Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-21 11:56:31 (96332): Detected: vboxwrapper 26206
2024-06-21 11:56:31 (96332): Detected: BOINC client v7.24.1
2024-06-21 11:56:31 (96332): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2024-06-21 11:56:32 (96332): Successfully copied 'init_data.xml' to the shared directory.
2024-06-21 11:56:33 (96332): Create VM. (boinc_de18c8b5913210c0, slot#7)
2024-06-21 11:56:33 (96332): Setting Memory Size for VM. (4800MB)
2024-06-21 11:56:34 (96332): Setting CPU Count for VM. (8)
2024-06-21 11:56:34 (96332): Setting Chipset Options for VM.
2024-06-21 11:56:34 (96332): Setting Graphics Controller Options for VM.
2024-06-21 11:56:34 (96332): Setting Boot Options for VM.
2024-06-21 11:56:35 (96332): Setting Network Configuration for NAT.
2024-06-21 11:56:35 (96332): Enabling VM Network Access.
2024-06-21 11:56:35 (96332): Disabling USB Support for VM.
2024-06-21 11:56:35 (96332): Disabling COM Port Support for VM.
2024-06-21 11:56:36 (96332): Disabling LPT Port Support for VM.
2024-06-21 11:56:36 (96332): Disabling Audio Support for VM.
2024-06-21 11:56:36 (96332): Disabling Clipboard Support for VM.
2024-06-21 11:56:36 (96332): Disabling Drag and Drop Support for VM.
2024-06-21 11:56:37 (96332): Adding storage controller(s) to VM.
2024-06-21 11:56:37 (96332): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-21 11:56:38 (96332): Adding VirtualBox Guest Additions to VM.
2024-06-21 11:56:38 (96332): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-21 11:56:38 (96332): forwarding host port 52007 to guest port 80
2024-06-21 11:56:39 (96332): Enabling remote desktop for VM.
2024-06-21 11:56:39 (96332): Required extension pack not installed, remote desktop not enabled.
2024-06-21 11:56:39 (96332): Enabling shared directory for VM.
2024-06-21 11:56:39 (96332): Starting VM using VBoxManage interface. (boinc_de18c8b5913210c0, slot#7)
2024-06-21 11:56:46 (96332): Successfully started VM. (PID = '102492')
2024-06-21 11:56:46 (96332): Reporting VM Process ID to BOINC.
2024-06-21 11:56:46 (96332): Guest Log: BIOS: VirtualBox 6.1.34
2024-06-21 11:56:46 (96332): Guest Log: CPUID EDX: 0x178bfbff
2024-06-21 11:56:46 (96332): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-21 11:56:46 (96332): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-21 11:56:46 (96332): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-21 11:56:46 (96332): Detected: Web Application Enabled (http://localhost:52007)
2024-06-21 11:56:46 (96332): Preference change detected
2024-06-21 11:56:46 (96332): Setting CPU throttle for VM. (100%)
2024-06-21 11:56:46 (96332): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-21 11:56:48 (96332): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-21 11:56:48 (96332): Guest Log: BIOS: Booting from Hard Disk...
2024-06-21 11:56:51 (96332): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-21 11:56:51 (96332): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-21 11:56:51 (96332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-21 11:57:03 (96332): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-21 11:57:03 (96332): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-21 11:57:17 (96332): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-21 11:57:17 (96332): Guest Log: 00:00:00.000306 main     Log opened 2024-06-21T11:57:15.701784000Z
2024-06-21 11:57:17 (96332): Guest Log: 00:00:00.000551 main     OS Product: Linux
2024-06-21 11:57:17 (96332): Guest Log: 00:00:00.000614 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-21 11:57:17 (96332): Guest Log: 00:00:00.000663 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-21 11:57:17 (96332): Guest Log: 00:00:00.000711 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-21 11:57:17 (96332): Guest Log: 00:00:00.000713 main     Process ID: 1368
2024-06-21 11:57:17 (96332): Guest Log: 00:00:00.000714 main     Package type: LINUX_64BITS_GENERIC
2024-06-21 11:57:17 (96332): Guest Log: 00:00:00.002000 main     5.2.32 r132073 started. Verbose level = 0
2024-06-21 11:57:17 (96332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-21 11:57:17 (96332): Guest Log: [INFO] Mounting shared directory
2024-06-21 11:57:18 (96332): Guest Log: [INFO] Checking for init_data.xml
2024-06-21 11:57:27 (96332): Guest Log: 00:00:10.006891 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 929 056 000ns (GuestNow=1 718 963 846 778 118 000 ns GuestLast=1 718 971 035 707 174 000 ns fSetTimeLastLoop=true )
2024-06-21 11:58:10 (96332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-21 11:58:10 (96332): Guest Log: [INFO] Detected branch: prod
2024-06-21 11:58:10 (96332): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-21 11:58:10 (96332): Guest Log: Copying input files
2024-06-21 11:58:16 (96332): Guest Log: Copied input files into RunAtlas.
