Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
17:03:51 (1415): wrapper (7.7.26015): starting
17:03:51 (1415): wrapper: running run_atlas (--nthreads 12)
[2024-06-19 17:03:51] Arguments: --nthreads 12
[2024-06-19 17:03:51] Threads: 12
[2024-06-19 17:03:51] Checking for CVMFS
[2024-06-19 17:03:51] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-19 17:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-19 17:03:52] Running cvmfs_config stat atlas.cern.ch
[2024-06-19 17:03:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-19 17:03:53] 2.10.1.0 196204 231694 169308 134071 3 166 34885068 45568000 10042 130560 0 726090020 99.762 475541827 3022 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-19 17:03:53] CVMFS is ok
[2024-06-19 17:03:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-19 17:03:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-19 17:03:53] Further information can be found at the LHC@home message board.
[2024-06-19 17:03:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-19 17:03:53] Checking for apptainer binary...
[2024-06-19 17:03:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-19 17:03:53] Running /usr/bin/apptainer --version
[2024-06-19 17:03:55] apptainer version 1.3.2-1.el7
[2024-06-19 17:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-19 17:03:57] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0032.triumf.lcg
[2024-06-19 17:03:57] apptainer works
[2024-06-19 17:03:57] Set ATHENA_PROC_NUMBER=12
[2024-06-19 17:03:57] Set ATHENA_CORE_NUMBER=12
[2024-06-19 17:03:57] Starting ATLAS job with PandaID=6236605456
[2024-06-19 17:03:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-19 22:49:23]  *** The last 200 lines of the pilot log: ***
[2024-06-19 22:49:23] 2024-06-20 05:48:57,499 | INFO     | model: linear, x: [1718841887.0, 1718841948.0, 1718842011.0, 1718842070.0, 1718842132.0, 1718842192.0, 1718842256.0, 1718842314.0, 1718842376.0, 1718842436.0, 1718
[2024-06-19 22:49:23] 2024-06-20 05:48:57,500 | INFO     | sum of square deviations: 11348633457.67465
[2024-06-19 22:49:23] 2024-06-20 05:48:57,501 | INFO     | sum of deviations: 282539309719.012
[2024-06-19 22:49:23] 2024-06-20 05:48:57,501 | INFO     | mean x: 1718851983.2349398
[2024-06-19 22:49:23] 2024-06-20 05:48:57,501 | INFO     | mean y: 2666465.1024096385
[2024-06-19 22:49:23] 2024-06-20 05:48:57,501 | INFO     | -- intersect: -42790437626.55654
[2024-06-19 22:49:23] 2024-06-20 05:48:57,501 | INFO     | intersect: -42790437626.55654
[2024-06-19 22:49:23] 2024-06-20 05:48:57,502 | INFO     | chi2: 5.914881382829055
[2024-06-19 22:49:23] 2024-06-20 05:48:57,502 | INFO     | current chi2=5.914881382829055 (change=11.492166720029164 %)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,502 | INFO     | right removable region: 331
[2024-06-19 22:49:23] 2024-06-20 05:48:57,502 | INFO     | model: linear, x: [1718842192.0, 1718842256.0, 1718842314.0, 1718842376.0, 1718842436.0, 1718842497.0, 1718842558.0, 1718842619.0, 1718842680.0, 1718842741.0, 1718
[2024-06-19 22:49:23] 2024-06-20 05:48:57,502 | INFO     | sum of square deviations: 11348685211.746962
[2024-06-19 22:49:23] 2024-06-20 05:48:57,504 | INFO     | sum of deviations: 164683719495.69867
[2024-06-19 22:49:23] 2024-06-20 05:48:57,504 | INFO     | mean x: 1718852288.246988
[2024-06-19 22:49:23] 2024-06-20 05:48:57,504 | INFO     | mean y: 2689259.198795181
[2024-06-19 22:49:23] 2024-06-20 05:48:57,504 | INFO     | -- intersect: -24940022853.320255
[2024-06-19 22:49:23] 2024-06-20 05:48:57,504 | INFO     | intersect: -24940022853.320255
[2024-06-19 22:49:23] 2024-06-20 05:48:57,504 | INFO     | chi2: 3.8721620854280125
[2024-06-19 22:49:23] 2024-06-20 05:48:57,504 | INFO     | current chi2=3.8721620854280125 (change=42.058571574233795 %)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,504 | INFO     | model: linear, x: [1718842497.0, 1718842558.0, 1718842619.0, 1718842680.0, 1718842741.0, 1718842802.0, 1718842864.0, 1718842924.0, 1718842985.0, 1718843046.0, 1718
