Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:02:29 (1612709): wrapper (7.7.26015): starting
08:02:29 (1612709): wrapper: running run_atlas (--nthreads 6)
[2024-06-22 08:02:29] Arguments: --nthreads 6
[2024-06-22 08:02:29] Threads: 6
[2024-06-22 08:02:29] Checking for CVMFS
[2024-06-22 08:02:29] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 08:02:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 08:02:29] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 08:02:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 08:02:29] 2.11.2.0 9806 30391 68748 134155 0 56 4020420 6144000 915 130560 0 45813624 99.9844 4752648 3324 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.202:3128 1
[2024-06-22 08:02:29] CVMFS is ok
[2024-06-22 08:02:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 08:02:29] Checking for apptainer binary...
[2024-06-22 08:02:29] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 08:02:29] Running /usr/bin/apptainer --version
[2024-06-22 08:02:29] apptainer version 1.3.0
[2024-06-22 08:02:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 08:02:29] Ryzen5
[2024-06-22 08:02:29] apptainer works
[2024-06-22 08:02:29] Set ATHENA_PROC_NUMBER=6
[2024-06-22 08:02:29] Set ATHENA_CORE_NUMBER=6
[2024-06-22 08:02:29] Starting ATLAS job with PandaID=6237645526
[2024-06-22 08:02:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 09:39:23]  *** The last 200 lines of the pilot log: ***
[2024-06-22 09:39:23]  ddmendpoint=NDGF-T1_DATADISK
[2024-06-22 09:39:23]  direct_access_lan=False
[2024-06-22 09:39:23]  direct_access_wan=False
[2024-06-22 09:39:23]  domain=
[2024-06-22 09:39:23]  filesize=291274
[2024-06-22 09:39:23]  filetype=log
[2024-06-22 09:39:23]  guid=91f4f91a-2568-40c0-ac25-006935376e36
[2024-06-22 09:39:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-22 09:39:23]  is_tar=False
[2024-06-22 09:39:23]  lfn=log.38776125._064157.job.log.tgz.1
[2024-06-22 09:39:23]  mtime=0
[2024-06-22 09:39:23]  protocol_id=None
[2024-06-22 09:39:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-22 09:39:23]  replicas=None
[2024-06-22 09:39:23]  scope=mc23_13p6TeV
[2024-06-22 09:39:23]  status=None
[2024-06-22 09:39:23]  status_code=0
[2024-06-22 09:39:23]  storage_token=
[2024-06-22 09:39:23]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6237645526/log.38776125._064157.job.log.tgz.1
[2024-06-22 09:39:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/4e/log.38776125._064157.job.log.tgz.1
[2024-06-22 09:39:23]  workdir=None
[2024-06-22 09:39:23] ]
[2024-06-22 09:39:23] 2024-06-22 07:38:58,757 | INFO     | transferring file log.38776125._064157.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6237645526/log.38776125._064157.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-06-22 09:39:23] 2024-06-22 07:38:58,757 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6237645526/log.38776125._064157.job.log.tgz.1 /var/lib/boinc/slots/0/log.38776125._064157.job
[2024-06-22 09:39:23] 2024-06-22 07:38:58,773 | INFO     | adding to output.list: log.38776125._064157.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/4e/log.38776125._064157.job.log.tg
[2024-06-22 09:39:23] 2024-06-22 07:38:58,774 | INFO     | summary of transferred files:
[2024-06-22 09:39:23] 2024-06-22 07:38:58,774 | INFO     |  -- lfn=log.38776125._064157.job.log.tgz.1, status_code=0, status=transferred
[2024-06-22 09:39:23] 2024-06-22 07:38:58,774 | INFO     | stage-out finished correctly
[2024-06-22 09:39:23] 2024-06-22 07:39:00,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-22 09:39:23] 2024-06-22 07:39:00,693 | INFO     | job 6237645526 has state=finished