2024-06-21 11:58:16 (96332): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-21 11:58:16 (96332): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-21 11:58:16 (96332): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-21 11:58:16 (96332): Guest Log: Further information can be found at the LHC@home message board.
2024-06-21 11:59:14 (96332): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-21 11:59:15 (96332): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-21 11:59:15 (96332): Guest Log: 2.6.3.0 1668 1 32024 134120 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-21 11:59:17 (96332): Guest Log: copied the webapp to /var/www
2024-06-21 11:59:18 (96332): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-21 11:59:18 (96332): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-21 11:59:18 (96332): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-21 11:59:18 (96332): Guest Log:  *** Starting ATLAS job. (PandaID=6236834665 taskID=38921013) ***
2024-06-21 13:36:50 (96332): Status Report: Elapsed Time: '6000.000000'
2024-06-21 13:36:50 (96332): Status Report: CPU Time: '37792.765625'
2024-06-21 15:16:54 (96332): Status Report: Elapsed Time: '12000.000000'
2024-06-21 15:16:54 (96332): Status Report: CPU Time: '85436.078125'
2024-06-21 16:56:59 (96332): Status Report: Elapsed Time: '18000.000000'
2024-06-21 16:56:59 (96332): Status Report: CPU Time: '133058.562500'
2024-06-21 18:37:04 (96332): Status Report: Elapsed Time: '24000.000000'
2024-06-21 18:37:04 (96332): Status Report: CPU Time: '180673.765625'
2024-06-21 20:17:08 (96332): Status Report: Elapsed Time: '30000.000000'
2024-06-21 20:17:08 (96332): Status Report: CPU Time: '228345.250000'
2024-06-21 21:03:13 (96332): Guest Log:  *** Job finished ***
2024-06-21 21:03:13 (96332): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:02:57,119 | INFO     | [data] queue_monitor thread has finished
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:03,019 | INFO     | job.realtimelogging is not enabled
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:04,023 | INFO     | [payload] run_realtimelog thread has finished
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:04,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301062461248)>', '<ExcThread(monitor, started 140300290856704)>']
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:05,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:05,564 | INFO     | [monitor] control thread has ended
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,708 | INFO     | all workflow threads have been joined
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,708 | INFO     | end of generic workflow (traces error code: 0)
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,708 | INFO     | traces error code: 0
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,830 [wrapper] ==== pilot stdout END ====
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,838 [wrapper] ==== wrapper stdout RESUME ====
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,846 [wrapper] pilotpid: 6581
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,854 [wrapper] Pilot exit status: 0
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:09,953 [wrapper] pandaids: 6236834665
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:10,011 [wrapper] cleanup supervisor_pilot 11917 6582
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:10,020 [wrapper] Test setup, not cleaning
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:10,028 [wrapper] ==== wrapper stdout END ====
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:10,036 [wrapper] ==== wrapper stderr END ====
2024-06-21 21:03:13 (96332): Guest Log: 2024-06-21 19:03:10,052 [wrapper] apfmon messages muted
2024-06-21 21:03:13 (96332): Guest Log:  *** Error codes and diagnostics ***
2024-06-21 21:03:13 (96332): Guest Log:     "exeErrorCode": 0,
2024-06-21 21:03:13 (96332): Guest Log:     "exeErrorDiag": "",
2024-06-21 21:03:13 (96332): Guest Log:     "pilotErrorCode": 0,
2024-06-21 21:03:13 (96332): Guest Log:     "pilotErrorDiag": "",
2024-06-21 21:03:13 (96332): Guest Log:  *** Listing of results directory ***
2024-06-21 21:03:13 (96332): Guest Log: total 346756
2024-06-21 21:03:13 (96332): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 18 21:17 pilot3.tar.gz
