Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-19 06:16:41 (337421): Detected: vboxwrapper 26206
2024-06-19 06:16:41 (337421): Detected: BOINC client v7.24.1
2024-06-19 06:16:42 (337421): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-06-19 06:16:42 (337421): Successfully copied 'init_data.xml' to the shared directory.
2024-06-19 06:16:42 (337421): Create VM. (boinc_522f8ec9118ee562, slot#0)
2024-06-19 06:16:42 (337421): Setting Memory Size for VM. (4800MB)
2024-06-19 06:16:42 (337421): Setting CPU Count for VM. (8)
2024-06-19 06:16:42 (337421): Setting Chipset Options for VM.
2024-06-19 06:16:42 (337421): Setting Graphics Controller Options for VM.
2024-06-19 06:16:42 (337421): Setting Boot Options for VM.
2024-06-19 06:16:42 (337421): Setting Network Configuration for NAT.
2024-06-19 06:16:42 (337421): Enabling VM Network Access.
2024-06-19 06:16:42 (337421): Disabling USB Support for VM.
2024-06-19 06:16:42 (337421): Disabling COM Port Support for VM.
2024-06-19 06:16:42 (337421): Disabling LPT Port Support for VM.
2024-06-19 06:16:42 (337421): Disabling Audio Support for VM.
2024-06-19 06:16:42 (337421): Disabling Clipboard Support for VM.
2024-06-19 06:16:42 (337421): Disabling Drag and Drop Support for VM.
2024-06-19 06:16:42 (337421): Adding storage controller(s) to VM.
2024-06-19 06:16:42 (337421): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-19 06:16:43 (337421): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-19 06:16:44 (337421): forwarding host port 47111 to guest port 80
2024-06-19 06:16:44 (337421): Enabling remote desktop for VM.
2024-06-19 06:16:44 (337421): Required extension pack not installed, remote desktop not enabled.
2024-06-19 06:16:44 (337421): Enabling shared directory for VM.
2024-06-19 06:16:44 (337421): Starting VM using VBoxManage interface. (boinc_522f8ec9118ee562, slot#0)
2024-06-19 06:16:45 (337421): Successfully started VM. (PID = '337677')
2024-06-19 06:16:45 (337421): Reporting VM Process ID to BOINC.
2024-06-19 06:16:45 (337421): Guest Log: BIOS: VirtualBox 7.0.14
2024-06-19 06:16:45 (337421): Guest Log: CPUID EDX: 0x178bfbff
2024-06-19 06:16:45 (337421): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-19 06:16:45 (337421): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-19 06:16:45 (337421): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-19 06:16:45 (337421): Detected: Web Application Enabled (http://localhost:47111)
2024-06-19 06:16:46 (337421): VM state change detected. (old = 'running', new = 'paused')
2024-06-19 06:17:05 (337421): Preference change detected
2024-06-19 06:17:05 (337421): Setting CPU throttle for VM. (50%)
2024-06-19 06:17:05 (337421): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-19 06:17:06 (337421): VM state change detected. (old = 'paused', new = 'running')
2024-06-19 06:17:07 (337421): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-19 06:17:07 (337421): Guest Log: BIOS: Booting from Hard Disk...