[2024-06-19 22:49:23] 2024-06-20 05:48:57,505 | INFO     | sum of square deviations: 10843695301.932673
[2024-06-19 22:49:23] 2024-06-20 05:48:57,506 | INFO     | sum of deviations: 91642108914.6177
[2024-06-19 22:49:23] 2024-06-20 05:48:57,506 | INFO     | mean x: 1718852440.7461774
[2024-06-19 22:49:23] 2024-06-20 05:48:57,506 | INFO     | mean y: 2711315.6941896025
[2024-06-19 22:49:23] 2024-06-20 05:48:57,506 | INFO     | -- intersect: -14523634011.893816
[2024-06-19 22:49:23] 2024-06-20 05:48:57,506 | INFO     | intersect: -14523634011.893816
[2024-06-19 22:49:23] 2024-06-20 05:48:57,506 | INFO     | chi2: 2.4325021847918045
[2024-06-19 22:49:23] 2024-06-20 05:48:57,507 | INFO     | current chi2=2.4325021847918045 (change=37.17974270896447 %)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,507 | INFO     | model: linear, x: [1718842802.0, 1718842864.0, 1718842924.0, 1718842985.0, 1718843046.0, 1718843107.0, 1718843172.0, 1718843229.0, 1718843290.0, 1718843351.0, 1718
[2024-06-19 22:49:23] 2024-06-20 05:48:57,507 | INFO     | sum of square deviations: 10353834951.605652
[2024-06-19 22:49:23] 2024-06-20 05:48:57,508 | INFO     | sum of deviations: 24762116449.76711
[2024-06-19 22:49:23] 2024-06-20 05:48:57,508 | INFO     | mean x: 1718852593.2577639
[2024-06-19 22:49:23] 2024-06-20 05:48:57,508 | INFO     | mean y: 2732101.5931677017
[2024-06-19 22:49:23] 2024-06-20 05:48:57,509 | INFO     | -- intersect: -4108056632.549483
[2024-06-19 22:49:23] 2024-06-20 05:48:57,509 | INFO     | intersect: -4108056632.549483
[2024-06-19 22:49:23] 2024-06-20 05:48:57,509 | INFO     | chi2: 1.1270857802295768
[2024-06-19 22:49:23] 2024-06-20 05:48:57,509 | INFO     | current chi2=1.1270857802295768 (change=53.66557994166641 %)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,509 | INFO     | model: linear, x: [1718843107.0, 1718843172.0, 1718843229.0, 1718843290.0, 1718843351.0, 1718843412.0, 1718843478.0, 1718843534.0, 1718843596.0, 1718843656.0, 1718
[2024-06-19 22:49:23] 2024-06-20 05:48:57,509 | INFO     | sum of square deviations: 9878971390.72562
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | sum of deviations: -1829589604.0567741
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | mean x: 1718852745.7665615
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | mean y: 2740642.2965299683
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | -- intersect: 321072884.60986197
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | intersect: 321072884.60986197
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | chi2: 0.9386775917668765
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | current chi2=0.9386775917668765 (change=16.71640187176555 %)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | left removable region: 40
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | model: linear, x: [1718844328.0, 1718844390.0, 1718844449.0, 1718844510.0, 1718844571.0, 1718844632.0, 1718844693.0, 1718844754.0, 1718844815.0, 1718844876.0, 1718
[2024-06-19 22:49:23] 2024-06-20 05:48:57,511 | INFO     | sum of square deviations: 7642263289.553218
[2024-06-19 22:49:23] 2024-06-20 05:48:57,513 | INFO     | sum of deviations: -3573233741.9828196
[2024-06-19 22:49:23] 2024-06-20 05:48:57,513 | INFO     | mean x: 1718853172.7285223
[2024-06-19 22:49:23] 2024-06-20 05:48:57,513 | INFO     | mean y: 2756531.202749141
[2024-06-19 22:49:23] 2024-06-20 05:48:57,513 | INFO     | -- intersect: 806427370.7959825
[2024-06-19 22:49:23] 2024-06-20 05:48:57,513 | INFO     | intersect: 806427370.7959825
[2024-06-19 22:49:23] 2024-06-20 05:48:57,513 | INFO     | chi2: 0.013807721740305093
[2024-06-19 22:49:23] 2024-06-20 05:48:57,513 | INFO     | -- intersect: 806427370.7959825
[2024-06-19 22:49:23] 2024-06-20 05:48:57,513 | INFO     | current memory leak: -0.47 B/s (using 291 data points, chi2=0.01)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | ..............................