2024-06-21 21:03:13 (96332): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 18 21:29 runpilot2-wrapper.sh
2024-06-21 21:03:13 (96332): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 18 21:29 queuedata.json
2024-06-21 21:03:13 (96332): Guest Log: -rwxr-xr-x. 1 atlas atlas      9142 Jun 21 09:58 init_data.xml
2024-06-21 21:03:13 (96332): Guest Log: -rwxr-xr-x. 1 atlas atlas    482529 Jun 21 09:58 input.tar.gz
2024-06-21 21:03:13 (96332): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 21 09:58 start_atlas.sh
2024-06-21 21:03:13 (96332): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 21 09:58 EVNT.38776210._000391.pool.root.1 -> /data/./ATLAS.root_0
2024-06-21 21:03:13 (96332): Guest Log: -rw-r--r--. 1 atlas atlas      2646 Jun 21 09:59 pandaJob.out
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas       424 Jun 21 09:59 setup.sh.local
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas   1023162 Jun 21 10:00 agis_schedconf.cvmfs.json
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas   1321251 Jun 21 10:00 cric_ddmendpoints.json
2024-06-21 21:03:13 (96332): Guest Log: drwx------. 4 atlas atlas      4096 Jun 21 10:00 pilot3
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas 344160176 Jun 21 19:01 HITS.38921013._047100.pool.root.1
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas      1033 Jun 21 19:02 memory_monitor_summary.json
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas         0 Jun 21 19:02 agis_ddmendpoints.agis.ALL.json
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas    556453 Jun 21 19:02 log.38921013._047100.job.log.tgz.1
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas        95 Jun 21 19:02 pilot_heartbeat.json
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas      7751 Jun 21 19:02 heartbeat.json
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 21 19:03 pilotlog.txt
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas   3169520 Jun 21 19:03 log.38921013._047100.job.log.1
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas       357 Jun 21 19:03 output.list
2024-06-21 21:03:13 (96332): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 21 19:03 runtime_log
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas   3747840 Jun 21 19:03 result.tar.gz
2024-06-21 21:03:13 (96332): Guest Log: -rw-r--r--. 1 atlas atlas     10931 Jun 21 19:03 runtime_log.err
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas       649 Jun 21 19:03 HqjKDmtZvd5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm6NWKDmAAERUm.diag
2024-06-21 21:03:13 (96332): Guest Log: Looking for outputfile HITS.38921013._047100.pool.root.1
2024-06-21 21:03:13 (96332): Guest Log: HITS file was successfully produced
2024-06-21 21:03:13 (96332): Guest Log: -rw-------. 1 atlas atlas 344160176 Jun 21 19:01 /home/atlas/RunAtlas/HITS.38921013._047100.pool.root.1
2024-06-21 21:03:15 (96332): Guest Log: Successfully finished the ATLAS job!
2024-06-21 21:03:15 (96332): Guest Log: Copying the results back to the shared directory!
2024-06-21 21:03:15 (96332): Guest Log:  *** Contents of shared directory: ***
2024-06-21 21:03:15 (96332): Guest Log: total 868892
2024-06-21 21:03:15 (96332): Guest Log: -rwxrwxrwx. 1 root root 541316856 Jun 21 09:56 ATLAS.root_0
2024-06-21 21:03:15 (96332): Guest Log: -rwxrwxrwx. 1 root root 344160176 Jun 21 19:03 HITS.pool.root.1
2024-06-21 21:03:15 (96332): Guest Log: -rwxrwxrwx. 1 root root      9142 Jun 21 09:56 init_data.xml
2024-06-21 21:03:15 (96332): Guest Log: -rwxrwxrwx. 1 root root    482529 Jun 19 04:48 input.tar.gz
2024-06-21 21:03:15 (96332): Guest Log: -rwxrwxrwx. 1 root root   3747840 Jun 21 19:03 result.tar.gz
2024-06-21 21:03:15 (96332): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 19 04:48 start_atlas.sh
2024-06-21 21:03:15 (96332): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-21 21:03:15 (96332): VM Completion File Detected.
2024-06-21 21:03:15 (96332): Powering off VM.
2024-06-21 21:03:17 (96332): Successfully stopped VM.
2024-06-21 21:03:17 (96332): Deregistering VM. (boinc_de18c8b5913210c0, slot#7)
2024-06-21 21:03:17 (96332): Removing network bandwidth throttle group from VM.
2024-06-21 21:03:17 (96332): Removing VM from VirtualBox.
21:03:22 (96332): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN