Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:23:38 (1771983): wrapper (7.7.26015): starting
14:23:38 (1771983): wrapper: running run_atlas (--nthreads 6)
[2024-06-22 14:23:38] Arguments: --nthreads 6
[2024-06-22 14:23:38] Threads: 6
[2024-06-22 14:23:38] Checking for CVMFS
[2024-06-22 14:23:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 14:23:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 14:23:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 14:23:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 14:23:38] 2.11.2.0 9806 30772 68708 134166 3 61 4200916 6144001 915 130560 0 46479098 99.9845 4805840 3308 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.202:3128 1
[2024-06-22 14:23:38] CVMFS is ok
[2024-06-22 14:23:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 14:23:38] Checking for apptainer binary...
[2024-06-22 14:23:38] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 14:23:38] Running /usr/bin/apptainer --version
[2024-06-22 14:23:38] apptainer version 1.3.0
[2024-06-22 14:23:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 14:23:38] Ryzen5
[2024-06-22 14:23:38] apptainer works
[2024-06-22 14:23:38] Set ATHENA_PROC_NUMBER=6
[2024-06-22 14:23:38] Set ATHENA_CORE_NUMBER=6
[2024-06-22 14:23:38] Starting ATLAS job with PandaID=6236641060
[2024-06-22 14:23:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 19:46:00]  *** The last 200 lines of the pilot log: ***
[2024-06-22 19:46:00] 2024-06-22 17:45:37,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 19:46:00] 2024-06-22 17:45:39,959 | INFO     | monitor loop #1520: job 0:6236641060 is in state 'finished'
[2024-06-22 19:46:00] 2024-06-22 17:45:39,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,141 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 19:46:00] 2024-06-22 17:45:40,142 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6236641060/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,142 | INFO     | extracted standard info from prmon json
[2024-06-22 19:46:00] 2024-06-22 17:45:40,142 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 19:46:00] 2024-06-22 17:45:40,142 | WARNING  | GPU info not found in prmon json
[2024-06-22 19:46:00] 2024-06-22 17:45:40,143 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 19:46:00] 2024-06-22 17:45:40,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 19:46:00] 2024-06-22 17:45:40,146 | INFO     | fitting pss+swap vs Time
[2024-06-22 19:46:00] 2024-06-22 17:45:40,146 | INFO     | model: linear, x: [1719059047.0, 1719059108.0, 1719059169.0, 1719059230.0, 1719059291.0, 1719059352.0, 1719059413.0, 1719059474.0, 1719059535.0, 1719059596.0, 1719
[2024-06-22 19:46:00] 2024-06-22 17:45:40,147 | INFO     | sum of square deviations: 9784425315.0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,148 | INFO     | sum of deviations: -41202346208.50001
[2024-06-22 19:46:00] 2024-06-22 17:45:40,149 | INFO     | mean x: 1719068654.5
[2024-06-22 19:46:00] 2024-06-22 17:45:40,149 | INFO     | mean y: 2536257.091772152
[2024-06-22 19:46:00] 2024-06-22 17:45:40,149 | INFO     | -- intersect: 7241557413.531484
[2024-06-22 19:46:00] 2024-06-22 17:45:40,149 | INFO     | intersect: 7241557413.531484
[2024-06-22 19:46:00] 2024-06-22 17:45:40,149 | INFO     | chi2: 2.228189083407375
[2024-06-22 19:46:00] 2024-06-22 17:45:40,149 | INFO     | model: linear, x: [1719059047.0, 1719059108.0, 1719059169.0, 1719059230.0, 1719059291.0, 1719059352.0, 1719059413.0, 1719059474.0, 1719059535.0, 1719059596.0, 1719
[2024-06-22 19:46:00] 2024-06-22 17:45:40,149 | INFO     | sum of square deviations: 9327281860.0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,151 | INFO     | sum of deviations: -40427820882.00001
[2024-06-22 19:46:00] 2024-06-22 17:45:40,151 | INFO     | mean x: 1719068502.0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,151 | INFO     | mean y: 2536515.491961415
[2024-06-22 19:46:00] 2024-06-22 17:45:40,151 | INFO     | -- intersect: 7453602595.180913
[2024-06-22 19:46:00] 2024-06-22 17:45:40,151 | INFO     | intersect: 7453602595.180913
[2024-06-22 19:46:00] 2024-06-22 17:45:40,152 | INFO     | chi2: 2.226465807514664
