024-06-20 12:30:34,569 | INFO     | mean x: 1718875451.9153006
[2024-06-20 05:30:54] 2024-06-20 12:30:34,569 | INFO     | mean y: 2754274.931693989
[2024-06-20 05:30:54] 2024-06-20 12:30:34,569 | INFO     | -- intersect: -3143464869.712168
[2024-06-20 05:30:54] 2024-06-20 12:30:34,570 | INFO     | intersect: -3143464869.712168
[2024-06-20 05:30:54] 2024-06-20 12:30:34,570 | INFO     | chi2: 0.8175905423470395
[2024-06-20 05:30:54] 2024-06-20 12:30:34,570 | INFO     | current chi2=0.8175905423470395 (change=0.6455326328527045 %)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,570 | INFO     | left removable region: 50
[2024-06-20 05:30:54] 2024-06-20 12:30:34,570 | INFO     | model: linear, x: [1718865845.0, 1718865904.0, 1718865965.0, 1718866027.0, 1718866087.0, 1718866149.0, 1718866214.0, 1718866270.0, 1718866331.0, 1718866393.0, 1718
[2024-06-20 05:30:54] 2024-06-20 12:30:34,570 | INFO     | sum of square deviations: 11657992911.653608
[2024-06-20 05:30:54] 2024-06-20 12:30:34,572 | INFO     | sum of deviations: 29543002283.549267
[2024-06-20 05:30:54] 2024-06-20 12:30:34,572 | INFO     | mean x: 1718876031.4208956
[2024-06-20 05:30:54] 2024-06-20 12:30:34,572 | INFO     | mean y: 2766997.4358208957
[2024-06-20 05:30:54] 2024-06-20 12:30:34,572 | INFO     | -- intersect: -4353107886.537043
[2024-06-20 05:30:54] 2024-06-20 12:30:34,572 | INFO     | intersect: -4353107886.537043
[2024-06-20 05:30:54] 2024-06-20 12:30:34,572 | INFO     | chi2: 0.001432252218747547
[2024-06-20 05:30:54] 2024-06-20 12:30:34,572 | INFO     | -- intersect: -4353107886.537043
[2024-06-20 05:30:54] 2024-06-20 12:30:34,572 | INFO     | current memory leak: 2.53 B/s (using 335 data points, chi2=0.00)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | ..............................
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | . Timing measurements:
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | . get job = 0 s
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | . initial setup = 18 s
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | . payload setup = 43 s
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | . stage-in = 4 s
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | . payload execution = 23831 s
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | . stage-out = 6 s
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | . log creation = 1 s
[2024-06-20 05:30:54] 2024-06-20 12:30:34,573 | INFO     | ..............................
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | 
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | job summary report
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | --------------------------------------------------
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | PanDA job id: 6236926303
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | task id: 38920995
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | errors: (none)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | pilot state: finished 
[2024-06-20 05:30:54] 2024-06-20 12:30:34,626 | INFO     | transexitcode: 0
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | exeerrorcode: 0
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | exeerrordiag: 
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | exitcode: 0
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | exitmsg: OK
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | cpuconsumptiontime: 77904 s
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | nevents: 400
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | neventsw: 0
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | pid: 131422
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | pgrp: 131422
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | corecount: 12
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | event service: False