[2024-06-22 09:39:23] 2024-06-22 07:39:00,694 | INFO     | preparing for final server update for job 6237645526 in state='finished'
[2024-06-22 09:39:23] 2024-06-22 07:39:00,694 | INFO     | this job has now completed (state=finished)
[2024-06-22 09:39:23] 2024-06-22 07:39:00,694 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-22 09:39:23] 2024-06-22 07:39:00,694 | INFO     | job 6237645526 has finished - writing final server update
[2024-06-22 09:39:23] 2024-06-22 07:39:00,694 | INFO     | total number of processed events: 400 (read)
[2024-06-22 09:39:23] 2024-06-22 07:39:00,696 | INFO     | executing command: lscpu
[2024-06-22 09:39:23] 2024-06-22 07:39:00,715 | INFO     | found 6 cores (6 cores per socket, 1 sockets)
[2024-06-22 09:39:23] 2024-06-22 07:39:00,715 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-22 09:39:23] 2024-06-22 07:39:00,740 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-22 09:39:23] 2024-06-22 07:39:04,318 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 09:39:23] 2024-06-22 07:39:04,318 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6237645526/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 09:39:23] 2024-06-22 07:39:04,319 | INFO     | extracted standard info from prmon json
[2024-06-22 09:39:23] 2024-06-22 07:39:04,319 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 09:39:23] 2024-06-22 07:39:04,319 | WARNING  | GPU info not found in prmon json
[2024-06-22 09:39:23] 2024-06-22 07:39:04,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 09:39:23] 2024-06-22 07:39:04,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 09:39:23] 2024-06-22 07:39:04,325 | INFO     | fitting pss+swap vs Time
[2024-06-22 09:39:23] 2024-06-22 07:39:04,325 | INFO     | model: linear, x: [1719036483.0, 1719036544.0, 1719036605.0, 1719036666.0, 1719036727.0, 1719036788.0, 1719036849.0, 1719036910.0, 1719036971.0, 1719037032.0, 1719
[2024-06-22 09:39:23] 2024-06-22 07:39:04,326 | INFO     | sum of square deviations: 211285822.0
[2024-06-22 09:39:23] 2024-06-22 07:39:04,326 | INFO     | sum of deviations: 1210564337.0
[2024-06-22 09:39:23] 2024-06-22 07:39:04,326 | INFO     | mean x: 1719039136.5
[2024-06-22 09:39:23] 2024-06-22 07:39:04,326 | INFO     | mean y: 2496453.2954545454
[2024-06-22 09:39:23] 2024-06-22 07:39:04,326 | INFO     | -- intersect: -9846756340.174877
[2024-06-22 09:39:23] 2024-06-22 07:39:04,326 | INFO     | intersect: -9846756340.174877
[2024-06-22 09:39:23] 2024-06-22 07:39:04,326 | INFO     | chi2: 0.014807561535685378
[2024-06-22 09:39:23] 2024-06-22 07:39:04,326 | INFO     | -- intersect: -9846756340.174877
[2024-06-22 09:39:23] 2024-06-22 07:39:04,327 | INFO     | current memory leak: 5.73 B/s (using 88 data points, chi2=0.01)
[2024-06-22 09:39:23] 2024-06-22 07:39:04,327 | INFO     | ..............................
[2024-06-22 09:39:23] 2024-06-22 07:39:04,327 | INFO     | . Timing measurements:
[2024-06-22 09:39:23] 2024-06-22 07:39:04,327 | INFO     | . get job = 0 s
[2024-06-22 09:39:23] 2024-06-22 07:39:04,327 | INFO     | . initial setup = 1 s
[2024-06-22 09:39:23] 2024-06-22 07:39:04,327 | INFO     | . payload setup = 3 s
[2024-06-22 09:39:23] 2024-06-22 07:39:04,327 | INFO     | . stage-in = 0 s
[2024-06-22 09:39:23] 2024-06-22 07:39:04,327 | INFO     | . payload execution = 5760 s
[2024-06-22 09:39:23] 2024-06-22 07:39:04,328 | INFO     | . stage-out = 0 s
[2024-06-22 09:39:23] 2024-06-22 07:39:04,328 | INFO     | . log creation = 0 s
[2024-06-22 09:39:23] 2024-06-22 07:39:04,328 | INFO     | ..............................