[2024-06-22 19:46:00] 2024-06-22 17:45:40,152 | INFO     | current chi2=2.226465807514664 (change=0.07733975117029947 %)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,152 | INFO     | right removable region: 310
[2024-06-22 19:46:00] 2024-06-22 17:45:40,152 | INFO     | model: linear, x: [1719059352.0, 1719059413.0, 1719059474.0, 1719059535.0, 1719059596.0, 1719059657.0, 1719059718.0, 1719059779.0, 1719059840.0, 1719059901.0, 1719
[2024-06-22 19:46:00] 2024-06-22 17:45:40,152 | INFO     | sum of square deviations: 9327281860.0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,154 | INFO     | sum of deviations: -104363685672.99997
[2024-06-22 19:46:00] 2024-06-22 17:45:40,154 | INFO     | mean x: 1719068807.0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,154 | INFO     | mean y: 2557234.38585209
[2024-06-22 19:46:00] 2024-06-22 17:45:40,154 | INFO     | -- intersect: 19237352463.78691
[2024-06-22 19:46:00] 2024-06-22 17:45:40,154 | INFO     | intersect: 19237352463.78691
[2024-06-22 19:46:00] 2024-06-22 17:45:40,154 | INFO     | chi2: 0.37790215527074467
[2024-06-22 19:46:00] 2024-06-22 17:45:40,155 | INFO     | current chi2=0.37790215527074467 (change=83.03994225243883 %)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,155 | INFO     | model: linear, x: [1719059657.0, 1719059718.0, 1719059779.0, 1719059840.0, 1719059901.0, 1719059962.0, 1719060023.0, 1719060084.0, 1719060145.0, 1719060206.0, 1719
[2024-06-22 19:46:00] 2024-06-22 17:45:40,155 | INFO     | sum of square deviations: 8884603792.5
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | sum of deviations: -99599084954.50003
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | mean x: 1719068959.5
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | mean y: 2555577.8464052286
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | -- intersect: 19273836474.403557
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | intersect: 19273836474.403557
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | chi2: 0.3691458311990865
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | current chi2=0.3691458311990865 (change=2.317087624277975 %)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | left removable region: 20
[2024-06-22 19:46:00] 2024-06-22 17:45:40,157 | INFO     | model: linear, x: [1719060267.0, 1719060328.0, 1719060389.0, 1719060450.0, 1719060511.0, 1719060572.0, 1719060633.0, 1719060694.0, 1719060755.0, 1719060816.0, 1719
[2024-06-22 19:46:00] 2024-06-22 17:45:40,158 | INFO     | sum of square deviations: 7562532492.5
[2024-06-22 19:46:00] 2024-06-22 17:45:40,159 | INFO     | sum of deviations: -74859541965.99998
[2024-06-22 19:46:00] 2024-06-22 17:45:40,159 | INFO     | mean x: 1719069081.5
[2024-06-22 19:46:00] 2024-06-22 17:45:40,159 | INFO     | mean y: 2547703.4275862067
[2024-06-22 19:46:00] 2024-06-22 17:45:40,159 | INFO     | -- intersect: 17019165374.376694
[2024-06-22 19:46:00] 2024-06-22 17:45:40,159 | INFO     | intersect: 17019165374.376694
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | chi2: 0.33190586528841215
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | -- intersect: 17019165374.376694
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | current memory leak: -9.90 B/s (using 290 data points, chi2=0.33)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | ..............................
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | . Timing measurements:
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | . get job = 0 s
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | . initial setup = 1 s
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | . payload setup = 3 s
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | . stage-in = 0 s
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | . payload execution = 19246 s
[2024-06-22 19:46:00] 2024-06-22 17:45:40,160 | INFO     | . stage-out = 0 s
[2024-06-22 19:46:00] 2024-06-22 17:45:40,161 | INFO     | . log creation = 0 s
[2024-06-22 19:46:00] 2024-06-22 17:45:40,161 | INFO     | ..............................