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | sizes: {0: 2383673, 1: 2385206, 12: 2385206, 23: 2385440, 26: 2385468, 23880: 2420236, 23887: 2429190, 23889: 2429246, 23897: 2429416}
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | --------------------------------------------------
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | 
[2024-06-20 05:30:54] 2024-06-20 12:30:34,627 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,644 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,644 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 05:30:54] 2024-06-20 12:30:34,644 | INFO     | job 6236926303 has completed (purged errors)
[2024-06-20 05:30:54] 2024-06-20 12:30:34,644 | INFO     | overall cleanup function is called
[2024-06-20 05:30:54] 2024-06-20 12:30:35,651 | INFO     | --- collectZombieJob: --- 10, [131422]
[2024-06-20 05:30:54] 2024-06-20 12:30:35,651 | INFO     | zombie collector waiting for pid 131422
[2024-06-20 05:30:54] 2024-06-20 12:30:35,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 05:30:54] 2024-06-20 12:30:36,658 | INFO     | collected zombie processes
[2024-06-20 05:30:54] 2024-06-20 12:30:36,658 | INFO     | will now attempt to kill all subprocesses of pid=131422
[2024-06-20 05:30:54] 2024-06-20 12:30:37,003 | INFO     | process IDs to be killed: [131422] (in reverse order)
[2024-06-20 05:30:54] 2024-06-20 12:30:37,060 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 05:30:54] 2024-06-20 12:30:37,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 05:30:54] 2024-06-20 12:30:37,065 | INFO     | did not find any defunct processes belonging to 131422
[2024-06-20 05:30:54] 2024-06-20 12:30:37,068 | INFO     | did not find any defunct processes belonging to 131422
[2024-06-20 05:30:54] 2024-06-20 12:30:37,069 | INFO     | ready for new job
[2024-06-20 05:30:54] 2024-06-20 12:30:37,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 05:30:54] 2024-06-20 12:30:37,071 | INFO     | *************************************
[2024-06-20 05:30:54] 2024-06-20 12:30:37,071 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 05:30:54] 2024-06-20 12:30:37,071 | INFO     | *************************************
[2024-06-20 05:30:54] 2024-06-20 12:30:37,071 | INFO     | 
[2024-06-20 05:30:54] 2024-06-20 12:30:37,073 | INFO     | architecture information:
[2024-06-20 05:30:54] 2024-06-20 12:30:37,074 | INFO     | executing command: cat /etc/os-release
[2024-06-20 05:30:54] 2024-06-20 12:30:37,090 | INFO     | cat /etc/os-release:
[2024-06-20 05:30:54] NAME="CentOS Linux"
[2024-06-20 05:30:54] VERSION="7 (Core)"
[2024-06-20 05:30:54] ID="centos"
[2024-06-20 05:30:54] ID_LIKE="rhel fedora"
[2024-06-20 05:30:54] VERSION_ID="7"
[2024-06-20 05:30:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 05:30:54] ANSI_COLOR="0;31"
[2024-06-20 05:30:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 05:30:54] HOME_URL="https://www.centos.org/"
[2024-06-20 05:30:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 05:30:54] 
[2024-06-20 05:30:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 05:30:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 05:30:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 05:30:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 05:30:54] 
[2024-06-20 05:30:54] 2024-06-20 12:30:37,090 | INFO     | *************************************
[2024-06-20 05:30:54] 2024-06-20 12:30:37,593 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-20 05:30:54] 2024-06-20 12:30:37,627 | INFO     | sufficient remaining disk space (1691995865088 B)
[2024-06-20 05:30:54] 2024-06-20 12:30:37,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 05:30:54] 2024-06-20 12:30:37,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 05:30:54] 2024-06-20 12:30:37,628 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-20 05:30:54] 2024-06-20 12:30:37,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 05:30:54] 2024-06-20 12:30:37,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 05:30:54] 2024-06-20 12:30:37,628 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 05:30:54] 2024-06-20 12:30:37,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 05:30:54] 2024-06-20 12:30:37,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 05:30:54] 2024-06-20 12:30:37,632 | INFO     | all job control threads have been joined