[2024-06-22 09:39:23] 2024-06-22 07:39:04,391 | WARNING  | process 1623375 is no longer using CPU - aborting
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | 
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | aborting job monitoring since job object (job id=6237645526) has expired
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | job summary report
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | --------------------------------------------------
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | PanDA job id: 6237645526
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | task id: 38776125
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | errors: (none)
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 09:39:23] 2024-06-22 07:39:04,398 | INFO     | pilot state: finished 
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | transexitcode: 0
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | exeerrorcode: 0
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | exeerrordiag: 
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | exitcode: 0
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | exitmsg: OK
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | cpuconsumptiontime: 32196 s
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | nevents: 400
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | neventsw: 0
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | pid: 1623375
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | pgrp: 1623375
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | corecount: 6
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | event service: False
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | sizes: {0: 2387061, 3: 2387267, 11: 2387295, 5767: 2413947, 5768: 2422907, 5769: 2422963, 5773: 2423261}
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | --------------------------------------------------
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | 
[2024-06-22 09:39:23] 2024-06-22 07:39:04,399 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-22 09:39:23] 2024-06-22 07:39:04,416 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,418 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 09:39:23] 2024-06-22 07:39:04,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,418 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 09:39:23] 2024-06-22 07:39:04,418 | INFO     | job 6237645526 has completed (purged errors)
[2024-06-22 09:39:23] 2024-06-22 07:39:04,418 | INFO     | overall cleanup function is called
[2024-06-22 09:39:23] 2024-06-22 07:39:05,423 | INFO     | --- collectZombieJob: --- 10, [1623375]
[2024-06-22 09:39:23] 2024-06-22 07:39:05,423 | INFO     | zombie collector waiting for pid 1623375
[2024-06-22 09:39:23] 2024-06-22 07:39:05,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 09:39:23] 2024-06-22 07:39:06,429 | INFO     | collected zombie processes
[2024-06-22 09:39:23] 2024-06-22 07:39:06,429 | INFO     | will now attempt to kill all subprocesses of pid=1623375
[2024-06-22 09:39:23] 2024-06-22 07:39:06,484 | INFO     | process IDs to be killed: [1623375] (in reverse order)
[2024-06-22 09:39:23] 2024-06-22 07:39:06,521 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 09:39:23] 2024-06-22 07:39:06,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 09:39:23] 2024-06-22 07:39:06,523 | INFO     | did not find any defunct processes belonging to 1623375
[2024-06-22 09:39:23] 2024-06-22 07:39:06,525 | INFO     | did not find any defunct processes belonging to 1623375
[2024-06-22 09:39:23] 2024-06-22 07:39:06,525 | INFO     | ready for new job
[2024-06-22 09:39:23] 2024-06-22 07:39:06,525 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 09:39:23] 2024-06-22 07:39:06,526 | INFO     | *************************************
[2024-06-22 09:39:23] 2024-06-22 07:39:06,526 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 09:39:23] 2024-06-22 07:39:06,526 | INFO     | *************************************
[2024-06-22 09:39:23] 2024-06-22 07:39:06,526 | INFO     | 
[2024-06-22 09:39:23] 2024-06-22 07:39:06,527 | INFO     | architecture information:
[2024-06-22 09:39:23] 2024-06-22 07:39:06,527 | INFO     | executing command: cat /etc/os-release
[2024-06-22 09:39:23] 2024-06-22 07:39:06,540 | INFO     | cat /etc/os-release:
[2024-06-22 09:39:23] NAME="CentOS Linux"
[2024-06-22 09:39:23] VERSION="7 (Core)"
[2024-06-22 09:39:23] ID="centos"
[2024-06-22 09:39:23] ID_LIKE="rhel fedora"
[2024-06-22 09:39:23] VERSION_ID="7"
[2024-06-22 09:39:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 09:39:23] ANSI_COLOR="0;31"