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | 
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | job summary report
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | --------------------------------------------------
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | PanDA job id: 6236641060
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | task id: 38921013
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | errors: (none)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | pilot state: finished 
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | transexitcode: 0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | exeerrorcode: 0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | exeerrordiag: 
[2024-06-22 19:46:00] 2024-06-22 17:45:40,224 | INFO     | exitcode: 0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | exitmsg: OK
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | cpuconsumptiontime: 112179 s
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | nevents: 400
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | neventsw: 0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | pid: 1782647
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | pgrp: 1782647
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | corecount: 6
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | event service: False
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | sizes: {0: 2386862, 1: 2387061, 4: 2387267, 11: 2387295, 19253: 2420391, 19254: 2429351, 19256: 2429535, 19300: 2429705}
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | --------------------------------------------------
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | 
[2024-06-22 19:46:00] 2024-06-22 17:45:40,225 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | job 6236641060 has completed (purged errors)
[2024-06-22 19:46:00] 2024-06-22 17:45:40,243 | INFO     | overall cleanup function is called
[2024-06-22 19:46:00] 2024-06-22 17:45:41,251 | INFO     | --- collectZombieJob: --- 10, [1782647]
[2024-06-22 19:46:00] 2024-06-22 17:45:41,251 | INFO     | zombie collector waiting for pid 1782647
[2024-06-22 19:46:00] 2024-06-22 17:45:41,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 19:46:00] 2024-06-22 17:45:42,253 | INFO     | collected zombie processes
[2024-06-22 19:46:00] 2024-06-22 17:45:42,253 | INFO     | will now attempt to kill all subprocesses of pid=1782647
[2024-06-22 19:46:00] 2024-06-22 17:45:42,306 | INFO     | process IDs to be killed: [1782647] (in reverse order)
[2024-06-22 19:46:00] 2024-06-22 17:45:42,342 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 19:46:00] 2024-06-22 17:45:42,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 19:46:00] 2024-06-22 17:45:42,344 | INFO     | did not find any defunct processes belonging to 1782647
[2024-06-22 19:46:00] 2024-06-22 17:45:42,346 | INFO     | did not find any defunct processes belonging to 1782647
[2024-06-22 19:46:00] 2024-06-22 17:45:42,346 | INFO     | ready for new job
[2024-06-22 19:46:00] 2024-06-22 17:45:42,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 19:46:00] 2024-06-22 17:45:42,347 | INFO     | *************************************
[2024-06-22 19:46:00] 2024-06-22 17:45:42,347 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 19:46:00] 2024-06-22 17:45:42,347 | INFO     | *************************************
[2024-06-22 19:46:00] 2024-06-22 17:45:42,348 | INFO     | 
[2024-06-22 19:46:00] 2024-06-22 17:45:42,348 | INFO     | architecture information:
[2024-06-22 19:46:00] 2024-06-22 17:45:42,348 | INFO     | executing command: cat /etc/os-release
[2024-06-22 19:46:00] 2024-06-22 17:45:42,361 | INFO     | cat /etc/os-release:
[2024-06-22 19:46:00] NAME="CentOS Linux"
[2024-06-22 19:46:00] VERSION="7 (Core)"
[2024-06-22 19:46:00] ID="centos"
[2024-06-22 19:46:00] ID_LIKE="rhel fedora"
[2024-06-22 19:46:00] VERSION_ID="7"
[2024-06-22 19:46:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 19:46:00] ANSI_COLOR="0;31"
[2024-06-22 19:46:00] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 19:46:00] HOME_URL="https://www.centos.org/"
[2024-06-22 19:46:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 19:46:00] 
[2024-06-22 19:46:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 19:46:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 19:46:00] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 19:46:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 19:46:00] 