[2024-06-20 05:30:54] 2024-06-20 12:30:37,648 | INFO     | all data control threads have been joined
[2024-06-20 05:30:54] 2024-06-20 12:30:38,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 05:30:54] 2024-06-20 12:30:38,149 | INFO     | aborting loop
[2024-06-20 05:30:54] 2024-06-20 12:30:38,633 | INFO     | [job] retrieve thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,639 | INFO     | [job] control thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,653 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,656 | INFO     | [data] control thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,679 | INFO     | [payload] failed_post thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,697 | INFO     | [payload] validate_post thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,735 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,745 | INFO     | [job] validate thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,789 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,790 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:38,857 | INFO     | all payload control threads have been joined
[2024-06-20 05:30:54] 2024-06-20 12:30:39,155 | INFO     | [job] job monitor thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:39,237 | INFO     | [data] copytool_in thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:39,637 | INFO     | [data] copytool_out thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:39,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 05:30:54] 2024-06-20 12:30:39,863 | INFO     | [payload] control thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:40,645 | INFO     | [job] queue monitor thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:41,699 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 05:30:54] 2024-06-20 12:30:43,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303630116672)>', '<ExcThread(monitor, started 140303193323264)>']
[2024-06-20 05:30:54] 2024-06-20 12:30:43,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 05:30:54] 2024-06-20 12:30:43,666 | INFO     | [monitor] control thread has ended
[2024-06-20 05:30:54] 2024-06-20 12:30:48,276 | INFO     | all workflow threads have been joined
[2024-06-20 05:30:54] 2024-06-20 12:30:48,276 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 05:30:54] 2024-06-20 12:30:48,339 | INFO     | traces error code: 0
[2024-06-20 05:30:54] 2024-06-20 12:30:48,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 05:30:54] 2024-06-20 12:30:49,238 [wrapper] ==== pilot stdout END ====
[2024-06-20 05:30:54] 2024-06-20 12:30:49,243 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 05:30:54] 2024-06-20 12:30:49,245 [wrapper] pilotpid: 124942
[2024-06-20 05:30:54] 2024-06-20 12:30:49,316 [wrapper] Pilot exit status: 0
[2024-06-20 05:30:54] 2024-06-20 12:30:49,973 [wrapper] pandaids: 6236926303
[2024-06-20 05:30:54] 2024-06-20 12:30:50,472 [wrapper] cleanup supervisor_pilot 168740 124943
[2024-06-20 05:30:54] 2024-06-20 12:30:50,475 [wrapper] Test setup, not cleaning
[2024-06-20 05:30:54] 2024-06-20 12:30:50,478 [wrapper] ==== wrapper stdout END ====
[2024-06-20 05:30:54] 2024-06-20 12:30:50,480 [wrapper] ==== wrapper stderr END ====
[2024-06-20 05:30:54] 2024-06-20 12:30:50,485 [wrapper] apfmon messages muted
[2024-06-20 05:30:54]  *** Error codes and diagnostics ***
[2024-06-20 05:30:54]     "exeErrorCode": 0,
[2024-06-20 05:30:54]     "exeErrorDiag": "",
[2024-06-20 05:30:54]     "pilotErrorCode": 0,
[2024-06-20 05:30:54]     "pilotErrorDiag": "",
[2024-06-20 05:30:54]  *** Listing of results directory ***
[2024-06-20 05:30:54] total 965772
[2024-06-20 05:30:54] -rwx------ 1 boinc boinc     32308 Jun 18 15:22 runpilot2-wrapper.sh