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | . Timing measurements:
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | . get job = 0 s
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | . initial setup = 4 s
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | . payload setup = 8 s
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | . stage-in = 0 s
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | . payload execution = 20557 s
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | . stage-out = 11 s
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | . log creation = 0 s
[2024-06-19 22:49:23] 2024-06-20 05:48:57,514 | INFO     | ..............................
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | 
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | job summary report
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | --------------------------------------------------
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | PanDA job id: 6236605456
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | task id: 38921013
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | errors: (none)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | pilot state: finished 
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | transexitcode: 0
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | exeerrorcode: 0
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | exeerrordiag: 
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | exitcode: 0
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | exitmsg: OK
[2024-06-19 22:49:23] 2024-06-20 05:48:57,570 | INFO     | cpuconsumptiontime: 104297 s
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | nevents: 400
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | neventsw: 0
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | pid: 14001
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | pgrp: 14001
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | corecount: 12
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | event service: False
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | sizes: {0: 2384969, 1: 2385168, 6: 2385374, 12: 2385402, 20574: 2418578, 20575: 2418577, 20587: 2427771, 20664: 2427885}
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | --------------------------------------------------
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | 
[2024-06-19 22:49:23] 2024-06-20 05:48:57,571 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-19 22:49:23] 2024-06-20 05:48:57,587 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,588 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,589 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-19 22:49:23] 2024-06-20 05:48:57,589 | INFO     | job 6236605456 has completed (purged errors)
[2024-06-19 22:49:23] 2024-06-20 05:48:57,589 | INFO     | overall cleanup function is called
[2024-06-19 22:49:23] 2024-06-20 05:48:58,597 | INFO     | --- collectZombieJob: --- 10, [14001]
[2024-06-19 22:49:23] 2024-06-20 05:48:58,613 | INFO     | zombie collector waiting for pid 14001
[2024-06-19 22:49:23] 2024-06-20 05:48:58,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-19 22:49:23] 2024-06-20 05:48:59,617 | INFO     | collected zombie processes
[2024-06-19 22:49:23] 2024-06-20 05:48:59,617 | INFO     | will now attempt to kill all subprocesses of pid=14001
[2024-06-19 22:49:23] 2024-06-20 05:49:05,452 | INFO     | process IDs to be killed: [14001] (in reverse order)
[2024-06-19 22:49:23] 2024-06-20 05:49:05,614 | WARNING  | found no corresponding commands to process id(s)
[2024-06-19 22:49:23] 2024-06-20 05:49:05,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-19 22:49:23] 2024-06-20 05:49:05,620 | INFO     | did not find any defunct processes belonging to 14001
[2024-06-19 22:49:23] 2024-06-20 05:49:05,625 | INFO     | did not find any defunct processes belonging to 14001
[2024-06-19 22:49:23] 2024-06-20 05:49:05,626 | INFO     | ready for new job
[2024-06-19 22:49:23] 2024-06-20 05:49:05,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-19 22:49:23] 2024-06-20 05:49:05,628 | INFO     | *************************************
[2024-06-19 22:49:23] 2024-06-20 05:49:05,628 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-19 22:49:23] 2024-06-20 05:49:05,628 | INFO     | *************************************
[2024-06-19 22:49:23] 2024-06-20 05:49:05,628 | INFO     | 
[2024-06-19 22:49:23] 2024-06-20 05:49:05,631 | INFO     | architecture information:
[2024-06-19 22:49:23] 2024-06-20 05:49:05,632 | INFO     | executing command: cat /etc/os-release
[2024-06-19 22:49:23] 2024-06-20 05:49:05,735 | INFO     | cat /etc/os-release:
[2024-06-19 22:49:23] NAME="CentOS Linux"
[2024-06-19 22:49:23] VERSION="7 (Core)"
[2024-06-19 22:49:23] ID="centos"
[2024-06-19 22:49:23] ID_LIKE="rhel fedora"