[2024-06-22 19:46:00] 2024-06-22 17:45:42,361 | INFO     | *************************************
[2024-06-22 19:46:00] 2024-06-22 17:45:42,864 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-22 19:46:00] 2024-06-22 17:45:42,877 | INFO     | sufficient remaining disk space (401681154048 B)
[2024-06-22 19:46:00] 2024-06-22 17:45:42,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 19:46:00] 2024-06-22 17:45:42,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 19:46:00] 2024-06-22 17:45:42,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 19:46:00] 2024-06-22 17:45:42,878 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 19:46:00] 2024-06-22 17:45:42,878 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 19:46:00] 2024-06-22 17:45:42,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 19:46:00] 2024-06-22 17:45:42,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 19:46:00] 2024-06-22 17:45:42,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 19:46:00] 2024-06-22 17:45:42,990 | INFO     | all job control threads have been joined
[2024-06-22 19:46:00] 2024-06-22 17:45:43,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 19:46:00] 2024-06-22 17:45:43,468 | INFO     | aborting loop
[2024-06-22 19:46:00] 2024-06-22 17:45:43,540 | INFO     | all data control threads have been joined
[2024-06-22 19:46:00] 2024-06-22 17:45:43,882 | INFO     | all payload control threads have been joined
[2024-06-22 19:46:00] 2024-06-22 17:45:43,883 | INFO     | [job] retrieve thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:43,931 | INFO     | [data] copytool_in thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:43,971 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:43,995 | INFO     | [job] control thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:44,145 | INFO     | [payload] validate_post thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:44,449 | INFO     | [payload] failed_post thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:44,473 | INFO     | [job] job monitor thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:44,543 | INFO     | [data] control thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:44,883 | INFO     | [data] copytool_out thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:44,887 | INFO     | [payload] control thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:45,196 | INFO     | [job] validate thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:45,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 19:46:00] 2024-06-22 17:45:45,314 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:45,380 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:46,236 | INFO     | [job] queue monitor thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:46,883 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:53,756 | INFO     | job.realtimelogging is not enabled
[2024-06-22 19:46:00] 2024-06-22 17:45:54,762 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 19:46:00] 2024-06-22 17:45:55,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139688804357952)>', '<ExcThread(monitor, started 139687997974272)>']
[2024-06-22 19:46:00] 2024-06-22 17:45:55,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 19:46:00] 2024-06-22 17:45:55,926 | INFO     | [monitor] control thread has ended
[2024-06-22 19:46:00] 2024-06-22 17:46:00,516 | INFO     | all workflow threads have been joined
[2024-06-22 19:46:00] 2024-06-22 17:46:00,516 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 19:46:00] 2024-06-22 17:46:00,517 | INFO     | traces error code: 0
[2024-06-22 19:46:00] 2024-06-22 17:46:00,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 19:46:00] 2024-06-22 17:46:00,585 [wrapper] ==== pilot stdout END ====
[2024-06-22 19:46:00] 2024-06-22 17:46:00,587 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 19:46:00] 2024-06-22 17:46:00,589 [wrapper] pilotpid: 1776190
[2024-06-22 19:46:00] 2024-06-22 17:46:00,591 [wrapper] Pilot exit status: 0
[2024-06-22 19:46:00] 2024-06-22 17:46:00,599 [wrapper] pandaids: 6236641060
[2024-06-22 19:46:00] 2024-06-22 17:46:00,621 [wrapper] cleanup supervisor_pilot 1880581 1776191
[2024-06-22 19:46:00] 2024-06-22 17:46:00,623 [wrapper] Test setup, not cleaning
[2024-06-22 19:46:00] 2024-06-22 17:46:00,625 [wrapper] ==== wrapper stdout END ====
[2024-06-22 19:46:00] 2024-06-22 17:46:00,627 [wrapper] ==== wrapper stderr END ====