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc      5654 Jun 18 15:22 queuedata.json
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc    469766 Jun 18 15:22 pilot3.tar.gz
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc       100 Jun 19 22:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 05:30:54] -rwxr-xr-x 1 boinc boinc      7986 Jun 19 22:49 run_atlas
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc       105 Jun 19 22:49 job.xml
[2024-06-20 05:30:54] -rw-r--r-- 2 boinc boinc 633176013 Jun 19 22:49 EVNT.38776180._000877.pool.root.1
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc      6628 Jun 19 22:49 init_data.xml
[2024-06-20 05:30:54] drwxrwx--x 2 boinc boinc      4096 Jun 19 22:49 shared
[2024-06-20 05:30:54] -rw-r--r-- 2 boinc boinc    482521 Jun 19 22:49 input.tar.gz
[2024-06-20 05:30:54] -rw-r--r-- 2 boinc boinc     17537 Jun 19 22:49 start_atlas.sh
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc         0 Jun 19 22:49 boinc_lockfile
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc      2615 Jun 19 22:50 pandaJob.out
[2024-06-20 05:30:54] -rw------- 1 boinc boinc       424 Jun 19 22:50 setup.sh.local
[2024-06-20 05:30:54] -rw------- 1 boinc boinc   1019550 Jun 19 22:51 agis_schedconf.cvmfs.json
[2024-06-20 05:30:54] -rw------- 1 boinc boinc   1320365 Jun 19 22:51 cric_ddmendpoints.json
[2024-06-20 05:30:54] drwx------ 4 boinc boinc      4096 Jun 19 22:51 pilot3
[2024-06-20 05:30:54] -rw------- 1 boinc boinc 346284613 Jun 20 05:29 HITS.38920995._055920.pool.root.1
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc       532 Jun 20 05:29 boinc_task_state.xml
[2024-06-20 05:30:54] -rw------- 1 boinc boinc        95 Jun 20 05:29 pilot_heartbeat.json
[2024-06-20 05:30:54] -rw------- 1 boinc boinc      1066 Jun 20 05:30 memory_monitor_summary.json
[2024-06-20 05:30:54] -rw------- 1 boinc boinc         0 Jun 20 05:30 agis_ddmendpoints.agis.ALL.json
[2024-06-20 05:30:54] -rw------- 1 boinc boinc    563309 Jun 20 05:30 log.38920995._055920.job.log.tgz.1
[2024-06-20 05:30:54] -rw------- 1 boinc boinc      7789 Jun 20 05:30 heartbeat.json
[2024-06-20 05:30:54] -rw------- 1 boinc boinc      4333 Jun 20 05:30 pilotlog.txt
[2024-06-20 05:30:54] -rw------- 1 boinc boinc   2415355 Jun 20 05:30 log.38920995._055920.job.log.1
[2024-06-20 05:30:54] -rw------- 1 boinc boinc       357 Jun 20 05:30 output.list
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc       620 Jun 20 05:30 runtime_log
[2024-06-20 05:30:54] -rw------- 1 boinc boinc   3000320 Jun 20 05:30 result.tar.gz
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc     11287 Jun 20 05:30 runtime_log.err
[2024-06-20 05:30:54] -rw------- 1 boinc boinc       659 Jun 20 05:30 BbeKDmYOwd5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmqPWKDmmvB9Qn.diag
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc      8192 Jun 20 05:30 boinc_mmap_file
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc        28 Jun 20 05:30 wrapper_checkpoint.txt
[2024-06-20 05:30:54] -rw-r--r-- 1 boinc boinc     21983 Jun 20 05:30 stderr.txt
[2024-06-20 05:30:54] HITS file was successfully produced:
[2024-06-20 05:30:54] -rw------- 1 boinc boinc 346284613 Jun 20 05:29 shared/HITS.pool.root.1
[2024-06-20 05:30:54]  *** Contents of shared directory: ***
[2024-06-20 05:30:54] total 959940
[2024-06-20 05:30:54] -rw-r--r-- 2 boinc boinc 633176013 Jun 19 22:49 ATLAS.root_0
[2024-06-20 05:30:54] -rw-r--r-- 2 boinc boinc    482521 Jun 19 22:49 input.tar.gz
[2024-06-20 05:30:54] -rw-r--r-- 2 boinc boinc     17537 Jun 19 22:49 start_atlas.sh
[2024-06-20 05:30:54] -rw------- 1 boinc boinc 346284613 Jun 20 05:29 HITS.pool.root.1
[2024-06-20 05:30:54] -rw------- 1 boinc boinc   3000320 Jun 20 05:30 result.tar.gz
05:30:56 (118517): run_atlas exited; CPU time 77559.827522
05:30:56 (118517): called boinc_finish(0)

</stderr_txt>
]]>

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