[2024-06-19 22:49:23] VERSION_ID="7"
[2024-06-19 22:49:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-19 22:49:23] ANSI_COLOR="0;31"
[2024-06-19 22:49:23] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-19 22:49:23] HOME_URL="https://www.centos.org/"
[2024-06-19 22:49:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-19 22:49:23] 
[2024-06-19 22:49:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-19 22:49:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-19 22:49:23] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-19 22:49:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-19 22:49:23] 
[2024-06-19 22:49:23] 2024-06-20 05:49:05,735 | INFO     | *************************************
[2024-06-19 22:49:23] 2024-06-20 05:49:06,238 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-19 22:49:23] 2024-06-20 05:49:06,447 | INFO     | sufficient remaining disk space (1800915648512 B)
[2024-06-19 22:49:23] 2024-06-20 05:49:06,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-19 22:49:23] 2024-06-20 05:49:06,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-19 22:49:23] 2024-06-20 05:49:06,448 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-19 22:49:23] 2024-06-20 05:49:06,448 | INFO     | found 0 job(s) in 20 queues
[2024-06-19 22:49:23] 2024-06-20 05:49:06,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-19 22:49:23] 2024-06-20 05:49:06,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-19 22:49:23] 2024-06-20 05:49:06,582 | INFO     | all data control threads have been joined
[2024-06-19 22:49:23] 2024-06-20 05:49:06,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-19 22:49:23] 2024-06-20 05:49:06,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-19 22:49:23] 2024-06-20 05:49:06,730 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-19 22:49:23] 2024-06-20 05:49:06,730 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-19 22:49:23] 2024-06-20 05:49:06,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-19 22:49:23] 2024-06-20 05:49:06,731 | INFO     | will abort loop
[2024-06-19 22:49:23] 2024-06-20 05:49:07,453 | INFO     | [job] retrieve thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:07,588 | INFO     | [data] control thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:07,598 | INFO     | [job] queue monitor thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:07,722 | INFO     | all payload control threads have been joined
[2024-06-19 22:49:23] 2024-06-20 05:49:07,736 | INFO     | [job] job monitor thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:07,757 | INFO     | [payload] failed_post thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:07,790 | INFO     | [payload] execute_payloads thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:07,855 | INFO     | [payload] validate_post thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:07,963 | INFO     | [data] copytool_in thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:08,054 | INFO     | all job control threads have been joined
[2024-06-19 22:49:23] 2024-06-20 05:49:08,062 | INFO     | [job] create_data_payload thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:08,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-19 22:49:23] 2024-06-20 05:49:08,328 | INFO     | [job] validate thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:08,367 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:08,607 | INFO     | [payload] validate_pre thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:08,645 | INFO     | [data] copytool_out thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:08,746 | INFO     | [payload] control thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:09,059 | INFO     | [job] control thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:12,211 | INFO     | [data] queue_monitor thread has finished
[2024-06-19 22:49:23] 2024-06-20 05:49:12,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200463058752)>', '<ExcThread(monitor, started 140199812134656)>']
[2024-06-19 22:49:23] 2024-06-20 05:49:13,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-19 22:49:23] 2024-06-20 05:49:13,543 | INFO     | [monitor] control thread has ended
[2024-06-19 22:49:23] 2024-06-20 05:49:18,021 | INFO     | all workflow threads have been joined
[2024-06-19 22:49:23] 2024-06-20 05:49:18,021 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-19 22:49:23] 2024-06-20 05:49:18,087 | INFO     | traces error code: 0
[2024-06-19 22:49:23] 2024-06-20 05:49:18,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-19 22:49:23] 2024-06-20 05:49:21,919 [wrapper] ==== pilot stdout END ====
[2024-06-19 22:49:23] 2024-06-20 05:49:21,922 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-19 22:49:23] 2024-06-20 05:49:21,924 [wrapper] pilotpid: 5626
[2024-06-19 22:49:23] 2024-06-20 05:49:21,926 [wrapper] Pilot exit status: 0