2024-06-19 06:17:10 (337421): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-19 06:17:10 (337421): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-19 06:17:10 (337421): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-19 06:17:25 (337421): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-19 06:17:25 (337421): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-19 06:17:32 (337421): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-19 06:17:32 (337421): Guest Log: 00:00:00.000151 main     Log opened 2024-06-19T04:17:10.818113000Z
2024-06-19 06:17:32 (337421): Guest Log: 00:00:00.000233 main     OS Product: Linux
2024-06-19 06:17:32 (337421): Guest Log: 00:00:00.000244 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-19 06:17:32 (337421): Guest Log: 00:00:00.000254 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-19 06:17:32 (337421): Guest Log: 00:00:00.000263 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-19 06:17:32 (337421): Guest Log: 00:00:00.000263 main     Process ID: 1359
2024-06-19 06:17:32 (337421): Guest Log: 00:00:00.000263 main     Package type: LINUX_64BITS_GENERIC
2024-06-19 06:17:32 (337421): Guest Log: 00:00:00.000585 main     5.2.32 r132073 started. Verbose level = 0
2024-06-19 06:17:32 (337421): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-19 06:17:32 (337421): Guest Log: [INFO] Mounting shared directory
2024-06-19 06:17:33 (337421): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-19 06:17:35 (337421): Guest Log: [INFO] Checking for init_data.xml
2024-06-19 06:17:35 (337421): Guest Log: [INFO] Detected branch: prod
2024-06-19 06:17:35 (337421): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-19 06:17:35 (337421): Guest Log: Copying input files
2024-06-19 06:17:37 (337421): Guest Log: Copied input files into RunAtlas.
2024-06-19 06:17:37 (337421): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-19 06:17:37 (337421): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-19 06:17:37 (337421): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-19 06:17:37 (337421): Guest Log: Further information can be found at the LHC@home message board.
2024-06-19 06:17:44 (337421): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-19 06:17:44 (337421): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-19 06:17:44 (337421): Guest Log: 2.6.3.0 1627 0 30256 134038 4 1 3117205 4096000 0 65024 0 0 n/a 1 3 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-19 06:17:45 (337421): Guest Log: copied the webapp to /var/www
2024-06-19 06:17:45 (337421): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-19 06:17:45 (337421): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-19 06:17:45 (337421): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-19 06:17:45 (337421): Guest Log:  *** Starting ATLAS job. (PandaID=6235806738 taskID=38921007) ***
2024-06-19 07:56:05 (337421): Status Report: Elapsed Time: '6000.000000'
2024-06-19 07:56:05 (337421): Status Report: CPU Time: '18467.680000'
2024-06-19 09:35:05 (337421): Status Report: Elapsed Time: '12000.000000'
2024-06-19 09:35:05 (337421): Status Report: CPU Time: '41025.890000'
2024-06-19 11:14:06 (337421): Status Report: Elapsed Time: '18000.000000'
2024-06-19 11:14:06 (337421): Status Report: CPU Time: '63565.760000'
2024-06-19 11:58:11 (337421): Guest Log:  *** Job finished ***
2024-06-19 11:58:11 (337421): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:34,197 | INFO     | [data] queue_monitor thread has finished
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:37,583 | INFO     | job.realtimelogging is not enabled
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:38,584 | INFO     | [payload] run_realtimelog thread has finished
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:40,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704300250944)>', '<ExcThread(monitor, started 140703699023616)>']
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:41,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:41,702 | INFO     | [monitor] control thread has ended
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:45,961 | INFO     | all workflow threads have been joined
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:45,961 | INFO     | end of generic workflow (traces error code: 0)
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:45,961 | INFO     | traces error code: 0
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:45,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,092 [wrapper] ==== pilot stdout END ====
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,095 [wrapper] ==== wrapper stdout RESUME ====
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,099 [wrapper] pilotpid: 6537
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,102 [wrapper] Pilot exit status: 0
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,127 [wrapper] pandaids: 6235806738
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,147 [wrapper] cleanup supervisor_pilot 20544 6538
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,151 [wrapper] Test setup, not cleaning