[2024-06-22 09:39:23] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 09:39:23] HOME_URL="https://www.centos.org/"
[2024-06-22 09:39:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 09:39:23] 
[2024-06-22 09:39:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 09:39:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 09:39:23] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 09:39:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 09:39:23] 
[2024-06-22 09:39:23] 2024-06-22 07:39:06,540 | INFO     | *************************************
[2024-06-22 09:39:23] 2024-06-22 07:39:07,043 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-22 09:39:23] 2024-06-22 07:39:07,056 | INFO     | sufficient remaining disk space (402012504064 B)
[2024-06-22 09:39:23] 2024-06-22 07:39:07,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 09:39:23] 2024-06-22 07:39:07,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 09:39:23] 2024-06-22 07:39:07,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 09:39:23] 2024-06-22 07:39:07,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 09:39:23] 2024-06-22 07:39:07,486 | INFO     | all data control threads have been joined
[2024-06-22 09:39:23] 2024-06-22 07:39:07,875 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 09:39:23] 2024-06-22 07:39:07,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 09:39:23] 2024-06-22 07:39:07,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 09:39:23] 2024-06-22 07:39:07,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 09:39:23] 2024-06-22 07:39:07,903 | INFO     | aborting loop
[2024-06-22 09:39:23] 2024-06-22 07:39:08,057 | INFO     | [job] retrieve thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:08,080 | INFO     | all job control threads have been joined
[2024-06-22 09:39:23] 2024-06-22 07:39:08,130 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:08,137 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:08,193 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:08,488 | INFO     | [data] control thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:08,552 | INFO     | all payload control threads have been joined
[2024-06-22 09:39:23] 2024-06-22 07:39:08,859 | INFO     | [payload] validate_post thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:08,909 | INFO     | [job] job monitor thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:09,062 | INFO     | [data] copytool_out thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:09,083 | INFO     | [job] control thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:09,257 | INFO     | [job] validate thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:09,385 | INFO     | [data] copytool_in thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:09,393 | INFO     | [payload] failed_post thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:09,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 09:39:23] 2024-06-22 07:39:09,557 | INFO     | [payload] control thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:10,407 | INFO     | [job] queue monitor thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:11,062 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:17,260 | INFO     | job.realtimelogging is not enabled
[2024-06-22 09:39:23] 2024-06-22 07:39:18,265 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 09:39:23] 2024-06-22 07:39:18,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456436315968)>', '<ExcThread(monitor, started 140455815665408)>']
[2024-06-22 09:39:23] 2024-06-22 07:39:18,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 09:39:23] 2024-06-22 07:39:18,918 | INFO     | [monitor] control thread has ended
[2024-06-22 09:39:23] 2024-06-22 07:39:23,497 | INFO     | all workflow threads have been joined
[2024-06-22 09:39:23] 2024-06-22 07:39:23,497 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 09:39:23] 2024-06-22 07:39:23,497 | INFO     | traces error code: 0
[2024-06-22 09:39:23] 2024-06-22 07:39:23,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 09:39:23] 2024-06-22 07:39:23,566 [wrapper] ==== pilot stdout END ====
[2024-06-22 09:39:23] 2024-06-22 07:39:23,568 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 09:39:23] 2024-06-22 07:39:23,570 [wrapper] pilotpid: 1616912
[2024-06-22 09:39:23] 2024-06-22 07:39:23,572 [wrapper] Pilot exit status: 0
[2024-06-22 09:39:23] 2024-06-22 07:39:23,580 [wrapper] pandaids: 6237645526
[2024-06-22 09:39:23] 2024-06-22 07:39:23,603 [wrapper] cleanup supervisor_pilot 1661093 1616913
[2024-06-22 09:39:23] 2024-06-22 07:39:23,605 [wrapper] Test setup, not cleaning