[2024-06-22 19:46:00] 2024-06-22 17:46:00,631 [wrapper] apfmon messages muted
[2024-06-22 19:46:00]  *** Error codes and diagnostics ***
[2024-06-22 19:46:00]     "exeErrorCode": 0,
[2024-06-22 19:46:00]     "exeErrorDiag": "",
[2024-06-22 19:46:00]     "pilotErrorCode": 0,
[2024-06-22 19:46:00]     "pilotErrorDiag": "",
[2024-06-22 19:46:00]  *** Listing of results directory ***
[2024-06-22 19:46:00] insgesamt 871736
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc    469766 18. Jun 20:23 pilot3.tar.gz
[2024-06-22 19:46:00] -rwx------ 1 boinc boinc     32308 18. Jun 20:35 runpilot2-wrapper.sh
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc      5654 18. Jun 20:35 queuedata.json
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc       100 22. Jun 14:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 19:46:00] -rwxr-xr-x 1 boinc boinc      7986 22. Jun 14:23 run_atlas
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc       105 22. Jun 14:23 job.xml
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc      6865 22. Jun 14:23 init_data.xml
[2024-06-22 19:46:00] -rw-r--r-- 2 boinc boinc 541013197 22. Jun 14:23 EVNT.38776210._000687.pool.root.1
[2024-06-22 19:46:00] drwxrwx--x 2 boinc boinc      4096 22. Jun 14:23 shared
[2024-06-22 19:46:00] -rw-r--r-- 2 boinc boinc    482529 22. Jun 14:23 input.tar.gz
[2024-06-22 19:46:00] -rw-r--r-- 2 boinc boinc     17537 22. Jun 14:23 start_atlas.sh
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc         0 22. Jun 14:23 boinc_lockfile
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc      2647 22. Jun 14:23 pandaJob.out
[2024-06-22 19:46:00] -rw------- 1 boinc boinc       461 22. Jun 14:23 setup.sh.local
[2024-06-22 19:46:00] -rw------- 1 boinc boinc   1025938 22. Jun 14:23 agis_schedconf.cvmfs.json
[2024-06-22 19:46:00] -rw------- 1 boinc boinc   1321363 22. Jun 14:23 cric_ddmendpoints.json
[2024-06-22 19:46:00] drwx------ 4 boinc boinc      4096 22. Jun 14:23 pilot3
[2024-06-22 19:46:00] -rw------- 1 boinc boinc 343481419 22. Jun 19:44 HITS.38921013._046565.pool.root.1
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc       533 22. Jun 19:44 boinc_task_state.xml
[2024-06-22 19:46:00] -rw------- 1 boinc boinc      1020 22. Jun 19:44 memory_monitor_summary.json
[2024-06-22 19:46:00] -rw------- 1 boinc boinc         0 22. Jun 19:44 agis_ddmendpoints.agis.ALL.json
[2024-06-22 19:46:00] -rw------- 1 boinc boinc    413075 22. Jun 19:44 log.38921013._046565.job.log.tgz.1
[2024-06-22 19:46:00] -rw------- 1 boinc boinc        95 22. Jun 19:45 pilot_heartbeat.json
[2024-06-22 19:46:00] -rw------- 1 boinc boinc      7641 22. Jun 19:45 heartbeat.json
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc      8192 22. Jun 19:45 boinc_mmap_file
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc        29 22. Jun 19:45 wrapper_checkpoint.txt
[2024-06-22 19:46:00] -rw------- 1 boinc boinc      4407 22. Jun 19:46 pilotlog.txt
[2024-06-22 19:46:00] -rw------- 1 boinc boinc   1899775 22. Jun 19:46 log.38921013._046565.job.log.1
[2024-06-22 19:46:00] -rw------- 1 boinc boinc       357 22. Jun 19:46 output.list
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc       620 22. Jun 19:46 runtime_log
[2024-06-22 19:46:00] -rw------- 1 boinc boinc   2334720 22. Jun 19:46 result.tar.gz
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc     11321 22. Jun 19:46 runtime_log.err
[2024-06-22 19:46:00] -rw------- 1 boinc boinc       637 22. Jun 19:46 PWyMDmoqsd5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmFIWKDmMCiskm.diag
[2024-06-22 19:46:00] -rw-r--r-- 1 boinc boinc     21319 22. Jun 19:46 stderr.txt
[2024-06-22 19:46:00] HITS file was successfully produced:
[2024-06-22 19:46:00] -rw------- 1 boinc boinc 343481419 22. Jun 19:44 shared/HITS.pool.root.1
[2024-06-22 19:46:00]  *** Contents of shared directory: ***
[2024-06-22 19:46:00] insgesamt 866548
[2024-06-22 19:46:00] -rw-r--r-- 2 boinc boinc 541013197 22. Jun 14:23 ATLAS.root_0
[2024-06-22 19:46:00] -rw-r--r-- 2 boinc boinc    482529 22. Jun 14:23 input.tar.gz
[2024-06-22 19:46:00] -rw-r--r-- 2 boinc boinc     17537 22. Jun 14:23 start_atlas.sh
[2024-06-22 19:46:00] -rw------- 1 boinc boinc 343481419 22. Jun 19:44 HITS.pool.root.1
[2024-06-22 19:46:00] -rw------- 1 boinc boinc   2334720 22. Jun 19:46 result.tar.gz
19:46:02 (1771983): run_atlas exited; CPU time 112107.261036
19:46:02 (1771983): called boinc_finish(0)

</stderr_txt>
]]>

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