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,154 [wrapper] ==== wrapper stdout END ====
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,157 [wrapper] ==== wrapper stderr END ====
2024-06-19 11:58:11 (337421): Guest Log: 2024-06-19 09:57:46,164 [wrapper] apfmon messages muted
2024-06-19 11:58:11 (337421): Guest Log:  *** Error codes and diagnostics ***
2024-06-19 11:58:11 (337421): Guest Log:     "exeErrorCode": 0,
2024-06-19 11:58:11 (337421): Guest Log:     "exeErrorDiag": "",
2024-06-19 11:58:11 (337421): Guest Log:     "pilotErrorCode": 0,
2024-06-19 11:58:11 (337421): Guest Log:     "pilotErrorDiag": "",
2024-06-19 11:58:11 (337421): Guest Log:  *** Listing of results directory ***
2024-06-19 11:58:11 (337421): Guest Log: total 353888
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 18 05:55 pilot3.tar.gz
2024-06-19 11:58:11 (337421): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 18 05:59 runpilot2-wrapper.sh
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 18 05:59 queuedata.json
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 19 04:17 start_atlas.sh
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 atlas atlas    482532 Jun 19 04:17 input.tar.gz
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 atlas atlas      6821 Jun 19 04:17 init_data.xml
2024-06-19 11:58:11 (337421): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 19 04:17 EVNT.38776201._000844.pool.root.1 -> /data/./ATLAS.root_0
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 atlas atlas      2631 Jun 19 04:17 pandaJob.out
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas       424 Jun 19 04:17 setup.sh.local
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas   1023119 Jun 19 04:17 agis_schedconf.cvmfs.json
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas   1317943 Jun 19 04:17 cric_ddmendpoints.json
2024-06-19 11:58:11 (337421): Guest Log: drwx------. 4 atlas atlas      4096 Jun 19 04:17 pilot3
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas 355709516 Jun 19 09:56 HITS.38921007._047172.pool.root.1
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas        95 Jun 19 09:56 pilot_heartbeat.json
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas      1035 Jun 19 09:57 memory_monitor_summary.json
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas         0 Jun 19 09:57 agis_ddmendpoints.agis.ALL.json
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas    404973 Jun 19 09:57 log.38921007._047172.job.log.tgz.1
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas      7754 Jun 19 09:57 heartbeat.json
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas      4343 Jun 19 09:57 pilotlog.txt
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas   1201729 Jun 19 09:57 log.38921007._047172.job.log.1
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas       357 Jun 19 09:57 output.list
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 19 09:57 runtime_log
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas   1628160 Jun 19 09:57 result.tar.gz
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas       678 Jun 19 09:57 TAnMDmw3gd5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmtuiKDmOvIbZm.diag
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 atlas atlas     11024 Jun 19 09:57 runtime_log.err
2024-06-19 11:58:11 (337421): Guest Log: Looking for outputfile HITS.38921007._047172.pool.root.1
2024-06-19 11:58:11 (337421): Guest Log: HITS file was successfully produced
2024-06-19 11:58:11 (337421): Guest Log: -rw-------. 1 atlas atlas 355709516 Jun 19 09:56 /home/atlas/RunAtlas/HITS.38921007._047172.pool.root.1
2024-06-19 11:58:11 (337421): Guest Log: Successfully finished the ATLAS job!
2024-06-19 11:58:11 (337421): Guest Log: Copying the results back to the shared directory!
2024-06-19 11:58:11 (337421): Guest Log:  *** Contents of shared directory: ***
2024-06-19 11:58:11 (337421): Guest Log: total 573828
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 root root 585449591 Jun 19 04:16 ATLAS.root_0
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 root root      6821 Jun 19 04:16 init_data.xml
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 root root    482532 Jun 19 04:16 input.tar.gz
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 root root   1628160 Jun 19  2024 result.tar.gz
2024-06-19 11:58:11 (337421): Guest Log: -rw-r--r--. 1 root root     17537 Jun 19 04:16 start_atlas.sh
2024-06-19 11:58:11 (337421): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-19 11:58:11 (337421): VM Completion File Detected.
2024-06-19 11:58:11 (337421): Powering off VM.
2024-06-19 11:58:12 (337421): Successfully stopped VM.
2024-06-19 11:58:12 (337421): Deregistering VM. (boinc_522f8ec9118ee562, slot#0)
2024-06-19 11:58:12 (337421): Removing network bandwidth throttle group from VM.
2024-06-19 11:58:12 (337421): Removing VM from VirtualBox.
11:58:17 (337421): called boinc_finish(0)

</stderr_txt>
]]>

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