[2024-06-19 22:49:23] 2024-06-20 05:49:21,942 [wrapper] pandaids: 6236605456
[2024-06-19 22:49:23] 2024-06-20 05:49:21,984 [wrapper] cleanup supervisor_pilot 118415 5627
[2024-06-19 22:49:23] 2024-06-20 05:49:21,986 [wrapper] Test setup, not cleaning
[2024-06-19 22:49:23] 2024-06-20 05:49:21,988 [wrapper] ==== wrapper stdout END ====
[2024-06-19 22:49:23] 2024-06-20 05:49:21,990 [wrapper] ==== wrapper stderr END ====
[2024-06-19 22:49:23] 2024-06-20 05:49:21,994 [wrapper] apfmon messages muted
[2024-06-19 22:49:23]  *** Error codes and diagnostics ***
[2024-06-19 22:49:23]     "exeErrorCode": 0,
[2024-06-19 22:49:23]     "exeErrorDiag": "",
[2024-06-19 22:49:23]     "pilotErrorCode": 0,
[2024-06-19 22:49:23]     "pilotErrorDiag": "",
[2024-06-19 22:49:23]  *** Listing of results directory ***
[2024-06-19 22:49:23] total 871656
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc    469766 Jun 18 09:54 pilot3.tar.gz
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc      5654 Jun 18 10:38 queuedata.json
[2024-06-19 22:49:23] -rwx------ 1 boinc boinc     32308 Jun 18 10:39 runpilot2-wrapper.sh
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc       100 Jun 19 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-19 22:49:23] -rwxr-xr-x 1 boinc boinc      7986 Jun 19 17:03 run_atlas
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc       105 Jun 19 17:03 job.xml
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc      6628 Jun 19 17:03 init_data.xml
[2024-06-19 22:49:23] -rw-r--r-- 2 boinc boinc 539860544 Jun 19 17:03 EVNT.38776210._000568.pool.root.1
[2024-06-19 22:49:23] -rw-r--r-- 2 boinc boinc     17537 Jun 19 17:03 start_atlas.sh
[2024-06-19 22:49:23] drwxrwx--x 2 boinc boinc      4096 Jun 19 17:03 shared
[2024-06-19 22:49:23] -rw-r--r-- 2 boinc boinc    482529 Jun 19 17:03 input.tar.gz
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc         0 Jun 19 17:03 boinc_lockfile
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc      2647 Jun 19 17:03 pandaJob.out
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc      2380 Jun 19 17:03 stderr.txt
[2024-06-19 22:49:23] -rw------- 1 boinc boinc       424 Jun 19 17:03 setup.sh.local
[2024-06-19 22:49:23] -rw------- 1 boinc boinc   1021692 Jun 19 17:04 agis_schedconf.cvmfs.json
[2024-06-19 22:49:23] -rw------- 1 boinc boinc   1320365 Jun 19 17:04 cric_ddmendpoints.json
[2024-06-19 22:49:23] drwx------ 4 boinc boinc      4096 Jun 19 17:04 pilot3
[2024-06-19 22:49:23] -rw------- 1 boinc boinc 343938071 Jun 19 22:45 HITS.38921013._046417.pool.root.1
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc       533 Jun 19 22:45 boinc_task_state.xml
[2024-06-19 22:49:23] -rw------- 1 boinc boinc      1070 Jun 19 22:47 memory_monitor_summary.json
[2024-06-19 22:49:23] -rw------- 1 boinc boinc         0 Jun 19 22:47 agis_ddmendpoints.agis.ALL.json
[2024-06-19 22:49:23] -rw------- 1 boinc boinc    523967 Jun 19 22:47 log.38921013._046417.job.log.tgz.1
[2024-06-19 22:49:23] -rw------- 1 boinc boinc        95 Jun 19 22:48 pilot_heartbeat.json
[2024-06-19 22:49:23] -rw------- 1 boinc boinc      7798 Jun 19 22:48 heartbeat.json
[2024-06-19 22:49:23] -rw------- 1 boinc boinc      4519 Jun 19 22:49 pilotlog.txt
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc      8192 Jun 19 22:49 boinc_mmap_file
[2024-06-19 22:49:23] -rw------- 1 boinc boinc   2106738 Jun 19 22:49 log.38921013._046417.job.log.1
[2024-06-19 22:49:23] -rw------- 1 boinc boinc       357 Jun 19 22:49 output.list
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc       620 Jun 19 22:49 runtime_log
[2024-06-19 22:49:23] -rw------- 1 boinc boinc   2652160 Jun 19 22:49 result.tar.gz
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc     11287 Jun 19 22:49 runtime_log.err
[2024-06-19 22:49:23] -rw------- 1 boinc boinc       660 Jun 19 22:49 CiUNDmhyrd5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmQJjKDmYHRGtn.diag
[2024-06-19 22:49:23] -rw-r--r-- 1 boinc boinc        29 Jun 19 22:49 wrapper_checkpoint.txt
[2024-06-19 22:49:23] HITS file was successfully produced:
[2024-06-19 22:49:23] -rw------- 1 boinc boinc 343938071 Jun 19 22:45 shared/HITS.pool.root.1
[2024-06-19 22:49:23]  *** Contents of shared directory: ***
[2024-06-19 22:49:23] total 866180
[2024-06-19 22:49:23] -rw-r--r-- 2 boinc boinc 539860544 Jun 19 17:03 ATLAS.root_0
[2024-06-19 22:49:23] -rw-r--r-- 2 boinc boinc     17537 Jun 19 17:03 start_atlas.sh
[2024-06-19 22:49:23] -rw-r--r-- 2 boinc boinc    482529 Jun 19 17:03 input.tar.gz
[2024-06-19 22:49:23] -rw------- 1 boinc boinc 343938071 Jun 19 22:45 HITS.pool.root.1
[2024-06-19 22:49:23] -rw------- 1 boinc boinc   2652160 Jun 19 22:49 result.tar.gz
22:49:24 (1415): run_atlas exited; CPU time 103922.490827
22:49:24 (1415): called boinc_finish(0)

</stderr_txt>
]]>

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