[2024-06-22 09:39:23] 2024-06-22 07:39:23,607 [wrapper] ==== wrapper stdout END ====
[2024-06-22 09:39:23] 2024-06-22 07:39:23,609 [wrapper] ==== wrapper stderr END ====
[2024-06-22 09:39:23] 2024-06-22 07:39:23,613 [wrapper] apfmon messages muted
[2024-06-22 09:39:23]  *** Error codes and diagnostics ***
[2024-06-22 09:39:23]     "exeErrorCode": 0,
[2024-06-22 09:39:23]     "exeErrorDiag": "",
[2024-06-22 09:39:23]     "pilotErrorCode": 0,
[2024-06-22 09:39:23]     "pilotErrorDiag": "",
[2024-06-22 09:39:23]  *** Listing of results directory ***
[2024-06-22 09:39:23] insgesamt 826644
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc    469766 18. Jun 13:58 pilot3.tar.gz
[2024-06-22 09:39:23] -rwx------ 1 boinc boinc     32308 18. Jun 14:13 runpilot2-wrapper.sh
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc      5654 18. Jun 14:13 queuedata.json
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc       100 22. Jun 08:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 09:39:23] -rwxr-xr-x 1 boinc boinc      7986 22. Jun 08:02 run_atlas
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc       105 22. Jun 08:02 job.xml
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc      6865 22. Jun 08:02 init_data.xml
[2024-06-22 09:39:23] -rw-r--r-- 2 boinc boinc 601136515 22. Jun 08:02 EVNT.38776119._000791.pool.root.1
[2024-06-22 09:39:23] drwxrwx--x 2 boinc boinc      4096 22. Jun 08:02 shared
[2024-06-22 09:39:23] -rw-r--r-- 2 boinc boinc    482530 22. Jun 08:02 input.tar.gz
[2024-06-22 09:39:23] -rw-r--r-- 2 boinc boinc     17537 22. Jun 08:02 start_atlas.sh
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc         0 22. Jun 08:02 boinc_lockfile
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc      2633 22. Jun 08:02 pandaJob.out
[2024-06-22 09:39:23] -rw------- 1 boinc boinc       461 22. Jun 08:02 setup.sh.local
[2024-06-22 09:39:23] -rw------- 1 boinc boinc   1025961 22. Jun 08:02 agis_schedconf.cvmfs.json
[2024-06-22 09:39:23] -rw------- 1 boinc boinc         0 22. Jun 08:02 agis_ddmendpoints.agis.ALL.json
[2024-06-22 09:39:23] -rw------- 1 boinc boinc   1321363 22. Jun 08:02 cric_ddmendpoints.json
[2024-06-22 09:39:23] drwx------ 4 boinc boinc      4096 22. Jun 08:02 pilot3
[2024-06-22 09:39:23] -rw------- 1 boinc boinc 240140878 22. Jun 09:38 HITS.38776125._064157.pool.root.1
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc       531 22. Jun 09:38 boinc_task_state.xml
[2024-06-22 09:39:23] -rw------- 1 boinc boinc        95 22. Jun 09:38 pilot_heartbeat.json
[2024-06-22 09:39:23] -rw------- 1 boinc boinc      1020 22. Jun 09:38 memory_monitor_summary.json
[2024-06-22 09:39:23] -rw------- 1 boinc boinc    291274 22. Jun 09:38 log.38776125._064157.job.log.tgz.1
[2024-06-22 09:39:23] -rw------- 1 boinc boinc      7639 22. Jun 09:39 heartbeat.json
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc      8192 22. Jun 09:39 boinc_mmap_file
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc        27 22. Jun 09:39 wrapper_checkpoint.txt
[2024-06-22 09:39:23] -rw------- 1 boinc boinc      4284 22. Jun 09:39 pilotlog.txt
[2024-06-22 09:39:23] -rw------- 1 boinc boinc    542153 22. Jun 09:39 log.38776125._064157.job.log.1
[2024-06-22 09:39:23] -rw------- 1 boinc boinc       357 22. Jun 09:39 output.list
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc       620 22. Jun 09:39 runtime_log
[2024-06-22 09:39:23] -rw------- 1 boinc boinc    849920 22. Jun 09:39 result.tar.gz
[2024-06-22 09:39:23] -rw------- 1 boinc boinc       631 22. Jun 09:39 wB3NDm5smd5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmSAWKDmwXwiUo.diag
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc     11320 22. Jun 09:39 runtime_log.err
[2024-06-22 09:39:23] -rw-r--r-- 1 boinc boinc     20617 22. Jun 09:39 stderr.txt
[2024-06-22 09:39:23] HITS file was successfully produced:
[2024-06-22 09:39:23] -rw------- 1 boinc boinc 240140878 22. Jun 09:38 shared/HITS.pool.root.1
[2024-06-22 09:39:23]  *** Contents of shared directory: ***
[2024-06-22 09:39:23] insgesamt 822896
[2024-06-22 09:39:23] -rw-r--r-- 2 boinc boinc 601136515 22. Jun 08:02 ATLAS.root_0
[2024-06-22 09:39:23] -rw-r--r-- 2 boinc boinc    482530 22. Jun 08:02 input.tar.gz
[2024-06-22 09:39:23] -rw-r--r-- 2 boinc boinc     17537 22. Jun 08:02 start_atlas.sh
[2024-06-22 09:39:23] -rw------- 1 boinc boinc 240140878 22. Jun 09:38 HITS.pool.root.1
[2024-06-22 09:39:23] -rw------- 1 boinc boinc    849920 22. Jun 09:39 result.tar.gz
09:39:24 (1612709): run_atlas exited; CPU time 32164.576917
09:39:24 (1612709): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN